Microarray experiments to specifically-expressed genes

GSM ID GSM154508
Assay name Arabidopsis growing pollen tubes rep2
GSE experiment GSE6696: Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1983.6100.0181.5At3g19690821506pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBO.I.C.G.H.G.
1826.4100.0164.8At5g42260834231BGLU12 (BETA GLUCOSIDASE 12)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAO.I.C.G.H.G.
1524.2100.0161.4At5g20340832156BG5 (beta-1,3-glucanase 5)Encodes a putative beta 1,3-glucanase.O.I.C.G.H.G.
1510.3100.0195.1At1g67640843088lysine and histidine specific transporter, putativeF:amino acid transmembrane transporter activity, amine transmembrane transporter activity;P:amino acid transport;C:membrane;MPFOBAO.I.C.G.H.G.
1462.1100.095.8At5g35380833499protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
981.1100.0185.2At3g27410822362unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
826.8100.0116.6At3g07490819937AGD11 (ARF-GAP domain 11)A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.O.I.C.G.H.G.
798.9100.048.5At3g19940821532sugar transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAO.I.C.G.H.G.
702.2100.0223.4At1g06540837165unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
636.4100.0104.6At2g31540817712GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
605.9100.0116.6At1g24110839023peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
605.2100.094.9At3g26880822304self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
532.2100.076.6At4g26830828790catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFOO.I.C.G.H.G.
518.4100.0186.4At5g55980835696serine-rich protein-relatedF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
487.8100.0117.7At2g19040816421RALFL12 (RALF-LIKE 12)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.O.I.C.G.H.G.
475.4100.0135.4At5g46200834662unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFO.I.C.G.H.G.
464.9100.085.5At2g03840814910TET13 (TETRASPANIN13)Member of TETRASPANIN familyO.I.C.G.H.G.
416.0100.027.6At4g13190826933ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
413.8100.0125.4At3g04690819627protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
385.0100.028.0At1g61080842400proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MBOFPVAO.I.C.G.H.G.
371.1100.039.7At2g22290816761ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:mitochondrion;MOFPBVAO.I.C.G.H.G.
367.6100.096.5At4g18050827530PGP9 (P-GLYCOPROTEIN 9)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPVO.I.C.G.H.G.
346.1100.035.4At5g11820831055-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
319.6100.075.5At1g58480--O.I.C.G.H.G.
318.6100.068.0At4g13450826977universal stress protein (USP) family proteinF:molecular_function unknown;P:response to stress;C:cellular_component unknown;PO.I.C.G.H.G.
311.4100.0121.2At2g46300819238-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMO.I.C.G.H.G.
301.1100.0137.1At4g21326827882ATSBT3.12 (SUBTILASE 3.12)F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
290.3100.095.1At5g45700834609NLI interacting factor (NIF) family proteinF:phosphatase activity;P:unknown;C:unknown;MOFPVBO.I.C.G.H.G.
280.0100.0234.8At1g01310839333allergen V5/Tpx-1-related family proteinF:molecular_function unknown;P:biological_process unknown;C:extracellular region;MPFOBO.I.C.G.H.G.
264.2100.041.2At5g26100832679unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
263.1100.0214.1At3g60570825228ATEXPB5 (ARABIDOPSIS THALIANA EXPANSIN B5)member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)O.I.C.G.H.G.
261.0100.075.6At1g09600837487protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
245.4100.0338.8At5g20390832161beta-1,3-glucanase, putativeF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;POBO.I.C.G.H.G.
243.9100.051.3At5g20690832192ATP binding / kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
240.9100.045.0At2g25630817104BGLU14 (BETA GLUCOSIDASE 14)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:plant-type cell wall;BOPMFAO.I.C.G.H.G.
235.5100.049.8At4g15650827242protein kinase-relatedF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MOBFPVAO.I.C.G.H.G.
232.0100.0142.2At5g37810833759NIP4F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAVO.I.C.G.H.G.
230.8100.085.8At5g20810832204auxin-responsive protein, putative / small auxin up RNA (SAUR_B)F:calmodulin binding;P:response to auxin stimulus;C:peroxisome;POO.I.C.G.H.G.
228.8100.068.3At1g44120841015C2 domain-containing protein / armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;PMOFBAO.I.C.G.H.G.
226.6100.0181.3At4g33850829527glycosyl hydrolase family 10 proteinPseudogene of AT4G33850; glycosyl hydrolase family 10 proteinO.I.C.G.H.G.
222.0100.068.7At3g10470820211zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;OMPFBO.I.C.G.H.G.
221.4100.0192.1At1g76640843997calmodulin-related protein, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOBVO.I.C.G.H.G.
219.1100.0154.8At2g28180817364ATCHX8member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
213.9100.0128.0At1g28550839755AtRABA1i (Arabidopsis Rab GTPase homolog A1i)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVAO.I.C.G.H.G.
212.0100.0113.2At2g19050816422GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBFOMO.I.C.G.H.G.
212.0100.062.4At1g33770840268protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
211.2100.039.3At3g16130820858ROPGEF13Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.O.I.C.G.H.G.
209.6100.062.5At2g04220814959unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
197.7100.0349.5At1g23350838944invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
194.3100.0186.6At5g12180831091CPK17member of Calcium Dependent Protein KinaseO.I.C.G.H.G.
193.5100.0345.4At3g02970821168EXL6 (EXORDIUM LIKE 6)F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
193.1100.030.0At4g21323827881subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
191.4100.0369.5At2g05850815137scpl38 (serine carboxypeptidase-like 38)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBO.I.C.G.H.G.
186.1100.0501.4At5g54095835496unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OBMFPVAO.I.C.G.H.G.
185.0100.060.7At5g60740836195ATPase, coupled to transmembrane movement of substancesF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:endomembrane system, membrane;BOMFAPVO.I.C.G.H.G.
184.3100.054.7At1g04160839246XIB (MYOSIN XI B)Encodes a member of the type XI myosin protein family involved in root hair elongation.O.I.C.G.H.G.
182.1100.042.5At4g20990827846ACA4 (ALPHA CARBONIC ANHYDRASE 4)F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process;C:chloroplast thylakoid membrane;MBPOFVO.I.C.G.H.G.
177.1100.0302.0At1g30710839951FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAO.I.C.G.H.G.
174.9100.0125.5At1g49270841351protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MOBPFVAO.I.C.G.H.G.
169.4100.0340.5At3g20580821605COBL10 (COBRA-LIKE PROTEIN 10 PRECURSOR)F:unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
169.3100.030.2At1g74220843762unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFPBVO.I.C.G.H.G.
168.3100.0187.4At5g26060832675S1 self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
167.2100.084.1At2g17660816273nitrate-responsive NOI protein, putativeF:molecular_function unknown;P:response to nitrate;C:cellular_component unknown;POO.I.C.G.H.G.
166.5100.0120.3At3g18810821414protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;OMBPFVAO.I.C.G.H.G.
166.4100.0312.1At5g12000831073kinaseF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAO.I.C.G.H.G.
164.8100.0158.6At2g41860818786CPK14member of Calcium Dependent Protein KinaseO.I.C.G.H.G.
163.899.967.1At1g54280841869haloacid dehalogenase-like hydrolase family proteinF:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:phospholipid transport, ATP biosynthetic process;C:integral to membrane, membrane;MBOFPAVO.I.C.G.H.G.
162.499.942.0At5g25430832617anion exchangerF:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBVO.I.C.G.H.G.
162.099.988.4At5g19360832056CPK34member of Calcium Dependent Protein KinaseO.I.C.G.H.G.
161.999.933.6At3g15860820829unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
161.599.982.0At1g10620837605protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MOPBFVAO.I.C.G.H.G.
161.499.9274.8At3g06260819800GATL4 (Galacturonosyltransferase-like 4)Encodes a protein with putative galacturonosyltransferase activity.O.I.C.G.H.G.
160.599.966.5At5g10260830890AtRABH1e (Arabidopsis Rab GTPase homolog H1e)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBVAO.I.C.G.H.G.
160.399.9438.0At2g26450817185pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMOO.I.C.G.H.G.
157.499.9420.5At5g58170835929SVL5 (SHV3-LIKE 5)F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOMFO.I.C.G.H.G.
157.499.920.8At3g26870822303self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
156.199.9315.3At1g66210842936subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOMFAO.I.C.G.H.G.
155.999.9437.6At1g01980839296ATSEC1Amember of Reticuline oxidase-like familyO.I.C.G.H.G.
154.899.9135.2At5g45840834624leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
154.299.9250.2At5g64790836600glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFBOO.I.C.G.H.G.
153.699.9121.3At5g14890831341NHL repeat-containing proteinF:unknown;P:unknown;C:endomembrane system;BOMPAO.I.C.G.H.G.
152.799.9640.2At1g78460844182SOUL heme-binding family proteinF:binding;P:biological_process unknown;C:endomembrane system;OMPBAO.I.C.G.H.G.
152.299.946.5At5g09280830787pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:cellular_component unknown;PBFOO.I.C.G.H.G.
152.199.9450.0At3g17060820963pectinesterase family proteinF:pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO.I.C.G.H.G.
151.999.9265.2At4g39110830066protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVAO.I.C.G.H.G.
151.999.987.6At4g14810827137unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
150.999.9270.3At1g61860842483protein kinase, putativeF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
150.399.9253.1At2g44560819064AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFO.I.C.G.H.G.
150.199.9271.8At3g43120823371auxin-responsive protein-relatedF:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;POO.I.C.G.H.G.
150.099.929.7At1g77730844109pleckstrin homology (PH) domain-containing proteinF:phosphoinositide binding;P:signal transduction;C:chloroplast;MFPOO.I.C.G.H.G.
149.699.9319.4At1g25240839107epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:clathrin coat, mitochondrion;PMFBAOO.I.C.G.H.G.
148.199.9419.9At3g62180825391invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
147.699.9293.8At5g56750835777Ndr family proteinF:molecular_function unknown;P:cell differentiation;C:cellular_component unknown;MPBOO.I.C.G.H.G.
147.399.9491.0At1g70790843416C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOO.I.C.G.H.G.
145.999.935.4At2g33320817895C2 domain-containing proteinF:unknown;P:unknown;C:unknown;OMPFBAVO.I.C.G.H.G.
145.799.9130.0At2g22180816752hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBVO.I.C.G.H.G.
144.899.929.1At5g22910832355ATCHX9member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
143.599.986.9At3g52460824411hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:unknown;C:cellular_component unknown;PMOFBVAO.I.C.G.H.G.
143.499.979.9At1g65240842831aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PMFOO.I.C.G.H.G.
142.999.9180.4At1g52580841690ATRBL5 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 5)F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;BOMPFAO.I.C.G.H.G.



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