Microarray experiments to specifically-expressed genes

GSM ID GSM154507
Assay name Arabidopsis growing pollen tubes rep1
GSE experiment GSE6696: Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
2641.1100.0209.4At3g19690821506pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBO.I.C.G.H.G.
1961.3100.0170.8At5g42260834231BGLU12 (BETA GLUCOSIDASE 12)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFAO.I.C.G.H.G.
1915.3100.0258.7At3g27410822362unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
1907.5100.0180.6At5g20340832156BG5 (beta-1,3-glucanase 5)Encodes a putative beta 1,3-glucanase.O.I.C.G.H.G.
1314.8100.0139.8At3g26880822304self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
1235.2100.0142.6At3g07490819937AGD11 (ARF-GAP domain 11)A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.O.I.C.G.H.G.
1218.9100.0186.0At2g19040816421RALFL12 (RALF-LIKE 12)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.O.I.C.G.H.G.
1026.1100.080.3At5g35380833499protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
903.7100.0246.1At5g55980835696serine-rich protein-relatedF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
779.6100.0110.7At2g03840814910TET13 (TETRASPANIN13)Member of TETRASPANIN familyO.I.C.G.H.G.
586.2100.049.8At2g22290816761ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:mitochondrion;MOFPBVAO.I.C.G.H.G.
537.6100.0195.5At1g06540837165unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
516.1100.037.7At3g26870822303self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
474.6100.0109.7At4g18050827530PGP9 (P-GLYCOPROTEIN 9)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPVO.I.C.G.H.G.
472.7100.0280.7At1g76640843997calmodulin-related protein, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOBVO.I.C.G.H.G.
458.4100.0107.5At1g67640843088lysine and histidine specific transporter, putativeF:amino acid transmembrane transporter activity, amine transmembrane transporter activity;P:amino acid transport;C:membrane;MPFOBAO.I.C.G.H.G.
431.0100.052.6At5g26100832679unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
410.4100.0508.5At2g15880816084leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MPBOFVAO.I.C.G.H.G.
400.2100.0123.3At3g04690819627protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
385.2100.0201.2At4g33970829543protein binding / structural constituent of cell wallF:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MPBOFVAO.I.C.G.H.G.
369.6100.0668.2At1g49490841373leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MBPOFVAO.I.C.G.H.G.
363.5100.034.5At5g40645834064nitrate-responsive NOI protein, putativeF:molecular_function unknown;P:response to nitrate;C:cellular_component unknown;POO.I.C.G.H.G.
336.1100.0113.8At5g46200834662unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PFO.I.C.G.H.G.
332.0100.0118.6At1g69050843237unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
290.9100.056.6At4g26830828790catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFOO.I.C.G.H.G.
289.3100.064.8At4g13450826977universal stress protein (USP) family proteinF:molecular_function unknown;P:response to stress;C:cellular_component unknown;PO.I.C.G.H.G.
281.2100.0466.7At3g19020821435leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MBOPFVAO.I.C.G.H.G.
279.8100.043.3At2g385203767738transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
274.7100.0145.1At1g28550839755AtRABA1i (Arabidopsis Rab GTPase homolog A1i)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVAO.I.C.G.H.G.
263.9100.030.9At5g11820831055-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
242.8100.064.6At2g31540817712GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
240.4100.0156.2At5g02570831878histone H2B, putativeF:DNA binding;P:nucleosome assembly;C:nucleolus;MPOFO.I.C.G.H.G.
234.7100.0409.2At2g05850815137scpl38 (serine carboxypeptidase-like 38)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOBO.I.C.G.H.G.
232.3100.0654.9At4g27580828867unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, cell wall;OBMFPVAO.I.C.G.H.G.
231.4100.064.9At5g35090833460unknown proteinF:unknown;P:unknown;C:cellular_component unknown;PO.I.C.G.H.G.
221.4100.048.8At5g20690832192ATP binding / kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
220.4100.069.5At1g09600837487protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
217.4100.095.9At2g17660816273nitrate-responsive NOI protein, putativeF:molecular_function unknown;P:response to nitrate;C:cellular_component unknown;POO.I.C.G.H.G.
216.0100.0540.3At5g54095835496unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OBMFPVAO.I.C.G.H.G.
213.8100.0275.3At3g16040820849-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
212.2100.0583.6At3g25170822109RALFL26 (ralf-like 26)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.O.I.C.G.H.G.
209.3100.0293.6At3g26860822302-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
209.3100.024.8At3g19940821532sugar transporter, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAO.I.C.G.H.G.
206.5100.068.1At1g24110839023peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
202.3100.046.9At5g25430832617anion exchangerF:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBVO.I.C.G.H.G.
202.3100.037.5At3g15860820829unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
202.0100.0404.2At3g52000824363scpl36 (serine carboxypeptidase-like 36)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOO.I.C.G.H.G.
200.7100.0134.4At1g49270841351protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MOBPFVAO.I.C.G.H.G.
193.7100.0471.3At4g24640828566APPB1Encodes AppB protein (AppB1).O.I.C.G.H.G.
192.5100.0316.4At1g19500838536unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
191.8100.044.9At4g15650827242protein kinase-relatedF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MOBFPVAO.I.C.G.H.G.
191.1100.098.3At4g14810827137unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
190.5100.0107.6At5g57000835802unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBO.I.C.G.H.G.
189.1100.043.3At4g20990827846ACA4 (ALPHA CARBONIC ANHYDRASE 4)F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process;C:chloroplast thylakoid membrane;MBPOFVO.I.C.G.H.G.
186.6100.0685.6At3g26110822209-F:molecular_function unknown;P:unknown;C:anchored to membrane;PO.I.C.G.H.G.
183.9100.0171.8At1g47280841131unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
181.7100.0293.1At1g51240841547-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
180.8100.0194.3At5g26060832675S1 self-incompatibility protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
174.4100.031.9At5g22910832355ATCHX9member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
167.8100.055.6At1g33770840268protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
167.7100.0122.1At2g32460817807MYB101Member of the R2R3 factor gene family.O.I.C.G.H.G.
165.6100.0520.6At1g70790843416C2 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOO.I.C.G.H.G.
164.5100.0248.3At2g20700816598unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
164.199.9290.7At1g30710839951FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOAO.I.C.G.H.G.
162.099.9660.5At5g04180830296ACA3 (ALPHA CARBONIC ANHYDRASE 3)F:carbonate dehydratase activity, zinc ion binding;P:response to carbon dioxide, one-carbon compound metabolic process;C:endomembrane system;MBPOFO.I.C.G.H.G.
156.199.9277.2At3g43120823371auxin-responsive protein-relatedF:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;POO.I.C.G.H.G.
155.799.997.0At2g19050816422GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBFOMO.I.C.G.H.G.
153.799.9387.3At5g58050835917SVL4 (SHV3-LIKE 4)F:kinase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOMFO.I.C.G.H.G.
152.199.9736.1At1g24520839067BCP1Male fertility gene acting on tapetum and microsporeO.I.C.G.H.G.
151.799.968.8At5g45700834609NLI interacting factor (NIF) family proteinF:phosphatase activity;P:unknown;C:unknown;MOFPVBO.I.C.G.H.G.
149.999.9565.5At5g48140834866polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAO.I.C.G.H.G.
149.799.926.4At1g06750837186unknown proteinF:unknown;P:unknown;C:unknown;POBO.I.C.G.H.G.
146.899.9417.9At3g62180825391invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
143.199.9247.1At2g44560819064AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11)F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOFO.I.C.G.H.G.
142.799.9573.8At5g47000834746peroxidase, putativeF:xylan 1,4-beta-xylosidase activity, peroxidase activity;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
142.699.9335.8At2g33420817906-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
141.799.9509.0At3g62710825445glycosyl hydrolase family 3 proteinF:xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:endomembrane system;BOFPAMO.I.C.G.H.G.
141.799.971.4At2g46360819243unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
140.799.9393.8At5g15140831366aldose 1-epimerase family proteinF:aldose 1-epimerase activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;OBMFPVAO.I.C.G.H.G.
138.699.9510.7At5g50030835067invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
137.799.9461.0At2g24450816981FLA3 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR)F:molecular_function unknown;P:N-terminal protein myristoylation;C:anchored to membrane;PBMOFVAO.I.C.G.H.G.
136.499.9197.5At3g03800821141SYP131 (SYNTAXIN OF PLANTS 131)member of SYP13 Gene FamilyO.I.C.G.H.G.
135.399.9624.4At5g26700832719germin-like protein, putativeF:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PBFOAMO.I.C.G.H.G.
134.299.9386.8At3g25165822108RALFL25 (ralf-like 25)Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.O.I.C.G.H.G.
133.699.9142.8At5g46770834720unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
126.899.9516.3At4g02250827589invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
126.699.9705.6At1g10770837620invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
126.599.9243.3At5g20390832161beta-1,3-glucanase, putativeF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;POBO.I.C.G.H.G.
125.299.9463.6At3g42640823281AHA8 (Arabidopsis H(+)-ATPase 8)F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAVO.I.C.G.H.G.
125.199.918.4At4g28670828985protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
124.899.9374.5At5g58170835929SVL5 (SHV3-LIKE 5)F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to membrane;BPOMFO.I.C.G.H.G.
124.499.9104.1At5g37810833759NIP4F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFAVO.I.C.G.H.G.
124.299.925.9At1g74220843762unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFPBVO.I.C.G.H.G.
123.999.9424.1At3g05930819762GLP8 (GERMIN-LIKE PROTEIN 8)germin-like protein (GLP8)O.I.C.G.H.G.
123.099.9158.8At3g01250821184unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPO.I.C.G.H.G.
122.499.917.1At1g15990838169ATCNGC7 (CYCLIC NUCLEOTIDE GATED CHANNEL 7)member of Cyclic nucleotide gated channel familyO.I.C.G.H.G.
122.199.9325.1At2g23900816922glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOMAO.I.C.G.H.G.
121.599.9441.1At1g55560842005sks14 (SKU5 Similar 14)F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOAO.I.C.G.H.G.
119.999.9342.1At5g20410832163MGD2Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation.O.I.C.G.H.G.
119.399.9829.5At3g57690824938AGP23 (ARABINOGALACTAN-PROTEIN 23)Encodes a putative arabinogalactan-protein (AGP23).O.I.C.G.H.G.



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