Microarray experiments to specifically-expressed genes

GSM ID GSM151694
Assay name Col-0 uninoculated, biological replicate 1
GSE experiment GSE6556: Expression profiling of A. thaliana wild type Columbia-0 and mutant gh3.5-1D in response to pathogen Pst DC3000(avrRpt2)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
85.399.995.5At1g13650837926-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVAO.I.C.G.H.G.
25.599.7148.1At1g02820839304late embryogenesis abundant 3 family protein / LEA3 family proteinF:molecular_function unknown;P:embryonic development, response to stress;C:unknown;PO.I.C.G.H.G.
22.699.697.8At5g64770836598unknown proteinF:molecular_function unknown;P:unknown;C:endomembrane system;PO.I.C.G.H.G.
20.999.6167.3At5g55620835656unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
16.099.525.2At1g69523843286UbiE/COQ5 methyltransferase family proteinF:methyltransferase activity;P:metabolic process;C:chloroplast;BOFAMPO.I.C.G.H.G.
14.099.4238.3At1g66100842924thionin, putativePredicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.O.I.C.G.H.G.
14.099.444.3At1g53870841824unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
13.899.4113.6At3g61220825294short-chain dehydrogenase/reductase (SDR) family proteinF:(-)-menthol dehydrogenase activity, oxidoreductase activity, (+)-neomenthol dehydrogenase activity;P:defense response;C:plasma membrane;BOMFPAO.I.C.G.H.G.
13.599.41.2At2g16820816183transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
12.799.313.4At1g75250843862ATRL6 (ARABIDOPSIS RAD-LIKE 6)F:transcription factor activity;P:regulation of transcription;C:unknown;PMOO.I.C.G.H.G.
12.399.3189.4At5g65730836702xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeF:hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity;P:response to water deprivation;C:endomembrane system, cell wall, apoplast;PFBOO.I.C.G.H.G.
12.399.3120.1At4g38840830039auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus, response to cold;C:plasma membrane;POO.I.C.G.H.G.
11.799.3256.2At4g04020825714FIB (FIBRILLIN)Fibrillin precursor protein. The fibrillin preprotein, but not the mature protein interacts with ABI2. Regulated by abscisic acid response regulators. Involved in abscisic acid-mediated photoprotection.O.I.C.G.H.G.
11.699.3210.7At2g23590816891MES8 (METHYL ESTERASE 8)Encodes a protein shown to have carboxylesterase activity in vitro. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.O.I.C.G.H.G.
11.199.224.8At1g73870843723zinc finger (B-box type) family proteinF:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POO.I.C.G.H.G.
11.199.223.9At2g15020815991unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.099.268.6At3g44450823570unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.099.230.3At5g01790831868unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
10.799.2272.5At5g23060832370CaS (Calcium sensing receptor)F:unknown;P:unknown;C:thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast;PBOFMO.I.C.G.H.G.
10.799.2162.3At5g43850834407ARD4F:acireductone dioxygenase [iron(II)-requiring] activity, metal ion binding;P:methionine salvage;C:cellular_component unknown;PBMFOO.I.C.G.H.G.
10.799.2142.8At5g57345835840unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBOO.I.C.G.H.G.
10.699.215.4At4g38850830040SAUR15 (SMALL AUXIN UPREGULATED 15)mRNA is rapidly induced by auxin and is very short-lived. Has been used as a reporter gene in studying auxin mutants.O.I.C.G.H.G.
10.699.212.1At1g29460839822auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus;C:mitochondrion;PO.I.C.G.H.G.
10.599.2104.0At1g55960842047-F:molecular_function unknown;P:biological_process unknown;C:unknown;MPOO.I.C.G.H.G.
10.599.253.0At4g30993829225unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
10.199.291.4At2g15050815994LTPPredicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.O.I.C.G.H.G.
9.999.1127.6At1g78680844204ATGGH2 (gamma-glutamyl hydrolase 2)The Arabidopsis protein AtGGH2 is a gamma-glutamyl hydrolase acting specifically on monoglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole.O.I.C.G.H.G.
9.999.140.8At5g59080836025unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:chloroplast;PO.I.C.G.H.G.
9.899.161.9At1g14280837989PKS2 (PHYTOCHROME KINASE SUBSTRATE 2)Encodes phytochrome kinase substrate 2. PKS proteins are critical for hypocotyl phototropism.O.I.C.G.H.G.
9.699.138.4At3g26960822314unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
9.499.127.9At5g62140836334unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBOO.I.C.G.H.G.
9.399.136.7At2g03310814860unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
9.299.121.5At1g18810838463phytochrome kinase substrate-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVO.I.C.G.H.G.
8.899.021.2At5g22390832300unknown proteinF:unknown;P:unknown;C:unknown;PMOFO.I.C.G.H.G.
8.799.093.3At4g04840825821methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinF:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;BOMPFAVO.I.C.G.H.G.



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