CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM149409

Assay name Rice Azucena 0ppm Arsenate (Control) Rep3

GSE experiment GSE4471: Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. C.G. H.G. Other DB
48.7 99.9 2.2 Os01g0930500 AK107569.1 - Conserved hypothetical protein 4e-2 At2g27130 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein O.I. C.G. H.G.
46.2 99.9 12.7 Os07g0442800 AK103470.1 - Conserved hypothetical protein 3e+0 At4g04810 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein O.I. C.G. H.G.
46.1 99.9 4.4 Os09g0394600 AK065379.1 - Endonuclease/exonuclease/phosphatase familyprotein 1e-2 At3g63240 endonuclease/exonuclease/phosphatase family protein O.I. C.G. H.G.
31.4 99.7 7.6 Os02g0514500 AK064485.1 - Glycerophosphoryl diester phosphodiesterase familyprotein 9e-3 At5g43300 glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase O.I. C.G. H.G.
30.1 99.7 38.8 Os12g0203200 AK063151.1 - Hypothetical protein 1e+0 At3g24750 unknown protein O.I. C.G. H.G.
29.8 99.7 11.3 Os02g0120100 AK103704.1 - Amino acid-binding ACT domain containing protein 7e-5 At4g35780 protein kinase family protein O.I. C.G. H.G.
28.9 99.6 1.8 Os09g0431300 9637.m02277 - - 4e-5 At4g38620 MYB4 O.I. C.G. H.G.
27.7 99.6 0.7 Os02g0542500 AK109859.1 - - 5e-2 At4g21450 vesicle-associated membrane family protein / VAMP family protein O.I. C.G. H.G.
27.5 99.6 1.7 Os07g0638500 AK108983.1 - - 8e+0 Atmg01370 - O.I. C.G. H.G.
27.1 99.6 6.1 Os04g0186400 AF416722.1 - Phosphate transporter 6 5e-22 At2g32830 PHT5 O.I. C.G. H.G.
25.6 99.5 5.8 Os04g0627300 9632.m05198 - Conserved hypothetical protein 3e-2 At5g60680 unknown protein O.I. C.G. H.G.
24.8 99.5 1.2 Os04g0674800 AK119913.1 - Cellulase (Fragment) 1e+0 At1g02800 ATCEL2 O.I. C.G. H.G.
24.8 99.5 0.7 Os04g0604900 AK059203.1 - Xyloglucan endotransglycosylase (Fragment) 2e-10 At5g57540 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative O.I. C.G. H.G.
24.4 99.4 4.9 Os10g0328100 NM_195728.1 - Conserved hypothetical protein 2e-1 At2g23310 ATRER1C1 O.I. C.G. H.G.
23.7 99.4 0.6 Os11g0225000 AK062328.1 - Serine/threonine protein kinase domain containingprotein 1e+0 At5g13900 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein O.I. C.G. H.G.
22.4 99.3 30.6 Os03g0365800 AK063672.1 - Lipolytic enzyme, G-D-S-L family protein 1e-2 At1g28640 GDSL-motif lipase, putative O.I. C.G. H.G.
21.7 99.2 0.7 Os11g0151700 AK073222.1 - Purple acid phosphatase 2e-5 At3g52820 PAP22 (PURPLE ACID PHOSPHATASE 22) O.I. C.G. H.G.
21.4 99.2 0.0 Os01g0383200 9629.m02740 - - 7e-1 At5g58940 CRCK1 (CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1) O.I. C.G. H.G.
20.8 99.2 6.0 Os04g0669100 AK103123.1 - Conserved hypothetical protein 6e-1 At1g04985 unknown protein O.I. C.G. H.G.
20.4 99.1 14.4 Os01g0371500 AK062937.1 - Glutathione-S-transferase 19E50 7e-3 At4g02520 ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2) O.I. C.G. H.G.
20.1 99.1 7.3 Os05g0213900 9633.m01095 - Hypothetical protein 1e-1 At5g60680 unknown protein O.I. C.G. H.G.
20.0 99.1 1.6 Os10g0490100 AK102387.1 - Barwin-related endoglucanase domain containingprotein 6e+0 At4g24026 unknown protein O.I. C.G. H.G.
19.4 99.0 17.6 Os01g0216000 AK058429.1 - Lipolytic enzyme, G-D-S-L family protein 8e-4 At4g09840 unknown protein O.I. C.G. H.G.
19.2 99.0 1.2 Os11g0514800 AK064017.1 - Hypothetical protein 4e-3 At5g14020 - O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.
48.7	99.9	2.2	Os01g0930500	AK107569.1	-	Conserved hypothetical protein	4e-2	At2g27130	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.
46.2	99.9	12.7	Os07g0442800	AK103470.1	-	Conserved hypothetical protein	3e+0	At4g04810	methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein	O.I.	C.G.	H.G.
46.1	99.9	4.4	Os09g0394600	AK065379.1	-	Endonuclease/exonuclease/phosphatase familyprotein	1e-2	At3g63240	endonuclease/exonuclease/phosphatase family protein	O.I.	C.G.	H.G.
31.4	99.7	7.6	Os02g0514500	AK064485.1	-	Glycerophosphoryl diester phosphodiesterase familyprotein	9e-3	At5g43300	glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase	O.I.	C.G.	H.G.
30.1	99.7	38.8	Os12g0203200	AK063151.1	-	Hypothetical protein	1e+0	At3g24750	unknown protein	O.I.	C.G.	H.G.
29.8	99.7	11.3	Os02g0120100	AK103704.1	-	Amino acid-binding ACT domain containing protein	7e-5	At4g35780	protein kinase family protein	O.I.	C.G.	H.G.
28.9	99.6	1.8	Os09g0431300	9637.m02277	-	-	4e-5	At4g38620	MYB4	O.I.	C.G.	H.G.
27.7	99.6	0.7	Os02g0542500	AK109859.1	-	-	5e-2	At4g21450	vesicle-associated membrane family protein / VAMP family protein	O.I.	C.G.	H.G.
27.5	99.6	1.7	Os07g0638500	AK108983.1	-	-	8e+0	Atmg01370	-	O.I.	C.G.	H.G.
27.1	99.6	6.1	Os04g0186400	AF416722.1	-	Phosphate transporter 6	5e-22	At2g32830	PHT5	O.I.	C.G.	H.G.
25.6	99.5	5.8	Os04g0627300	9632.m05198	-	Conserved hypothetical protein	3e-2	At5g60680	unknown protein	O.I.	C.G.	H.G.
24.8	99.5	1.2	Os04g0674800	AK119913.1	-	Cellulase (Fragment)	1e+0	At1g02800	ATCEL2	O.I.	C.G.	H.G.
24.8	99.5	0.7	Os04g0604900	AK059203.1	-	Xyloglucan endotransglycosylase (Fragment)	2e-10	At5g57540	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	O.I.	C.G.	H.G.
24.4	99.4	4.9	Os10g0328100	NM_195728.1	-	Conserved hypothetical protein	2e-1	At2g23310	ATRER1C1	O.I.	C.G.	H.G.
23.7	99.4	0.6	Os11g0225000	AK062328.1	-	Serine/threonine protein kinase domain containingprotein	1e+0	At5g13900	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.
22.4	99.3	30.6	Os03g0365800	AK063672.1	-	Lipolytic enzyme, G-D-S-L family protein	1e-2	At1g28640	GDSL-motif lipase, putative	O.I.	C.G.	H.G.
21.7	99.2	0.7	Os11g0151700	AK073222.1	-	Purple acid phosphatase	2e-5	At3g52820	PAP22 (PURPLE ACID PHOSPHATASE 22)	O.I.	C.G.	H.G.
21.4	99.2	0.0	Os01g0383200	9629.m02740	-	-	7e-1	At5g58940	CRCK1 (CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1)	O.I.	C.G.	H.G.
20.8	99.2	6.0	Os04g0669100	AK103123.1	-	Conserved hypothetical protein	6e-1	At1g04985	unknown protein	O.I.	C.G.	H.G.
20.4	99.1	14.4	Os01g0371500	AK062937.1	-	Glutathione-S-transferase 19E50	7e-3	At4g02520	ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2)	O.I.	C.G.	H.G.
20.1	99.1	7.3	Os05g0213900	9633.m01095	-	Hypothetical protein	1e-1	At5g60680	unknown protein	O.I.	C.G.	H.G.
20.0	99.1	1.6	Os10g0490100	AK102387.1	-	Barwin-related endoglucanase domain containingprotein	6e+0	At4g24026	unknown protein	O.I.	C.G.	H.G.
19.4	99.0	17.6	Os01g0216000	AK058429.1	-	Lipolytic enzyme, G-D-S-L family protein	8e-4	At4g09840	unknown protein	O.I.	C.G.	H.G.
19.2	99.0	1.2	Os11g0514800	AK064017.1	-	Hypothetical protein	4e-3	At5g14020	-	O.I.	C.G.	H.G.

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GSM ID	GSM149409
Assay name	Rice Azucena 0ppm Arsenate (Control) Rep3
GSE experiment	GSE4471: Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate

Microarray experiments to specifically-expressed genes

GSM ID GSM149409 Assay name Rice Azucena 0ppm Arsenate (Control) Rep3 GSE experiment GSE4471: Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate

GSM ID GSM149409

Assay name Rice Azucena 0ppm Arsenate (Control) Rep3

GSE experiment GSE4471: Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate