Microarray experiments to specifically-expressed genes

GSM ID GSM147948
Assay name Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 1
GSE experiment GSE6414: Expression data from soybean seed compartments with embryos at the globular stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
321.6100.029.7Gma.10763.1.S1_atAW567704--2e-6At5g12020HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)O.I.C.G.H.G.
282.4100.010.8GmaAffx.82507.1.S1_s_atBM091650--2e-4At3g59680unknown proteinO.I.C.G.H.G.
255.2100.00.0Gma.11106.1.S1_a_atBU549106MADS-box protein GmNMH7-1e-1At3g57390AGL18O.I.C.G.H.G.
243.9100.00.5GmaAffx.43679.1.A1_atAW102271--9e-1At3g10020unknown proteinO.I.C.G.H.G.
239.8100.053.1Gma.7761.2.S1_atCD404694--7e+0At5g05330DNA bindingO.I.C.G.H.G.
235.7100.023.7Gma.11881.1.A1_atAW433203--3e+0At1g34047-O.I.C.G.H.G.
215.7100.08.7GmaAffx.45432.1.S1_atBG650794--6e-1At2g29525-O.I.C.G.H.G.
210.9100.04.0GmaAffx.90284.1.S1_s_atCF806009--7e-2At3g21360electron carrier/ oxidoreductaseO.I.C.G.H.G.
176.9100.00.1GmaAffx.89772.9.A1_atCK606208--1e-1At1g72150PATL1 (PATELLIN 1)O.I.C.G.H.G.
174.8100.03.6Gma.9548.2.A1_atCD395161--2e-1At1g66230MYB20 (myb domain protein 20)O.I.C.G.H.G.
166.5100.043.1Gma.5599.1.A1_atBM139473--3e+0At1g11450nodulin MtN21 family proteinO.I.C.G.H.G.
159.6100.024.1GmaAffx.69976.1.S1_atBU761143--3e+0At5g07225zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
159.3100.034.4Gma.5345.1.S1_atBG404916--3e+0At3g60560unknown proteinO.I.C.G.H.G.
150.3100.010.1GmaAffx.2310.1.A1_atAI736226--7e-1At4g22745MBD1O.I.C.G.H.G.
149.8100.00.3Gma.5321.1.S1_atBM091707--2e+0At3g27100-O.I.C.G.H.G.
143.6100.021.7Gma.12802.1.A1_atCD390757--2e+0At3g29639-O.I.C.G.H.G.
142.1100.00.9GmaAffx.7093.2.S1_atBU083586--1e+1At5g59840Ras-related GTP-binding family proteinO.I.C.G.H.G.
141.7100.084.7GmaAffx.19742.1.A1_atBU544339--4e+0At4g02170unknown proteinO.I.C.G.H.G.
141.0100.079.8Gma.3030.1.S1_s_atCD397432--1e-23At5g28640AN3 (ANGUSTIFOLIA 3)O.I.C.G.H.G.
139.0100.023.9Gma.8822.1.A1_s_atBI970193--6e-2At3g12870unknown proteinO.I.C.G.H.G.
132.8100.088.1GmaAffx.55121.1.A1_atBI970422--7e-1At3g10990F-box family proteinO.I.C.G.H.G.
132.3100.030.8GmaAffx.7093.1.S1_atBM092487--3e-21At3g58780SHP1 (SHATTERPROOF 1)O.I.C.G.H.G.
129.7100.03.8Gma.17142.1.S1_atBE023321--6e-1At5g10230ANNAT7 (ANNEXIN ARABIDOPSIS 7)O.I.C.G.H.G.
128.3100.011.1GmaAffx.48725.1.S1_atAW733493--8e-1At5g22608unknown proteinO.I.C.G.H.G.
123.4100.027.1Gma.12334.1.A1_s_atBI702139--5e-5At3g13227serine-rich protein-relatedO.I.C.G.H.G.
122.5100.042.1GmaAffx.74165.1.S1_atBQ611537--3e-9At3g12050Aha1 domain-containing proteinO.I.C.G.H.G.
121.9100.00.1GmaAffx.26719.1.A1_atBE822503--1e+1Atmg01000-O.I.C.G.H.G.
120.3100.02.7GmaAffx.1301.54.S1_atAW459278--1e+0At5g66090unknown proteinO.I.C.G.H.G.
118.6100.01.9GmaAffx.15268.1.S1_atBU760812--6e-5At5g06839bZIP family transcription factorO.I.C.G.H.G.
118.5100.04.6Gma.8476.1.S1_atAF308859.1FAS2-3e-7At5g64630FAS2 (FASCIATA 2)O.I.C.G.H.G.
118.2100.010.9GmaAffx.54278.1.S1_atBG154611--2e+1At3g27999enzyme inhibitor/ pectinesteraseO.I.C.G.H.G.
116.5100.00.6Gma.10787.1.S1_a_atBG650304--2e+0At3g23040unknown proteinO.I.C.G.H.G.
116.2100.0168.1GmaAffx.12928.1.S1_atBE823098--5e-40At5g65360histone H3O.I.C.G.H.G.
114.3100.035.7Gma.16134.1.A1_s_atCD416389--4e+0At5g24770VSP2 (VEGETATIVE STORAGE PROTEIN 2)O.I.C.G.H.G.
112.5100.02.3GmaAffx.38493.1.A1_atCD391838--3e+0At3g55520immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putativeO.I.C.G.H.G.
112.5100.00.0HgAffx.11209.1.S1_atCB935241--5e+0At5g17100-O.I.C.G.H.G.
112.2100.00.3GmaAffx.74933.1.S1_atCA935084--6e-2At1g01300aspartyl protease family proteinO.I.C.G.H.G.
111.8100.02.9Gma.17135.1.S1_atBE022564--3e-1At3g54210ribosomal protein L17 family proteinO.I.C.G.H.G.
111.5100.02.6GmaAffx.39479.1.A1_atBE802645--3e-1At4g18280glycine-rich cell wall protein-relatedO.I.C.G.H.G.
109.6100.01.5GmaAffx.45999.1.A1_atBI969944--7e-1At4g17590-O.I.C.G.H.G.
109.6100.00.4Gma.10787.2.S1_a_atBE023083--2e-1At1g62790protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
108.1100.01.1GmaAffx.66526.1.A1_atBE657346--1e+1At5g60820zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
106.8100.030.7GmaAffx.3222.1.S1_atBE023934--6e+0At1g04870PRMT10O.I.C.G.H.G.
106.2100.01.9GmaAffx.25969.1.A1_atBU545131--1e+0At1g80100AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6)O.I.C.G.H.G.
106.2100.01.3GmaAffx.29653.1.A1_atCD412652--1e-1At5g47880ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1)O.I.C.G.H.G.
105.6100.00.6GmaAffx.85381.1.S1_atAW471785--5e-1At1g52970unknown proteinO.I.C.G.H.G.
104.5100.00.3GmaAffx.45991.1.A1_atBI969588--1e+1At4g11040protein phosphatase 2C, putative / PP2C, putativeO.I.C.G.H.G.
104.1100.00.8Gma.12819.1.A1_atCD391420--3e+0At4g23271unknown proteinO.I.C.G.H.G.
103.6100.012.3Gma.14235.1.A1_atBI969186--3e+0At4g14420lesion inducing protein-relatedO.I.C.G.H.G.
103.6100.01.0Gma.13863.1.A1_atCA851116--5e+0At5g58560phosphatidate cytidylyltransferase family proteinO.I.C.G.H.G.
103.0100.00.1Gma.13923.1.A1_atCD410343--2e+0At5g61750cupin family proteinO.I.C.G.H.G.
102.7100.02.5GmaAffx.79804.1.S1_atAI938431--3e+0At2g17850-O.I.C.G.H.G.
102.2100.013.6Gma.15844.1.A1_atCD399488--4e-1At5g63250glycosyl hydrolase family protein 17O.I.C.G.H.G.
102.2100.013.0GmaAffx.90947.1.S1_atCF806672--8e-2At3g22120CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN)O.I.C.G.H.G.
101.1100.06.3GmaAffx.1045.1.A1_atBU549585--9e-20At3g57880C2 domain-containing proteinO.I.C.G.H.G.
100.6100.019.5Gma.5205.1.A1_atBI970186--2e-5At5g35740glycosyl hydrolase family protein 17O.I.C.G.H.G.
100.1100.0152.5Gma.6760.1.S1_atBU544178--1e-42At4g09960STK (SEEDSTICK)O.I.C.G.H.G.
99.6100.03.7Gma.4169.1.S1_atBQ473559--1e-9At4g39700heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedO.I.C.G.H.G.
99.1100.052.0Gma.16885.1.S1_atAW570537--4e-31At3g45980HTB9O.I.C.G.H.G.
97.4100.010.7GmaAffx.52897.1.A1_atAW349402--4e-2At1g76180ERD14 (EARLY RESPONSE TO DEHYDRATION 14)O.I.C.G.H.G.
97.3100.01.1GmaAffx.29593.1.A1_atCD399844--5e-7At1g10780F-box family proteinO.I.C.G.H.G.
97.3100.01.1GmaAffx.58562.1.A1_atBE823246--7e-1At5g54210NLI interacting factor (NIF) family proteinO.I.C.G.H.G.
97.0100.08.1Gma.17844.1.S1_atBM307334--2e+0At2g28755UDP-D-glucuronate carboxy-lyase-relatedO.I.C.G.H.G.
96.7100.00.3GmaAffx.75119.1.A1_atCD412533--4e-2At3g13950unknown proteinO.I.C.G.H.G.
96.4100.00.3GmaAffx.18770.1.S1_atBI972454--7e-11At2g45700sterile alpha motif (SAM) domain-containing proteinO.I.C.G.H.G.
95.8100.0148.8Gma.1379.2.A1_atCD409927--2e+0At1g29179-O.I.C.G.H.G.
95.5100.06.0Gma.8742.1.A1_atBU926120--1e+1At5g07680ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80)O.I.C.G.H.G.
95.5100.00.3GmaAffx.58577.1.A1_atBE824305--7e-1At1g67480kelch repeat-containing F-box family proteinO.I.C.G.H.G.
95.4100.02.3GmaAffx.55946.1.S1_atBQ628642--5e-1At1g02910LPA1 (LOW PSII ACCUMULATION1)O.I.C.G.H.G.
95.0100.011.3Gma.6574.1.S1_atBQ628332--4e-1At5g11420-O.I.C.G.H.G.
94.7100.092.7Gma.16606.2.S1_a_atAW396382--3e+0At5g05380PRA1.B3 (PRENYLATED RAB ACCEPTOR 1.B3)O.I.C.G.H.G.
94.1100.01.9GmaAffx.44900.1.S1_atBF066396Dof28-3e+0At5g23840MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.C.G.H.G.
93.7100.00.6Gma.13396.1.A1_atCD407597--3e+0At3g47140F-box family protein-relatedO.I.C.G.H.G.
92.5100.010.4GmaAffx.42228.1.S1_atBQ610340--2e-4At1g80740CMT1 (CHROMOMETHYLASE 1)O.I.C.G.H.G.
91.3100.05.9Gma.13036.1.S1_atCD393069inducer of CBF expression 1 /// inducer of CBF expression 4-1e-23At3g26744ICE1 (INDUCER OF CBF EXPRESSION 1)O.I.C.G.H.G.
90.3100.00.2Gma.17328.1.S1_atAW568111--7e-1At4g12940unknown proteinO.I.C.G.H.G.
89.0100.01.3Gma.13929.1.A1_atCD410470--2e-1At1g23790unknown proteinO.I.C.G.H.G.
88.2100.033.2Gma.13259.1.A1_a_atBU545412MYB transcription factor MYB172-2e-5At1g01380ETC1 (ENHANCER OF TRY AND CPC 1)O.I.C.G.H.G.
88.1100.00.0PsAffx.C244000012_atPsAffx.C244000012--4e-1At1g10140-O.I.C.G.H.G.
87.7100.08.0GmaAffx.773.1.S1_atCA935337--4e-11At5g13290CRN (CORYNE)O.I.C.G.H.G.
87.4100.01.0GmaAffx.11214.1.A1_atCD413632--2e-1At4g38790ER lumen protein retaining receptor family proteinO.I.C.G.H.G.
87.0100.04.9Gma.13849.1.A1_atCD407923--3e+0At5g16023RTFL18 (ROTUNDIFOLIA LIKE 18)O.I.C.G.H.G.
86.7100.04.3Gma.12710.1.A1_atCD395311--7e-1At5g61000replication protein, putativeO.I.C.G.H.G.
86.3100.00.0PsAffx.C366000005_atPsAffx.C366000005--8e+0At5g28720unknown proteinO.I.C.G.H.G.
86.2100.083.2GmaAffx.88676.1.A1_atCD411430--4e+0At5g63440unknown proteinO.I.C.G.H.G.
85.8100.01.4GmaAffx.27438.1.S1_atAW102238--4e-2At1g60060unknown proteinO.I.C.G.H.G.
85.1100.09.1GmaAffx.16425.1.A1_atAW348865--4e-36At3g27060TSO2 (TSO meaning 'ugly' in Chinese)O.I.C.G.H.G.
85.0100.01.4Gma.12125.1.S1_atAW099549--8e-1At4g14785SCRL23 (SCR-Like 23)O.I.C.G.H.G.
85.0100.00.1GmaAffx.61528.1.A1_atCD418158--3e+0At3g06035unknown proteinO.I.C.G.H.G.
83.3100.00.0GmaAffx.65223.1.A1_atBU544126--1e+0At2g32487unknown proteinO.I.C.G.H.G.
83.2100.018.7GmaAffx.25965.1.S1_atAW706815--9e+0At5g15220ribosomal protein L27 family proteinO.I.C.G.H.G.
82.7100.00.7GmaAffx.15174.1.S1_atBU547723--2e-2At5g02950PWWP domain-containing proteinO.I.C.G.H.G.
82.6100.01.2GmaAffx.90254.1.S1_atCF805979--1e-25At5g65360histone H3O.I.C.G.H.G.
82.4100.012.4Gma.2007.1.A1_atAW309398--4e+0At5g38090unknown proteinO.I.C.G.H.G.
82.0100.019.0GmaAffx.50221.1.S1_atBI315890--2e+0At1g52880NAM (NO APICAL MERISTEM)O.I.C.G.H.G.
81.7100.0115.3Gma.9164.1.S1_atCA802402--2e-26At3g46320histone H4O.I.C.G.H.G.
80.7100.07.9Gma.4824.1.S1_atBI892480--9e-13At5g60690REV (REVOLUTA)O.I.C.G.H.G.
79.8100.00.8GmaAffx.54716.1.S1_s_atBI699590--1e-5At4g26660-O.I.C.G.H.G.
78.4100.00.1GmaAffx.34081.1.A1_atCD417036--7e-1At5g37570pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.H.G.
77.5100.05.9GmaAffx.27192.1.S1_atBE823286--9e-15At3g07800thymidine kinase, putativeO.I.C.G.H.G.



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