Microarray experiments to specifically-expressed genes

GSM ID GSM147945
Assay name Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 1
GSE experiment GSE6414: Expression data from soybean seed compartments with embryos at the globular stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
677.7100.0517.2GmaAffx.29461.1.S1_atBE658695--1e+0At1g15010unknown proteinO.I.C.G.H.G.
654.6100.00.1GmaAffx.79549.1.A1_atCD407965--9e+0At5g41650lactoylglutathione lyase family protein / glyoxalase I family proteinO.I.C.G.H.G.
628.1100.012.7Gma.13028.1.A1_atCD396328--1e+1At5g59280APUM16 (Arabidopsis Pumilio 16)O.I.C.G.H.G.
565.6100.0565.6Gma.1679.1.A1_atCD395442--5e-3At3g24250glycine-rich proteinO.I.C.G.H.G.
541.6100.00.0HgAffx.2559.2.S1_atCK348890--2e+0At5g60510undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family proteinO.I.C.G.H.G.
538.2100.00.0PsAffx.C22000025_atPsAffx.C22000025--1e-2At4g26110NAP1O.I.C.G.H.G.
534.9100.00.0HgAffx.20415.1.S1_atBI749338--7e-1At2g18990TXND9 (THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG)O.I.C.G.H.G.
528.6100.00.0PsAffx.C112000051_atPsAffx.C112000051--1e-1At2g25630BGLU14 (BETA GLUCOSIDASE 14)O.I.C.G.H.G.
494.2100.00.4PsAffx.CL356Contig1_atPsAffx.CL356Contig1--2e+0At5g11070unknown proteinO.I.C.G.H.G.
493.7100.022.5Gma.10763.1.S1_atAW567704--2e-6At5g12020HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)O.I.C.G.H.G.
481.3100.0369.2Gma.1379.2.A1_atCD409927--2e+0At1g29179-O.I.C.G.H.G.
477.8100.0158.7Gma.13903.1.A1_atCD405372--7e-1At3g56010unknown proteinO.I.C.G.H.G.
453.1100.00.0PsAffx.psZO009iH06r_atPsAffx.psZO009iH06r--4e+0At2g36180calmodulin-related protein, putativeO.I.C.G.H.G.
437.1100.02.3GmaAffx.22784.1.S1_atAW101036--2e+0At5g3974060S ribosomal protein L5 (RPL5B)O.I.C.G.H.G.
433.3100.0631.1GmaAffx.54479.2.A1_s_atCD405056--1e-2At4g09610GASA2 (GAST1 PROTEIN HOMOLOG 2)O.I.C.G.H.G.
419.1100.02.1GmaAffx.71308.2.A1_atAW569888--8e-1At5g11500unknown proteinO.I.C.G.H.G.
417.7100.00.0HgAffx.15333.1.A1_atCB281661--4e+0At3g45275-O.I.C.G.H.G.
415.2100.00.0HgAffx.9435.1.S1_atCB379066--1e+0Atmg01110-O.I.C.G.H.G.
410.4100.01.7GmaAffx.78482.1.S1_atBQ133996--3e+0At3g22560GCN5-related N-acetyltransferase (GNAT) family proteinO.I.C.G.H.G.
405.6100.0229.5GmaAffx.65929.1.A1_s_atCD414557--7e-1At3g17510CIPK1 (CBL-INTERACTING PROTEIN KINASE 1)O.I.C.G.H.G.
395.3100.00.0PsAffx.C4000182_atPsAffx.C4000182--1e+0At4g11870unknown proteinO.I.C.G.H.G.
367.0100.00.0PsAffx.C16000057_atPsAffx.C16000057--2e+0At2g43810small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putativeO.I.C.G.H.G.
364.8100.0348.4GmaAffx.70258.1.S1_s_atCA802518flavanone 3-hydroxylase-9e+0At4g33460ATNAP13O.I.C.G.H.G.
361.3100.00.0HgAffx.12757.1.S1_atCB375225--9e-1At2g28370-O.I.C.G.H.G.
355.8100.00.0Psojae_rRNA_1070_RC_atPsojae_rRNA_1070_RC--5e+0At5g55690MADS-box protein (AGL47)O.I.C.G.H.G.
348.8100.02.1GmaAffx.29653.1.A1_atCD412652--1e-1At5g47880ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1)O.I.C.G.H.G.
335.5100.00.0PsAffx.C45000028_atPsAffx.C45000028--6e-1At1g14740unknown proteinO.I.C.G.H.G.
321.7100.00.0PsAffx.CL572Contig1_atPsAffx.CL572Contig1--2e+0At3g03370-O.I.C.G.H.G.
317.3100.021.8Gma.10701.2.S1_atAW101512--4e+0At3g32130-O.I.C.G.H.G.
309.6100.00.4Gma.5902.1.S1_atBQ610302--8e-1At3g17190unknown proteinO.I.C.G.H.G.
302.7100.054.3GmaAffx.5510.1.S1_atBQ079740--8e-1At3g07340basic helix-loop-helix (bHLH) family proteinO.I.C.G.H.G.
302.3100.00.0PsAffx.C185000011_atPsAffx.C185000011--1e+1At5g62770unknown proteinO.I.C.G.H.G.
293.7100.00.1GmaAffx.15275.1.S1_atBE057136--1e-2At3g55790unknown proteinO.I.C.G.H.G.
288.8100.00.2Gma.1135.1.S1_atBQ253738--4e+0At4g37685unknown proteinO.I.C.G.H.G.
286.5100.012.6Gma.4565.1.S1_s_atBI968013--4e-1At5g42190ASK2 (ARABIDOPSIS SKP1-LIKE 2)O.I.C.G.H.G.
280.2100.00.0PsAffx.C93000005_atPsAffx.C93000005--1e+0At1g65720unknown proteinO.I.C.G.H.G.
275.3100.00.0GmaAffx.21274.1.S1_atAW704202--2e-1At3g24590PLSP1 (plastidic type I signal peptidase 1)O.I.C.G.H.G.
273.4100.00.0PsAffx.C36000040_atPsAffx.C36000040--4e-3At1g02065SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)O.I.C.G.H.G.
267.9100.00.0HgAffx.13110.1.S1_x_atCD747883--2e+1At5g22570WRKY38O.I.C.G.H.G.
266.0100.00.0PsAffx.C156000030_atPsAffx.C156000030--2e-1At1g47970unknown proteinO.I.C.G.H.G.
262.9100.00.0PsAffx.C155000004_atPsAffx.C155000004--6e-1At5g24270SOS3 (SALT OVERLY SENSITIVE 3)O.I.C.G.H.G.
259.4100.00.0PsAffx.CL1532Contig1_atPsAffx.CL1532Contig1--2e+0At1g47250PAF2O.I.C.G.H.G.
257.1100.00.1GmaAffx.25006.1.A1_atCD401834--7e-1At5g12060self-incompatibility protein-relatedO.I.C.G.H.G.
252.7100.01.3GmaAffx.33143.1.S1_atBQ612337--1e+0At4g28950ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)O.I.C.G.H.G.
249.1100.00.0HgAffx.15037.1.S1_atCB375286--6e-2At5g66000unknown proteinO.I.C.G.H.G.
248.1100.01.5GmaAffx.65471.1.S1_atBU925937--4e-1At2g18160ATBZIP2 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 2)O.I.C.G.H.G.
232.4100.012.8GmaAffx.24792.1.S1_atCA819334--3e-2At5g45830DOG1 (DELAY OF GERMINATION 1)O.I.C.G.H.G.
231.9100.00.0PsAffx.C239000016_atPsAffx.C239000016--7e+0At5g04170calcium-binding EF hand family proteinO.I.C.G.H.G.
230.4100.00.1Gma.9089.1.A1_atBU544319--9e-8At4g19640ARA7O.I.C.G.H.G.
230.1100.00.0PsAffx.C352000005_atPsAffx.C352000005--5e-1Atmg01090-O.I.C.G.H.G.
229.6100.00.0PsAffx.C1456000001_atPsAffx.C1456000001--5e+0At5g62065lipid bindingO.I.C.G.H.G.
228.1100.042.3Gma.13259.1.A1_a_atBU545412MYB transcription factor MYB172-2e-5At1g01380ETC1 (ENHANCER OF TRY AND CPC 1)O.I.C.G.H.G.
227.4100.03.0GmaAffx.12714.1.A1_atBE658291--2e+0At2g35090unknown proteinO.I.C.G.H.G.
219.8100.00.0PsAffx.C52000028_atPsAffx.C52000028--5e+0At5g26330plastocyanin-like domain-containing protein / mavicyanin, putativeO.I.C.G.H.G.
219.1100.00.0Gma.7348.1.A1_atBU547106--1e+0At4g09012-O.I.C.G.H.G.
215.0100.012.8GmaAffx.91365.1.S1_atCF807090--4e+0At5g54745DegP protease familyO.I.C.G.H.G.
212.0100.00.0PsAffx.psZS006xK11f_s_atPsAffx.psZS006xK11f--3e-1At1g10200WLIM1O.I.C.G.H.G.
211.7100.00.1GmaAffx.91436.1.S1_atCF807161--8e-1At5g02540short-chain dehydrogenase/reductase (SDR) family proteinO.I.C.G.H.G.
209.3100.0257.8GmaAffx.66317.1.S1_atAW185309--7e+0At4g26160ACHT1 (ATYPICAL CYS HIS RICH THIOREDOXIN 1)O.I.C.G.H.G.
208.8100.027.5GmaAffx.69311.1.S1_atAW620208--4e-16At5g59720HSP18.2 (heat shock protein 18.2)O.I.C.G.H.G.
208.8100.00.0PsAffx.C158000026_atPsAffx.C158000026--1e+1At5g13070MSF1-like family proteinO.I.C.G.H.G.
207.8100.016.7Gma.13636.1.A1_atCD402097--2e-1At5g24100leucine-rich repeat transmembrane protein kinase, putativeO.I.C.G.H.G.
206.2100.06.2GmaAffx.60751.1.S1_atBE610338--1e+1At5g18160F-box family proteinO.I.C.G.H.G.
206.0100.0239.7GmaAffx.89191.1.S1_s_atCK606438--1e-20At3g0852060S ribosomal protein L41 (RPL41D)O.I.C.G.H.G.
205.8100.013.2Gma.16828.1.A1_x_atAF047051.1ribosomal protein L41-3e-15At3g5602060S ribosomal protein L41 (RPL41G)O.I.C.G.H.G.
205.6100.00.0PsAffx.psMA011xM09f_atPsAffx.psMA011xM09f--3e-4At1g24310unknown proteinO.I.C.G.H.G.
201.2100.00.0Gma.9463.1.S1_atCA819159--3e+0At5g57450XRCC3O.I.C.G.H.G.
197.4100.00.0PsAffx.psHB030xD23f_s_atPsAffx.psHB030xD23f--2e+0At5g01900WRKY62O.I.C.G.H.G.
194.6100.00.0HgAffx.13312.1.S1_atCB374670--2e-5At4g13940MEE58 (MATERNAL EFFECT EMBRYO ARREST 58)O.I.C.G.H.G.
193.2100.00.7Gma.12819.1.A1_atCD391420--3e+0At4g23271unknown proteinO.I.C.G.H.G.
189.6100.00.0HgAffx.24237.1.S1_atBF013612--4e+0At3g21371unknown proteinO.I.C.G.H.G.
187.4100.00.1GmaAffx.41491.1.A1_atAW733370--1e+0At5g23550-O.I.C.G.H.G.
185.4100.00.1GmaAffx.90364.1.S1_atCF806089--6e+0At3g22950ATARFC1 (ADP-ribosylation factor C1)O.I.C.G.H.G.
183.8100.00.0HgAffx.11499.1.S1_atCB934951--1e+0At3g57110unknown proteinO.I.C.G.H.G.
183.1100.00.0HgAffx.14569.1.S1_atCB299571--2e+0At4g08039-O.I.C.G.H.G.
183.0100.00.0PsAffx.C66000076_atPsAffx.C66000076--2e-1At3g13960AtGRF5 (GROWTH-REGULATING FACTOR 5)O.I.C.G.H.G.
181.9100.0818.1Gma.5323.1.A1_s_atCD402653--4e-41At5g59690histone H4O.I.C.G.H.G.
180.1100.0420.3soybean_rRNA_1721_RC_atsoybean_rRNA_1721_RC--1e+0At3g56290unknown proteinO.I.C.G.H.G.
179.2100.0428.8GmaAffx.92641.1.S1_s_atCF808366--6e+0At3g55920peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putativeO.I.C.G.H.G.
179.1100.00.0PsAffx.C100000009_atPsAffx.C100000009--7e-1At5g64400-O.I.C.G.H.G.
178.4100.00.2GmaAffx.49458.2.S1_atAW596887--7e-1At1g07930elongation factor 1-alpha / EF-1-alphaO.I.C.G.H.G.
176.3100.00.0GmaAffx.71795.1.A1_s_atBE440369--3e+0At5g02110CYCD7O.I.C.G.H.G.
176.3100.00.0HgAffx.21973.1.S1_atBI451585--2e-2At4g38130HD1 (HISTONE DEACETYLASE 1)O.I.C.G.H.G.
175.4100.01.5Gma.6303.2.S1_atAI437633--0At5g62700TUB3O.I.C.G.H.G.
174.8100.0314.0Gma.15760.1.S1_atBE823195--4e-50At1g09200histone H3O.I.C.G.H.G.
174.3100.01.2GmaAffx.33361.1.S1_atBU090994--9e-1At3g48580xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeO.I.C.G.H.G.
174.2100.00.0HgAffx.1311.1.S1_atCK351380--3e+0At2g24550unknown proteinO.I.C.G.H.G.
172.1100.00.1GmaAffx.12367.1.A1_atBE059153--3e+0At4g01680MYB55 (myb domain protein 55)O.I.C.G.H.G.
171.9100.00.0HgAffx.16940.2.S1_atCB279417--5e+0At5g35090unknown proteinO.I.C.G.H.G.
171.6100.00.0GmaAffx.87854.1.S1_atBU080958--3e+0At1g14870-O.I.C.G.H.G.
171.2100.00.9GmaAffx.8293.1.S1_atBE821929--6e-6At1g52540protein kinase, putativeO.I.C.G.H.G.
170.4100.00.0PsAffx.C15000103_atPsAffx.C15000103--6e-1At5g56880unknown proteinO.I.C.G.H.G.
169.3100.0270.5Gma.5909.1.S1_atAW348400--6e-52At5g59690histone H4O.I.C.G.H.G.
167.5100.00.0GmaAffx.76494.3.A1_atBE659970--2e-16At1g24260SEP3 (SEPALLATA3)O.I.C.G.H.G.
167.4100.01.6GmaAffx.29347.1.S1_atCA802338--7e-1At1g70840MLP31 (MLP-LIKE PROTEIN 31)O.I.C.G.H.G.
167.3100.00.0PsAffx.C5000130_atPsAffx.C5000130--2e+0At4g12390PME1 (PECTIN METHYLESTERASE INHIBITOR 1)O.I.C.G.H.G.
165.1100.00.0HgAffx.3143.1.A1_atCK351245--2e+0At1g59722unknown proteinO.I.C.G.H.G.
163.1100.00.0PsAffx.C38000019_atPsAffx.C38000019--2e-1At2g02061unknown proteinO.I.C.G.H.G.
161.5100.00.4Gma.14154.1.A1_atCD416538--1e+1At5g18037DNA bindingO.I.C.G.H.G.
161.1100.00.1GmaAffx.34081.1.A1_atCD417036--7e-1At5g37570pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage