Microarray experiments to specifically-expressed genes

GSM ID	GSM147940
Assay name	Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 2
GSE experiment	GSE6414: Expression data from soybean seed compartments with embryos at the globular stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
845.5	100.0	156.7	GmaAffx.80413.1.A1_at	AW620950	-	-	7e-1	At4g36090	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	C.G.	H.G.	Please select
810.7	100.0	154.6	GmaAffx.11662.1.S1_at	BU764260	-	-	6e-2	At3g13500	unknown protein	O.I.	C.G.	H.G.	Please select
741.5	100.0	381.3	GmaAffx.90967.1.S1_s_at	CF806692	-	-	2e-75	Atmg00030	-	O.I.	C.G.	H.G.	Please select
609.4	100.0	0.6	GmaAffx.45991.1.A1_at	BI969588	-	-	1e+1	At4g11040	protein phosphatase 2C, putative / PP2C, putative	O.I.	C.G.	H.G.	Please select
490.4	100.0	109.7	GmaAffx.10631.1.S1_at	BU760887	-	-	4e+0	At2g34850	MEE25 (maternal effect embryo arrest 25)	O.I.	C.G.	H.G.	Please select
394.6	100.0	40.7	Gma.17504.1.S1_at	BF595106	-	-	2e-1	At5g55200	co-chaperone grpE protein, putative	O.I.	C.G.	H.G.	Please select
391.4	100.0	199.3	Gma.6781.1.S1_at	BU764071	-	-	5e-2	At5g40490	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	H.G.	Please select
382.3	100.0	0.0	PsAffx.CL546Contig1_at	PsAffx.CL546Contig1	-	-	1e+0	At5g28300	trihelix DNA-binding protein, putative	O.I.	C.G.	H.G.	Please select
381.3	100.0	1051.8	soybean_rRNA_666_at	soybean_rRNA_666	-	-	5e+0	At5g25475	DNA binding	O.I.	C.G.	H.G.	Please select
372.3	100.0	112.3	Gma.12483.1.A1_at	CD393502	-	-	6e-1	At1g67950	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	H.G.	Please select
370.6	100.0	36.5	Gma.13629.1.A1_at	CD402075	-	-	2e-1	At4g23910	unknown protein	O.I.	C.G.	H.G.	Please select
368.3	100.0	69.5	GmaAffx.2585.1.S1_at	BE822002	-	-	9e-1	At5g40690	-	O.I.	C.G.	H.G.	Please select
363.2	100.0	1165.7	soybean_rRNA_637_at	soybean_rRNA_637	-	-	5e+0	At3g01920	yrdC family protein	O.I.	C.G.	H.G.	Please select
359.7	100.0	973.1	GmaAffx.1301.14.S1_s_at	BE822937	-	-	5e+0	At5g50440	MEMB12 (MEMBRIN 12)	O.I.	C.G.	H.G.	Please select
354.3	100.0	4.8	Gma.2759.1.S1_at	CD408283	-	-	3e-6	At5g13980	glycosyl hydrolase family 38 protein	O.I.	C.G.	H.G.	Please select
352.6	100.0	12.7	Gma.14415.1.A1_at	AI856147	-	-	5e-10	At4g36810	GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1)	O.I.	C.G.	H.G.	Please select
348.0	100.0	9.7	GmaAffx.20974.1.S1_at	AW307000	-	-	6e-1	At2g34770	FAH1 (FATTY ACID HYDROXYLASE 1)	O.I.	C.G.	H.G.	Please select
339.2	100.0	4.1	GmaAffx.9844.1.S1_at	BM522926	-	-	8e-1	At5g02260	ATEXPA9 (ARABIDOPSIS THALIANA EXPANSIN A9)	O.I.	C.G.	H.G.	Please select
333.8	100.0	2100.6	soybean_rRNA_808_at	soybean_rRNA_808	-	-	5e+0	At5g09711	unknown protein	O.I.	C.G.	H.G.	Please select
333.4	100.0	42.7	Gma.17294.1.A1_at	AW310775	-	-	9e-1	At4g24290	-	O.I.	C.G.	H.G.	Please select
331.7	100.0	0.5	GmaAffx.89210.1.A1_s_at	CK606540	-	-	3e-57	At3g53020	STV1 (SHORT VALVE1)	O.I.	C.G.	H.G.	Please select
328.9	100.0	0.1	GmaAffx.17324.1.S1_at	BE800373	-	-	4e+0	At3g58100	PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5)	O.I.	C.G.	H.G.	Please select
327.5	100.0	0.4	Gma.13668.1.S1_at	CD403018	-	-	6e-2	At3g01327	-	O.I.	C.G.	H.G.	Please select
319.9	100.0	16.7	soybean_rRNA_274_RC_at	soybean_rRNA_274_RC	-	-	2e+1	At2g16955	unknown protein	O.I.	C.G.	H.G.	Please select
318.3	100.0	391.3	GmaAffx.43343.2.S1_s_at	BI945998	-	-	2e+0	At4g27130	eukaryotic translation initiation factor SUI1, putative	O.I.	C.G.	H.G.	Please select
313.4	100.0	0.7	Gma.2292.2.S1_at	BQ297915	-	-	2e-143	At5g28840	GME (GDP-D-MANNOSE 3',5'-EPIMERASE)	O.I.	C.G.	H.G.	Please select
298.9	100.0	0.4	GmaAffx.4102.1.S1_at	BG156690	-	-	1e+1	At1g21140	nodulin, putative	O.I.	C.G.	H.G.	Please select
296.6	100.0	1098.9	soybean_rRNA_1021_at	soybean_rRNA_1021	-	-	2e+1	At4g01895	systemic acquired resistance (SAR) regulator protein NIMIN-1-related	O.I.	C.G.	H.G.	Please select
289.0	100.0	14.0	Gma.14699.1.A1_at	CD401069	-	-	2e-1	At3g18035	HON4	O.I.	C.G.	H.G.	Please select
287.0	100.0	120.4	soybean_rRNA_274_at	soybean_rRNA_274	-	-	2e+1	At2g16955	unknown protein	O.I.	C.G.	H.G.	Please select
286.0	100.0	788.1	GmaAffx.88935.1.A1_s_at	CK605567	-	-	4e+0	At4g17615	CBL1 (CALCINEURIN B-LIKE PROTEIN 1)	O.I.	C.G.	H.G.	Please select
283.9	100.0	1.6	GmaAffx.60785.1.A1_at	BU546986	-	-	3e-1	At5g48953	LCR86 (Low-molecular-weight cysteine-rich 86)	O.I.	C.G.	H.G.	Please select
283.6	100.0	10.8	Gma.1025.1.S1_at	BE661296	-	-	2e+0	At1g11970	-	O.I.	C.G.	H.G.	Please select
278.3	100.0	29.8	Gma.14167.1.A1_at	CD416718	-	-	3e+0	At4g05320	UBQ10 (POLYUBIQUITIN 10)	O.I.	C.G.	H.G.	Please select
275.3	100.0	0.6	GmaAffx.51480.1.S1_at	BQ629445	-	-	3e+0	At3g51660	macrophage migration inhibitory factor family protein / MIF family protein	O.I.	C.G.	H.G.	Please select
275.3	100.0	0.2	GmaAffx.11116.1.A1_s_at	CD393163	MYB transcription factor MYB166	-	3e+0	At5g02160	unknown protein	O.I.	C.G.	H.G.	Please select
273.8	100.0	166.7	soybean_rRNA_637_RC_at	soybean_rRNA_637_RC	-	-	5e+0	At3g01920	yrdC family protein	O.I.	C.G.	H.G.	Please select
273.4	100.0	94.9	soybean_rRNA_808_RC_at	soybean_rRNA_808_RC	-	-	5e+0	At5g09711	unknown protein	O.I.	C.G.	H.G.	Please select
272.0	100.0	0.0	PsAffx.C270000013_at	PsAffx.C270000013	-	-	6e+0	At5g02580	unknown protein	O.I.	C.G.	H.G.	Please select
266.1	100.0	0.0	GmaAffx.11206.1.A1_at	CD412213	-	-	8e-7	At2g15390	FUT4	O.I.	C.G.	H.G.	Please select
265.7	100.0	1717.7	soybean_rRNA_349_at	soybean_rRNA_349	-	-	5e+0	At4g11140	CRF1 (CYTOKININ RESPONSE FACTOR 1)	O.I.	C.G.	H.G.	Please select
261.4	100.0	0.1	GmaAffx.66589.1.S1_at	BE821501	-	-	1e+0	At5g20470	myosin, putative	O.I.	C.G.	H.G.	Please select
260.0	100.0	113.9	GmaAffx.22396.1.S1_at	BF597175	-	-	3e+0	At5g11320	YUC4 (YUCCA4)	O.I.	C.G.	H.G.	Please select
252.7	100.0	3.7	GmaAffx.90967.1.A1_s_at	CF806692	-	-	2e-75	Atmg00030	-	O.I.	C.G.	H.G.	Please select
245.1	100.0	456.9	GmaAffx.89772.42.S1_x_at	CK606038	-	-	5e+0	At5g56070	unknown protein	O.I.	C.G.	H.G.	Please select
244.8	100.0	0.0	GmaAffx.68286.1.A1_at	BG839255	-	-	2e-1	At4g30670	unknown protein	O.I.	C.G.	H.G.	Please select
244.6	100.0	641.3	soybean_rRNA_692_at	soybean_rRNA_692	-	-	5e+0	At2g41750	DTW domain-containing protein	O.I.	C.G.	H.G.	Please select
238.4	100.0	977.8	soybean_rRNA_485_at	soybean_rRNA_485	-	-	2e+1	At5g50801	unknown protein	O.I.	C.G.	H.G.	Please select
236.4	100.0	2.6	GmaAffx.88725.1.S1_at	CK605999	-	-	1e-18	At4g29390	40S ribosomal protein S30 (RPS30B)	O.I.	C.G.	H.G.	Please select
234.4	100.0	124.6	soybean_rRNA_1021_RC_at	soybean_rRNA_1021_RC	-	-	2e+1	At4g01895	systemic acquired resistance (SAR) regulator protein NIMIN-1-related	O.I.	C.G.	H.G.	Please select
230.5	100.0	51.7	soybean_rRNA_918_at	soybean_rRNA_918	-	-	5e+0	At5g48657	defense protein-related	O.I.	C.G.	H.G.	Please select
229.3	100.0	71.2	soybean_rRNA_718_RC_at	soybean_rRNA_718_RC	-	-	2e+1	At1g07350	transformer serine/arginine-rich ribonucleoprotein, putative	O.I.	C.G.	H.G.	Please select
226.4	100.0	5.2	GmaAffx.2310.1.A1_at	AI736226	-	-	7e-1	At4g22745	MBD1	O.I.	C.G.	H.G.	Please select
226.3	100.0	0.7	Gma.13863.1.A1_at	CA851116	-	-	5e+0	At5g58560	phosphatidate cytidylyltransferase family protein	O.I.	C.G.	H.G.	Please select
225.7	100.0	165.3	GmaAffx.10629.1.S1_s_at	BU760664	-	-	2e+0	At3g08010	ATAB2	O.I.	C.G.	H.G.	Please select
224.6	100.0	0.0	PsAffx.C110000015_at	PsAffx.C110000015	-	-	2e-2	At1g78172	unknown protein	O.I.	C.G.	H.G.	Please select
221.1	100.0	7.7	Gma.17026.1.A1_at	BE820770	-	-	2e-1	At4g10850	nodulin MtN3 family protein	O.I.	C.G.	H.G.	Please select
218.1	100.0	0.0	PsAffx.psMA011xE16f_at	PsAffx.psMA011xE16f	-	-	2e+1	At4g16750	DRE-binding transcription factor, putative	O.I.	C.G.	H.G.	Please select
217.8	100.0	1481.3	soybean_rRNA_776_at	soybean_rRNA_776	-	-	5e+0	At5g06410	DNAJ heat shock N-terminal domain-containing protein	O.I.	C.G.	H.G.	Please select
214.2	100.0	24.6	GmaAffx.21250.1.S1_at	AW598021	-	-	7e-1	At1g03630	POR C (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE)	O.I.	C.G.	H.G.	Please select
211.9	100.0	482.6	soybean_rRNA_1479_at	soybean_rRNA_1479	-	-	1e+0	At3g48490	unknown protein	O.I.	C.G.	H.G.	Please select
209.2	100.0	0.0	Gma.17039.1.S1_at	BE058128	-	-	9e+0	At5g04800	40S ribosomal protein S17 (RPS17D)	O.I.	C.G.	H.G.	Please select
207.5	100.0	0.2	GmaAffx.30405.1.S1_at	AW703688	-	-	8e-1	At5g64905	PROPEP3 (Elicitor peptide 3 precursor)	O.I.	C.G.	H.G.	Please select
205.6	100.0	0.0	GmaAffx.14766.1.S1_at	BQ134104	-	-	8e-1	At4g12130	aminomethyltransferase	O.I.	C.G.	H.G.	Please select
203.2	100.0	0.0	PsAffx.C124000020_s_at	PsAffx.C124000020	-	-	7e-1	At3g04880	DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2)	O.I.	C.G.	H.G.	Please select
199.4	100.0	0.0	PsAffx.psML005xN16f_at	PsAffx.psML005xN16f	-	-	4e+0	At3g20900	unknown protein	O.I.	C.G.	H.G.	Please select
198.9	100.0	0.2	HgAffx.13471.3.S1_at	CB825409	-	-	1e+0	At2g36020	HVA22J (HVA22-LIKE PROTEIN J)	O.I.	C.G.	H.G.	Please select
196.8	100.0	3.5	soybean_rRNA_1352_at	soybean_rRNA_1352	-	-	5e+0	At5g02520	-	O.I.	C.G.	H.G.	Please select
193.3	100.0	0.0	PsAffx.C410000008_at	PsAffx.C410000008	-	-	5e-1	At5g42780	AtHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27)	O.I.	C.G.	H.G.	Please select
192.8	100.0	868.5	GmaAffx.89786.1.A1_s_at	CK605840	-	-	7e+0	At5g09711	unknown protein	O.I.	C.G.	H.G.	Please select
190.7	100.0	4018.7	soybean_rRNA_1721_at	soybean_rRNA_1721	-	-	1e+0	At3g56290	unknown protein	O.I.	C.G.	H.G.	Please select
187.1	100.0	1964.1	soybean_rRNA_1665_at	soybean_rRNA_1665	-	-	2e-2	At3g50390	transducin family protein / WD-40 repeat family protein	O.I.	C.G.	H.G.	Please select
185.8	100.0	0.1	GmaAffx.82290.1.S1_at	BI788421	-	-	2e-1	At4g03165	unknown protein	O.I.	C.G.	H.G.	Please select
185.4	100.0	0.0	PsAffx.C22000089_s_at	PsAffx.C22000089	-	-	4e-1	At1g12060	ATBAG5 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 5)	O.I.	C.G.	H.G.	Please select
185.1	100.0	0.0	PsAffx.C14000032_s_at	PsAffx.C14000032	-	-	1e+1	At2g26880	AGL41 (AGAMOUS-LIKE 41)	O.I.	C.G.	H.G.	Please select
184.1	100.0	123.8	soybean_rRNA_1531_RC_at	soybean_rRNA_1531_RC	-	-	3e-1	At3g22450	structural constituent of ribosome	O.I.	C.G.	H.G.	Please select
179.9	100.0	0.0	HgAffx.21123.1.S1_at	CB280363	-	-	7e+0	At4g02200	drought-responsive family protein	O.I.	C.G.	H.G.	Please select
178.9	100.0	1291.3	Gma.17620.1.S1_s_at	AI736755	-	-	2e+1	At5g67490	unknown protein	O.I.	C.G.	H.G.	Please select
178.7	100.0	0.0	GmaAffx.35128.1.S1_at	BE022667	-	-	8e-1	At1g29790	-	O.I.	C.G.	H.G.	Please select
177.7	100.0	0.1	PsAffx.psHB005xL12f_at	PsAffx.psHB005xL12f	-	-	9e-8	At2g01021	unknown protein	O.I.	C.G.	H.G.	Please select
173.6	100.0	0.1	GmaAffx.45511.1.S1_at	BG352094	-	-	2e-11	At1g03780	targeting protein-related	O.I.	C.G.	H.G.	Please select
173.1	100.0	0.0	PsAffx.C38000054_at	PsAffx.C38000054	-	-	5e+0	At5g60910	AGL8 (agamous-like 8)	O.I.	C.G.	H.G.	Please select
172.6	100.0	0.2	GmaAffx.34470.1.S1_at	AW185011	-	-	3e+0	At1g11765	S1 self-incompatibility protein-related	O.I.	C.G.	H.G.	Please select
171.2	100.0	138.6	GmaAffx.89191.1.S1_s_at	CK606438	-	-	1e-20	At3g08520	60S ribosomal protein L41 (RPL41D)	O.I.	C.G.	H.G.	Please select
170.4	100.0	2.9	Gma.15121.1.S1_at	CD414921	-	-	5e-14	At3g03900	adenylylsulfate kinase, putative	O.I.	C.G.	H.G.	Please select
170.0	100.0	663.1	GmaAffx.34785.1.S1_s_at	AW310421	-	-	2e-2	At1g62940	ACOS5 (ACYL-COA SYNTHETASE 5)	O.I.	C.G.	H.G.	Please select
169.8	100.0	172.4	soybean_rRNA_218_at	soybean_rRNA_218	-	-	1e+0	At5g16760	inositol 1,3,4-trisphosphate 5/6-kinase	O.I.	C.G.	H.G.	Please select
167.1	100.0	0.2	GmaAffx.13479.1.S1_at	BG509056	-	-	3e+0	At5g60810	unknown protein	O.I.	C.G.	H.G.	Please select
166.9	100.0	0.4	GmaAffx.92915.1.S1_at	CF808640	-	-	6e+0	At4g35785	nucleic acid binding / nucleotide binding	O.I.	C.G.	H.G.	Please select
166.8	100.0	0.0	Gma.2337.3.A1_at	AW733242	-	-	4e+0	At5g42410	auxin-responsive family protein	O.I.	C.G.	H.G.	Please select
166.4	100.0	0.0	HgAffx.13784.1.S1_at	CB378031	-	-	5e+0	At5g05530	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.	Please select
162.7	100.0	1.7	Gma.174.1.A1_at	X62303.1	mitotic cyclin	-	2e-3	At3g11520	CYCB1	O.I.	C.G.	H.G.	Please select
162.5	100.0	0.0	HgAffx.10833.1.S1_at	CB935580	-	-	2e-1	At5g43700	ATAUX2-11 (AUXIN INDUCIBLE 2-11)	O.I.	C.G.	H.G.	Please select
159.4	100.0	1832.2	soybean_rRNA_838_at	soybean_rRNA_838	-	-	1e+0	At4g27700	rhodanese-like domain-containing protein	O.I.	C.G.	H.G.	Please select
159.4	100.0	63.2	soybean_rRNA_1692_RC_at	soybean_rRNA_1692_RC	-	-	2e+1	Atmg00030	-	O.I.	C.G.	H.G.	Please select
159.1	100.0	2044.8	soybean_rRNA_1692_at	soybean_rRNA_1692	-	-	2e+1	Atmg00030	-	O.I.	C.G.	H.G.	Please select
158.9	100.0	0.0	PsAffx.C2000255_at	PsAffx.C2000255	-	-	1e+0	At1g10470	ARR4 (RESPONSE REGULATOR 4)	O.I.	C.G.	H.G.	Please select
157.5	100.0	8.3	Gma.14319.1.A1_at	BI968921	-	-	3e+0	At3g17980	C2 domain-containing protein	O.I.	C.G.	H.G.	Please select
156.9	100.0	1599.2	GmaAffx.89665.1.A1_s_at	CK606059	-	-	5e+0	At3g17350	unknown protein	O.I.	C.G.	H.G.	Please select
154.9	100.0	8.9	Gma.17068.1.S1_at	BE822432	-	-	1e+0	At4g27030	small conjugating protein ligase	O.I.	C.G.	H.G.	Please select

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