Microarray experiments to specifically-expressed genes

GSM ID GSM147939
Assay name Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 1
GSE experiment GSE6414: Expression data from soybean seed compartments with embryos at the globular stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
1037.2100.0133.3Gma.14167.1.A1_atCD416718--3e+0At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.C.G.H.G.
1022.1100.054.2GmaAffx.22204.1.A1_atBU548024--3e-1At5g06380unknown proteinO.I.C.G.H.G.
883.6100.00.4GmaAffx.22031.1.A1_atAW760018--8e-11At1g47530ripening-responsive protein, putativeO.I.C.G.H.G.
754.4100.0466.3GmaAffx.90967.1.S1_s_atCF806692--2e-75Atmg00030-O.I.C.G.H.G.
741.1100.0169.9GmaAffx.11662.1.S1_atBU764260--6e-2At3g13500unknown proteinO.I.C.G.H.G.
691.9100.0348.9soybean_rRNA_274_atsoybean_rRNA_274--2e+1At2g16955unknown proteinO.I.C.G.H.G.
577.5100.014.5GmaAffx.47078.1.A1_atBU544660--4e+0At1g24577unknown proteinO.I.C.G.H.G.
557.4100.01.0GmaAffx.89210.1.A1_s_atCK606540--3e-57At3g53020STV1 (SHORT VALVE1)O.I.C.G.H.G.
554.1100.0125.6GmaAffx.2585.1.S1_atBE822002--9e-1At5g40690-O.I.C.G.H.G.
515.8100.05.7GmaAffx.22031.1.S1_atBE802017--3e-4At5g38030MATE efflux family proteinO.I.C.G.H.G.
460.2100.09.9soybean_rRNA_1352_atsoybean_rRNA_1352--5e+0At5g02520-O.I.C.G.H.G.
456.1100.00.7Gma.13668.1.S1_atCD403018--6e-2At3g01327-O.I.C.G.H.G.
441.1100.00.3GmaAffx.25553.1.S1_atBE822372--1e+0At2g03740late embryogenesis abundant domain-containing protein / LEA domain-containing proteinO.I.C.G.H.G.
439.3100.067.7Gma.17294.1.A1_atAW310775--9e-1At4g24290-O.I.C.G.H.G.
425.9100.094.9GmaAffx.80413.1.A1_atAW620950--7e-1At4g36090oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.C.G.H.G.
413.4100.07.2GmaAffx.90967.1.A1_s_atCF806692--2e-75Atmg00030-O.I.C.G.H.G.
406.4100.0109.3GmaAffx.10631.1.S1_atBU760887--4e+0At2g34850MEE25 (maternal effect embryo arrest 25)O.I.C.G.H.G.
388.3100.00.6GmaAffx.4102.1.S1_atBG156690--1e+1At1g21140nodulin, putativeO.I.C.G.H.G.
356.3100.00.1GmaAffx.60970.1.S1_atBU764011--1e+1At5g51105unknown proteinO.I.C.G.H.G.
349.0100.0515.8GmaAffx.43343.2.S1_s_atBI945998--2e+0At4g27130eukaryotic translation initiation factor SUI1, putativeO.I.C.G.H.G.
344.3100.010.4Gma.1104.1.S1_atAW101582cytosolic glutamine synthetase gamma2-3e-89At5g37600ATGSR1O.I.C.G.H.G.
336.1100.00.3GmaAffx.16403.1.S1_atAW311467--2e+0At3g28130nodulin MtN21 family proteinO.I.C.G.H.G.
329.8100.06.8GmaAffx.79762.1.S1_atBU544064--4e-8At4g33490aspartic-type endopeptidaseO.I.C.G.H.G.
322.9100.00.3PsAffx.psHB005xL12f_atPsAffx.psHB005xL12f--9e-8At2g01021unknown proteinO.I.C.G.H.G.
322.9100.00.1Gma.13775.1.A1_atCD416571--2e-1At3g48185unknown proteinO.I.C.G.H.G.
315.3100.01045.6soybean_rRNA_666_atsoybean_rRNA_666--5e+0At5g25475DNA bindingO.I.C.G.H.G.
314.0100.014.4Gma.1025.1.S1_atBE661296--2e+0At1g11970-O.I.C.G.H.G.
313.5100.038.8Gma.17504.1.S1_atBF595106--2e-1At5g55200co-chaperone grpE protein, putativeO.I.C.G.H.G.
302.5100.00.0GmaAffx.34660.1.A1_atAW351111--6e-1At4g02450glycine-rich proteinO.I.C.G.H.G.
295.1100.02293.3soybean_rRNA_349_atsoybean_rRNA_349--5e+0At4g11140CRF1 (CYTOKININ RESPONSE FACTOR 1)O.I.C.G.H.G.
293.0100.034.7Gma.13629.1.A1_atCD402075--2e-1At4g23910unknown proteinO.I.C.G.H.G.
292.2100.00.3GmaAffx.91370.1.S1_atCF807095--1e-6At3g42180catalytic/ transferase, transferring glycosyl groupsO.I.C.G.H.G.
288.7100.0164.7Gma.15487.1.S1_atD63781.1epoxide hydrolase-5e-8At2g26740ATSEH (Arabidopsis thaliana soluble epoxide hydrolase)O.I.C.G.H.G.
284.9100.031.1Gma.4.1.S1_atX81460.1glutamine synthetase-4e-42At5g37600ATGSR1O.I.C.G.H.G.
284.3100.00.0PsAffx.C12000048_atPsAffx.C12000048--4e-3At5g63650SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5)O.I.C.G.H.G.
278.8100.01374.4soybean_rRNA_485_atsoybean_rRNA_485--2e+1At5g50801unknown proteinO.I.C.G.H.G.
266.4100.027.7Gma.5278.1.S1_atBM091901--2e-4At5g59030COPT1 (copper transporter 1)O.I.C.G.H.G.
260.9100.03.0GmaAffx.14150.1.S1_atBM095099--5e-1At1g48920ATNUC-L1O.I.C.G.H.G.
251.3100.0817.1GmaAffx.1301.14.S1_s_atBE822937--5e+0At5g50440MEMB12 (MEMBRIN 12)O.I.C.G.H.G.
249.6100.0826.9GmaAffx.88935.1.A1_s_atCK605567--4e+0At4g17615CBL1 (CALCINEURIN B-LIKE PROTEIN 1)O.I.C.G.H.G.
247.3100.025.4GmaAffx.14150.1.S1_x_atBM095099--5e-1At1g48920ATNUC-L1O.I.C.G.H.G.
244.6100.01850.5soybean_rRNA_808_atsoybean_rRNA_808--5e+0At5g09711unknown proteinO.I.C.G.H.G.
241.6100.00.0PsAffx.C7000140_atPsAffx.C7000140--6e+0At5g26262unknown proteinO.I.C.G.H.G.
238.9100.015.0soybean_rRNA_274_RC_atsoybean_rRNA_274_RC--2e+1At2g16955unknown proteinO.I.C.G.H.G.
234.0100.0902.8soybean_rRNA_637_atsoybean_rRNA_637--5e+0At3g01920yrdC family proteinO.I.C.G.H.G.
230.3100.0168.6soybean_rRNA_637_RC_atsoybean_rRNA_637_RC--5e+0At3g01920yrdC family proteinO.I.C.G.H.G.
229.8100.00.0GmaAffx.72357.1.S1_atBF424779--2e+0At2g07215unknown proteinO.I.C.G.H.G.
227.0100.0621.6soybean_rRNA_1479_atsoybean_rRNA_1479--1e+0At3g48490unknown proteinO.I.C.G.H.G.
227.0100.031.4GmaAffx.21250.1.S1_atAW598021--7e-1At1g03630POR C (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE)O.I.C.G.H.G.
223.5100.00.3GmaAffx.45991.1.A1_atBI969588--1e+1At4g11040protein phosphatase 2C, putative / PP2C, putativeO.I.C.G.H.G.
223.1100.09.7Gma.14415.1.A1_atAI856147--5e-10At4g36810GGPS1 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1)O.I.C.G.H.G.
218.4100.0257.0GmaAffx.88970.1.A1_atCK605713--7e+0At5g15190unknown proteinO.I.C.G.H.G.
215.2100.058.0soybean_rRNA_918_atsoybean_rRNA_918--5e+0At5g48657defense protein-relatedO.I.C.G.H.G.
209.9100.00.0PsAffx.C69000087_atPsAffx.C69000087--4e-1At3g58990aconitase C-terminal domain-containing proteinO.I.C.G.H.G.
208.1100.00.5Gma.2292.2.S1_atBQ297915--2e-143At5g28840GME (GDP-D-MANNOSE 3',5'-EPIMERASE)O.I.C.G.H.G.
202.8100.0203.1soybean_rRNA_1531_atsoybean_rRNA_1531--3e-1At3g22450structural constituent of ribosomeO.I.C.G.H.G.
201.0100.00.0PsAffx.C45000028_atPsAffx.C45000028--6e-1At1g14740unknown proteinO.I.C.G.H.G.
198.9100.02.9Gma.283.1.S1_atAW397627--5e-2At1g30020unknown proteinO.I.C.G.H.G.
192.5100.0431.2GmaAffx.89772.42.S1_x_atCK606038--5e+0At5g56070unknown proteinO.I.C.G.H.G.
184.4100.00.1GmaAffx.75940.1.S1_atAW706687--9e+0At5g65330AGL78 (AGAMOUS-LIKE 78)O.I.C.G.H.G.
181.4100.075.7soybean_rRNA_808_RC_atsoybean_rRNA_808_RC--5e+0At5g09711unknown proteinO.I.C.G.H.G.
181.0100.01.8GmaAffx.88970.1.S1_atCK605713--7e+0At5g15190unknown proteinO.I.C.G.H.G.
179.7100.07.1soybean_rRNA_218_RC_atsoybean_rRNA_218_RC--1e+0At5g16760inositol 1,3,4-trisphosphate 5/6-kinaseO.I.C.G.H.G.
179.4100.0798.9soybean_rRNA_1021_atsoybean_rRNA_1021--2e+1At4g01895systemic acquired resistance (SAR) regulator protein NIMIN-1-relatedO.I.C.G.H.G.
175.6100.03.1GmaAffx.60237.1.S1_atBM567800--2e-4At5g23570SGS3 (SUPPRESSOR OF GENE SILENCING 3)O.I.C.G.H.G.
175.3100.00.1GmaAffx.81855.1.S1_atBG650634--6e+0At4g25720QC (GLUTAMINYL CYCLASE)O.I.C.G.H.G.
174.0100.00.0Gma.7820.1.A1_atBU550452--1e+0At1g68610unknown proteinO.I.C.G.H.G.
173.1100.0211.2soybean_rRNA_218_atsoybean_rRNA_218--1e+0At5g16760inositol 1,3,4-trisphosphate 5/6-kinaseO.I.C.G.H.G.
172.9100.00.0PsAffx.C197000012_atPsAffx.C197000012--1e+0At5g5265040S ribosomal protein S10 (RPS10C)O.I.C.G.H.G.
172.5100.00.0PsAffx.C767000001_s_atPsAffx.C767000001--8e-1At1g54215proline-rich family proteinO.I.C.G.H.G.
171.4100.00.0GmaAffx.17324.1.S1_atBE800373--4e+0At3g58100PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5)O.I.C.G.H.G.
170.2100.02.8GmaAffx.17477.1.A1_atBE821824--2e+0At3g5870060S ribosomal protein L11 (RPL11B)O.I.C.G.H.G.
162.7100.00.9GmaAffx.89210.2.A1_atCK606470--5e-62At3g53020STV1 (SHORT VALVE1)O.I.C.G.H.G.
162.4100.01328.2soybean_rRNA_776_atsoybean_rRNA_776--5e+0At5g06410DNAJ heat shock N-terminal domain-containing proteinO.I.C.G.H.G.
162.0100.00.1GmaAffx.48338.1.S1_atAW279026--3e+0At1g68340unknown proteinO.I.C.G.H.G.
160.8100.00.5GmaAffx.92915.1.S1_atCF808640--6e+0At4g35785nucleic acid binding / nucleotide bindingO.I.C.G.H.G.
158.5100.00.0GmaAffx.83119.1.S1_atBQ298488--3e+0At3g56950SIP2O.I.C.G.H.G.
157.2100.0495.5soybean_rRNA_692_atsoybean_rRNA_692--5e+0At2g41750DTW domain-containing proteinO.I.C.G.H.G.
156.6100.00.3GmaAffx.90971.1.S1_atCF806696--1e-62Atmg01080-O.I.C.G.H.G.
156.5100.01.4GmaAffx.875.3.S1_s_atAW759142MET mRNA for type 2 metallothionein-1e+0At5g02380MT2B (METALLOTHIONEIN 2B)O.I.C.G.H.G.
156.0100.010.8Gma.17068.1.S1_atBE822432--1e+0At4g27030small conjugating protein ligaseO.I.C.G.H.G.
155.4100.00.0PsAffx.C66000027_atPsAffx.C66000027--9e-2At1g36940unknown proteinO.I.C.G.H.G.
154.9100.02.0GmaAffx.88725.1.S1_atCK605999--1e-18At4g2939040S ribosomal protein S30 (RPS30B)O.I.C.G.H.G.
154.3100.03.2GmaAffx.1061.1.S1_atBU544040--2e-5At5g49120senescence-associated protein-relatedO.I.C.G.H.G.
152.3100.01.3GmaAffx.83891.1.S1_atBE058069--6e+0At2g21980unknown proteinO.I.C.G.H.G.
149.8100.00.0PsAffx.psZS004xD23f_atPsAffx.psZS004xD23f--4e+0At1g29420-O.I.C.G.H.G.
149.5100.00.2HgAffx.13471.3.S1_atCB825409--1e+0At2g36020HVA22J (HVA22-LIKE PROTEIN J)O.I.C.G.H.G.
147.4100.01.9GmaAffx.92859.1.S1_atCF808584--1e+0At1g51920unknown proteinO.I.C.G.H.G.
146.3100.00.0PsAffx.C1024000002_atPsAffx.C1024000002--1e+0At5g02220unknown proteinO.I.C.G.H.G.
144.9100.00.4GmaAffx.91075.1.A1_atCF807672--2e-34At3g1678060S ribosomal protein L19 (RPL19B)O.I.C.G.H.G.
144.0100.03.0Gma.15121.1.S1_atCD414921--5e-14At3g03900adenylylsulfate kinase, putativeO.I.C.G.H.G.
143.8100.053.7soybean_rRNA_718_RC_atsoybean_rRNA_718_RC--2e+1At1g07350transformer serine/arginine-rich ribonucleoprotein, putativeO.I.C.G.H.G.
141.8100.00.1GmaAffx.65112.1.S1_atBQ742910--8e-1At5g66110metal ion bindingO.I.C.G.H.G.
141.2100.08.9Gma.14319.1.A1_atBI968921--3e+0At3g17980C2 domain-containing proteinO.I.C.G.H.G.
140.8100.0762.5GmaAffx.89786.1.A1_s_atCK605840--7e+0At5g09711unknown proteinO.I.C.G.H.G.
140.3100.00.2GmaAffx.30405.1.S1_atAW703688--8e-1At5g64905PROPEP3 (Elicitor peptide 3 precursor)O.I.C.G.H.G.
139.6100.04.2soybean_rRNA_176_RC_atsoybean_rRNA_176_RC--5e+0At5g34581hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
137.8100.02.0GmaAffx.89850.1.A1_atCK606573--6e-58At1g14320SAC52 (SUPPRESSOR OF ACAULIS 52)O.I.C.G.H.G.
137.2100.01.1GmaAffx.89095.1.A1_atCK605629--2e-24At5g5924040S ribosomal protein S8 (RPS8B)O.I.C.G.H.G.
136.6100.00.0PsAffx.C188000025_atPsAffx.C188000025--3e-1At3g17800-O.I.C.G.H.G.



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