Microarray experiments to specifically-expressed genes

GSM ID GSM147938
Assay name Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 3
GSE experiment GSE6414: Expression data from soybean seed compartments with embryos at the globular stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
1706.9100.0196.4GmaAffx.71067.1.S1_atAW307334--4e-1At5g06300carboxy-lyaseO.I.C.G.H.G.
1553.7100.00.1GmaAffx.88723.1.A1_atCK606260--0At1g65970TPX2 (thioredoxin-dependent peroxidase 2)O.I.C.G.H.G.
1415.2100.04.2Gma.2919.1.S1_atBM269717--6e-1At3g55420unknown proteinO.I.C.G.H.G.
1289.5100.0772.6GmaAffx.93286.1.S1_atCF807610--1e-6At3g16150L-asparaginase, putative / L-asparagine amidohydrolase, putativeO.I.C.G.H.G.
1128.9100.0773.8Gma.8489.1.S1_s_atAB030493.1thiamin biosynthetic enzyme /// thiamin biosynthetic enzyme-5e-51At5g54770THI1O.I.C.G.H.G.
1093.4100.0488.6GmaAffx.43575.1.S1_atAW119723--8e+0At4g04810methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinO.I.C.G.H.G.
1068.3100.02.5GmaAffx.88213.1.S1_atAI965815--2e+0At3g45490-O.I.C.G.H.G.
924.8100.01258.6Gma.3033.1.S1_atBM307084--7e+0At5g41450zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
874.9100.01.6GmaAffx.33409.1.A1_atBU547094--3e-1At4g20520RNA binding / RNA-directed DNA polymeraseO.I.C.G.H.G.
768.6100.01.3GmaAffx.87565.1.S1_atBQ081815--8e-1At5g41810unknown proteinO.I.C.G.H.G.
766.5100.0438.0Gma.1096.1.S1_atCD407195--4e-4At5g59310LTP4 (LIPID TRANSFER PROTEIN 4)O.I.C.G.H.G.
749.8100.00.8GmaAffx.61901.1.S1_atAW152953--1e+1At5g09440EXL4 (EXORDIUM LIKE 4)O.I.C.G.H.G.
748.5100.015.9GmaAffx.14927.1.S1_atBQ627487--7e-3At1g79270ECT8 (evolutionarily conserved C-terminal region 8)O.I.C.G.H.G.
707.3100.01561.4Gma.8489.1.S1_atAB030493.1SC-03 mRNA for thiamin biosynthetic enzyme-5e-51At5g54770THI1O.I.C.G.H.G.
687.0100.01604.6soybean_rRNA_666_atsoybean_rRNA_666--5e+0At5g25475DNA bindingO.I.C.G.H.G.
639.3100.051.8Gma.1545.1.A1_atCD410619--8e-14At4g39330CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9)O.I.C.G.H.G.
628.0100.06.7GmaAffx.79221.1.S1_atBU925861--8e-22At1g64110AAA-type ATPase family proteinO.I.C.G.H.G.
619.0100.01941.7soybean_rRNA_1021_atsoybean_rRNA_1021--2e+1At4g01895systemic acquired resistance (SAR) regulator protein NIMIN-1-relatedO.I.C.G.H.G.
575.5100.03.5GmaAffx.6533.1.A1_atBU550258--1e+0At5g03510zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
572.9100.01271.9soybean_rRNA_692_atsoybean_rRNA_692--5e+0At2g41750DTW domain-containing proteinO.I.C.G.H.G.
557.5100.034.0Gma.504.1.S1_atBM525623--6e-1At5g33390glycine-rich proteinO.I.C.G.H.G.
521.8100.024.1Gma.1159.1.S1_atBM527453--6e-1Atcg01000-O.I.C.G.H.G.
515.9100.0814.0GmaAffx.89772.42.S1_x_atCK606038--5e+0At5g56070unknown proteinO.I.C.G.H.G.
515.0100.0188.7Gma.8490.1.S1_atAB030492.1thiamin biosynthetic enzyme-1e-51At5g54770THI1O.I.C.G.H.G.
481.7100.00.5GmaAffx.15815.1.A1_atCD409726--7e-1Atcg00820-O.I.C.G.H.G.
460.5100.01054.6GmaAffx.1301.14.S1_s_atBE822937--5e+0At5g50440MEMB12 (MEMBRIN 12)O.I.C.G.H.G.
449.9100.00.7Gma.13367.1.A1_atCD391752--4e+0At4g20095unknown proteinO.I.C.G.H.G.
431.4100.00.5GmaAffx.67191.1.S1_atBU546286--3e-1At2g24550unknown proteinO.I.C.G.H.G.
421.9100.012.6Gma.13453.1.A1_atCD398472--7e-1At1g07900LBD1 (LOB DOMAIN-CONTAINING PROTEIN 1)O.I.C.G.H.G.
417.4100.052.2GmaAffx.83018.1.S1_s_atBQ080486--6e+0At1g49950DNA-binding protein, putativeO.I.C.G.H.G.
415.4100.00.0PsAffx.C56000027_atPsAffx.C56000027--2e+0At4g38040exostosin family proteinO.I.C.G.H.G.
414.6100.040.2Gma.53.1.S1_atM80664.1maturation polypeptide-2e-4At2g36640ATECP63 (EMBRYONIC CELL PROTEIN 63)O.I.C.G.H.G.
410.6100.0514.1GmaAffx.17961.1.A1_atBE657601--7e-1At5g50423-O.I.C.G.H.G.
407.4100.00.2GmaAffx.83609.1.S1_atBU926787--1e-12At2g44910ATHB4 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4)O.I.C.G.H.G.
400.2100.01.0Gma.2935.1.S1_atBE821167--1e+0At2g27390proline-rich family proteinO.I.C.G.H.G.
397.0100.0115.2GmaAffx.2671.1.S1_atBE822659--8e-1At5g22920zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
396.4100.0102.2Gma.4084.1.S1_atCD412016--6e-7At4g14270-O.I.C.G.H.G.
394.2100.041.1GmaAffx.33541.1.S1_atBU761747--2e-1At3g20280PHD finger family proteinO.I.C.G.H.G.
389.1100.019.9Gma.15985.1.S1_atCD402460--1e-1At4g22490protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
389.0100.02.1Gma.7367.1.S1_atBM094232PLETHORA 2-2e+0At5g25220KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)O.I.C.G.H.G.
387.2100.00.1GmaAffx.74304.1.S1_atBU577360--5e-12At3g19340-O.I.C.G.H.G.
379.9100.02024.0soybean_rRNA_808_atsoybean_rRNA_808--5e+0At5g09711unknown proteinO.I.C.G.H.G.
377.5100.03.9GmaAffx.74663.1.S1_atBU965000--2e-1At5g46290KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I)O.I.C.G.H.G.
375.0100.00.9GmaAffx.1818.1.A1_atBU544786--3e+0At5g11910esterase/lipase/thioesterase family proteinO.I.C.G.H.G.
366.9100.0997.2soybean_rRNA_637_atsoybean_rRNA_637--5e+0At3g01920yrdC family proteinO.I.C.G.H.G.
364.8100.0194.8GmaAffx.295.1.A1_s_atBG653267lipoxygenase-3-3e-1At4g34790auxin-responsive family proteinO.I.C.G.H.G.
363.5100.03.4GmaAffx.63499.1.S1_atBG237862transcription factor LEC1-A-2e-1At1g66680AR401O.I.C.G.H.G.
362.7100.02.8Gma.4331.2.S1_atBE658569--1e+0At5g13410immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.C.G.H.G.
357.9100.00.3Gma.11030.1.S1_atBE190894--6e-2At4g36770UDP-glycosyltransferase/ transferase, transferring glycosyl groupsO.I.C.G.H.G.
354.7100.0352.1GmaAffx.82861.1.S1_atBU761698--1e+0At1g53625unknown proteinO.I.C.G.H.G.
353.1100.01.5GmaAffx.93607.1.S1_s_atCF809332--7e-5At5g64260EXL2 (EXORDIUM LIKE 2)O.I.C.G.H.G.
351.6100.00.7Gma.1028.1.S1_atBE661840--3e-1At3g124603'-5' exonuclease/ nucleic acid bindingO.I.C.G.H.G.
350.4100.00.0PsAffx.C4000116_atPsAffx.C4000116--4e-1At1g20180unknown proteinO.I.C.G.H.G.
347.6100.011.0GmaAffx.88661.1.A1_atCD413777--3e+0At1g05835unknown proteinO.I.C.G.H.G.
342.4100.03.9GmaAffx.24349.1.A1_atBU544028--9e-5At3g15760unknown proteinO.I.C.G.H.G.
341.4100.00.3Gma.10184.1.A1_atAW309727--3e+0At1g56700pyrrolidone-carboxylate peptidase family proteinO.I.C.G.H.G.
340.5100.0100.0soybean_rRNA_808_RC_atsoybean_rRNA_808_RC--5e+0At5g09711unknown proteinO.I.C.G.H.G.
338.0100.00.0PsAffx.C223000020_atPsAffx.C223000020--2e+1Atmg01300-O.I.C.G.H.G.
334.0100.00.0GmaAffx.65390.1.S1_atBU579327--8e-1At3g16050A37O.I.C.G.H.G.
327.6100.015.8GmaAffx.15362.1.S1_atBU926414--1e+0At4g21140unknown proteinO.I.C.G.H.G.
325.9100.05.5GmaAffx.75624.1.S1_atAW311499--7e+0At3g13550FUS9 (FUSCA 9)O.I.C.G.H.G.
319.4100.0164.7soybean_rRNA_637_RC_atsoybean_rRNA_637_RC--5e+0At3g01920yrdC family proteinO.I.C.G.H.G.
313.8100.00.0HgAffx.24158.1.S1_atCB378327--6e+0At5g50136unknown proteinO.I.C.G.H.G.
310.5100.02050.9soybean_rRNA_718_atsoybean_rRNA_718--2e+1At1g07350transformer serine/arginine-rich ribonucleoprotein, putativeO.I.C.G.H.G.
310.3100.00.0GmaAffx.41904.1.S1_atBM525909--1e+0At2g04700ferredoxin thioredoxin reductase catalytic beta chain family proteinO.I.C.G.H.G.
308.6100.00.3GmaAffx.48435.1.A1_atAW350457--2e-1At5g53592-O.I.C.G.H.G.
304.6100.023.9Gma.17785.1.S1_atAW102084--9e-12At1g53170ERF8O.I.C.G.H.G.
304.3100.00.0PsAffx.C3000100_atPsAffx.C3000100--3e-1At1g6000029 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putativeO.I.C.G.H.G.
304.1100.00.1GmaAffx.14967.1.S1_s_atBQ630559--3e-33At4g24430lyaseO.I.C.G.H.G.
300.0100.00.3GmaAffx.79321.1.S1_atCA850892--6e-1At5g48280unknown proteinO.I.C.G.H.G.
297.0100.00.0GmaAffx.55404.1.S1_atBM271530--6e-1At4g01420CBL5 (CALCINEURIN B-LIKE PROTEIN 5)O.I.C.G.H.G.
296.0100.00.0HgAffx.12576.1.S1_atCB375406--6e+0At5g50562unknown proteinO.I.C.G.H.G.
295.7100.01703.2soybean_rRNA_776_atsoybean_rRNA_776--5e+0At5g06410DNAJ heat shock N-terminal domain-containing proteinO.I.C.G.H.G.
288.1100.0672.3GmaAffx.88935.1.A1_s_atCK605567--4e+0At4g17615CBL1 (CALCINEURIN B-LIKE PROTEIN 1)O.I.C.G.H.G.
286.0100.02783.8soybean_rRNA_838_atsoybean_rRNA_838--1e+0At4g27700rhodanese-like domain-containing proteinO.I.C.G.H.G.
285.4100.010.1Gma.493.1.S1_atBM308238--2e+0At2g46840-O.I.C.G.H.G.
284.9100.02.0Gma.16851.1.S1_atCD392811--2e-21At1g752105' nucleotidase family proteinO.I.C.G.H.G.
284.5100.00.0PsAffx.C100000035_atPsAffx.C100000035--2e+0At2g48120PAC (PALE CRESS)O.I.C.G.H.G.
280.8100.073.9soybean_rRNA_718_RC_atsoybean_rRNA_718_RC--2e+1At1g07350transformer serine/arginine-rich ribonucleoprotein, putativeO.I.C.G.H.G.
274.4100.00.0PsAffx.C276000014_atPsAffx.C276000014--2e+0At5g24920AtGDU5 (Arabidopsis thaliana GLUTAMINE DUMPER 5)O.I.C.G.H.G.
273.1100.00.2Gma.9874.1.A1_atAI443554--4e+0At2g40802unknown proteinO.I.C.G.H.G.
266.7100.011.9Gma.2749.1.S1_atBM308188--2e-1At1g72290trypsin and protease inhibitor family protein / Kunitz family proteinO.I.C.G.H.G.
263.2100.00.0Gma.162.1.A1_atAB029270.1GmMYB13 protein-2e-7At4g34990AtMYB32 (myb domain protein 32)O.I.C.G.H.G.
259.6100.02.6Gma.17147.1.S1_atBI423768--2e-16At5g06130chaperone protein dnaJ-relatedO.I.C.G.H.G.
254.6100.02.3Gma.6796.1.S1_atBU545053--1e-8At4g36880CP1 (CYSTEINE PROTEINASE1)O.I.C.G.H.G.
254.6100.00.2GmaAffx.87437.1.S1_atBM732318--1e-1At5g40260nodulin MtN3 family proteinO.I.C.G.H.G.
253.7100.00.0HgAffx.17042.1.S1_atCB279314--1e+1At5g65060MAF3 (MADS AFFECTING FLOWERING 3)O.I.C.G.H.G.
252.8100.079.6Gma.6264.1.S1_atBQ612558--6e-3At1g78020senescence-associated protein-relatedO.I.C.G.H.G.
251.4100.04.9GmaAffx.8109.1.S1_atAW423989--1e+0At3g02580STE1 (STEROL 1)O.I.C.G.H.G.
247.7100.00.2Gma.16904.2.S1_atBF423646--9e-2At2g14500F-box family proteinO.I.C.G.H.G.
246.0100.01346.3soybean_rRNA_349_atsoybean_rRNA_349--5e+0At4g11140CRF1 (CYTOKININ RESPONSE FACTOR 1)O.I.C.G.H.G.
245.1100.0139.2Gma.525.1.S1_atCF921971--4e-1At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)O.I.C.G.H.G.
242.4100.01.7GmaAffx.55264.1.S1_atBE824031--4e-24At2g40220ABI4 (ABA INSENSITIVE 4)O.I.C.G.H.G.
235.2100.00.0HgAffx.3674.1.A1_atCK349016--3e+0At1g12880atnudt12 (Arabidopsis thaliana Nudix hydrolase homolog 12)O.I.C.G.H.G.
234.1100.078.6soybean_rRNA_1692_RC_atsoybean_rRNA_1692_RC--2e+1Atmg00030-O.I.C.G.H.G.
234.1100.00.0PsAffx.C1000017_atPsAffx.C1000017--2e-1At1g02920GSTF7O.I.C.G.H.G.
231.9100.00.2Gma.10982.1.S1_atBM307392--5e-1At5g02640unknown proteinO.I.C.G.H.G.
229.3100.022.0GmaAffx.79139.1.S1_atBM309694--3e-16At1g73590PIN1 (PIN-FORMED 1)O.I.C.G.H.G.
228.8100.00.2GmaAffx.30405.1.S1_atAW703688--8e-1At5g64905PROPEP3 (Elicitor peptide 3 precursor)O.I.C.G.H.G.
226.5100.02013.5soybean_rRNA_1665_atsoybean_rRNA_1665--2e-2At3g50390transducin family protein / WD-40 repeat family proteinO.I.C.G.H.G.



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