Microarray experiments to specifically-expressed genes

GSM ID GSM147936
Assay name Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 1
GSE experiment GSE6414: Expression data from soybean seed compartments with embryos at the globular stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
2237.5100.03.4GmaAffx.66268.1.A1_atAW119745--3e+0At4g28820zinc finger (HIT type) family proteinO.I.C.G.H.G.
1903.9100.029.1GmaAffx.3717.1.A1_atBE822345--4e+0At3g04730IAA16O.I.C.G.H.G.
879.2100.022.3GmaAffx.19934.1.S1_atBU764072--3e+0At4g16030structural constituent of ribosomeO.I.C.G.H.G.
352.6100.00.4GmaAffx.55781.1.A1_atBQ080602--3e+0At4g26810SWIB complex BAF60b domain-containing proteinO.I.C.G.H.G.
333.8100.00.9GmaAffx.768.1.A1_atBE821548--2e+0At1g62210unknown proteinO.I.C.G.H.G.
315.8100.047.4GmaAffx.11793.1.S1_atAW432754--1e+1Atmg01370-O.I.C.G.H.G.
296.2100.03.1GmaAffx.22784.1.S1_atAW101036--2e+0At5g3974060S ribosomal protein L5 (RPL5B)O.I.C.G.H.G.
292.7100.061.5GmaAffx.26533.1.A1_s_atBE659836--7e-1At2g24260basic helix-loop-helix (bHLH) family proteinO.I.C.G.H.G.
287.0100.089.0Gma.16134.1.A1_s_atCD416389--4e+0At5g24770VSP2 (VEGETATIVE STORAGE PROTEIN 2)O.I.C.G.H.G.
284.4100.07.4GmaAffx.12714.1.A1_atBE658291--2e+0At2g35090unknown proteinO.I.C.G.H.G.
276.3100.015.6Gma.9308.1.S1_atBG156885--6e-1At5g35737unknown proteinO.I.C.G.H.G.
275.2100.00.1GmaAffx.10914.1.S1_atCA802681--3e+0At1g64405unknown proteinO.I.C.G.H.G.
254.5100.01.3Gma.10787.1.S1_a_atBG650304--2e+0At3g23040unknown proteinO.I.C.G.H.G.
249.3100.0147.3GmaAffx.42925.1.S1_s_atCA802660--3e+0At5g57450XRCC3O.I.C.G.H.G.
248.5100.08.4GmaAffx.67608.1.S1_atBF066275--3e+0At4g29658PRA1.C (PRENYLATED RAB ACCEPTOR 1.C)O.I.C.G.H.G.
243.6100.05.5Gma.17336.1.S1_atAW569785--2e+0At2g05335SCRL15 (SCR-Like 15)O.I.C.G.H.G.
237.1100.0105.7Gma.4659.1.S1_atAW100643--2e-7At1g31690amine oxidase/ copper ion binding / quinone bindingO.I.C.G.H.G.
232.2100.012.1GmaAffx.68724.1.A1_atBI970438--3e+0At2g40650pre-mRNA splicing factor PRP38 family proteinO.I.C.G.H.G.
227.9100.00.0Gma.13914.1.A1_atCD409946--2e-1At5g40330MYB23 (MYB DOMAIN PROTEIN 23)O.I.C.G.H.G.
227.8100.019.3GmaAffx.55781.1.A1_s_atBQ080602--3e+0At4g26810SWIB complex BAF60b domain-containing proteinO.I.C.G.H.G.
220.8100.09.6Gma.9176.1.S1_atCA802590--2e-2At3g50740UGT72E1 (UDP-glucosyl transferase 72E1)O.I.C.G.H.G.
210.5100.0590.0Gma.1532.1.S1_atCD409023--3e-2At2g17350unknown proteinO.I.C.G.H.G.
210.3100.02.7GmaAffx.83319.1.S1_atBU081287--3e+0At3g57390AGL18O.I.C.G.H.G.
206.8100.024.4Gma.16246.1.A1_atCD406801--4e+0At5g26622beta-galactosidaseO.I.C.G.H.G.
202.9100.05.1GmaAffx.92673.1.S1_atCF808398--2e-1At2g38640unknown proteinO.I.C.G.H.G.
202.6100.00.1GmaAffx.11880.1.S1_atAW395418--7e-2At2g43740-O.I.C.G.H.G.
197.7100.07.8GmaAffx.65743.1.S1_atCA935414--6e+0At5g27810sequence-specific DNA binding / transcription factorO.I.C.G.H.G.
197.0100.04.6GmaAffx.92673.1.S1_x_atCF808398--2e-1At2g38640unknown proteinO.I.C.G.H.G.
196.1100.0315.4GmaAffx.89635.1.A1_s_atCK606089--2e-2At2g17350unknown proteinO.I.C.G.H.G.
187.8100.01.5GmaAffx.50290.1.S1_atBI423787--3e+0At2g05635ATP binding / ATP-dependent DNA helicase/ DNA bindingO.I.C.G.H.G.
186.6100.016.1Gma.11484.1.A1_atCD416697--8e-1At3g20940CYP705A30O.I.C.G.H.G.
178.6100.00.1GmaAffx.86068.3.S1_x_atBI700044--1e+0At5g11416unknown proteinO.I.C.G.H.G.
178.1100.01.3Gma.12819.1.A1_atCD391420--3e+0At4g23271unknown proteinO.I.C.G.H.G.
169.3100.01.5GmaAffx.85033.1.S1_atAW733614--5e-4At5g38700unknown proteinO.I.C.G.H.G.
163.1100.08.9GmaAffx.27554.1.S1_atAW459996--9e-1At4g35080high-affinity nickel-transport family proteinO.I.C.G.H.G.
158.5100.00.9GmaAffx.84165.1.A1_atCD418154--7e-1At2g19290unknown proteinO.I.C.G.H.G.
157.5100.0308.9Gma.772.1.S1_atBE819852--4e+0At4g29780unknown proteinO.I.C.G.H.G.
153.5100.00.4GmaAffx.74933.1.S1_atCA935084--6e-2At1g01300aspartyl protease family proteinO.I.C.G.H.G.
147.0100.09.9GmaAffx.7751.1.S1_atBE059367--8e-1At1g01380ETC1 (ENHANCER OF TRY AND CPC 1)O.I.C.G.H.G.
146.9100.00.1GmaAffx.66066.1.S1_atAI795106--3e-1At2g42040-O.I.C.G.H.G.
146.5100.0398.5Gma.11166.1.S1_x_atAW705829lipoxygenase-9-8e-1At3g22400LOX5O.I.C.G.H.G.
146.1100.024.2GmaAffx.50536.1.A1_s_atBI892928--6e+0At5g27720emb1644 (embryo defective 1644)O.I.C.G.H.G.
138.8100.00.0GmaAffx.86068.3.S1_atBI700044--1e+0At5g11416unknown proteinO.I.C.G.H.G.
135.4100.0113.6GmaAffx.57176.1.S1_atAW101124--2e+1At4g19035LCR7 (Low-molecular-weight cysteine-rich 7)O.I.C.G.H.G.
134.5100.00.1Gma.9552.1.A1_atAB086391.1hypothetical protein LOC548097-4e-1At1g49930-O.I.C.G.H.G.
133.2100.00.1GmaAffx.75113.1.A1_atCD411446--7e-1At3g6024560S ribosomal protein L37a (RPL37aC)O.I.C.G.H.G.
129.9100.05.8Gma.702.1.S1_atCD412938--2e-2At3g45140LOX2 (LIPOXYGENASE 2)O.I.C.G.H.G.
127.4100.071.5Gma.3030.1.S1_s_atCD397432--1e-23At5g28640AN3 (ANGUSTIFOLIA 3)O.I.C.G.H.G.
126.6100.00.1GmaAffx.91436.1.S1_atCF807161--8e-1At5g02540short-chain dehydrogenase/reductase (SDR) family proteinO.I.C.G.H.G.
126.5100.03.2Gma.54.1.S1_atL01453.1protein kinase-4e-33At3g50500SNRK2.2 (SNF1-RELATED PROTEIN KINASE 2.2)O.I.C.G.H.G.
125.3100.02.9GmaAffx.86863.1.A1_atBU545164--2e-5At1g24170LGT9O.I.C.G.H.G.
125.0100.00.1GmaAffx.77097.1.S1_atBG237643--2e+0At5g15040paired amphipathic helix repeat-containing proteinO.I.C.G.H.G.
124.0100.01.9GmaAffx.24390.1.A1_atBU547189--2e-1At1g29480unknown proteinO.I.C.G.H.G.
118.3100.06.8Gma.7726.1.A1_atBM886413--6e-2At4g27280calcium-binding EF hand family proteinO.I.C.G.H.G.
117.1100.00.3Gma.11383.1.S1_atBE820263--2e-4At4g30270MERI5B (meristem-5)O.I.C.G.H.G.
115.9100.00.3GmaAffx.66066.1.A1_atBE805444--3e-1At2g42040-O.I.C.G.H.G.
114.8100.088.9GmaAffx.66649.1.S1_atCA819378--3e+0At3g23610dual specificity protein phosphatase (DsPTP1)O.I.C.G.H.G.
111.5100.026.9GmaAffx.33050.1.S1_x_atBE022504--3e-2At2g41410calmodulin, putativeO.I.C.G.H.G.
110.0100.023.9Gma.12334.1.A1_s_atBI702139--5e-5At3g13227serine-rich protein-relatedO.I.C.G.H.G.
109.4100.03.0GmaAffx.7290.1.A1_atBE658988--5e+0At5g06265hyaluronan mediated motility receptor-relatedO.I.C.G.H.G.
108.0100.0166.4Gma.1379.2.A1_atCD409927--2e+0At1g29179-O.I.C.G.H.G.
107.7100.047.3GmaAffx.62443.1.S1_atAW099879--7e-1At1g12470Pep3/Vps18/deep orange family proteinO.I.C.G.H.G.
106.9100.012.9GmaAffx.65651.1.S1_atCA819824--5e-10At1g70090LGT8 (GLUCOSYL TRANSFERASE FAMILY 8)O.I.C.G.H.G.
105.7100.068.3Gma.16487.1.S1_atBU091077--6e-7At5g08000E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)O.I.C.G.H.G.
103.7100.05.9Gma.9448.1.S1_atCA802955--5e-1At4g37610BT5 (BTB AND TAZ DOMAIN PROTEIN 5)O.I.C.G.H.G.
103.5100.04.0Gma.13931.1.A1_atCD410679--1e+0At3g03100NADH:ubiquinone oxidoreductase family proteinO.I.C.G.H.G.
101.6100.068.8Gma.13187.1.S1_atBG839239--5e-4At3g02910-O.I.C.G.H.G.
100.9100.01.0GmaAffx.4029.1.S1_atBG044865--2e-24At2g34850MEE25 (maternal effect embryo arrest 25)O.I.C.G.H.G.
99.9100.00.2Gma.14675.1.S1_atAW423710--2e+0At5g53730harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.C.G.H.G.
99.7100.010.2Gma.13453.1.A1_atCD398472--7e-1At1g07900LBD1 (LOB DOMAIN-CONTAINING PROTEIN 1)O.I.C.G.H.G.
99.4100.0147.4Gma.11166.1.S1_s_atAW705829lipoxygenase-9-8e-1At3g22400LOX5O.I.C.G.H.G.
97.8100.075.2GmaAffx.60971.1.S1_atBG725747--1e-4At4g17230SCL13 (Scarecrow-like 13)O.I.C.G.H.G.
97.7100.0453.3Gma.3033.1.S1_atBM307084--7e+0At5g41450zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
97.5100.0285.3GmaAffx.54479.2.A1_s_atCD405056--1e-2At4g09610GASA2 (GAST1 PROTEIN HOMOLOG 2)O.I.C.G.H.G.
96.9100.0416.9Gma.8496.1.S1_atAF467554.1seed coat BURP domain protein 1-7e-1At1g50290unknown proteinO.I.C.G.H.G.
96.0100.023.3Gma.8222.1.S1_atBU549414--8e-6At1g74450unknown proteinO.I.C.G.H.G.
94.5100.00.3GmaAffx.1438.1.A1_atBU549700--1e+0At1g58170disease resistance-responsive protein-related / dirigent protein-relatedO.I.C.G.H.G.
94.4100.00.0GmaAffx.11888.1.S1_atAW395698--1e+1At4g28485unknown proteinO.I.C.G.H.G.
93.5100.015.4GmaAffx.3723.1.A1_atBE822756--3e+0At5g28491unknown proteinO.I.C.G.H.G.
93.2100.010.9GmaAffx.2186.1.A1_atCD410010--1e+1At5g16880VHS domain-containing protein / GAT domain-containing proteinO.I.C.G.H.G.
92.9100.012.1Gma.12102.1.S1_atBG511766--2e+0At4g09731unknown proteinO.I.C.G.H.G.
92.8100.0170.2Gma.7454.1.S1_a_atCD405901--3e-9At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)O.I.C.G.H.G.
92.8100.029.9Gma.4018.1.S1_atAW423444--1e+0At3g49470NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)O.I.C.G.H.G.
92.0100.01.8Gma.986.1.S1_atAI959966--2e-6At2g37430zinc finger (C2H2 type) family protein (ZAT11)O.I.C.G.H.G.
91.0100.025.9Gma.1007.2.S1_atCD395937--3e+0At5g20900JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12)O.I.C.G.H.G.
90.4100.00.0Gma.803.1.A1_atBE820896--5e-1At2g45990unknown proteinO.I.C.G.H.G.
90.0100.012.8Gma.6814.1.S1_atCD397900--2e-2At1g15710prephenate dehydrogenase family proteinO.I.C.G.H.G.
89.3100.068.7Gma.8468.1.S1_atAF244890.1receptor-like protein kinase 3-2e-49At5g65700BAM1 (BARELY ANY MERISTEM 1)O.I.C.G.H.G.
88.8100.00.0HgAffx.19273.1.S1_atCA939907--3e+0At3g33187-O.I.C.G.H.G.
88.6100.047.7GmaAffx.38825.1.A1_atAI960423--8e-1At5g27541O.I.C.G.H.G.
88.5100.064.4GmaAffx.33050.1.S1_atBE022504--3e-2At2g41410calmodulin, putativeO.I.C.G.H.G.
88.2100.089.9Gma.2240.1.S1_atAW311147endo-xyloglucan transferase-2e-47At5g13870EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4)O.I.C.G.H.G.
88.2100.02.4Gma.9805.1.S1_atCA937224--4e+0At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)O.I.C.G.H.G.
88.1100.07.6GmaAffx.48725.1.S1_atAW733493--8e-1At5g22608unknown proteinO.I.C.G.H.G.
87.8100.0127.3GmaAffx.1301.121.A1_s_atCD394418--1e-2At4g19905LCR38 (Low-molecular-weight cysteine-rich 38)O.I.C.G.H.G.
87.6100.015.3Gma.13449.1.A1_atCD402146--3e+0At5g59150ATRABA2D (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D)O.I.C.G.H.G.
87.3100.04.3GmaAffx.1061.1.S1_atBU544040--2e-5At5g49120senescence-associated protein-relatedO.I.C.G.H.G.
86.8100.00.2GmaAffx.93135.1.S1_atCF808860--3e+0At2g19045RALFL13 (RALF-LIKE 13)O.I.C.G.H.G.
86.8100.00.0PsAffx.C128000031_atPsAffx.C128000031--9e+0At5g52970thylakoid lumen 15.0 kDa proteinO.I.C.G.H.G.
86.7100.0652.6Gma.8489.1.S1_atAB030493.1SC-03 mRNA for thiamin biosynthetic enzyme-5e-51At5g54770THI1O.I.C.G.H.G.



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