Microarray experiments to specifically-expressed genes

GSM ID GSM147935
Assay name Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3
GSE experiment GSE6414: Expression data from soybean seed compartments with embryos at the globular stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
1984.8100.028.8GmaAffx.35664.1.S1_atBE823010--1e-2At4g02871unknown proteinO.I.C.G.H.G.
1939.3100.0214.9Gma.176.1.S1_atAF004810.1seed maturation protein-1e+0At4g39675unknown proteinO.I.C.G.H.G.
1713.5100.0172.5Gma.8042.1.S1_atBM270037seed maturation protein PM38-5e-7At5g22470NAD+ ADP-ribosyltransferaseO.I.C.G.H.G.
1425.1100.00.6GmaAffx.59352.1.S1_atBU549305--3e-8At2g33380RD20 (RESPONSIVE TO DESSICATION 20)O.I.C.G.H.G.
1360.2100.0488.6Gma.8492.1.S1_atAF169023.1seed maturation protein PM38-1e-16At5g22470NAD+ ADP-ribosyltransferaseO.I.C.G.H.G.
1209.2100.0156.9Gma.176.1.S1_s_atAF004810.1seed maturation protein-1e+0At4g39675unknown proteinO.I.C.G.H.G.
1188.5100.02.5Gma.11972.1.S1_atBF597102--2e+0At5g14400CYP724A1O.I.C.G.H.G.
1145.6100.02.7Gma.3027.1.A1_atBM270824--3e+0At3g04200germin-like protein, putativeO.I.C.G.H.G.
1022.7100.045.9Gma.167.1.S1_atAF117725.1seed maturation protein-1e+0At1g10870AGD4 (ARF-GAP domain 4)O.I.C.G.H.G.
807.9100.00.1GmaAffx.6147.1.S1_atBU926251--3e-3At4g26740ATS1 (ARABIDOPSIS THALIANA SEED GENE 1)O.I.C.G.H.G.
785.5100.07.4Gma.8.1.S1_atAF004809.1Ca+2-binding EF hand protein-5e-7At4g26740ATS1 (ARABIDOPSIS THALIANA SEED GENE 1)O.I.C.G.H.G.
774.9100.07.7Gma.12356.1.A1_atCD397798--8e-1At4g05370-O.I.C.G.H.G.
690.2100.00.1Gma.17549.1.S1_atBG654067--5e-1At1g47960C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1)O.I.C.G.H.G.
659.3100.036.7Gma.1603.1.S1_atBI943666--8e-3At3g63052unknown proteinO.I.C.G.H.G.
613.2100.01.3GmaAffx.67346.1.A1_atBE657276--3e+0At4g26370antitermination NusB domain-containing proteinO.I.C.G.H.G.
576.6100.02.9GmaAffx.27579.1.S1_atBU547542--5e-1At3g19200unknown proteinO.I.C.G.H.G.
545.5100.00.4Gma.1728.1.A1_atBG653561--9e-1At1g02965unknown proteinO.I.C.G.H.G.
482.6100.05.1GmaAffx.10204.1.S1_atBQ298213--9e-6At5g63350unknown proteinO.I.C.G.H.G.
468.5100.023.0Gma.16796.1.S1_atAW310250--1e-8At3g01472CPuORF33 (Conserved peptide upstream open reading frame 33)O.I.C.G.H.G.
445.3100.014.3Gma.8539.1.S1_atAF169025.1seed maturation protein PM41-1e-3At2g21820unknown proteinO.I.C.G.H.G.
414.8100.05413.0soybean_rRNA_718_atsoybean_rRNA_718--2e+1At1g07350transformer serine/arginine-rich ribonucleoprotein, putativeO.I.C.G.H.G.
406.9100.00.3GmaAffx.16002.1.A1_atBI968001--6e-1At4g03620myosin heavy chain-relatedO.I.C.G.H.G.
400.2100.04.5GmaAffx.59223.1.S1_atBG654040--1e+1Atcg01070-O.I.C.G.H.G.
394.6100.014.8Gma.12921.1.A1_atCD395705--7e-1At5g22870harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedO.I.C.G.H.G.
387.5100.04.1Gma.7367.1.S1_atBM094232PLETHORA 2-2e+0At5g25220KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)O.I.C.G.H.G.
386.7100.00.8GmaAffx.93290.1.S1_atCF809015--1e+0At5g47080CKB1O.I.C.G.H.G.
385.7100.00.5GmaAffx.36061.1.S1_atBM142770--9e-1At3g26085CAAX amino terminal protease family proteinO.I.C.G.H.G.
359.1100.00.9GmaAffx.51910.1.S1_atBU965521--9e-1At2g47890zinc finger (B-box type) family proteinO.I.C.G.H.G.
348.7100.01.2Gma.1728.1.S1_atBM891591--9e-1At1g02965unknown proteinO.I.C.G.H.G.
348.3100.0160.7GmaAffx.34765.1.S1_atBE823831--2e-15At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)O.I.C.G.H.G.
347.2100.05.3GmaAffx.6038.1.A1_atBU551290--5e+0At4g30230unknown proteinO.I.C.G.H.G.
342.9100.06.8GmaAffx.40962.1.S1_atBQ628146--7e-12At5g26200mitochondrial substrate carrier family proteinO.I.C.G.H.G.
339.8100.0428.9Gma.9.1.S1_atAF004807.1dehydrin-1e-7At5g66400RAB18 (RESPONSIVE TO ABA 18)O.I.C.G.H.G.
329.9100.00.0GmaAffx.80347.1.S1_atAW568683--3e+0At5g60130transcriptional factor B3 family proteinO.I.C.G.H.G.
325.5100.03.0Gma.10903.1.A1_atBI971057--1e+0At1g62060unknown proteinO.I.C.G.H.G.
323.4100.00.9GmaAffx.10484.1.A1_atBU544601--4e+0At5g60440AGL62 (Agamous-like 62)O.I.C.G.H.G.
322.7100.00.2Gma.7583.1.S1_atBU548804--7e+0Atcg00770-O.I.C.G.H.G.
319.2100.07.7Gma.15582.1.S1_atCD403765--1e+0At1g53380unknown proteinO.I.C.G.H.G.
313.0100.071.1GmaAffx.51131.1.S1_s_atBM528825maturation protein PM3-7e+0At5g32450RNA recognition motif (RRM)-containing proteinO.I.C.G.H.G.
306.3100.010.1GmaAffx.77266.1.S1_atBG551381--3e-2At1g64500glutaredoxin family proteinO.I.C.G.H.G.
306.1100.00.9Gma.8491.1.S1_atAW509471seed maturation protein PM39-8e-1At4g22430-O.I.C.G.H.G.
304.5100.052.2Gma.2533.1.S1_atAI416735Cultivar Lincoln GAI1-3e-13At1g14920GAI (GIBBERELLIC ACID INSENSITIVE)O.I.C.G.H.G.
301.3100.00.5Gma.13627.1.A1_atCD401962--7e-1At1g35820unknown proteinO.I.C.G.H.G.
295.9100.00.0GmaAffx.79482.1.A1_atCD395674--2e+0At3g13437unknown proteinO.I.C.G.H.G.
290.5100.00.0Gma.42.1.S1_x_atK01968.1Bowman-Birk protease inhibitor-2e+0At5g49400zinc knuckle (CCHC-type) family proteinO.I.C.G.H.G.
289.0100.00.0GmaAffx.92243.1.S1_atCF807968--1e+0At1g14205ribosomal protein L18 family proteinO.I.C.G.H.G.
283.5100.07.5GmaAffx.73495.1.S1_atBM092420--4e-1At5g37240unknown proteinO.I.C.G.H.G.
281.6100.00.0GmaAffx.84083.1.A1_atCD402145--1e+1At5g51545LPA2 (low psii accumulation2)O.I.C.G.H.G.
277.3100.029.3Gma.8528.1.S1_atAF116755.1seed maturation protein PM26-2e+0At3g49115unknown proteinO.I.C.G.H.G.
276.0100.02.9Gma.4887.1.A1_atCD405112--1e-11At1g52930brix domain-containing proteinO.I.C.G.H.G.
275.8100.00.2GmaAffx.47376.1.S1_atBU965378--3e+0At5g67260CYCD3O.I.C.G.H.G.
274.6100.01.0GmaAffx.18412.2.S1_atBI974953--4e+0At4g15540-O.I.C.G.H.G.
264.8100.012.6Gma.3096.1.S1_atAF166485.1maturation protein pPM32-3e-2At4g13230late embryogenesis abundant domain-containing protein / LEA domain-containing proteinO.I.C.G.H.G.
264.1100.03.6GmaAffx.56338.2.S1_atBF424478--3e-1At3g29090pectinesterase family proteinO.I.C.G.H.G.
256.6100.0999.8GmaAffx.8932.6.S1_s_atAW099275--7e+0At5g53030unknown proteinO.I.C.G.H.G.
256.1100.00.1GmaAffx.65341.1.A1_atBU551108--1e+0At5g48945LCR46 (Low-molecular-weight cysteine-rich 46)O.I.C.G.H.G.
251.5100.00.6GmaAffx.87120.1.S1_atBM094175--5e+0At5g13250unknown proteinO.I.C.G.H.G.
248.9100.00.1GmaAffx.20137.1.S1_atCA802387--2e+0At1g43665protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
248.5100.00.1Gma.17161.1.S1_atBE023177--1e-1At5g51840unknown proteinO.I.C.G.H.G.
247.7100.00.4GmaAffx.86224.1.S1_atBG237122--8e-1Atmg01060-O.I.C.G.H.G.
245.5100.03.5GmaAffx.27463.1.S1_atBQ298137--4e+0At5g15850COL1 (constans-like 1)O.I.C.G.H.G.
244.6100.00.9GmaAffx.31234.1.A1_atBE823971--8e-10At5g45780leucine-rich repeat transmembrane protein kinase, putativeO.I.C.G.H.G.
243.2100.06.0GmaAffx.83450.1.A1_atAW761473--1e+0At3g24110calcium-binding EF hand family proteinO.I.C.G.H.G.
238.6100.01.1GmaAffx.63115.1.A1_atBE823736--3e+0At3g09470-O.I.C.G.H.G.
235.7100.033.1GmaAffx.73258.1.S1_atBE611723--4e+0At4g29820CFIM-25O.I.C.G.H.G.
234.1100.00.0PsAffx.C85000018_atPsAffx.C85000018--1e+1At3g51100unknown proteinO.I.C.G.H.G.
232.5100.00.3Gma.8044.1.A1_atBU547558--1e+0At3g26790FUS3 (FUSCA 3)O.I.C.G.H.G.
230.9100.00.3GmaAffx.81855.1.S1_atBG650634--6e+0At4g25720QC (GLUTAMINYL CYCLASE)O.I.C.G.H.G.
229.6100.0161.8Gma.17489.1.S1_atCD401597--1e-1At4g16140proline-rich family proteinO.I.C.G.H.G.
224.2100.00.4Gma.495.1.S1_atBM519699--6e-1At2g33810SPL3 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 3)O.I.C.G.H.G.
224.0100.00.5GmaAffx.41553.1.S1_atBM886596--2e+1At5g42670agenet domain-containing proteinO.I.C.G.H.G.
216.7100.00.1GmaAffx.52856.1.S1_atAW308958--4e+0At4g00780meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.C.G.H.G.
216.1100.00.6GmaAffx.60916.1.S1_atBU761525--2e+0At2g23321unknown proteinO.I.C.G.H.G.
213.9100.00.0GmaAffx.34952.1.S1_atBU547069--9e-2At3g03660WOX11 (WUSCHEL related homeobox 11)O.I.C.G.H.G.
208.1100.02.5GmaAffx.13551.1.A1_atBU549065--6e+0At3g05010transmembrane protein, putativeO.I.C.G.H.G.
204.0100.00.4GmaAffx.15143.1.A1_atBU545904--2e+1At5g50175unknown proteinO.I.C.G.H.G.
201.0100.00.4GmaAffx.77804.1.A1_atBI968697--2e-1At2g16850PIP2O.I.C.G.H.G.
200.1100.00.4GmaAffx.1438.1.A1_atBU549700--1e+0At1g58170disease resistance-responsive protein-related / dirigent protein-relatedO.I.C.G.H.G.
196.8100.00.0HgAffx.24234.1.S1_atCD748695--5e+0At3g53010-O.I.C.G.H.G.
193.5100.00.1GmaAffx.5929.1.A1_atBU545403--9e-1At3g56080dehydration-responsive protein-relatedO.I.C.G.H.G.
192.9100.00.2GmaAffx.650.1.S1_atBU081727--8e+0At3g22961-O.I.C.G.H.G.
191.9100.00.4GmaAffx.13322.1.S1_atBG157160--3e+0At5g05000TOC34 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34)O.I.C.G.H.G.
191.6100.02.2Gma.9804.1.S1_atCA937103--3e+0At1g19040transcription factorO.I.C.G.H.G.
187.7100.0305.3Gma.17364.1.S1_atCA80307824 kDa oleosin isoform-6e-1At5g64850unknown proteinO.I.C.G.H.G.
187.1100.00.2GmaAffx.62324.1.A1_atBU544103--2e-1At1g77145unknown proteinO.I.C.G.H.G.
186.0100.0111.7Gma.7418.1.S1_atBU547276--2e-6At1g74110CYP78A10O.I.C.G.H.G.
184.6100.00.0GmaAffx.3707.1.A1_atBE821338--5e-1At5g65300unknown proteinO.I.C.G.H.G.
184.5100.00.2GmaAffx.89050.1.A1_atCK605986--6e-1At1g29480unknown proteinO.I.C.G.H.G.
182.3100.054.1GmaAffx.81233.1.A1_atBE823605--3e+0At5g58650PSY1 (plant peptide containing sulfated tyrosine 1)O.I.C.G.H.G.
182.2100.067.9GmaAffx.53937.1.A1_atBE823122--7e-1At4g26170unknown proteinO.I.C.G.H.G.
182.1100.00.1Gma.7623.1.A1_atBU549129--9e-1At5g11260HY5 (ELONGATED HYPOCOTYL 5)O.I.C.G.H.G.
181.1100.04.6GmaAffx.35309.1.S1_s_atBG882264--5e-2At4g34730ribosome-binding factor A family proteinO.I.C.G.H.G.
181.1100.01.6Gma.9160.1.A1_atBE823413--3e+0At5g22570WRKY38O.I.C.G.H.G.
180.9100.00.3Gma.10239.2.A1_atBE021764--2e-1Atmg00480-O.I.C.G.H.G.
179.8100.045.7Gma.2952.1.S1_atBM270250--5e-1At1g80500-O.I.C.G.H.G.
179.7100.00.1GmaAffx.78595.1.S1_atBQ610542--2e+0At1g75230HhH-GPD base excision DNA repair family proteinO.I.C.G.H.G.
173.3100.00.0Gma.13455.1.S1_atCD398517--3e-1At4g25370Clp amino terminal domain-containing proteinO.I.C.G.H.G.
172.7100.054.7soybean_rRNA_1057_RC_atsoybean_rRNA_1057_RC--1e+0At1g66700PXMT1O.I.C.G.H.G.
172.2100.00.0Gma.7348.1.A1_atBU547106--1e+0At4g09012-O.I.C.G.H.G.
171.4100.00.0Gma.8912.1.S1_atBU761646--2e+0At4g25050ACP4 (acyl carrier protein 4)O.I.C.G.H.G.



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