CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM143309

Assay name Tsu_genomic_hyb_2

GSE experiment GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
964.5 100.0 113.3 At3g13240 820523 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown O.I. C.G. H.G.
748.0 100.0 45.7 At3g16020 820847 phospholipase C F:phospholipase C activity;P:intracellular signaling cascade, lipid metabolic process;C:cellular_component unknown;P O.I. C.G. H.G.
653.0 100.0 38.0 At5g37240 833698 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
637.8 100.0 55.9 At5g50910 835163 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
610.9 100.0 52.7 At5g27810 832843 sequence-specific DNA binding / transcription factor F:transcription factor activity, sequence-specific DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;P O.I. C.G. H.G.
603.6 100.0 74.3 At5g53960 835479 ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing) F:DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding;P:DNA topological change, DNA metabolic process;C:plasma membrane;POM O.I. C.G. H.G.
562.6 100.0 89.0 At2g15070 3767890 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
558.3 100.0 89.3 At3g26240 822226 DC1 domain-containing protein F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMBOF O.I. C.G. H.G.
550.4 100.0 55.6 At5g46000 834640 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
547.8 100.0 32.7 At2g41450 818743 N-acetyltransferase F:N-acetyltransferase activity;P:metabolic process;C:intracellular;MOPFB O.I. C.G. H.G.
545.3 100.0 51.9 At1g72080 843539 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOFPBVA O.I. C.G. H.G.
543.1 100.0 50.2 At5g02330 831755 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO O.I. C.G. H.G.
538.8 100.0 59.5 At2g22750 816805 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
534.5 100.0 35.5 At4g04410 3769846 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
530.6 100.0 42.3 At5g17080 831571 cathepsin-related F:cysteine-type peptidase activity;P:unknown;C:cellular_component unknown;MOPV O.I. C.G. H.G.
528.2 100.0 22.1 At3g28190 822445 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system O.I. C.G. H.G.
527.3 100.0 30.1 At5g32490 3771040 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
524.2 100.0 29.7 At3g55670 824733 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
523.4 100.0 46.6 At2g24140 816948 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MOPFBAV O.I. C.G. H.G.
519.2 100.0 28.3 At2g11130 3768370 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
515.6 100.0 51.0 At1g27285 3766803 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
513.9 100.0 39.0 At2g11270 815597 citrate synthase-related F:transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer;P:cellular carbohydrate metabolic process;C:cellular_component unknown;MP O.I. C.G. H.G.
504.2 100.0 60.4 At3g54310 824598 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
495.2 100.0 70.2 At3g25185 - - O.I. C.G. H.G.
494.3 100.0 55.6 At2g06950 3768536 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
490.8 100.0 100.2 At1g65210 842828 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB O.I. C.G. H.G.
490.3 100.0 30.0 At1g13310 837891 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
488.3 100.0 53.8 At3g28350 822464 - Pseudogene of AT3G28350; unknown protein O.I. C.G. H.G.
487.9 100.0 27.1 At3g28240 822450 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
485.8 100.0 57.0 At1g58300 842199 ho4 (HEME OXYGENASE 4) Encodes a member (HO4) of the heme oxygenase family. O.I. C.G. H.G.
484.8 100.0 31.4 At3g50170 824179 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
479.3 100.0 35.2 At3g60560 825227 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
476.4 100.0 46.6 At4g20220 827769 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
456.3 100.0 39.9 At1g54470 841889 RPP27 (resistance to Peronospora parasitica 27) Encodes a Cf-like gene in Arabidopsis that confers downy mildew resistance to several isolates of Peronospora parasitica. O.I. C.G. H.G.
456.0 100.0 43.9 At1g67450 843065 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
455.2 100.0 33.1 At2g02660 814795 - F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PM O.I. C.G. H.G.
449.8 100.0 64.1 At2g23040 816834 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
448.5 100.0 30.2 At4g19850 827729 ATPP2-A2 encodes a protein similar to phloem protein 2 in cucumber. a member of a large gene family. O.I. C.G. H.G.
448.1 100.0 83.2 At2g32310 817792 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF O.I. C.G. H.G.
446.8 100.0 45.6 At1g35900 840492 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
445.8 100.0 34.9 At2g27250 817267 CLV3 (CLAVATA3) One of the three CLAVATA genes controlling the size of the shoot apical meristem (SAM) in Arabidopsis. Belongs to a large gene family called CLE for CLAVATA3/ESR-related. Encodes a stem cell-specific protein CLV3 presumed to be a precursor of a secreted peptide hormone. The deduced ORF encodes a 96-amino acid protein with an 18-amino acid N-terminal signal peptide. The functional form of CLV3 (MCLV3) is a posttranscriptionally modified 12-amino acid peptide, in which two of the three prolines were modified to hydroxyproline. CLV3 binds the ectodomain of the CLAVATA1 (CLV1) receptor-kinase. Regulates shoot and floral meristem development. Required for CLAVATA1 receptor-like kinase assembly into a signaling complex that includes KAPP and a Rho-related protein. It restricts its own domain of expression, the central zone (CZ) of the shoot apical meristem (SAM), by preventing differentiation of peripheral zone cells, which surround the CZ, into CZ cells and restricts overall SAM size by a separate, long-range effect on cell division rate. CLE domain of CLV3 is sufficient for function. O.I. C.G. H.G.
440.1 100.0 48.7 At1g31510 840041 F-box family protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
439.5 100.0 81.6 At3g61730 825346 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
438.6 100.0 35.3 At5g46120 834654 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
436.4 100.0 33.2 At2g20510 816572 ATTIM44-1 One of two loci encoding the TIM44 subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is the part of the complex that hydrolyzes ATP to provide energy for protein translocation to the inner membrane. O.I. C.G. H.G.
435.4 100.0 25.1 At5g45180 834554 flavin-containing monooxygenase family protein / FMO family protein F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:unknown;C:unknown;BOFMP O.I. C.G. H.G.
433.0 100.0 47.2 At2g36040 818177 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
431.8 100.0 39.1 At2g24620 816998 S-locus glycoprotein family protein F:unknown;P:recognition of pollen;C:cellular_component unknown;P O.I. C.G. H.G.
429.9 100.0 61.9 At1g59950 842289 aldo/keto reductase, putative F:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPA O.I. C.G. H.G.
429.7 100.0 53.8 At2g42370 818838 unknown protein F:unknown;P:unknown;C:cellular_component unknown;MOPBFA O.I. C.G. H.G.
428.9 100.0 134.0 At4g22020 3770103 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
425.5 100.0 68.9 At5g60320 836154 lectin protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
423.4 100.0 21.9 At1g62160 3767608 serine-type endopeptidase inhibitor F:serine-type endopeptidase inhibitor activity;P:unknown;C:unknown O.I. C.G. H.G.
422.0 100.0 67.1 At5g16430 831504 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
420.5 100.0 79.5 At5g66370 836769 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POF O.I. C.G. H.G.
417.6 100.0 60.1 At4g13740 - - O.I. C.G. H.G.
414.4 100.0 52.1 At3g29420 822603 geranylgeranyl pyrophosphate synthase-related / GGPP synthetase-related / farnesyltranstransferase-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
413.1 100.0 95.1 At3g22000 821760 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
412.7 100.0 28.7 At5g46010 834641 homeobox-leucine zipper transcription factor family protein F:transcription factor activity;P:regulation of transcription;C:vacuole;P O.I. C.G. H.G.
411.8 100.0 43.0 At5g01440 831886 insulin-degrading enzyme-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOB O.I. C.G. H.G.
410.5 100.0 61.8 At4g18490 827581 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPA O.I. C.G. H.G.
409.3 100.0 61.4 At2g34230 817984 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB O.I. C.G. H.G.
408.0 100.0 43.3 At1g50800 841502 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOMFV O.I. C.G. H.G.
407.0 100.0 44.3 At2g17960 816306 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
405.5 100.0 50.6 At1g48820 841304 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PO O.I. C.G. H.G.
404.6 100.0 19.4 At1g12490 837806 F-box family protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
404.2 100.0 31.4 At3g06630 819842 protein kinase family protein F:two-component sensor activity, protein serine/threonine kinase activity, protein kinase activity, signal transducer activity, ATP binding;P:signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay);C:unknown;MPOBFVA O.I. C.G. H.G.
403.5 100.0 55.0 At1g50280 841450 phototropic-responsive NPH3 family protein F:protein binding, signal transducer activity;P:response to light stimulus;C:cellular_component unknown;P O.I. C.G. H.G.
401.7 100.0 72.5 At5g15840 831441 CO (CONSTANS) Encodes a protein showing similarities to zinc finger transcription factors, involved in regulation of flowering under long days. Acts upstream of FT and SOC1. O.I. C.G. H.G.
401.1 100.0 26.7 At2g28700 817419 AGL46 (AGAMOUS-LIKE 46) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOFB O.I. C.G. H.G.
398.7 100.0 58.7 At5g27570 832817 WD-40 repeat family protein F:signal transducer activity;P:signal transduction;C:CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex;MFBOPA O.I. C.G. H.G.
397.7 100.0 87.4 At5g59260 836044 lectin protein kinase, putative F:protein serine/threonine kinase activity, sugar binding, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
397.7 100.0 76.5 At3g30730 822811 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
395.1 100.0 83.8 At4g22065 3769974 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
393.8 100.0 38.7 At2g13900 815874 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO O.I. C.G. H.G.
392.7 100.0 24.8 At4g10880 826687 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
391.8 100.0 50.1 At2g11140 3768371 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
390.2 100.0 36.6 At1g11920 837742 pectate lyase family protein F:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO O.I. C.G. H.G.
389.5 100.0 83.6 At4g01030 827926 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:cellular_component unknown;POMFBA O.I. C.G. H.G.
385.2 100.0 34.7 At3g45950 823738 splicing factor-related F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MFOP O.I. C.G. H.G.
384.8 100.0 55.2 At1g19030 838485 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
384.8 100.0 40.6 At2g15600 816053 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
384.8 100.0 24.2 At5g23790 832444 AtGolS5 (Arabidopsis thaliana galactinol synthase 5) F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFBVO O.I. C.G. H.G.
384.4 100.0 53.2 At1g07190 837230 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFO O.I. C.G. H.G.
383.0 100.0 42.9 At5g18160 831934 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
382.9 100.0 56.0 At2g46980 819312 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPV O.I. C.G. H.G.
382.4 100.0 44.2 At1g46912 841119 F-box family protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
381.6 100.0 33.9 At2g36610 818233 ATHB22 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. O.I. C.G. H.G.
381.5 100.0 35.2 At3g17290 3768761 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
381.2 100.0 61.4 At1g07860 837301 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
380.8 100.0 39.1 At5g35800 3771304 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
380.3 100.0 39.1 At4g20510 827799 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
379.1 100.0 77.8 At1g22275 838834 ZYP1b One of two nearly identical proteins (ZYP1a) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility. O.I. C.G. H.G.
378.5 100.0 34.7 At5g09940 830855 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
376.2 100.0 61.3 At1g33830 840278 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein F:GTP binding;P:response to bacterium;C:cellular_component unknown;MPOB O.I. C.G. H.G.
375.6 100.0 30.9 At4g08560 826417 APUM15 (Arabidopsis Pumilio 15) F:RNA binding, binding;P:unknown;C:endomembrane system;FMOP O.I. C.G. H.G.
374.3 100.0 49.3 At2g15450 816037 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
373.6 100.0 32.3 At1g48390 841259 syntaxin-related family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
373.6 100.0 32.0 At1g58190 842186 AtRLP9 (Receptor Like Protein 9) F:protein binding;P:signal transduction;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
372.2 100.0 33.5 At3g28620 822492 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
964.5	100.0	113.3	At3g13240	820523	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	O.I.	C.G.	H.G.
748.0	100.0	45.7	At3g16020	820847	phospholipase C	F:phospholipase C activity;P:intracellular signaling cascade, lipid metabolic process;C:cellular_component unknown;P	O.I.	C.G.	H.G.
653.0	100.0	38.0	At5g37240	833698	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
637.8	100.0	55.9	At5g50910	835163	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
610.9	100.0	52.7	At5g27810	832843	sequence-specific DNA binding / transcription factor	F:transcription factor activity, sequence-specific DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;P	O.I.	C.G.	H.G.
603.6	100.0	74.3	At5g53960	835479	ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)	F:DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding;P:DNA topological change, DNA metabolic process;C:plasma membrane;POM	O.I.	C.G.	H.G.
562.6	100.0	89.0	At2g15070	3767890	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
558.3	100.0	89.3	At3g26240	822226	DC1 domain-containing protein	F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMBOF	O.I.	C.G.	H.G.
550.4	100.0	55.6	At5g46000	834640	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
547.8	100.0	32.7	At2g41450	818743	N-acetyltransferase	F:N-acetyltransferase activity;P:metabolic process;C:intracellular;MOPFB	O.I.	C.G.	H.G.
545.3	100.0	51.9	At1g72080	843539	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOFPBVA	O.I.	C.G.	H.G.
543.1	100.0	50.2	At5g02330	831755	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO	O.I.	C.G.	H.G.
538.8	100.0	59.5	At2g22750	816805	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
534.5	100.0	35.5	At4g04410	3769846	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
530.6	100.0	42.3	At5g17080	831571	cathepsin-related	F:cysteine-type peptidase activity;P:unknown;C:cellular_component unknown;MOPV	O.I.	C.G.	H.G.
528.2	100.0	22.1	At3g28190	822445	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system	O.I.	C.G.	H.G.
527.3	100.0	30.1	At5g32490	3771040	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
524.2	100.0	29.7	At3g55670	824733	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
523.4	100.0	46.6	At2g24140	816948	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOPFBAV	O.I.	C.G.	H.G.
519.2	100.0	28.3	At2g11130	3768370	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
515.6	100.0	51.0	At1g27285	3766803	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
513.9	100.0	39.0	At2g11270	815597	citrate synthase-related	F:transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer;P:cellular carbohydrate metabolic process;C:cellular_component unknown;MP	O.I.	C.G.	H.G.
504.2	100.0	60.4	At3g54310	824598	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
495.2	100.0	70.2	At3g25185		-	-	O.I.	C.G.	H.G.
494.3	100.0	55.6	At2g06950	3768536	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
490.8	100.0	100.2	At1g65210	842828	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB	O.I.	C.G.	H.G.
490.3	100.0	30.0	At1g13310	837891	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
488.3	100.0	53.8	At3g28350	822464	-	Pseudogene of AT3G28350; unknown protein	O.I.	C.G.	H.G.
487.9	100.0	27.1	At3g28240	822450	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
485.8	100.0	57.0	At1g58300	842199	ho4 (HEME OXYGENASE 4)	Encodes a member (HO4) of the heme oxygenase family.	O.I.	C.G.	H.G.
484.8	100.0	31.4	At3g50170	824179	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
479.3	100.0	35.2	At3g60560	825227	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
476.4	100.0	46.6	At4g20220	827769	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
456.3	100.0	39.9	At1g54470	841889	RPP27 (resistance to Peronospora parasitica 27)	Encodes a Cf-like gene in Arabidopsis that confers downy mildew resistance to several isolates of Peronospora parasitica.	O.I.	C.G.	H.G.
456.0	100.0	43.9	At1g67450	843065	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
455.2	100.0	33.1	At2g02660	814795	-	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PM	O.I.	C.G.	H.G.
449.8	100.0	64.1	At2g23040	816834	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
448.5	100.0	30.2	At4g19850	827729	ATPP2-A2	encodes a protein similar to phloem protein 2 in cucumber. a member of a large gene family.	O.I.	C.G.	H.G.
448.1	100.0	83.2	At2g32310	817792	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF	O.I.	C.G.	H.G.
446.8	100.0	45.6	At1g35900	840492	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
445.8	100.0	34.9	At2g27250	817267	CLV3 (CLAVATA3)	One of the three CLAVATA genes controlling the size of the shoot apical meristem (SAM) in Arabidopsis. Belongs to a large gene family called CLE for CLAVATA3/ESR-related. Encodes a stem cell-specific protein CLV3 presumed to be a precursor of a secreted peptide hormone. The deduced ORF encodes a 96-amino acid protein with an 18-amino acid N-terminal signal peptide. The functional form of CLV3 (MCLV3) is a posttranscriptionally modified 12-amino acid peptide, in which two of the three prolines were modified to hydroxyproline. CLV3 binds the ectodomain of the CLAVATA1 (CLV1) receptor-kinase. Regulates shoot and floral meristem development. Required for CLAVATA1 receptor-like kinase assembly into a signaling complex that includes KAPP and a Rho-related protein. It restricts its own domain of expression, the central zone (CZ) of the shoot apical meristem (SAM), by preventing differentiation of peripheral zone cells, which surround the CZ, into CZ cells and restricts overall SAM size by a separate, long-range effect on cell division rate. CLE domain of CLV3 is sufficient for function.	O.I.	C.G.	H.G.
440.1	100.0	48.7	At1g31510	840041	F-box family protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
439.5	100.0	81.6	At3g61730	825346	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
438.6	100.0	35.3	At5g46120	834654	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
436.4	100.0	33.2	At2g20510	816572	ATTIM44-1	One of two loci encoding the TIM44 subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is the part of the complex that hydrolyzes ATP to provide energy for protein translocation to the inner membrane.	O.I.	C.G.	H.G.
435.4	100.0	25.1	At5g45180	834554	flavin-containing monooxygenase family protein / FMO family protein	F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:unknown;C:unknown;BOFMP	O.I.	C.G.	H.G.
433.0	100.0	47.2	At2g36040	818177	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
431.8	100.0	39.1	At2g24620	816998	S-locus glycoprotein family protein	F:unknown;P:recognition of pollen;C:cellular_component unknown;P	O.I.	C.G.	H.G.
429.9	100.0	61.9	At1g59950	842289	aldo/keto reductase, putative	F:oxidoreductase activity;P:oxidation reduction;C:unknown;BMOFPA	O.I.	C.G.	H.G.
429.7	100.0	53.8	At2g42370	818838	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;MOPBFA	O.I.	C.G.	H.G.
428.9	100.0	134.0	At4g22020	3770103	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
425.5	100.0	68.9	At5g60320	836154	lectin protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
423.4	100.0	21.9	At1g62160	3767608	serine-type endopeptidase inhibitor	F:serine-type endopeptidase inhibitor activity;P:unknown;C:unknown	O.I.	C.G.	H.G.
422.0	100.0	67.1	At5g16430	831504	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
420.5	100.0	79.5	At5g66370	836769	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POF	O.I.	C.G.	H.G.
417.6	100.0	60.1	At4g13740		-	-	O.I.	C.G.	H.G.
414.4	100.0	52.1	At3g29420	822603	geranylgeranyl pyrophosphate synthase-related / GGPP synthetase-related / farnesyltranstransferase-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
413.1	100.0	95.1	At3g22000	821760	receptor-like protein kinase-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
412.7	100.0	28.7	At5g46010	834641	homeobox-leucine zipper transcription factor family protein	F:transcription factor activity;P:regulation of transcription;C:vacuole;P	O.I.	C.G.	H.G.
411.8	100.0	43.0	At5g01440	831886	insulin-degrading enzyme-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOB	O.I.	C.G.	H.G.
410.5	100.0	61.8	At4g18490	827581	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPA	O.I.	C.G.	H.G.
409.3	100.0	61.4	At2g34230	817984	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB	O.I.	C.G.	H.G.
408.0	100.0	43.3	At1g50800	841502	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOMFV	O.I.	C.G.	H.G.
407.0	100.0	44.3	At2g17960	816306	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
405.5	100.0	50.6	At1g48820	841304	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PO	O.I.	C.G.	H.G.
404.6	100.0	19.4	At1g12490	837806	F-box family protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
404.2	100.0	31.4	At3g06630	819842	protein kinase family protein	F:two-component sensor activity, protein serine/threonine kinase activity, protein kinase activity, signal transducer activity, ATP binding;P:signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay);C:unknown;MPOBFVA	O.I.	C.G.	H.G.
403.5	100.0	55.0	At1g50280	841450	phototropic-responsive NPH3 family protein	F:protein binding, signal transducer activity;P:response to light stimulus;C:cellular_component unknown;P	O.I.	C.G.	H.G.
401.7	100.0	72.5	At5g15840	831441	CO (CONSTANS)	Encodes a protein showing similarities to zinc finger transcription factors, involved in regulation of flowering under long days. Acts upstream of FT and SOC1.	O.I.	C.G.	H.G.
401.1	100.0	26.7	At2g28700	817419	AGL46 (AGAMOUS-LIKE 46)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOFB	O.I.	C.G.	H.G.
398.7	100.0	58.7	At5g27570	832817	WD-40 repeat family protein	F:signal transducer activity;P:signal transduction;C:CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex;MFBOPA	O.I.	C.G.	H.G.
397.7	100.0	87.4	At5g59260	836044	lectin protein kinase, putative	F:protein serine/threonine kinase activity, sugar binding, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
397.7	100.0	76.5	At3g30730	822811	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
395.1	100.0	83.8	At4g22065	3769974	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
393.8	100.0	38.7	At2g13900	815874	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO	O.I.	C.G.	H.G.
392.7	100.0	24.8	At4g10880	826687	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
391.8	100.0	50.1	At2g11140	3768371	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
390.2	100.0	36.6	At1g11920	837742	pectate lyase family protein	F:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO	O.I.	C.G.	H.G.
389.5	100.0	83.6	At4g01030	827926	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;POMFBA	O.I.	C.G.	H.G.
385.2	100.0	34.7	At3g45950	823738	splicing factor-related	F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
384.8	100.0	55.2	At1g19030	838485	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
384.8	100.0	40.6	At2g15600	816053	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
384.8	100.0	24.2	At5g23790	832444	AtGolS5 (Arabidopsis thaliana galactinol synthase 5)	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFBVO	O.I.	C.G.	H.G.
384.4	100.0	53.2	At1g07190	837230	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFO	O.I.	C.G.	H.G.
383.0	100.0	42.9	At5g18160	831934	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
382.9	100.0	56.0	At2g46980	819312	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPV	O.I.	C.G.	H.G.
382.4	100.0	44.2	At1g46912	841119	F-box family protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
381.6	100.0	33.9	At2g36610	818233	ATHB22 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.	O.I.	C.G.	H.G.
381.5	100.0	35.2	At3g17290	3768761	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
381.2	100.0	61.4	At1g07860	837301	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
380.8	100.0	39.1	At5g35800	3771304	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
380.3	100.0	39.1	At4g20510	827799	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
379.1	100.0	77.8	At1g22275	838834	ZYP1b	One of two nearly identical proteins (ZYP1a) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.	O.I.	C.G.	H.G.
378.5	100.0	34.7	At5g09940	830855	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
376.2	100.0	61.3	At1g33830	840278	avirulence-responsive family protein / avirulence induced gene (AIG1) family protein	F:GTP binding;P:response to bacterium;C:cellular_component unknown;MPOB	O.I.	C.G.	H.G.
375.6	100.0	30.9	At4g08560	826417	APUM15 (Arabidopsis Pumilio 15)	F:RNA binding, binding;P:unknown;C:endomembrane system;FMOP	O.I.	C.G.	H.G.
374.3	100.0	49.3	At2g15450	816037	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
373.6	100.0	32.3	At1g48390	841259	syntaxin-related family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
373.6	100.0	32.0	At1g58190	842186	AtRLP9 (Receptor Like Protein 9)	F:protein binding;P:signal transduction;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
372.2	100.0	33.5	At3g28620	822492	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB	O.I.	C.G.	H.G.

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GSM ID	GSM143309
Assay name	Tsu_genomic_hyb_2
GSE experiment	GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

Microarray experiments to specifically-expressed genes

GSM ID GSM143309 Assay name Tsu_genomic_hyb_2 GSE experiment GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

GSM ID GSM143309

Assay name Tsu_genomic_hyb_2

GSE experiment GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1