CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM143308

Assay name Tsu_genomic_hyb_3

GSE experiment GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
872.4 100.0 107.7 At3g13240 820523 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown O.I. C.G. H.G.
661.5 100.0 71.1 At1g21530 838754 AMP-binding protein, putative F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
589.5 100.0 73.4 At5g53960 835479 ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing) F:DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding;P:DNA topological change, DNA metabolic process;C:plasma membrane;POM O.I. C.G. H.G.
578.2 100.0 40.2 At3g16020 820847 phospholipase C F:phospholipase C activity;P:intracellular signaling cascade, lipid metabolic process;C:cellular_component unknown;P O.I. C.G. H.G.
566.5 100.0 64.8 At4g21200 827868 GA2OX8 (GIBBERELLIN 2-OXIDASE 8) Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins. O.I. C.G. H.G.
545.0 100.0 30.1 At4g35820 829736 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:protein metabolic process, peptidyl-proline hydroxylation to 4-hydroxy-L-proline;C:unknown;MOPBFV O.I. C.G. H.G.
530.6 100.0 40.0 At2g36610 818233 ATHB22 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. O.I. C.G. H.G.
523.9 100.0 35.5 At2g02660 814795 - F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PM O.I. C.G. H.G.
494.9 100.0 45.3 At2g24140 816948 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MOPFBAV O.I. C.G. H.G.
493.4 100.0 21.3 At3g28190 822445 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system O.I. C.G. H.G.
490.9 100.0 69.8 At3g25185 - - O.I. C.G. H.G.
485.3 100.0 64.7 At2g26790 817220 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:mitochondrion;POMFBAV O.I. C.G. H.G.
479.2 100.0 32.6 At5g37240 833698 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
479.2 100.0 27.2 At2g11130 3768370 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
477.5 100.0 55.7 At2g15450 816037 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
472.2 100.0 46.4 At4g20220 827769 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
471.0 100.0 41.1 At3g30400 3769078 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
468.3 100.0 46.6 At5g02330 831755 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO O.I. C.G. H.G.
465.1 100.0 39.6 At5g17080 831571 cathepsin-related F:cysteine-type peptidase activity;P:unknown;C:cellular_component unknown;MOPV O.I. C.G. H.G.
459.9 100.0 48.3 At3g17050 3768842 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
459.4 100.0 50.8 At5g46000 834640 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
458.2 100.0 84.1 At2g32310 817792 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF O.I. C.G. H.G.
455.9 100.0 41.8 At3g42590 823271 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
454.6 100.0 58.8 At1g62890 842590 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
450.0 100.0 27.8 At5g32490 3771040 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
449.0 100.0 33.7 At2g20510 816572 ATTIM44-1 One of two loci encoding the TIM44 subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is the part of the complex that hydrolyzes ATP to provide energy for protein translocation to the inner membrane. O.I. C.G. H.G.
446.9 100.0 34.0 At3g60560 825227 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
444.1 100.0 52.5 At3g10750 820244 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
438.9 100.0 25.7 At3g28240 822450 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
434.7 100.0 32.5 At3g06630 819842 protein kinase family protein F:two-component sensor activity, protein serine/threonine kinase activity, protein kinase activity, signal transducer activity, ATP binding;P:signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay);C:unknown;MPOBFVA O.I. C.G. H.G.
433.6 100.0 46.8 At1g27285 3766803 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
433.5 100.0 42.0 At3g55210 824687 anac063 (Arabidopsis NAC domain containing protein 63) F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PO O.I. C.G. H.G.
430.0 100.0 69.3 At5g60320 836154 lectin protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
429.7 100.0 43.9 At1g03720 839426 cathepsin-related F:cysteine-type peptidase activity;P:proteolysis;C:cellular_component unknown;MOPVBA O.I. C.G. H.G.
428.5 100.0 82.8 At4g23090 828408 unknown protein F:molecular_function unknown;P:unknown;C:cellular_component unknown;P O.I. C.G. H.G.
425.6 100.0 68.6 At1g03540 839466 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:unknown;POFMB O.I. C.G. H.G.
425.0 100.0 64.9 At4g20990 827846 ACA4 (ALPHA CARBONIC ANHYDRASE 4) F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process;C:chloroplast thylakoid membrane;MBPOFV O.I. C.G. H.G.
421.3 100.0 43.8 At5g27810 832843 sequence-specific DNA binding / transcription factor F:transcription factor activity, sequence-specific DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;P O.I. C.G. H.G.
418.0 100.0 37.1 At2g02620 814791 DC1 domain-containing protein / PHD finger protein-related F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:intracellular;POM O.I. C.G. H.G.
417.0 100.0 76.3 At3g45570 823699 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFV O.I. C.G. H.G.
408.0 100.0 94.5 At3g22000 821760 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
407.0 100.0 29.0 At1g11610 837705 CYP71A18 putative cytochrome P450 O.I. C.G. H.G.
406.0 100.0 33.2 At2g44195 819027 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
405.9 100.0 45.9 At2g40250 818617 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
405.7 100.0 61.0 At3g20180 821562 metal ion binding F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P O.I. C.G. H.G.
404.7 100.0 65.7 At5g16430 831504 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
403.8 100.0 61.0 At2g34230 817984 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB O.I. C.G. H.G.
403.1 100.0 41.5 At2g15600 816053 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
402.7 100.0 62.6 At2g22070 816742 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB O.I. C.G. H.G.
402.3 100.0 34.3 At3g24540 822050 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
399.0 100.0 62.0 At1g08020 - - O.I. C.G. H.G.
398.6 100.0 27.5 At1g19390 838522 wall-associated kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system, integral to membrane;MPOBFVA O.I. C.G. H.G.
398.2 100.0 57.1 At4g21360 3770133 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
397.5 100.0 54.6 At1g50280 841450 phototropic-responsive NPH3 family protein F:protein binding, signal transducer activity;P:response to light stimulus;C:cellular_component unknown;P O.I. C.G. H.G.
397.1 100.0 43.0 At1g35900 840492 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
396.7 100.0 54.2 At3g06970 819882 RNA binding / nucleic acid binding / nucleotide binding F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFBV O.I. C.G. H.G.
396.0 100.0 33.6 At5g46120 834654 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
393.8 100.0 61.5 At3g03290 821301 universal stress protein (USP) family protein F:molecular_function unknown;P:response to stress;C:unknown;PMOF O.I. C.G. H.G.
393.6 100.0 79.3 At1g22275 838834 ZYP1b One of two nearly identical proteins (ZYP1a) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility. O.I. C.G. H.G.
393.6 100.0 50.1 At1g25270 839110 - F:unknown;P:unknown;C:endomembrane system, membrane;PBOFAM O.I. C.G. H.G.
390.5 100.0 126.5 At2g07749 815342 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;VPF O.I. C.G. H.G.
388.6 100.0 43.6 At5g50910 835163 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
387.9 100.0 36.7 At1g47680 841178 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
386.3 100.0 43.1 At5g48550 834911 F-box family protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
386.0 100.0 51.0 At3g47840 823940 pentatricopeptide (PPR) repeat-containing protein F:binding;P:biological_process unknown;C:unknown;POMFB O.I. C.G. H.G.
385.1 100.0 33.4 At1g71290 843470 F-box family protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
384.2 100.0 49.0 At2g06950 3768536 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
384.2 100.0 47.7 At3g28350 822464 - Pseudogene of AT3G28350; unknown protein O.I. C.G. H.G.
383.0 100.0 83.5 At3g42100 823181 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
382.3 100.0 20.8 At1g62160 3767608 serine-type endopeptidase inhibitor F:serine-type endopeptidase inhibitor activity;P:unknown;C:unknown O.I. C.G. H.G.
381.9 100.0 59.8 At1g32650 840159 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown O.I. C.G. H.G.
380.7 100.0 41.8 At1g50800 841502 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOMFV O.I. C.G. H.G.
378.9 100.0 44.2 At2g36040 818177 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
377.0 100.0 53.4 At5g06900 830580 CYP93D1 member of CYP93D O.I. C.G. H.G.
375.7 100.0 51.8 At2g14010 815885 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
375.7 100.0 38.4 At1g35480 3766947 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
373.5 100.0 37.9 At3g53290 824496 CYP71B30P missing N-term 80 AA not found between end of 71B5 and start of this sequence probably a pseudogene, from http://drnelson.utmem.edu/biblioD.html O.I. C.G. H.G.
373.4 100.0 46.4 At2g24410 816977 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
373.1 100.0 54.3 At5g38320 833814 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
372.6 100.0 87.3 At1g65210 842828 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB O.I. C.G. H.G.
372.1 100.0 40.6 At5g56470 835748 FAD-dependent oxidoreductase family protein F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity;P:biological_process unknown;C:membrane;BPMOF O.I. C.G. H.G.
371.9 100.0 36.0 At1g54470 841889 RPP27 (resistance to Peronospora parasitica 27) Encodes a Cf-like gene in Arabidopsis that confers downy mildew resistance to several isolates of Peronospora parasitica. O.I. C.G. H.G.
371.7 100.0 38.5 At4g21950 828284 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
371.3 100.0 32.6 At3g16160 820861 transcription factor F:transcription factor activity;P:unknown;C:cellular_component unknown;OMP O.I. C.G. H.G.
370.6 100.0 45.6 At1g51480 841573 disease resistance protein (CC-NBS-LRR class), putative F:protein binding, ATP binding;P:defense response, apoptosis;C:cellular_component unknown;PMBOFA O.I. C.G. H.G.
369.0 100.0 42.7 At1g72080 843539 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOFPBVA O.I. C.G. H.G.
368.6 100.0 47.8 At4g33990 829546 EMB2758 (embryo defective 2758) F:unknown;P:embryonic development ending in seed dormancy;C:mitochondrion;POMFB O.I. C.G. H.G.
368.1 100.0 42.8 At3g44240 823549 CCR4-NOT transcription complex protein, putative F:ribonuclease activity, nucleic acid binding;P:RNA modification;C:nucleus;MPOF O.I. C.G. H.G.
367.8 100.0 33.5 At1g65740 842885 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
367.5 100.0 57.2 At2g22350 816767 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
367.2 100.0 103.7 At1g12720 3766711 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
366.9 100.0 30.5 At4g08560 826417 APUM15 (Arabidopsis Pumilio 15) F:RNA binding, binding;P:unknown;C:endomembrane system;FMOP O.I. C.G. H.G.
364.3 100.0 19.5 At2g25230 817061 MYB100 (myb domain protein 100) Encodes a putative transcription factor (MYB100). O.I. C.G. H.G.
363.6 100.0 48.4 At1g23450 838953 - pentatricopeptide (PPR) repeat-containing protein O.I. C.G. H.G.
363.1 100.0 119.0 At2g07713 815387 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
361.9 100.0 33.2 At1g62410 842539 MIF4G domain-containing protein F:translation initiation factor activity;P:translation, RNA metabolic process;C:endomembrane system;MOFP O.I. C.G. H.G.
361.4 100.0 23.1 At2g31910 817749 ATCHX21 (CATION/H+ EXCHANGER 21) member of Putative Na+/H+ antiporter family O.I. C.G. H.G.
361.3 100.0 30.1 At4g07515 826202 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
361.1 100.0 58.6 At2g16870 816188 disease resistance protein (TIR-NBS-LRR class), putative F:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFA O.I. C.G. H.G.
361.0 100.0 29.8 At5g49290 834989 protein binding F:protein binding;P:signal transduction;C:unknown;PMBOFVA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
872.4	100.0	107.7	At3g13240	820523	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	O.I.	C.G.	H.G.
661.5	100.0	71.1	At1g21530	838754	AMP-binding protein, putative	F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
589.5	100.0	73.4	At5g53960	835479	ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)	F:DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, ATP binding;P:DNA topological change, DNA metabolic process;C:plasma membrane;POM	O.I.	C.G.	H.G.
578.2	100.0	40.2	At3g16020	820847	phospholipase C	F:phospholipase C activity;P:intracellular signaling cascade, lipid metabolic process;C:cellular_component unknown;P	O.I.	C.G.	H.G.
566.5	100.0	64.8	At4g21200	827868	GA2OX8 (GIBBERELLIN 2-OXIDASE 8)	Encodes a protein with gibberellin 2-oxidase activity which acts specifically on C-20 gibberellins.	O.I.	C.G.	H.G.
545.0	100.0	30.1	At4g35820	829736	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:protein metabolic process, peptidyl-proline hydroxylation to 4-hydroxy-L-proline;C:unknown;MOPBFV	O.I.	C.G.	H.G.
530.6	100.0	40.0	At2g36610	818233	ATHB22 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 22)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.	O.I.	C.G.	H.G.
523.9	100.0	35.5	At2g02660	814795	-	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PM	O.I.	C.G.	H.G.
494.9	100.0	45.3	At2g24140	816948	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOPFBAV	O.I.	C.G.	H.G.
493.4	100.0	21.3	At3g28190	822445	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system	O.I.	C.G.	H.G.
490.9	100.0	69.8	At3g25185		-	-	O.I.	C.G.	H.G.
485.3	100.0	64.7	At2g26790	817220	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:biological_process unknown;C:mitochondrion;POMFBAV	O.I.	C.G.	H.G.
479.2	100.0	32.6	At5g37240	833698	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
479.2	100.0	27.2	At2g11130	3768370	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
477.5	100.0	55.7	At2g15450	816037	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
472.2	100.0	46.4	At4g20220	827769	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
471.0	100.0	41.1	At3g30400	3769078	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
468.3	100.0	46.6	At5g02330	831755	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO	O.I.	C.G.	H.G.
465.1	100.0	39.6	At5g17080	831571	cathepsin-related	F:cysteine-type peptidase activity;P:unknown;C:cellular_component unknown;MOPV	O.I.	C.G.	H.G.
459.9	100.0	48.3	At3g17050	3768842	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
459.4	100.0	50.8	At5g46000	834640	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
458.2	100.0	84.1	At2g32310	817792	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF	O.I.	C.G.	H.G.
455.9	100.0	41.8	At3g42590	823271	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
454.6	100.0	58.8	At1g62890	842590	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
450.0	100.0	27.8	At5g32490	3771040	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
449.0	100.0	33.7	At2g20510	816572	ATTIM44-1	One of two loci encoding the TIM44 subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is the part of the complex that hydrolyzes ATP to provide energy for protein translocation to the inner membrane.	O.I.	C.G.	H.G.
446.9	100.0	34.0	At3g60560	825227	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
444.1	100.0	52.5	At3g10750	820244	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
438.9	100.0	25.7	At3g28240	822450	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
434.7	100.0	32.5	At3g06630	819842	protein kinase family protein	F:two-component sensor activity, protein serine/threonine kinase activity, protein kinase activity, signal transducer activity, ATP binding;P:signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay);C:unknown;MPOBFVA	O.I.	C.G.	H.G.
433.6	100.0	46.8	At1g27285	3766803	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
433.5	100.0	42.0	At3g55210	824687	anac063 (Arabidopsis NAC domain containing protein 63)	F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
430.0	100.0	69.3	At5g60320	836154	lectin protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
429.7	100.0	43.9	At1g03720	839426	cathepsin-related	F:cysteine-type peptidase activity;P:proteolysis;C:cellular_component unknown;MOPVBA	O.I.	C.G.	H.G.
428.5	100.0	82.8	At4g23090	828408	unknown protein	F:molecular_function unknown;P:unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
425.6	100.0	68.6	At1g03540	839466	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:biological_process unknown;C:unknown;POFMB	O.I.	C.G.	H.G.
425.0	100.0	64.9	At4g20990	827846	ACA4 (ALPHA CARBONIC ANHYDRASE 4)	F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process;C:chloroplast thylakoid membrane;MBPOFV	O.I.	C.G.	H.G.
421.3	100.0	43.8	At5g27810	832843	sequence-specific DNA binding / transcription factor	F:transcription factor activity, sequence-specific DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;P	O.I.	C.G.	H.G.
418.0	100.0	37.1	At2g02620	814791	DC1 domain-containing protein / PHD finger protein-related	F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:intracellular;POM	O.I.	C.G.	H.G.
417.0	100.0	76.3	At3g45570	823699	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFV	O.I.	C.G.	H.G.
408.0	100.0	94.5	At3g22000	821760	receptor-like protein kinase-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
407.0	100.0	29.0	At1g11610	837705	CYP71A18	putative cytochrome P450	O.I.	C.G.	H.G.
406.0	100.0	33.2	At2g44195	819027	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
405.9	100.0	45.9	At2g40250	818617	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
405.7	100.0	61.0	At3g20180	821562	metal ion binding	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P	O.I.	C.G.	H.G.
404.7	100.0	65.7	At5g16430	831504	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
403.8	100.0	61.0	At2g34230	817984	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB	O.I.	C.G.	H.G.
403.1	100.0	41.5	At2g15600	816053	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
402.7	100.0	62.6	At2g22070	816742	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB	O.I.	C.G.	H.G.
402.3	100.0	34.3	At3g24540	822050	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
399.0	100.0	62.0	At1g08020		-	-	O.I.	C.G.	H.G.
398.6	100.0	27.5	At1g19390	838522	wall-associated kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system, integral to membrane;MPOBFVA	O.I.	C.G.	H.G.
398.2	100.0	57.1	At4g21360	3770133	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
397.5	100.0	54.6	At1g50280	841450	phototropic-responsive NPH3 family protein	F:protein binding, signal transducer activity;P:response to light stimulus;C:cellular_component unknown;P	O.I.	C.G.	H.G.
397.1	100.0	43.0	At1g35900	840492	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
396.7	100.0	54.2	At3g06970	819882	RNA binding / nucleic acid binding / nucleotide binding	F:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFBV	O.I.	C.G.	H.G.
396.0	100.0	33.6	At5g46120	834654	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
393.8	100.0	61.5	At3g03290	821301	universal stress protein (USP) family protein	F:molecular_function unknown;P:response to stress;C:unknown;PMOF	O.I.	C.G.	H.G.
393.6	100.0	79.3	At1g22275	838834	ZYP1b	One of two nearly identical proteins (ZYP1a) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.	O.I.	C.G.	H.G.
393.6	100.0	50.1	At1g25270	839110	-	F:unknown;P:unknown;C:endomembrane system, membrane;PBOFAM	O.I.	C.G.	H.G.
390.5	100.0	126.5	At2g07749	815342	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;VPF	O.I.	C.G.	H.G.
388.6	100.0	43.6	At5g50910	835163	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
387.9	100.0	36.7	At1g47680	841178	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
386.3	100.0	43.1	At5g48550	834911	F-box family protein-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
386.0	100.0	51.0	At3g47840	823940	pentatricopeptide (PPR) repeat-containing protein	F:binding;P:biological_process unknown;C:unknown;POMFB	O.I.	C.G.	H.G.
385.1	100.0	33.4	At1g71290	843470	F-box family protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
384.2	100.0	49.0	At2g06950	3768536	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
384.2	100.0	47.7	At3g28350	822464	-	Pseudogene of AT3G28350; unknown protein	O.I.	C.G.	H.G.
383.0	100.0	83.5	At3g42100	823181	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
382.3	100.0	20.8	At1g62160	3767608	serine-type endopeptidase inhibitor	F:serine-type endopeptidase inhibitor activity;P:unknown;C:unknown	O.I.	C.G.	H.G.
381.9	100.0	59.8	At1g32650	840159	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	O.I.	C.G.	H.G.
380.7	100.0	41.8	At1g50800	841502	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOMFV	O.I.	C.G.	H.G.
378.9	100.0	44.2	At2g36040	818177	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
377.0	100.0	53.4	At5g06900	830580	CYP93D1	member of CYP93D	O.I.	C.G.	H.G.
375.7	100.0	51.8	At2g14010	815885	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
375.7	100.0	38.4	At1g35480	3766947	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
373.5	100.0	37.9	At3g53290	824496	CYP71B30P	missing N-term 80 AA not found between end of 71B5 and start of this sequence probably a pseudogene, from http://drnelson.utmem.edu/biblioD.html	O.I.	C.G.	H.G.
373.4	100.0	46.4	At2g24410	816977	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
373.1	100.0	54.3	At5g38320	833814	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
372.6	100.0	87.3	At1g65210	842828	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB	O.I.	C.G.	H.G.
372.1	100.0	40.6	At5g56470	835748	FAD-dependent oxidoreductase family protein	F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity;P:biological_process unknown;C:membrane;BPMOF	O.I.	C.G.	H.G.
371.9	100.0	36.0	At1g54470	841889	RPP27 (resistance to Peronospora parasitica 27)	Encodes a Cf-like gene in Arabidopsis that confers downy mildew resistance to several isolates of Peronospora parasitica.	O.I.	C.G.	H.G.
371.7	100.0	38.5	At4g21950	828284	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
371.3	100.0	32.6	At3g16160	820861	transcription factor	F:transcription factor activity;P:unknown;C:cellular_component unknown;OMP	O.I.	C.G.	H.G.
370.6	100.0	45.6	At1g51480	841573	disease resistance protein (CC-NBS-LRR class), putative	F:protein binding, ATP binding;P:defense response, apoptosis;C:cellular_component unknown;PMBOFA	O.I.	C.G.	H.G.
369.0	100.0	42.7	At1g72080	843539	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOFPBVA	O.I.	C.G.	H.G.
368.6	100.0	47.8	At4g33990	829546	EMB2758 (embryo defective 2758)	F:unknown;P:embryonic development ending in seed dormancy;C:mitochondrion;POMFB	O.I.	C.G.	H.G.
368.1	100.0	42.8	At3g44240	823549	CCR4-NOT transcription complex protein, putative	F:ribonuclease activity, nucleic acid binding;P:RNA modification;C:nucleus;MPOF	O.I.	C.G.	H.G.
367.8	100.0	33.5	At1g65740	842885	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
367.5	100.0	57.2	At2g22350	816767	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
367.2	100.0	103.7	At1g12720	3766711	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
366.9	100.0	30.5	At4g08560	826417	APUM15 (Arabidopsis Pumilio 15)	F:RNA binding, binding;P:unknown;C:endomembrane system;FMOP	O.I.	C.G.	H.G.
364.3	100.0	19.5	At2g25230	817061	MYB100 (myb domain protein 100)	Encodes a putative transcription factor (MYB100).	O.I.	C.G.	H.G.
363.6	100.0	48.4	At1g23450	838953	-	pentatricopeptide (PPR) repeat-containing protein	O.I.	C.G.	H.G.
363.1	100.0	119.0	At2g07713	815387	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
361.9	100.0	33.2	At1g62410	842539	MIF4G domain-containing protein	F:translation initiation factor activity;P:translation, RNA metabolic process;C:endomembrane system;MOFP	O.I.	C.G.	H.G.
361.4	100.0	23.1	At2g31910	817749	ATCHX21 (CATION/H+ EXCHANGER 21)	member of Putative Na+/H+ antiporter family	O.I.	C.G.	H.G.
361.3	100.0	30.1	At4g07515	826202	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
361.1	100.0	58.6	At2g16870	816188	disease resistance protein (TIR-NBS-LRR class), putative	F:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFA	O.I.	C.G.	H.G.
361.0	100.0	29.8	At5g49290	834989	protein binding	F:protein binding;P:signal transduction;C:unknown;PMBOFVA	O.I.	C.G.	H.G.

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GSM ID	GSM143308
Assay name	Tsu_genomic_hyb_3
GSE experiment	GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

Microarray experiments to specifically-expressed genes

GSM ID GSM143308 Assay name Tsu_genomic_hyb_3 GSE experiment GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

GSM ID GSM143308

Assay name Tsu_genomic_hyb_3

GSE experiment GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1