CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM143306

Assay name High_Na_seg_pool_tsu_col_F2

GSE experiment GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
597.2 100.0 59.8 At5g46295 834672 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
562.6 100.0 29.4 At2g37000 818274 TCP family transcription factor, putative F:transcription factor activity;P:regulation of transcription;C:chloroplast;P O.I. C.G. H.G.
547.5 100.0 105.8 At1g65210 842828 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB O.I. C.G. H.G.
525.7 100.0 78.7 At4g14670 827117 CLPB2 This locus was originally annotated as encoding ClpB2 (also referred to as Hsp92.7), which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. However, according to Lee et al. (2007, Plant Journal, 49:115-127), there is no evidence for expression of an appropriate-sized mRNA from this locus. Re-annotation of the genome indicates that this locus potentially encodes a 68.8-kDa protein, containing only the N-terminal two thirds of the originally predicted open reading frame. This locus contains a 626-bp deletion in WS ecotype compared with the Col ecotype, which eliminates residues 1-86 of the predicted protein. O.I. C.G. H.G.
520.9 100.0 41.5 At3g45250 3769646 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
520.8 100.0 38.1 At3g16020 820847 phospholipase C F:phospholipase C activity;P:intracellular signaling cascade, lipid metabolic process;C:cellular_component unknown;P O.I. C.G. H.G.
502.3 100.0 81.7 At3g13240 820523 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown O.I. C.G. H.G.
498.7 100.0 84.4 At3g26240 822226 DC1 domain-containing protein F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMBOF O.I. C.G. H.G.
495.7 100.0 61.5 At1g21530 838754 AMP-binding protein, putative F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
491.5 100.0 47.7 At5g02330 831755 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO O.I. C.G. H.G.
477.9 100.0 45.4 At4g29710 829092 phosphodiesterase/nucleotide pyrophosphatase-related F:catalytic activity;P:metabolic process;C:cellular_component unknown;MBFPOV O.I. C.G. H.G.
450.0 100.0 135.8 At2g07749 815342 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;VPF O.I. C.G. H.G.
448.0 100.0 195.4 At2g07728 815401 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
444.3 100.0 22.5 At1g62160 3767608 serine-type endopeptidase inhibitor F:serine-type endopeptidase inhibitor activity;P:unknown;C:unknown O.I. C.G. H.G.
443.9 100.0 73.6 At2g33080 817870 AtRLP28 (Receptor Like Protein 28) F:protein binding;P:signal transduction;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
439.6 100.0 42.8 At5g04650 830342 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
425.7 100.0 33.0 At2g12880 815767 zinc knuckle (CCHC-type) family protein F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MFOPV O.I. C.G. H.G.
424.1 100.0 184.9 At2g07685 3768050 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
421.5 100.0 164.2 At2g07697 3768071 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
418.1 100.0 57.7 At1g32950 840189 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOAFM O.I. C.G. H.G.
417.5 100.0 45.9 At1g27285 3766803 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
416.0 100.0 25.3 At2g11130 3768370 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
412.4 100.0 252.2 At2g07736 3768150 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
408.0 100.0 31.6 At1g33900 840287 avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative F:GTP binding;P:response to bacterium;C:unknown;MPOBFV O.I. C.G. H.G.
406.5 100.0 55.3 At3g15370 820776 ATEXPA12 (ARABIDOPSIS THALIANA EXPANSIN 12) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) O.I. C.G. H.G.
405.2 100.0 124.2 At2g07776 815417 - - O.I. C.G. H.G.
404.3 100.0 51.2 At5g41890 834194 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:cellular_component unknown;PBOFM O.I. C.G. H.G.
401.1 100.0 183.5 At2g07705 815380 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
396.3 100.0 166.6 At2g07712 3768482 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
392.7 100.0 49.6 At2g06950 3768536 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
391.6 100.0 92.6 At3g22000 821760 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
389.1 100.0 42.4 At3g21590 821713 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
387.0 100.0 36.1 At5g17080 831571 cathepsin-related F:cysteine-type peptidase activity;P:unknown;C:cellular_component unknown;MOPV O.I. C.G. H.G.
386.8 100.0 24.9 At1g52390 841669 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
386.4 100.0 37.0 At2g11220 3768340 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
383.7 100.0 60.6 At1g64210 842726 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:mitochondrion;PMOBFVA O.I. C.G. H.G.
382.8 100.0 18.9 At1g34590 840363 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
382.0 100.0 157.0 At2g07691 815367 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
381.1 100.0 88.4 At3g15200 820751 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:cytosolic ribosome;POFMA O.I. C.G. H.G.
378.8 100.0 49.3 At2g11140 3768371 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
376.7 100.0 220.6 At2g07714 815388 transcription factor-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
376.3 100.0 29.2 At1g41930 3767211 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
375.4 100.0 51.2 At5g37640 833742 UBQ9 polyubiquitin gene with 4 ubiquitin repeats. The first ubiquitin repeat has 16 amino acid replacements. O.I. C.G. H.G.
375.0 100.0 53.0 At1g50280 841450 phototropic-responsive NPH3 family protein F:protein binding, signal transducer activity;P:response to light stimulus;C:cellular_component unknown;P O.I. C.G. H.G.
372.3 100.0 168.2 At2g07676 815350 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
369.4 100.0 62.2 At3g43100 823369 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
368.7 100.0 17.1 At5g40560 834054 DegP13 (DegP protease 13) Encodes a putative DegP protease. O.I. C.G. H.G.
368.2 100.0 75.4 At2g32310 817792 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF O.I. C.G. H.G.
367.6 100.0 40.9 At4g20220 827769 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
367.4 100.0 58.7 At1g32650 840159 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown O.I. C.G. H.G.
367.2 100.0 92.4 At3g45840 823727 protein binding / zinc ion binding F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
367.1 100.0 59.8 At2g20620 816588 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
366.7 100.0 41.4 At5g43640 834384 40S ribosomal protein S15 (RPS15E) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;BOPMAF O.I. C.G. H.G.
366.5 100.0 45.5 At4g16090 827294 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
364.6 100.0 129.2 At2g07738 815411 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
364.5 100.0 92.4 At2g07706 815381 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
364.3 100.0 40.9 At1g50800 841502 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOMFV O.I. C.G. H.G.
364.0 100.0 34.3 At1g68270 843156 AMP-dependent synthetase and ligase family protein F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
363.6 100.0 33.9 At3g56390 824806 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
363.3 100.0 69.9 At5g08490 830748 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF O.I. C.G. H.G.
357.6 100.0 79.8 At4g14970 827156 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MPOB O.I. C.G. H.G.
357.3 100.0 35.3 At1g54470 841889 RPP27 (resistance to Peronospora parasitica 27) Encodes a Cf-like gene in Arabidopsis that confers downy mildew resistance to several isolates of Peronospora parasitica. O.I. C.G. H.G.
357.3 100.0 31.2 At2g44195 819027 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
355.7 100.0 48.0 At2g15450 816037 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
354.5 100.0 29.4 At3g06630 819842 protein kinase family protein F:two-component sensor activity, protein serine/threonine kinase activity, protein kinase activity, signal transducer activity, ATP binding;P:signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay);C:unknown;MPOBFVA O.I. C.G. H.G.
354.3 100.0 47.4 At3g57110 824878 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
353.7 100.0 117.4 At2g07713 815387 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
353.1 100.0 51.9 At1g59630 842253 F-box family protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
351.5 100.0 35.2 At3g52270 824392 ATP binding / RNA polymerase II transcription factor F:RNA polymerase II transcription factor activity, ATP binding;P:transcription initiation from RNA polymerase II promoter;C:transcription factor TFIIF complex;MFPO O.I. C.G. H.G.
351.1 100.0 11.0 At1g64020 842705 serpin-related / serine protease inhibitor-related F:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
350.5 100.0 123.6 At2g07686 3768051 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
349.2 100.0 54.9 At2g26790 817220 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:mitochondrion;POMFBAV O.I. C.G. H.G.
349.2 100.0 21.6 At3g29150 822563 - pseudogene of F-box family protein O.I. C.G. H.G.
349.1 100.0 51.3 At5g07400 830631 forkhead-associated domain-containing protein / FHA domain-containing protein F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, phosphoric diester hydrolase activity, zinc ion binding, nucleic acid binding;P:DNA repair;C:nucleus;MFOPB O.I. C.G. H.G.
349.1 100.0 46.8 At2g32050 817765 cell cycle control protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP O.I. C.G. H.G.
348.5 100.0 44.7 At5g26620 832728 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
347.1 100.0 46.4 At5g19710 832091 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
346.8 100.0 50.7 At2g40910 818688 F-box protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
346.7 100.0 36.3 At2g13900 815874 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO O.I. C.G. H.G.
345.8 100.0 29.6 At2g20510 816572 ATTIM44-1 One of two loci encoding the TIM44 subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is the part of the complex that hydrolyzes ATP to provide energy for protein translocation to the inner membrane. O.I. C.G. H.G.
345.7 100.0 44.1 At5g46000 834640 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
343.1 100.0 70.5 At2g24000 816934 scpl22 (serine carboxypeptidase-like 22) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
342.3 100.0 46.7 At1g25270 839110 - F:unknown;P:unknown;C:endomembrane system, membrane;PBOFAM O.I. C.G. H.G.
339.5 100.0 73.1 At5g28170 832893 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
338.6 100.0 44.2 At1g09410 837463 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:unknown;POMFB O.I. C.G. H.G.
338.2 100.0 188.5 At2g07768 3767772 heme transporter F:heme transporter activity;P:cytochrome complex assembly, heme transport;C:mitochondrion, membrane O.I. C.G. H.G.
336.8 100.0 40.3 At5g48550 834911 F-box family protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
336.6 100.0 39.1 At5g27810 832843 sequence-specific DNA binding / transcription factor F:transcription factor activity, sequence-specific DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;P O.I. C.G. H.G.
334.7 100.0 202.7 At2g07672 815344 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
334.3 100.0 33.2 At2g16190 816116 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFO O.I. C.G. H.G.
334.0 100.0 45.4 At1g21312 - - O.I. C.G. H.G.
332.4 100.0 68.4 At2g15070 3767890 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
331.3 100.0 108.2 At1g34660 3766921 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
331.3 100.0 79.1 At1g05670 837074 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMOFBVA O.I. C.G. H.G.
331.1 100.0 39.8 At4g15755 827254 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMO O.I. C.G. H.G.
330.6 100.0 91.0 At4g09080 826486 TOC75-IV Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Knockout mutants have abnormal etioplasts. O.I. C.G. H.G.
330.1 100.0 37.4 At5g51900 835265 cytochrome P450 family F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:unknown;PFBMOA O.I. C.G. H.G.
330.0 100.0 32.8 At4g16030 827287 structural constituent of ribosome F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MOFP O.I. C.G. H.G.
329.9 100.0 47.4 At1g61130 842406 SCPL32 (SERINE CARBOXYPEPTIDASE-LIKE 32) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
329.9 100.0 28.0 At5g45570 834593 Ulp1 protease family protein F:peptidase activity, cysteine-type peptidase activity;P:proteolysis;C:cellular_component unknown;POMBFA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
597.2	100.0	59.8	At5g46295	834672	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
562.6	100.0	29.4	At2g37000	818274	TCP family transcription factor, putative	F:transcription factor activity;P:regulation of transcription;C:chloroplast;P	O.I.	C.G.	H.G.
547.5	100.0	105.8	At1g65210	842828	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB	O.I.	C.G.	H.G.
525.7	100.0	78.7	At4g14670	827117	CLPB2	This locus was originally annotated as encoding ClpB2 (also referred to as Hsp92.7), which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. However, according to Lee et al. (2007, Plant Journal, 49:115-127), there is no evidence for expression of an appropriate-sized mRNA from this locus. Re-annotation of the genome indicates that this locus potentially encodes a 68.8-kDa protein, containing only the N-terminal two thirds of the originally predicted open reading frame. This locus contains a 626-bp deletion in WS ecotype compared with the Col ecotype, which eliminates residues 1-86 of the predicted protein.	O.I.	C.G.	H.G.
520.9	100.0	41.5	At3g45250	3769646	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
520.8	100.0	38.1	At3g16020	820847	phospholipase C	F:phospholipase C activity;P:intracellular signaling cascade, lipid metabolic process;C:cellular_component unknown;P	O.I.	C.G.	H.G.
502.3	100.0	81.7	At3g13240	820523	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	O.I.	C.G.	H.G.
498.7	100.0	84.4	At3g26240	822226	DC1 domain-containing protein	F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMBOF	O.I.	C.G.	H.G.
495.7	100.0	61.5	At1g21530	838754	AMP-binding protein, putative	F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
491.5	100.0	47.7	At5g02330	831755	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO	O.I.	C.G.	H.G.
477.9	100.0	45.4	At4g29710	829092	phosphodiesterase/nucleotide pyrophosphatase-related	F:catalytic activity;P:metabolic process;C:cellular_component unknown;MBFPOV	O.I.	C.G.	H.G.
450.0	100.0	135.8	At2g07749	815342	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;VPF	O.I.	C.G.	H.G.
448.0	100.0	195.4	At2g07728	815401	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
444.3	100.0	22.5	At1g62160	3767608	serine-type endopeptidase inhibitor	F:serine-type endopeptidase inhibitor activity;P:unknown;C:unknown	O.I.	C.G.	H.G.
443.9	100.0	73.6	At2g33080	817870	AtRLP28 (Receptor Like Protein 28)	F:protein binding;P:signal transduction;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
439.6	100.0	42.8	At5g04650	830342	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
425.7	100.0	33.0	At2g12880	815767	zinc knuckle (CCHC-type) family protein	F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MFOPV	O.I.	C.G.	H.G.
424.1	100.0	184.9	At2g07685	3768050	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
421.5	100.0	164.2	At2g07697	3768071	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
418.1	100.0	57.7	At1g32950	840189	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOAFM	O.I.	C.G.	H.G.
417.5	100.0	45.9	At1g27285	3766803	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
416.0	100.0	25.3	At2g11130	3768370	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
412.4	100.0	252.2	At2g07736	3768150	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
408.0	100.0	31.6	At1g33900	840287	avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putative	F:GTP binding;P:response to bacterium;C:unknown;MPOBFV	O.I.	C.G.	H.G.
406.5	100.0	55.3	At3g15370	820776	ATEXPA12 (ARABIDOPSIS THALIANA EXPANSIN 12)	member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)	O.I.	C.G.	H.G.
405.2	100.0	124.2	At2g07776	815417	-	-	O.I.	C.G.	H.G.
404.3	100.0	51.2	At5g41890	834194	GDSL-motif lipase/hydrolase family protein	F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:cellular_component unknown;PBOFM	O.I.	C.G.	H.G.
401.1	100.0	183.5	At2g07705	815380	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
396.3	100.0	166.6	At2g07712	3768482	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
392.7	100.0	49.6	At2g06950	3768536	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
391.6	100.0	92.6	At3g22000	821760	receptor-like protein kinase-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
389.1	100.0	42.4	At3g21590	821713	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
387.0	100.0	36.1	At5g17080	831571	cathepsin-related	F:cysteine-type peptidase activity;P:unknown;C:cellular_component unknown;MOPV	O.I.	C.G.	H.G.
386.8	100.0	24.9	At1g52390	841669	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
386.4	100.0	37.0	At2g11220	3768340	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
383.7	100.0	60.6	At1g64210	842726	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:mitochondrion;PMOBFVA	O.I.	C.G.	H.G.
382.8	100.0	18.9	At1g34590	840363	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
382.0	100.0	157.0	At2g07691	815367	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
381.1	100.0	88.4	At3g15200	820751	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:biological_process unknown;C:cytosolic ribosome;POFMA	O.I.	C.G.	H.G.
378.8	100.0	49.3	At2g11140	3768371	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
376.7	100.0	220.6	At2g07714	815388	transcription factor-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
376.3	100.0	29.2	At1g41930	3767211	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
375.4	100.0	51.2	At5g37640	833742	UBQ9	polyubiquitin gene with 4 ubiquitin repeats. The first ubiquitin repeat has 16 amino acid replacements.	O.I.	C.G.	H.G.
375.0	100.0	53.0	At1g50280	841450	phototropic-responsive NPH3 family protein	F:protein binding, signal transducer activity;P:response to light stimulus;C:cellular_component unknown;P	O.I.	C.G.	H.G.
372.3	100.0	168.2	At2g07676	815350	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
369.4	100.0	62.2	At3g43100	823369	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
368.7	100.0	17.1	At5g40560	834054	DegP13 (DegP protease 13)	Encodes a putative DegP protease.	O.I.	C.G.	H.G.
368.2	100.0	75.4	At2g32310	817792	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF	O.I.	C.G.	H.G.
367.6	100.0	40.9	At4g20220	827769	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
367.4	100.0	58.7	At1g32650	840159	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	O.I.	C.G.	H.G.
367.2	100.0	92.4	At3g45840	823727	protein binding / zinc ion binding	F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
367.1	100.0	59.8	At2g20620	816588	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
366.7	100.0	41.4	At5g43640	834384	40S ribosomal protein S15 (RPS15E)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;BOPMAF	O.I.	C.G.	H.G.
366.5	100.0	45.5	At4g16090	827294	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
364.6	100.0	129.2	At2g07738	815411	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
364.5	100.0	92.4	At2g07706	815381	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
364.3	100.0	40.9	At1g50800	841502	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOMFV	O.I.	C.G.	H.G.
364.0	100.0	34.3	At1g68270	843156	AMP-dependent synthetase and ligase family protein	F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
363.6	100.0	33.9	At3g56390	824806	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
363.3	100.0	69.9	At5g08490	830748	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF	O.I.	C.G.	H.G.
357.6	100.0	79.8	At4g14970	827156	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MPOB	O.I.	C.G.	H.G.
357.3	100.0	35.3	At1g54470	841889	RPP27 (resistance to Peronospora parasitica 27)	Encodes a Cf-like gene in Arabidopsis that confers downy mildew resistance to several isolates of Peronospora parasitica.	O.I.	C.G.	H.G.
357.3	100.0	31.2	At2g44195	819027	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
355.7	100.0	48.0	At2g15450	816037	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
354.5	100.0	29.4	At3g06630	819842	protein kinase family protein	F:two-component sensor activity, protein serine/threonine kinase activity, protein kinase activity, signal transducer activity, ATP binding;P:signal transduction, protein amino acid phosphorylation, regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay);C:unknown;MPOBFVA	O.I.	C.G.	H.G.
354.3	100.0	47.4	At3g57110	824878	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
353.7	100.0	117.4	At2g07713	815387	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
353.1	100.0	51.9	At1g59630	842253	F-box family protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
351.5	100.0	35.2	At3g52270	824392	ATP binding / RNA polymerase II transcription factor	F:RNA polymerase II transcription factor activity, ATP binding;P:transcription initiation from RNA polymerase II promoter;C:transcription factor TFIIF complex;MFPO	O.I.	C.G.	H.G.
351.1	100.0	11.0	At1g64020	842705	serpin-related / serine protease inhibitor-related	F:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
350.5	100.0	123.6	At2g07686	3768051	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
349.2	100.0	54.9	At2g26790	817220	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:biological_process unknown;C:mitochondrion;POMFBAV	O.I.	C.G.	H.G.
349.2	100.0	21.6	At3g29150	822563	-	pseudogene of F-box family protein	O.I.	C.G.	H.G.
349.1	100.0	51.3	At5g07400	830631	forkhead-associated domain-containing protein / FHA domain-containing protein	F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, phosphoric diester hydrolase activity, zinc ion binding, nucleic acid binding;P:DNA repair;C:nucleus;MFOPB	O.I.	C.G.	H.G.
349.1	100.0	46.8	At2g32050	817765	cell cycle control protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
348.5	100.0	44.7	At5g26620	832728	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
347.1	100.0	46.4	At5g19710	832091	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
346.8	100.0	50.7	At2g40910	818688	F-box protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
346.7	100.0	36.3	At2g13900	815874	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO	O.I.	C.G.	H.G.
345.8	100.0	29.6	At2g20510	816572	ATTIM44-1	One of two loci encoding the TIM44 subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is the part of the complex that hydrolyzes ATP to provide energy for protein translocation to the inner membrane.	O.I.	C.G.	H.G.
345.7	100.0	44.1	At5g46000	834640	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
343.1	100.0	70.5	At2g24000	816934	scpl22 (serine carboxypeptidase-like 22)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
342.3	100.0	46.7	At1g25270	839110	-	F:unknown;P:unknown;C:endomembrane system, membrane;PBOFAM	O.I.	C.G.	H.G.
339.5	100.0	73.1	At5g28170	832893	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
338.6	100.0	44.2	At1g09410	837463	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:biological_process unknown;C:unknown;POMFB	O.I.	C.G.	H.G.
338.2	100.0	188.5	At2g07768	3767772	heme transporter	F:heme transporter activity;P:cytochrome complex assembly, heme transport;C:mitochondrion, membrane	O.I.	C.G.	H.G.
336.8	100.0	40.3	At5g48550	834911	F-box family protein-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
336.6	100.0	39.1	At5g27810	832843	sequence-specific DNA binding / transcription factor	F:transcription factor activity, sequence-specific DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;P	O.I.	C.G.	H.G.
334.7	100.0	202.7	At2g07672	815344	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
334.3	100.0	33.2	At2g16190	816116	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFO	O.I.	C.G.	H.G.
334.0	100.0	45.4	At1g21312		-	-	O.I.	C.G.	H.G.
332.4	100.0	68.4	At2g15070	3767890	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
331.3	100.0	108.2	At1g34660	3766921	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
331.3	100.0	79.1	At1g05670	837074	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMOFBVA	O.I.	C.G.	H.G.
331.1	100.0	39.8	At4g15755	827254	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMO	O.I.	C.G.	H.G.
330.6	100.0	91.0	At4g09080	826486	TOC75-IV	Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Knockout mutants have abnormal etioplasts.	O.I.	C.G.	H.G.
330.1	100.0	37.4	At5g51900	835265	cytochrome P450 family	F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:unknown;PFBMOA	O.I.	C.G.	H.G.
330.0	100.0	32.8	At4g16030	827287	structural constituent of ribosome	F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MOFP	O.I.	C.G.	H.G.
329.9	100.0	47.4	At1g61130	842406	SCPL32 (SERINE CARBOXYPEPTIDASE-LIKE 32)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
329.9	100.0	28.0	At5g45570	834593	Ulp1 protease family protein	F:peptidase activity, cysteine-type peptidase activity;P:proteolysis;C:cellular_component unknown;POMBFA	O.I.	C.G.	H.G.

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GSM ID	GSM143306
Assay name	High_Na_seg_pool_tsu_col_F2
GSE experiment	GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

Microarray experiments to specifically-expressed genes

GSM ID GSM143306 Assay name High_Na_seg_pool_tsu_col_F2 GSE experiment GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

GSM ID GSM143306

Assay name High_Na_seg_pool_tsu_col_F2

GSE experiment GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1