CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM143302

Assay name Ts_genomic_hyb_1

GSE experiment GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1445.4 100.0 146.4 At1g60130 842308 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
1083.6 100.0 72.5 At2g45380 819145 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
1010.0 100.0 31.8 At2g06630 815222 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
965.1 100.0 105.6 At2g05000 815047 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
791.1 100.0 60.8 At2g19960 816515 hAT dimerisation domain-containing protein / transposase-related F:protein dimerization activity;P:biological_process unknown;C:cellular_component unknown;MPO O.I. C.G. H.G.
786.3 100.0 83.7 At2g06660 3767910 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
766.7 100.0 25.8 At2g06640 3767766 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
689.9 100.0 42.9 At2g33030 817865 AtRLP25 (Receptor Like Protein 25) F:protein binding;P:signal transduction;C:cellular_component unknown;POMBFA O.I. C.G. H.G.
663.5 100.0 25.7 At2g17490 3768408 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
646.4 100.0 23.7 At1g17390 838311 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
633.2 100.0 80.0 At5g35600 833525 HDA7 (histone deacetylase7) F:histone deacetylase activity;P:histone deacetylation;C:nucleus;OBMFPA O.I. C.G. H.G.
629.4 100.0 62.9 At2g05010 3768267 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
627.9 100.0 77.3 At5g55680 835662 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMPFVA O.I. C.G. H.G.
622.3 100.0 49.7 At1g12770 837833 EMB1586 (embryo defective 1586) F:helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity;P:embryonic development ending in seed dormancy;C:unknown;BOMFPAV O.I. C.G. H.G.
601.5 100.0 67.8 At2g13890 3768362 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
586.3 100.0 8.2 At2g16820 816183 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
580.2 100.0 124.3 At1g30140 839894 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
569.3 100.0 42.8 At5g18880 832006 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
557.4 100.0 75.9 At5g46500 834693 - F:molecular_function unknown;P:biological_process unknown;C:unknown;POMB O.I. C.G. H.G.
554.5 100.0 82.3 At3g32080 822963 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
554.2 100.0 89.4 At4g10520 826644 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM O.I. C.G. H.G.
552.0 100.0 72.9 At1g08020 - - O.I. C.G. H.G.
545.5 100.0 111.4 At2g14800 815968 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPM O.I. C.G. H.G.
542.5 100.0 36.1 At1g13630 837924 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBA O.I. C.G. H.G.
538.5 100.0 73.2 At3g44440 823569 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
535.2 100.0 80.0 At3g27450 3768952 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
530.6 100.0 20.4 At5g06040 830491 self-incompatibility protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
530.0 100.0 42.6 At3g43040 3769523 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
522.8 100.0 49.2 At2g02280 814759 AtPP2-B4 (Phloem protein 2-B4) F:carbohydrate binding;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
520.5 100.0 33.0 At1g07680 837281 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
519.4 100.0 34.8 At2g01800 814711 COP1-interacting protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVA O.I. C.G. H.G.
518.2 100.0 119.5 At1g54300 841871 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
510.9 100.0 22.1 At1g46696 841116 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
506.9 100.0 64.4 At2g28170 817363 ATCHX7 member of Putative Na+/H+ antiporter family O.I. C.G. H.G.
506.8 100.0 99.0 At1g20280 838616 homeobox-leucine zipper protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
502.4 100.0 67.3 At5g01150 831767 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
501.0 100.0 36.9 At1g35740 3766959 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
497.9 100.0 38.6 At3g11080 820279 AtRLP35 (Receptor Like Protein 35) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMBOFAV O.I. C.G. H.G.
496.3 100.0 68.2 At1g35050 3766928 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
489.1 100.0 45.8 At1g02540 839516 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFVBPA O.I. C.G. H.G.
487.0 100.0 85.4 At2g34800 818045 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
482.2 100.0 172.3 At1g34904 3766926 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
481.8 100.0 31.7 At5g58780 835992 dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative F:dehydrodolichyl diphosphate synthase activity;P:dolichol biosynthetic process;C:endomembrane system;OBAFMP O.I. C.G. H.G.
479.4 100.0 151.5 At1g39190 3767119 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
476.5 100.0 41.1 At2g24620 816998 S-locus glycoprotein family protein F:unknown;P:recognition of pollen;C:cellular_component unknown;P O.I. C.G. H.G.
475.6 100.0 32.2 At3g48370 3769684 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
467.3 100.0 104.7 At2g07706 815381 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
465.2 100.0 103.6 At1g51750 3767436 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
460.4 100.0 42.0 At1g02320 839425 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown O.I. C.G. H.G.
460.0 100.0 44.6 At3g43770 823488 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
457.2 100.0 47.0 At2g17960 816306 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
454.8 100.0 51.2 At2g24410 816977 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
449.6 100.0 78.2 At2g05640 3768197 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
448.6 100.0 32.5 At1g34240 3766913 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
443.7 100.0 34.2 At1g24390 839056 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
440.5 100.0 70.0 At1g62440 842542 LRX2 (LEUCINE-RICH REPEAT/EXTENSIN 2) encodes a paralog of LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1) which acts synergistically with LRX1 in root hair cell morphogenesis. O.I. C.G. H.G.
436.8 100.0 122.5 At2g18530 816368 protein kinase family protein F:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MOPFBVA O.I. C.G. H.G.
436.0 100.0 40.6 At2g28010 817345 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFO O.I. C.G. H.G.
432.9 100.0 71.2 At3g43650 3769589 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
432.2 100.0 90.9 At4g07370 3770410 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
429.9 100.0 45.7 At4g00280 827209 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
425.7 100.0 53.1 At4g03380 827946 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
423.8 100.0 71.9 At2g33080 817870 AtRLP28 (Receptor Like Protein 28) F:protein binding;P:signal transduction;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
422.0 100.0 57.0 At4g31960 829326 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
421.7 100.0 40.1 At2g13900 815874 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO O.I. C.G. H.G.
420.3 100.0 59.2 At1g50680 841490 AP2 domain-containing transcription factor, putative F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POV O.I. C.G. H.G.
420.2 100.0 38.0 At5g41820 834187 geranylgeranyl transferase alpha subunit-related / RAB geranylgeranyltransferase alpha subunit-related F:protein binding, protein prenyltransferase activity;P:protein amino acid prenylation;C:unknown;MOPFBA O.I. C.G. H.G.
419.6 100.0 44.9 At5g18160 831934 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
419.0 100.0 59.0 At1g66380 842956 MYB114 (myb domain protein 114) Encodes a member of the MYB family of transcription factors. Involved in regulation of anthocyanin biosynthesis. Affects the expression of enzymes involved in later steps of anthocyanin biosynthesis O.I. C.G. H.G.
417.2 100.0 63.5 At3g01580 821107 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFM O.I. C.G. H.G.
416.6 100.0 51.1 At2g32050 817765 cell cycle control protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP O.I. C.G. H.G.
416.5 100.0 63.1 At1g64100 842714 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:unknown;C:unknown;POMFBA O.I. C.G. H.G.
416.1 100.0 33.6 At2g44195 819027 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
413.6 100.0 84.3 At4g25510 828655 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
413.0 100.0 48.0 At4g03040 828107 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
411.0 100.0 300.0 At2g07737 3768151 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
407.4 100.0 63.6 At4g08530 826412 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. O.I. C.G. H.G.
407.2 100.0 60.1 At2g01500 814678 PFS2 (PRETTY FEW SEEDS 2) PFS2 encodes a homeodomain gene that is a member of the WUS clade of transcription factors. It delays differentiation and maturation of primordia and regulates ovule patterning. The pfs2 mutant exhibits developmental defects in the maternal integuments and gametophyte, specifically, the boundary between the chalaza and the nucellus shifted towards the distal end of pfs2 ovule primordia. In addition, leaves displayed curling and petals were wavy and crenulated. Overexpression of PFS2 affects floral organ and leaf development. Single- and double-mutant analyses reveal that PFS2 activity represses AGAMOUS expression in young floral primordia. Also involved in regulation of response to low temperature. O.I. C.G. H.G.
403.9 100.0 33.1 At5g27580 832818 AGL89 F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;P O.I. C.G. H.G.
403.3 100.0 89.6 At5g12990 831139 CLE40 (CLAVATA3/ESR-RELATED 40) Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. O.I. C.G. H.G.
402.9 100.0 43.3 At5g43640 834384 40S ribosomal protein S15 (RPS15E) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;BOPMAF O.I. C.G. H.G.
402.8 100.0 73.6 At5g08490 830748 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF O.I. C.G. H.G.
401.5 100.0 52.2 At5g37970 833776 S-adenosyl-L-methionine:carboxyl methyltransferase family protein F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:unknown;POBMF O.I. C.G. H.G.
400.5 100.0 116.7 At3g42900 3769508 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
400.5 100.0 65.9 At3g29775 3769046 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
398.8 100.0 108.4 At2g04310 3768003 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
398.0 100.0 79.1 At5g28170 832893 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
397.3 100.0 55.0 At1g53950 841834 ubiquitin family protein F:molecular_function unknown;P:protein modification process;C:cellular_component unknown;MOPFVB O.I. C.G. H.G.
396.1 100.0 49.7 At3g50150 824177 unknown protein F:unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
393.8 100.0 30.5 At5g37090 833680 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
393.7 100.0 48.5 At3g19070 821441 cell wall protein-related F:transcription factor activity;P:regulation of transcription;C:unknown;OMFPBVA O.I. C.G. H.G.
393.1 100.0 46.2 At4g02310 828070 kelch repeat-containing F-box family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PM O.I. C.G. H.G.
391.8 100.0 36.9 At4g36170 829774 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
391.6 100.0 34.8 At4g11745 826780 kelch repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBA O.I. C.G. H.G.
390.3 100.0 41.5 At2g14810 815969 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
390.1 100.0 37.1 At1g74190 843759 AtRLP15 (Receptor Like Protein 15) F:protein binding;P:signal transduction;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
387.5 100.0 30.6 At2g39520 818537 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
385.7 100.0 48.5 At1g71470 843488 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
385.6 100.0 37.1 At1g32480 840142 oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor F:oxidoreductase activity, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;P:metabolic process;C:unknown;BOMFAP O.I. C.G. H.G.
385.3 100.0 45.0 At5g44470 834474 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
1445.4	100.0	146.4	At1g60130	842308	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
1083.6	100.0	72.5	At2g45380	819145	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
1010.0	100.0	31.8	At2g06630	815222	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
965.1	100.0	105.6	At2g05000	815047	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
791.1	100.0	60.8	At2g19960	816515	hAT dimerisation domain-containing protein / transposase-related	F:protein dimerization activity;P:biological_process unknown;C:cellular_component unknown;MPO	O.I.	C.G.	H.G.
786.3	100.0	83.7	At2g06660	3767910	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
766.7	100.0	25.8	At2g06640	3767766	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
689.9	100.0	42.9	At2g33030	817865	AtRLP25 (Receptor Like Protein 25)	F:protein binding;P:signal transduction;C:cellular_component unknown;POMBFA	O.I.	C.G.	H.G.
663.5	100.0	25.7	At2g17490	3768408	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
646.4	100.0	23.7	At1g17390	838311	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
633.2	100.0	80.0	At5g35600	833525	HDA7 (histone deacetylase7)	F:histone deacetylase activity;P:histone deacetylation;C:nucleus;OBMFPA	O.I.	C.G.	H.G.
629.4	100.0	62.9	At2g05010	3768267	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
627.9	100.0	77.3	At5g55680	835662	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMPFVA	O.I.	C.G.	H.G.
622.3	100.0	49.7	At1g12770	837833	EMB1586 (embryo defective 1586)	F:helicase activity, ATP binding, nucleic acid binding, ATP-dependent helicase activity;P:embryonic development ending in seed dormancy;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
601.5	100.0	67.8	At2g13890	3768362	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
586.3	100.0	8.2	At2g16820	816183	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
580.2	100.0	124.3	At1g30140	839894	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
569.3	100.0	42.8	At5g18880	832006	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
557.4	100.0	75.9	At5g46500	834693	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;POMB	O.I.	C.G.	H.G.
554.5	100.0	82.3	At3g32080	822963	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
554.2	100.0	89.4	At4g10520	826644	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM	O.I.	C.G.	H.G.
552.0	100.0	72.9	At1g08020		-	-	O.I.	C.G.	H.G.
545.5	100.0	111.4	At2g14800	815968	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPM	O.I.	C.G.	H.G.
542.5	100.0	36.1	At1g13630	837924	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBA	O.I.	C.G.	H.G.
538.5	100.0	73.2	At3g44440	823569	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
535.2	100.0	80.0	At3g27450	3768952	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
530.6	100.0	20.4	At5g06040	830491	self-incompatibility protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
530.0	100.0	42.6	At3g43040	3769523	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
522.8	100.0	49.2	At2g02280	814759	AtPP2-B4 (Phloem protein 2-B4)	F:carbohydrate binding;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
520.5	100.0	33.0	At1g07680	837281	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
519.4	100.0	34.8	At2g01800	814711	COP1-interacting protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVA	O.I.	C.G.	H.G.
518.2	100.0	119.5	At1g54300	841871	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
510.9	100.0	22.1	At1g46696	841116	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
506.9	100.0	64.4	At2g28170	817363	ATCHX7	member of Putative Na+/H+ antiporter family	O.I.	C.G.	H.G.
506.8	100.0	99.0	At1g20280	838616	homeobox-leucine zipper protein-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
502.4	100.0	67.3	At5g01150	831767	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
501.0	100.0	36.9	At1g35740	3766959	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
497.9	100.0	38.6	At3g11080	820279	AtRLP35 (Receptor Like Protein 35)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMBOFAV	O.I.	C.G.	H.G.
496.3	100.0	68.2	At1g35050	3766928	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
489.1	100.0	45.8	At1g02540	839516	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFVBPA	O.I.	C.G.	H.G.
487.0	100.0	85.4	At2g34800	818045	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
482.2	100.0	172.3	At1g34904	3766926	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
481.8	100.0	31.7	At5g58780	835992	dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative	F:dehydrodolichyl diphosphate synthase activity;P:dolichol biosynthetic process;C:endomembrane system;OBAFMP	O.I.	C.G.	H.G.
479.4	100.0	151.5	At1g39190	3767119	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
476.5	100.0	41.1	At2g24620	816998	S-locus glycoprotein family protein	F:unknown;P:recognition of pollen;C:cellular_component unknown;P	O.I.	C.G.	H.G.
475.6	100.0	32.2	At3g48370	3769684	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
467.3	100.0	104.7	At2g07706	815381	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
465.2	100.0	103.6	At1g51750	3767436	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
460.4	100.0	42.0	At1g02320	839425	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	O.I.	C.G.	H.G.
460.0	100.0	44.6	At3g43770	823488	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
457.2	100.0	47.0	At2g17960	816306	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
454.8	100.0	51.2	At2g24410	816977	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
449.6	100.0	78.2	At2g05640	3768197	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
448.6	100.0	32.5	At1g34240	3766913	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
443.7	100.0	34.2	At1g24390	839056	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
440.5	100.0	70.0	At1g62440	842542	LRX2 (LEUCINE-RICH REPEAT/EXTENSIN 2)	encodes a paralog of LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1) which acts synergistically with LRX1 in root hair cell morphogenesis.	O.I.	C.G.	H.G.
436.8	100.0	122.5	At2g18530	816368	protein kinase family protein	F:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MOPFBVA	O.I.	C.G.	H.G.
436.0	100.0	40.6	At2g28010	817345	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFO	O.I.	C.G.	H.G.
432.9	100.0	71.2	At3g43650	3769589	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
432.2	100.0	90.9	At4g07370	3770410	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
429.9	100.0	45.7	At4g00280	827209	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
425.7	100.0	53.1	At4g03380	827946	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
423.8	100.0	71.9	At2g33080	817870	AtRLP28 (Receptor Like Protein 28)	F:protein binding;P:signal transduction;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
422.0	100.0	57.0	At4g31960	829326	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
421.7	100.0	40.1	At2g13900	815874	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO	O.I.	C.G.	H.G.
420.3	100.0	59.2	At1g50680	841490	AP2 domain-containing transcription factor, putative	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POV	O.I.	C.G.	H.G.
420.2	100.0	38.0	At5g41820	834187	geranylgeranyl transferase alpha subunit-related / RAB geranylgeranyltransferase alpha subunit-related	F:protein binding, protein prenyltransferase activity;P:protein amino acid prenylation;C:unknown;MOPFBA	O.I.	C.G.	H.G.
419.6	100.0	44.9	At5g18160	831934	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
419.0	100.0	59.0	At1g66380	842956	MYB114 (myb domain protein 114)	Encodes a member of the MYB family of transcription factors. Involved in regulation of anthocyanin biosynthesis. Affects the expression of enzymes involved in later steps of anthocyanin biosynthesis	O.I.	C.G.	H.G.
417.2	100.0	63.5	At3g01580	821107	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFM	O.I.	C.G.	H.G.
416.6	100.0	51.1	At2g32050	817765	cell cycle control protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
416.5	100.0	63.1	At1g64100	842714	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:unknown;C:unknown;POMFBA	O.I.	C.G.	H.G.
416.1	100.0	33.6	At2g44195	819027	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
413.6	100.0	84.3	At4g25510	828655	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
413.0	100.0	48.0	At4g03040	828107	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
411.0	100.0	300.0	At2g07737	3768151	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
407.4	100.0	63.6	At4g08530	826412	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.	O.I.	C.G.	H.G.
407.2	100.0	60.1	At2g01500	814678	PFS2 (PRETTY FEW SEEDS 2)	PFS2 encodes a homeodomain gene that is a member of the WUS clade of transcription factors. It delays differentiation and maturation of primordia and regulates ovule patterning. The pfs2 mutant exhibits developmental defects in the maternal integuments and gametophyte, specifically, the boundary between the chalaza and the nucellus shifted towards the distal end of pfs2 ovule primordia. In addition, leaves displayed curling and petals were wavy and crenulated. Overexpression of PFS2 affects floral organ and leaf development. Single- and double-mutant analyses reveal that PFS2 activity represses AGAMOUS expression in young floral primordia. Also involved in regulation of response to low temperature.	O.I.	C.G.	H.G.
403.9	100.0	33.1	At5g27580	832818	AGL89	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;P	O.I.	C.G.	H.G.
403.3	100.0	89.6	At5g12990	831139	CLE40 (CLAVATA3/ESR-RELATED 40)	Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.	O.I.	C.G.	H.G.
402.9	100.0	43.3	At5g43640	834384	40S ribosomal protein S15 (RPS15E)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;BOPMAF	O.I.	C.G.	H.G.
402.8	100.0	73.6	At5g08490	830748	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF	O.I.	C.G.	H.G.
401.5	100.0	52.2	At5g37970	833776	S-adenosyl-L-methionine:carboxyl methyltransferase family protein	F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:unknown;POBMF	O.I.	C.G.	H.G.
400.5	100.0	116.7	At3g42900	3769508	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
400.5	100.0	65.9	At3g29775	3769046	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
398.8	100.0	108.4	At2g04310	3768003	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
398.0	100.0	79.1	At5g28170	832893	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
397.3	100.0	55.0	At1g53950	841834	ubiquitin family protein	F:molecular_function unknown;P:protein modification process;C:cellular_component unknown;MOPFVB	O.I.	C.G.	H.G.
396.1	100.0	49.7	At3g50150	824177	unknown protein	F:unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
393.8	100.0	30.5	At5g37090	833680	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
393.7	100.0	48.5	At3g19070	821441	cell wall protein-related	F:transcription factor activity;P:regulation of transcription;C:unknown;OMFPBVA	O.I.	C.G.	H.G.
393.1	100.0	46.2	At4g02310	828070	kelch repeat-containing F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PM	O.I.	C.G.	H.G.
391.8	100.0	36.9	At4g36170	829774	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
391.6	100.0	34.8	At4g11745	826780	kelch repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBA	O.I.	C.G.	H.G.
390.3	100.0	41.5	At2g14810	815969	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
390.1	100.0	37.1	At1g74190	843759	AtRLP15 (Receptor Like Protein 15)	F:protein binding;P:signal transduction;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
387.5	100.0	30.6	At2g39520	818537	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
385.7	100.0	48.5	At1g71470	843488	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
385.6	100.0	37.1	At1g32480	840142	oxidoreductase/ oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor	F:oxidoreductase activity, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;P:metabolic process;C:unknown;BOMFAP	O.I.	C.G.	H.G.
385.3	100.0	45.0	At5g44470	834474	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.

Back to the CoP portal site

Back to the KAGIANA project homepage

GSM ID	GSM143302
Assay name	Ts_genomic_hyb_1
GSE experiment	GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

Microarray experiments to specifically-expressed genes

GSM ID GSM143302 Assay name Ts_genomic_hyb_1 GSE experiment GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1

GSM ID GSM143302

Assay name Ts_genomic_hyb_1

GSE experiment GSE6203: Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1