CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM142849

Assay name MG001_ATH1_A2-Torres-1N3

GSE experiment GSE6176: Impact of Type III effectors on plant defense responses

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
199.4 100.0 242.8 At3g45060 823641 ATNRT2.6 member of High affinity nitrate transporter family O.I. C.G. H.G.
106.6 99.9 214.9 At1g65390 842851 ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5) F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PB O.I. C.G. H.G.
83.4 99.9 88.5 At1g61380 842432 SD1-29 (S-DOMAIN-1 29) F:carbohydrate binding, protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
78.3 99.9 66.5 At4g04500 825780 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
75.6 99.9 119.2 At5g01540 831722 LECRKA4.1 (LECTIN RECEPTOR KINASE A4.1) Encodes LecRKA4.1, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination. O.I. C.G. H.G.
70.5 99.9 59.5 At4g23200 828419 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:vacuole;MPOBFVA O.I. C.G. H.G.
68.4 99.9 107.6 At3g47380 823892 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
66.6 99.8 56.4 At2g42360 818837 zinc finger (C3HC4-type RING finger) family protein F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV O.I. C.G. H.G.
66.2 99.8 115.8 At4g11890 826796 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
66.0 99.8 20.8 At4g04510 825781 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
63.0 99.8 120.6 At1g51800 841606 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
59.8 99.8 78.0 At1g51790 841605 kinase F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
59.1 99.8 174.4 At2g39200 818505 MLO12 (MILDEW RESISTANCE LOCUS O 12) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). O.I. C.G. H.G.
55.7 99.8 65.4 At4g23220 828421 kinase F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
52.4 99.8 50.7 At1g49000 841322 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
50.4 99.8 149.5 At2g19190 816436 FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1) Receptor-like protein kinase. Involved in early defense signaling. O.I. C.G. H.G.
50.1 99.8 31.5 At4g01750 827905 RGXT2 (rhamnogalacturonan xylosyltransferase 2) Encodes a protein with UDP-xylose-dependent xylosyltransferase activity, which transfers Xyl onto L-fucose and (albeit less efficiently) L-arabinose. The linkage to L-fucose was shown to be preferentially to the O-4 position. Analysis of mutant containing T-DNA insertion in this gene indicate that the RGXT2 protein might be involved in the synthesis of the α-D-Xyl-(1,3)-α-L-Fuc-(1,4)-L-Rha structure in pectic rhamnogalacturonan II. O.I. C.G. H.G.
47.8 99.8 41.9 At1g66910 843009 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
46.2 99.8 138.4 At3g54420 824608 ATEP3 encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs. O.I. C.G. H.G.
45.5 99.8 139.4 At3g22060 821768 receptor protein kinase-related contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain O.I. C.G. H.G.
45.3 99.8 250.4 At4g22470 828342 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVA O.I. C.G. H.G.
45.2 99.8 125.4 At1g10340 837573 ankyrin repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA O.I. C.G. H.G.
43.7 99.8 56.7 At4g01720 828001 WRKY47 member of WRKY Transcription Factor; Group II-b O.I. C.G. H.G.
43.5 99.8 159.0 At4g23140 828413 CRK6 (CYSTEINE-RICH RLK 6) Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) O.I. C.G. H.G.
43.5 99.8 141.9 At1g57630 842139 disease resistance protein (TIR class), putative F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P O.I. C.G. H.G.
43.2 99.8 35.6 At4g31980 829328 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFB O.I. C.G. H.G.
41.1 99.8 314.1 At1g19380 838521 unknown protein F:unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
41.1 99.8 140.7 At2g27690 817315 CYP94C1 Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment. O.I. C.G. H.G.
40.8 99.8 113.9 At1g02400 839508 GA2OX6 (GIBBERELLIN 2-OXIDASE 6) Encodes a gibberellin 2-oxidase. O.I. C.G. H.G.
40.3 99.8 76.2 At1g51850 841612 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
40.2 99.8 45.4 At5g06570 830545 hydrolase F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
38.1 99.8 51.9 At4g32800 829416 AP2 domain-containing transcription factor TINY, putative encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. O.I. C.G. H.G.
37.9 99.8 247.4 At4g36670 829820 mannitol transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMOPAV O.I. C.G. H.G.
37.5 99.7 35.6 At3g46110 823754 unknown protein F:unknown;P:unknown;C:plasma membrane;P O.I. C.G. H.G.
35.6 99.7 31.3 At4g05110 825856 equilibrative nucleoside transporter, putative (ENT6) F:nucleoside transmembrane transporter activity;P:transport;C:plasma membrane;MOPF O.I. C.G. H.G.
35.4 99.7 42.8 At4g27730 828887 OPT6 (OLIGOPEPTIDE TRANSPORTER 1) oligopeptide transporter O.I. C.G. H.G.
33.6 99.7 37.8 At2g29120 817460 ATGLR2.7 member of Putative ligand-gated ion channel subunit family O.I. C.G. H.G.
33.3 99.7 55.8 At1g51820 841609 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
32.7 99.7 92.8 At5g25440 832618 protein kinase family protein F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:nucleus, cytoplasm;MPOBFVA O.I. C.G. H.G.
32.1 99.7 109.8 At2g22880 816819 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
31.8 99.7 235.7 At3g19010 821434 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:flavonol synthase activity, oxidoreductase activity, iron ion binding;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFM O.I. C.G. H.G.
30.7 99.7 113.7 At3g21230 821677 4CL5 (4-coumarate:CoA ligase 5) The gene encodes a 4-coumarate coenzyme A ligase being able to use sinapate as substrate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, 5-OH-ferulic acid, ferulic acid and sinapic acid. At4CL5 was unable to use cinnamic acid as substrate. Knockout of At4CL5 (4cl5) revealed no effect on syringyl lignin content indicating that the activity observed does probably not occur in vivo. O.I. C.G. H.G.
30.3 99.7 58.1 At2g27660 817312 DC1 domain-containing protein F:zinc ion binding;P:unknown;C:chloroplast;BPMOFVA O.I. C.G. H.G.
30.3 99.7 43.0 At5g64000 836521 SAL2 3'(2'),5'-bisphosphate nucleotidase O.I. C.G. H.G.
30.1 99.7 37.3 At5g46330 834676 FLS2 (FLAGELLIN-SENSITIVE 2) Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB. O.I. C.G. H.G.
29.9 99.7 35.7 At5g44910 834521 Toll-Interleukin-Resistance (TIR) domain-containing protein F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P O.I. C.G. H.G.
29.8 99.7 207.2 At2g39210 818506 nodulin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPFMA O.I. C.G. H.G.
29.6 99.7 186.9 At3g19930 821531 STP4 (SUGAR TRANSPORTER 4) Encodes a sucrose hydrogen symporter that is induced by wounding. O.I. C.G. H.G.
29.5 99.7 312.8 At2g43620 818964 chitinase, putative F:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVM O.I. C.G. H.G.
29.3 99.7 72.1 At2g32680 817828 AtRLP23 (Receptor Like Protein 23) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
27.4 99.7 287.3 At2g17840 816293 ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7) Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis. O.I. C.G. H.G.
27.2 99.7 55.7 At4g23150 828414 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
26.7 99.7 25.0 At4g18250 827551 receptor serine/threonine kinase, putative F:transmembrane receptor protein serine/threonine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
26.1 99.7 27.4 At5g39020 833894 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
25.8 99.7 20.5 At5g54720 835561 ankyrin repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOBF O.I. C.G. H.G.
25.1 99.6 47.9 At1g58420 842211 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
25.0 99.6 25.3 At4g25110 828614 AtMC2 (metacaspase 2) F:cysteine-type endopeptidase activity;P:proteolysis;C:unknown;POMFBVA O.I. C.G. H.G.
24.7 99.6 165.8 At4g38550 830012 - F:unknown;P:unknown;C:chloroplast;MFPOBVA O.I. C.G. H.G.
24.6 99.6 60.1 At4g23210 828420 protein kinase family protein Encodes a Cysteine-rich receptor-like kinase (CRK13). Overexpression of CRK13 leads to hypersensitive response cell death, and induces defense against pathogens by causing increased accumulation of salicylic acid. O.I. C.G. H.G.
24.0 99.6 320.6 At1g52200 841650 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:plasma membrane;PFMO O.I. C.G. H.G.
23.7 99.6 153.9 At4g08850 826456 kinase F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, membrane;MPOBFVA O.I. C.G. H.G.
23.4 99.6 153.8 At4g01700 828131 chitinase, putative F:chitinase activity;P:cell wall macromolecule catabolic process;C:cell wall;PBOMVF O.I. C.G. H.G.
23.0 99.6 89.9 At3g52450 824410 PUB22 (PLANT U-BOX 22) Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. O.I. C.G. H.G.
22.9 99.6 165.3 At5g48540 834910 33 kDa secretory protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
22.4 99.6 107.0 At4g23570 828457 SGT1A Closely related to SGT1B, may function in SCF(TIR1) mediated protein degradation. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. AtSGT1a is induced upon pathogen infection and can function in R gene-mediated resistance. O.I. C.G. H.G.
22.3 99.6 42.6 At5g67450 836881 AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1) Encodes zinc-finger protein. mRNA levels are elevated in response to low temperature, cold temperatures and high salt. The protein is localized to the nucleus and acts as a transcriptional repressor. O.I. C.G. H.G.
22.3 99.6 16.6 At5g44210 834444 ERF9 (ERF DOMAIN PROTEIN 9) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. O.I. C.G. H.G.
21.9 99.6 104.6 At1g21130 838709 O-methyltransferase, putative F:methyltransferase activity, protein dimerization activity, O-methyltransferase activity;P:unknown;C:cytosol;PBFOM O.I. C.G. H.G.
21.7 99.6 30.4 At3g04110 819566 GLR1.1 (GLUTAMATE RECEPTOR 1.1) putative glutamate receptor (GLR1.1). Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis. O.I. C.G. H.G.
21.6 99.6 32.0 At2g30540 817603 glutaredoxin family protein F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFBO O.I. C.G. H.G.
21.4 99.6 225.9 At2g18690 816384 unknown protein F:molecular_function unknown;P:biological_process unknown;C:membrane;PB O.I. C.G. H.G.
21.3 99.6 53.3 At1g51890 841616 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
21.3 99.6 47.1 At5g44290 834452 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOFBVA O.I. C.G. H.G.
21.2 99.6 247.2 At3g50480 824212 HR4 (HOMOLOG OF RPW8 4) Homolog of RPW8 O.I. C.G. H.G.
21.2 99.6 101.0 At3g01830 820033 calmodulin-related protein, putative F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOB O.I. C.G. H.G.
21.2 99.6 59.5 At1g25390 839125 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
21.1 99.6 30.4 At4g04490 825779 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
21.1 99.6 21.3 At3g05660 819733 AtRLP33 (Receptor Like Protein 33) F:protein binding, kinase activity;P:signal transduction, defense response;C:chloroplast;PMOBFAV O.I. C.G. H.G.
21.0 99.6 37.9 At5g61560 836277 protein kinase family protein F:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:chloroplast, plasma membrane;MPOBFVA O.I. C.G. H.G.
21.0 99.6 35.7 At5g44370 834463 PHT4 Encodes an inorganic phosphate transporter (PHT4;6). O.I. C.G. H.G.
20.9 99.6 62.5 At5g42830 834294 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
20.9 99.6 34.5 At2g15390 816031 FUT4 Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundant with FUT1. O.I. C.G. H.G.
20.5 99.6 115.7 At2g17740 816283 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
20.5 99.6 34.2 At1g26420 839184 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOA O.I. C.G. H.G.
20.3 99.6 85.3 At1g26380 839180 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM O.I. C.G. H.G.
20.2 99.6 236.6 At4g14365 827080 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVA O.I. C.G. H.G.
20.1 99.6 31.6 At3g61150 825287 HDG1 (HOMEODOMAIN GLABROUS 1) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. O.I. C.G. H.G.
19.8 99.6 62.9 At1g61360 842430 S-locus lectin protein kinase family protein F:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
19.8 99.6 31.1 At4g24240 828525 WRKY7 Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family. O.I. C.G. H.G.
19.5 99.6 65.3 At1g35230 840412 AGP5 (ARABINOGALACTAN-PROTEIN 5) Encodes arabinogalactan-protein (AGP5). O.I. C.G. H.G.
19.5 99.6 33.2 At2g02220 814753 PSKR1 (PHYTOSULFOKIN RECEPTOR 1) Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ). O.I. C.G. H.G.
19.1 99.6 77.2 At5g23490 832415 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBF O.I. C.G. H.G.
19.0 99.5 108.2 At1g15010 838066 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PB O.I. C.G. H.G.
19.0 99.5 105.9 At4g20860 827834 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to cyclopentenone;C:endomembrane system;BFPOAM O.I. C.G. H.G.
18.9 99.5 105.7 At3g46280 823773 protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMFBO O.I. C.G. H.G.
18.7 99.5 117.9 At1g51805 841607 leucine-rich repeat protein kinase, putative F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
18.7 99.5 29.7 At1g51920 841620 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
18.5 99.5 51.2 At1g66090 842923 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PBOMF O.I. C.G. H.G.
18.4 99.5 13.5 At5g20480 832170 EFR (EF-TU RECEPTOR) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu. O.I. C.G. H.G.
18.3 99.5 69.6 At3g63380 825513 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
199.4	100.0	242.8	At3g45060	823641	ATNRT2.6	member of High affinity nitrate transporter family	O.I.	C.G.	H.G.
106.6	99.9	214.9	At1g65390	842851	ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5)	F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane, chloroplast;PB	O.I.	C.G.	H.G.
83.4	99.9	88.5	At1g61380	842432	SD1-29 (S-DOMAIN-1 29)	F:carbohydrate binding, protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
78.3	99.9	66.5	At4g04500	825780	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
75.6	99.9	119.2	At5g01540	831722	LECRKA4.1 (LECTIN RECEPTOR KINASE A4.1)	Encodes LecRKA4.1, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.	O.I.	C.G.	H.G.
70.5	99.9	59.5	At4g23200	828419	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:vacuole;MPOBFVA	O.I.	C.G.	H.G.
68.4	99.9	107.6	At3g47380	823892	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
66.6	99.8	56.4	At2g42360	818837	zinc finger (C3HC4-type RING finger) family protein	F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV	O.I.	C.G.	H.G.
66.2	99.8	115.8	At4g11890	826796	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
66.0	99.8	20.8	At4g04510	825781	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
63.0	99.8	120.6	At1g51800	841606	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
59.8	99.8	78.0	At1g51790	841605	kinase	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
59.1	99.8	174.4	At2g39200	818505	MLO12 (MILDEW RESISTANCE LOCUS O 12)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO6 belongs to the clade IV, with AtMLO2, AtMLO3 and AtMLO12. The gene is expressed during early seedling growth, in root tips and cotyledon vascular system, in floral organs (anthers and stigma), and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).	O.I.	C.G.	H.G.
55.7	99.8	65.4	At4g23220	828421	kinase	F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
52.4	99.8	50.7	At1g49000	841322	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
50.4	99.8	149.5	At2g19190	816436	FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1)	Receptor-like protein kinase. Involved in early defense signaling.	O.I.	C.G.	H.G.
50.1	99.8	31.5	At4g01750	827905	RGXT2 (rhamnogalacturonan xylosyltransferase 2)	Encodes a protein with UDP-xylose-dependent xylosyltransferase activity, which transfers Xyl onto L-fucose and (albeit less efficiently) L-arabinose. The linkage to L-fucose was shown to be preferentially to the O-4 position. Analysis of mutant containing T-DNA insertion in this gene indicate that the RGXT2 protein might be involved in the synthesis of the α-D-Xyl-(1,3)-α-L-Fuc-(1,4)-L-Rha structure in pectic rhamnogalacturonan II.	O.I.	C.G.	H.G.
47.8	99.8	41.9	At1g66910	843009	protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
46.2	99.8	138.4	At3g54420	824608	ATEP3	encodes an EP3 chitinase that is expressed during somatic embryogenesis in 'nursing' cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs.	O.I.	C.G.	H.G.
45.5	99.8	139.4	At3g22060	821768	receptor protein kinase-related	contains Pfam profile: PF01657 Domain of unknown function that is usually associated with protein kinase domain Pfam:PF00069, however this protein does not have the protein kinase domain	O.I.	C.G.	H.G.
45.3	99.8	250.4	At4g22470	828342	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVA	O.I.	C.G.	H.G.
45.2	99.8	125.4	At1g10340	837573	ankyrin repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA	O.I.	C.G.	H.G.
43.7	99.8	56.7	At4g01720	828001	WRKY47	member of WRKY Transcription Factor; Group II-b	O.I.	C.G.	H.G.
43.5	99.8	159.0	At4g23140	828413	CRK6 (CYSTEINE-RICH RLK 6)	Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)	O.I.	C.G.	H.G.
43.5	99.8	141.9	At1g57630	842139	disease resistance protein (TIR class), putative	F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P	O.I.	C.G.	H.G.
43.2	99.8	35.6	At4g31980	829328	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFB	O.I.	C.G.	H.G.
41.1	99.8	314.1	At1g19380	838521	unknown protein	F:unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
41.1	99.8	140.7	At2g27690	817315	CYP94C1	Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.	O.I.	C.G.	H.G.
40.8	99.8	113.9	At1g02400	839508	GA2OX6 (GIBBERELLIN 2-OXIDASE 6)	Encodes a gibberellin 2-oxidase.	O.I.	C.G.	H.G.
40.3	99.8	76.2	At1g51850	841612	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
40.2	99.8	45.4	At5g06570	830545	hydrolase	F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
38.1	99.8	51.9	At4g32800	829416	AP2 domain-containing transcription factor TINY, putative	encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.	O.I.	C.G.	H.G.
37.9	99.8	247.4	At4g36670	829820	mannitol transporter, putative	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMOPAV	O.I.	C.G.	H.G.
37.5	99.7	35.6	At3g46110	823754	unknown protein	F:unknown;P:unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
35.6	99.7	31.3	At4g05110	825856	equilibrative nucleoside transporter, putative (ENT6)	F:nucleoside transmembrane transporter activity;P:transport;C:plasma membrane;MOPF	O.I.	C.G.	H.G.
35.4	99.7	42.8	At4g27730	828887	OPT6 (OLIGOPEPTIDE TRANSPORTER 1)	oligopeptide transporter	O.I.	C.G.	H.G.
33.6	99.7	37.8	At2g29120	817460	ATGLR2.7	member of Putative ligand-gated ion channel subunit family	O.I.	C.G.	H.G.
33.3	99.7	55.8	At1g51820	841609	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
32.7	99.7	92.8	At5g25440	832618	protein kinase family protein	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:nucleus, cytoplasm;MPOBFVA	O.I.	C.G.	H.G.
32.1	99.7	109.8	At2g22880	816819	VQ motif-containing protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
31.8	99.7	235.7	At3g19010	821434	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:flavonol synthase activity, oxidoreductase activity, iron ion binding;P:flavonoid biosynthetic process;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
30.7	99.7	113.7	At3g21230	821677	4CL5 (4-coumarate:CoA ligase 5)	The gene encodes a 4-coumarate coenzyme A ligase being able to use sinapate as substrate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, 5-OH-ferulic acid, ferulic acid and sinapic acid. At4CL5 was unable to use cinnamic acid as substrate. Knockout of At4CL5 (4cl5) revealed no effect on syringyl lignin content indicating that the activity observed does probably not occur in vivo.	O.I.	C.G.	H.G.
30.3	99.7	58.1	At2g27660	817312	DC1 domain-containing protein	F:zinc ion binding;P:unknown;C:chloroplast;BPMOFVA	O.I.	C.G.	H.G.
30.3	99.7	43.0	At5g64000	836521	SAL2	3'(2'),5'-bisphosphate nucleotidase	O.I.	C.G.	H.G.
30.1	99.7	37.3	At5g46330	834676	FLS2 (FLAGELLIN-SENSITIVE 2)	Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB.	O.I.	C.G.	H.G.
29.9	99.7	35.7	At5g44910	834521	Toll-Interleukin-Resistance (TIR) domain-containing protein	F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P	O.I.	C.G.	H.G.
29.8	99.7	207.2	At2g39210	818506	nodulin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBPFMA	O.I.	C.G.	H.G.
29.6	99.7	186.9	At3g19930	821531	STP4 (SUGAR TRANSPORTER 4)	Encodes a sucrose hydrogen symporter that is induced by wounding.	O.I.	C.G.	H.G.
29.5	99.7	312.8	At2g43620	818964	chitinase, putative	F:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVM	O.I.	C.G.	H.G.
29.3	99.7	72.1	At2g32680	817828	AtRLP23 (Receptor Like Protein 23)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
27.4	99.7	287.3	At2g17840	816293	ERD7 (EARLY-RESPONSIVE TO DEHYDRATION 7)	Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.	O.I.	C.G.	H.G.
27.2	99.7	55.7	At4g23150	828414	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
26.7	99.7	25.0	At4g18250	827551	receptor serine/threonine kinase, putative	F:transmembrane receptor protein serine/threonine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
26.1	99.7	27.4	At5g39020	833894	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
25.8	99.7	20.5	At5g54720	835561	ankyrin repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOBF	O.I.	C.G.	H.G.
25.1	99.6	47.9	At1g58420	842211	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
25.0	99.6	25.3	At4g25110	828614	AtMC2 (metacaspase 2)	F:cysteine-type endopeptidase activity;P:proteolysis;C:unknown;POMFBVA	O.I.	C.G.	H.G.
24.7	99.6	165.8	At4g38550	830012	-	F:unknown;P:unknown;C:chloroplast;MFPOBVA	O.I.	C.G.	H.G.
24.6	99.6	60.1	At4g23210	828420	protein kinase family protein	Encodes a Cysteine-rich receptor-like kinase (CRK13). Overexpression of CRK13 leads to hypersensitive response cell death, and induces defense against pathogens by causing increased accumulation of salicylic acid.	O.I.	C.G.	H.G.
24.0	99.6	320.6	At1g52200	841650	unknown protein	F:molecular_function unknown;P:response to oxidative stress;C:plasma membrane;PFMO	O.I.	C.G.	H.G.
23.7	99.6	153.9	At4g08850	826456	kinase	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, membrane;MPOBFVA	O.I.	C.G.	H.G.
23.4	99.6	153.8	At4g01700	828131	chitinase, putative	F:chitinase activity;P:cell wall macromolecule catabolic process;C:cell wall;PBOMVF	O.I.	C.G.	H.G.
23.0	99.6	89.9	At3g52450	824410	PUB22 (PLANT U-BOX 22)	Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.	O.I.	C.G.	H.G.
22.9	99.6	165.3	At5g48540	834910	33 kDa secretory protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
22.4	99.6	107.0	At4g23570	828457	SGT1A	Closely related to SGT1B, may function in SCF(TIR1) mediated protein degradation. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. AtSGT1a is induced upon pathogen infection and can function in R gene-mediated resistance.	O.I.	C.G.	H.G.
22.3	99.6	42.6	At5g67450	836881	AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1)	Encodes zinc-finger protein. mRNA levels are elevated in response to low temperature, cold temperatures and high salt. The protein is localized to the nucleus and acts as a transcriptional repressor.	O.I.	C.G.	H.G.
22.3	99.6	16.6	At5g44210	834444	ERF9 (ERF DOMAIN PROTEIN 9)	encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.	O.I.	C.G.	H.G.
21.9	99.6	104.6	At1g21130	838709	O-methyltransferase, putative	F:methyltransferase activity, protein dimerization activity, O-methyltransferase activity;P:unknown;C:cytosol;PBFOM	O.I.	C.G.	H.G.
21.7	99.6	30.4	At3g04110	819566	GLR1.1 (GLUTAMATE RECEPTOR 1.1)	putative glutamate receptor (GLR1.1). Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis.	O.I.	C.G.	H.G.
21.6	99.6	32.0	At2g30540	817603	glutaredoxin family protein	F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFBO	O.I.	C.G.	H.G.
21.4	99.6	225.9	At2g18690	816384	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:membrane;PB	O.I.	C.G.	H.G.
21.3	99.6	53.3	At1g51890	841616	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
21.3	99.6	47.1	At5g44290	834452	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane;MPOFBVA	O.I.	C.G.	H.G.
21.2	99.6	247.2	At3g50480	824212	HR4 (HOMOLOG OF RPW8 4)	Homolog of RPW8	O.I.	C.G.	H.G.
21.2	99.6	101.0	At3g01830	820033	calmodulin-related protein, putative	F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOB	O.I.	C.G.	H.G.
21.2	99.6	59.5	At1g25390	839125	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
21.1	99.6	30.4	At4g04490	825779	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
21.1	99.6	21.3	At3g05660	819733	AtRLP33 (Receptor Like Protein 33)	F:protein binding, kinase activity;P:signal transduction, defense response;C:chloroplast;PMOBFAV	O.I.	C.G.	H.G.
21.0	99.6	37.9	At5g61560	836277	protein kinase family protein	F:in 6 functions;P:protein amino acid phosphorylation, protein ubiquitination;C:chloroplast, plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
21.0	99.6	35.7	At5g44370	834463	PHT4	Encodes an inorganic phosphate transporter (PHT4;6).	O.I.	C.G.	H.G.
20.9	99.6	62.5	At5g42830	834294	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
20.9	99.6	34.5	At2g15390	816031	FUT4	Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundant with FUT1.	O.I.	C.G.	H.G.
20.5	99.6	115.7	At2g17740	816283	DC1 domain-containing protein	F:unknown;P:unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
20.5	99.6	34.2	At1g26420	839184	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOA	O.I.	C.G.	H.G.
20.3	99.6	85.3	At1g26380	839180	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFPOAM	O.I.	C.G.	H.G.
20.2	99.6	236.6	At4g14365	827080	zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVA	O.I.	C.G.	H.G.
20.1	99.6	31.6	At3g61150	825287	HDG1 (HOMEODOMAIN GLABROUS 1)	Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.	O.I.	C.G.	H.G.
19.8	99.6	62.9	At1g61360	842430	S-locus lectin protein kinase family protein	F:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
19.8	99.6	31.1	At4g24240	828525	WRKY7	Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.	O.I.	C.G.	H.G.
19.5	99.6	65.3	At1g35230	840412	AGP5 (ARABINOGALACTAN-PROTEIN 5)	Encodes arabinogalactan-protein (AGP5).	O.I.	C.G.	H.G.
19.5	99.6	33.2	At2g02220	814753	PSKR1 (PHYTOSULFOKIN RECEPTOR 1)	Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).	O.I.	C.G.	H.G.
19.1	99.6	77.2	At5g23490	832415	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMBF	O.I.	C.G.	H.G.
19.0	99.5	108.2	At1g15010	838066	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PB	O.I.	C.G.	H.G.
19.0	99.5	105.9	At4g20860	827834	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to cyclopentenone;C:endomembrane system;BFPOAM	O.I.	C.G.	H.G.
18.9	99.5	105.7	At3g46280	823773	protein kinase-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMFBO	O.I.	C.G.	H.G.
18.7	99.5	117.9	At1g51805	841607	leucine-rich repeat protein kinase, putative	F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
18.7	99.5	29.7	At1g51920	841620	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
18.5	99.5	51.2	At1g66090	842923	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PBOMF	O.I.	C.G.	H.G.
18.4	99.5	13.5	At5g20480	832170	EFR (EF-TU RECEPTOR)	Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.	O.I.	C.G.	H.G.
18.3	99.5	69.6	At3g63380	825513	calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)	F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV	O.I.	C.G.	H.G.

Back to the CoP portal site

Back to the KAGIANA project homepage

GSM ID	GSM142849
Assay name	MG001_ATH1_A2-Torres-1N3
GSE experiment	GSE6176: Impact of Type III effectors on plant defense responses

Microarray experiments to specifically-expressed genes

GSM ID GSM142849 Assay name MG001_ATH1_A2-Torres-1N3 GSE experiment GSE6176: Impact of Type III effectors on plant defense responses

GSM ID GSM142849

Assay name MG001_ATH1_A2-Torres-1N3

GSE experiment GSE6176: Impact of Type III effectors on plant defense responses