CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM142844

Assay name MG001_ATH1_A25-Torres-8N1

GSE experiment GSE6176: Impact of Type III effectors on plant defense responses

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
220.3 100.0 131.4 At5g60800 836201 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:unknown;POMFBVA O.I. C.G. H.G.
206.6 100.0 200.4 At3g11480 820321 BSMT1 The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism. O.I. C.G. H.G.
200.4 100.0 215.8 At1g13340 837894 unknown protein F:unknown;P:response to oxidative stress;C:unknown;MPFO O.I. C.G. H.G.
162.2 99.9 135.3 At1g33960 840293 AIG1 (AVRRPT2-INDUCED GENE 1) Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2 O.I. C.G. H.G.
159.0 99.9 163.7 At2g45760 819184 BAP2 (BON ASSOCIATION PROTEIN 2) encodes a protein that is similar to BONZAI1-binding protein BAP1. O.I. C.G. H.G.
155.8 99.9 303.7 At3g47540 823908 chitinase, putative F:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBMOF O.I. C.G. H.G.
141.1 99.9 221.6 At5g13320 831173 PBS3 (AVRPPHB SUSCEPTIBLE 3) Encodes PBS3 (avrPphB susceptible), also known as GDG1 (GH3-Like Defense Gene 1)， WIN3 (HopW1-1-Interacting 3). Involved in disease-resistance signaling pathway. Required for accumulation of salicylic acid, activation of defense responses and resistance to Pseudomonas syringae. Expression detected in cotyledons, true leaves, hypocotyls and occasionally in some parts of roots from 10-day-old seedlings. No expression was detected in root, stem, rosette or cauline leaves of mature 4- to 5-week-old plants. O.I. C.G. H.G.
137.3 99.9 138.4 At3g14060 820620 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cell wall, cytoplasm;P O.I. C.G. H.G.
123.9 99.9 108.4 At3g21080 821660 ABC transporter-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
122.6 99.9 76.9 At2g47950 819407 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
122.1 99.9 142.9 At3g13910 820604 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P O.I. C.G. H.G.
116.1 99.9 279.6 At1g43910 840990 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAV O.I. C.G. H.G.
111.6 99.9 149.0 At3g47480 823902 calcium-binding EF hand family protein F:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOB O.I. C.G. H.G.
110.1 99.9 26.5 At3g57950 824964 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
109.2 99.9 51.1 At3g26820 822297 esterase/lipase/thioesterase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:biological_process unknown;C:unknown;BPOMF O.I. C.G. H.G.
108.8 99.9 100.2 At3g52430 824408 PAD4 (PHYTOALEXIN DEFICIENT 4) Encodes a lipase-like gene that is important for salicylic acid signaling and function in resistance (R) gene-mediated and basal plant disease resistance. PAD4 can interact directly with EDS1, another disease resistance signaling protein. Expressed at elevated level in response to green peach aphid (GPA) feeding, and modulates the GPA feeding-induced leaf senescence through a mechanism that doesn't require camalexin synthesis and salicylic acid (SA) signaling. O.I. C.G. H.G.
104.2 99.9 163.0 At1g21525 3766777 - pseudogene of unknown protein O.I. C.G. H.G.
101.6 99.9 216.9 At1g57630 842139 disease resistance protein (TIR class), putative F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P O.I. C.G. H.G.
100.1 99.9 112.6 At3g46660 823819 UGT76E12 (UDP-GLUCOSYL TRANSFERASE 76E12) F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
94.8 99.9 138.6 At4g11890 826796 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
91.4 99.9 225.1 At3g55970 824763 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, iron ion binding;P:unknown;C:cellular_component unknown;POBFM O.I. C.G. H.G.
90.9 99.9 89.6 At2g46510 819262 ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR) Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive. O.I. C.G. H.G.
90.7 99.9 45.2 At3g57460 824913 catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding F:metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding;P:proteolysis;C:cellular_component unknown;MBFPO O.I. C.G. H.G.
85.8 99.9 9.6 At4g05030 825845 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:mitochondrion;P O.I. C.G. H.G.
82.4 99.9 98.3 At4g29740 829096 CKX4 (CYTOKININ OXIDASE 4) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. O.I. C.G. H.G.
81.6 99.9 329.3 At4g37990 829955 ELI3-2 (ELICITOR-ACTIVATED GENE 3-2) Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity. O.I. C.G. H.G.
78.2 99.9 57.2 At1g72890 843620 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMO O.I. C.G. H.G.
73.1 99.9 27.5 At3g43250 823400 cell cycle control protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPB O.I. C.G. H.G.
70.6 99.9 61.0 At1g80110 844351 ATPP2-B11 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-B11) F:carbohydrate binding;P:unknown;C:nucleus;P O.I. C.G. H.G.
68.9 99.9 25.7 At1g30850 839969 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
68.3 99.9 11.2 At1g13310 837891 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
67.5 99.8 274.9 At4g12500 826862 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:unknown;POBMVFA O.I. C.G. H.G.
66.7 99.8 320.3 At3g60420 825213 - F:unknown;P:unknown;C:cellular_component unknown;OBFPM O.I. C.G. H.G.
66.5 99.8 129.5 At2g29460 817495 ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
62.8 99.8 190.7 At5g07010 830592 ST2A (SULFOTRANSFERASE 2A) Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor). O.I. C.G. H.G.
62.7 99.8 98.8 At1g61120 842405 TPS04 (TERPENE SYNTHASE 04) Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum. O.I. C.G. H.G.
60.1 99.8 336.0 At2g38240 818403 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity;P:response to salt stress;C:unknown;POBFM O.I. C.G. H.G.
58.3 99.8 412.8 At2g24850 817022 TAT3 (TYROSINE AMINOTRANSFERASE 3) Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid. O.I. C.G. H.G.
56.5 99.8 76.6 At1g73805 843716 calmodulin binding F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
55.5 99.8 166.8 At5g13220 831162 JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10) Plants overexpressing At5g13220.3, but not At5g13220.1 showed enhanced insensitivity to MeJa. O.I. C.G. H.G.
55.5 99.8 75.0 At5g38895 833881 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:response to chitin;C:unknown;MPOFV O.I. C.G. H.G.
55.1 99.8 246.3 At1g52890 841722 ANAC019 (Arabidopsis NAC domain containing protein 19) encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro. O.I. C.G. H.G.
53.7 99.8 121.8 At5g62150 836335 peptidoglycan-binding LysM domain-containing protein F:molecular_function unknown;P:cell wall macromolecule catabolic process;C:endomembrane system;P O.I. C.G. H.G.
53.4 99.8 46.7 At4g15660 827243 glutaredoxin family protein F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFOB O.I. C.G. H.G.
52.6 99.8 132.1 At4g39030 830058 EDS5 (ENHANCED DISEASE SUSCEPTIBILITY 5) Encodes an orphan multidrug and toxin extrusion transporter. Essential component of salicylic acid-dependent signaling for disease resistance. Member of the MATE-transporter family. Expression induced by salicylic acid. Mutants are salicylic acid-deficient. O.I. C.G. H.G.
50.6 99.8 99.4 At3g50260 824188 CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1) encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
49.8 99.8 121.3 At1g72940 843625 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PB O.I. C.G. H.G.
48.5 99.8 53.5 At1g70690 843406 HWI1 (HOPW1-1-INDUCED GENE1) Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain. O.I. C.G. H.G.
48.4 99.8 44.9 At2g43320 818933 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MPOFB O.I. C.G. H.G.
48.3 99.8 21.8 At1g80590 844398 WRKY66 member of WRKY Transcription Factor; Group III O.I. C.G. H.G.
47.1 99.8 150.5 At3g01830 820033 calmodulin-related protein, putative F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOB O.I. C.G. H.G.
46.4 99.8 83.9 At4g37430 829897 CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2) Encodes a member of the CYP81F cytochrome P450 monooxygenase subfamily. O.I. C.G. H.G.
45.8 99.8 55.5 At3g15770 820820 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
45.1 99.8 57.4 At1g02750 839432 zinc ion binding F:zinc ion binding;P:response to water deprivation;C:intracellular;PM O.I. C.G. H.G.
44.7 99.8 20.6 At2g35730 818143 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:endomembrane system;P O.I. C.G. H.G.
43.8 99.8 94.8 At4g26060 828712 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
43.5 99.8 256.7 At2g39030 818489 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
43.5 99.8 116.6 At1g10585 837600 transcription factor F:transcription factor activity;P:regulation of transcription;C:nucleus;P O.I. C.G. H.G.
42.5 99.8 29.9 At5g64530 836574 XND1 F:transcription factor activity;P:multicellular organismal development, shoot development, xylem histogenesis, programmed cell death;C:cellular_component unknown;P O.I. C.G. H.G.
40.8 99.8 24.2 At4g22980 828397 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOBA O.I. C.G. H.G.
40.2 99.8 206.5 At1g26770 839218 ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10) Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
40.0 99.8 181.2 At2g30550 817604 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:chloroplast;PFOBMV O.I. C.G. H.G.
39.0 99.8 72.2 At4g35600 829712 CONNEXIN 32 plant-type connexin (gap junction-type protein), a component of plasmodesmata O.I. C.G. H.G.
39.0 99.8 26.4 At5g48400 834895 ATGLR1.2 member of Putative ligand-gated ion channel subunit family O.I. C.G. H.G.
38.6 99.8 16.7 At2g06255 815182 ELF4-L3 (ELF4-Like 3) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
38.2 99.8 139.5 At5g26920 832750 CBP60G (CAM-BINDING PROTEIN 60-LIKE.G) Encodes a calmodulin-binding protein CBP60g (calmodulin binding protein 60-like.g). The calmodulin-binding domain is located near the N-terminus; calmodulin binding is dependent on Ca(2+). Inducible by both bacterial pathogen and MAMP (microbe-associated molecular pattern) treatments. Bacterial growth is enhanced in cbp60g mutants. cbp60g mutants also show defects in salicylic acid (SA) accumulation and SA signaling. O.I. C.G. H.G.
37.9 99.8 157.1 At2g34070 817968 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
37.4 99.7 32.0 At1g62840 842584 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
36.8 99.7 71.1 At5g36220 833619 CYP81D1 (CYTOCHROME P450 81D1) member of CYP81D O.I. C.G. H.G.
36.8 99.7 14.7 At1g72540 843586 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA O.I. C.G. H.G.
36.2 99.7 144.7 At2g04450 814985 ATNUDT6 (Arabidopsis thaliana Nudix hydrolase homolog 6) F:ADP-ribose diphosphatase activity, hydrolase activity, NAD or NADH binding;P:response to other organism;C:cytosol;OBMPAFV O.I. C.G. H.G.
35.9 99.7 63.8 At5g25250 832596 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPAV O.I. C.G. H.G.
35.1 99.7 174.8 At3g48520 824011 CYP94B3 member of CYP94B O.I. C.G. H.G.
35.0 99.7 125.7 At1g08920 837413 sugar transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA O.I. C.G. H.G.
34.9 99.7 270.7 At4g27410 828849 RD26 (RESPONSIVE TO DESICCATION 26) Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response. O.I. C.G. H.G.
33.6 99.7 150.9 At1g43160 840915 RAP2.6 (related to AP2 6) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily. O.I. C.G. H.G.
33.4 99.7 52.4 At3g06890 819874 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
33.4 99.7 25.8 At5g17450 831611 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related F:metal ion binding;P:metal ion transport;C:unknown;PFBM O.I. C.G. H.G.
33.3 99.7 69.8 At4g23210 828420 protein kinase family protein Encodes a Cysteine-rich receptor-like kinase (CRK13). Overexpression of CRK13 leads to hypersensitive response cell death, and induces defense against pathogens by causing increased accumulation of salicylic acid. O.I. C.G. H.G.
33.2 99.7 79.9 At3g22160 821780 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMFBV O.I. C.G. H.G.
32.7 99.7 341.6 At4g12490 826861 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:defense response to fungus, lipid transport;C:unknown;PBOMVFA O.I. C.G. H.G.
32.3 99.7 26.3 At1g57560 842131 AtMYB50 (myb domain protein 50) Member of the R2R3 factor gene family. O.I. C.G. H.G.
32.0 99.7 62.5 At5g46230 834665 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
31.8 99.7 110.3 At1g73800 - - O.I. C.G. H.G.
31.8 99.7 32.3 At2g04430 814983 atnudt5 (Arabidopsis thaliana Nudix hydrolase homolog 5) F:hydrolase activity;P:unknown;C:cytosol;BOMPAFV O.I. C.G. H.G.
31.6 99.7 32.2 At4g02360 827767 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
31.3 99.7 96.0 At2g28400 817388 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
31.3 99.7 12.3 At3g12220 820402 scpl16 (serine carboxypeptidase-like 16) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO O.I. C.G. H.G.
31.2 99.7 94.8 At5g39670 833963 calcium-binding EF hand family protein F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOB O.I. C.G. H.G.
30.8 99.7 85.5 At3g13950 820608 unknown protein F:molecular_function unknown;P:unknown;C:unknown;P O.I. C.G. H.G.
30.7 99.7 291.0 At2g43510 818952 ATTI1 Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory. O.I. C.G. H.G.
30.6 99.7 41.6 At4g04500 825780 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
30.6 99.7 29.7 At3g13100 820498 ATMRP7 member of MRP subfamily O.I. C.G. H.G.
29.5 99.7 58.0 At4g23150 828414 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
29.5 99.7 22.5 At5g45090 834541 AtPP2-A7 (Phloem protein 2-A7) F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P O.I. C.G. H.G.
28.3 99.7 266.0 At2g43570 818959 chitinase, putative F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMV O.I. C.G. H.G.
28.1 99.7 141.6 At2g45220 819130 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:membrane, plant-type cell wall;PBFOM O.I. C.G. H.G.
28.1 99.7 48.4 At1g53030 841736 cytochrome c oxidase copper chaperone family protein encodes a copper chaperone, can functional complements the yeast COX17 null mutant. May play a role in the delivery of copper to mitochondria. Expressed in roots and thus may also play a role in copper transport in the roots. O.I. C.G. H.G.
27.9 99.7 20.0 At5g67310 836866 CYP81G1 member of CYP81G O.I. C.G. H.G.
27.7 99.7 303.4 At2g43620 818964 chitinase, putative F:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVM O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
220.3	100.0	131.4	At5g60800	836201	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:unknown;POMFBVA	O.I.	C.G.	H.G.
206.6	100.0	200.4	At3g11480	820321	BSMT1	The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism.	O.I.	C.G.	H.G.
200.4	100.0	215.8	At1g13340	837894	unknown protein	F:unknown;P:response to oxidative stress;C:unknown;MPFO	O.I.	C.G.	H.G.
162.2	99.9	135.3	At1g33960	840293	AIG1 (AVRRPT2-INDUCED GENE 1)	Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2	O.I.	C.G.	H.G.
159.0	99.9	163.7	At2g45760	819184	BAP2 (BON ASSOCIATION PROTEIN 2)	encodes a protein that is similar to BONZAI1-binding protein BAP1.	O.I.	C.G.	H.G.
155.8	99.9	303.7	At3g47540	823908	chitinase, putative	F:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBMOF	O.I.	C.G.	H.G.
141.1	99.9	221.6	At5g13320	831173	PBS3 (AVRPPHB SUSCEPTIBLE 3)	Encodes PBS3 (avrPphB susceptible), also known as GDG1 (GH3-Like Defense Gene 1)， WIN3 (HopW1-1-Interacting 3). Involved in disease-resistance signaling pathway. Required for accumulation of salicylic acid, activation of defense responses and resistance to Pseudomonas syringae. Expression detected in cotyledons, true leaves, hypocotyls and occasionally in some parts of roots from 10-day-old seedlings. No expression was detected in root, stem, rosette or cauline leaves of mature 4- to 5-week-old plants.	O.I.	C.G.	H.G.
137.3	99.9	138.4	At3g14060	820620	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cell wall, cytoplasm;P	O.I.	C.G.	H.G.
123.9	99.9	108.4	At3g21080	821660	ABC transporter-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
122.6	99.9	76.9	At2g47950	819407	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
122.1	99.9	142.9	At3g13910	820604	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
116.1	99.9	279.6	At1g43910	840990	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAV	O.I.	C.G.	H.G.
111.6	99.9	149.0	At3g47480	823902	calcium-binding EF hand family protein	F:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOB	O.I.	C.G.	H.G.
110.1	99.9	26.5	At3g57950	824964	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
109.2	99.9	51.1	At3g26820	822297	esterase/lipase/thioesterase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:biological_process unknown;C:unknown;BPOMF	O.I.	C.G.	H.G.
108.8	99.9	100.2	At3g52430	824408	PAD4 (PHYTOALEXIN DEFICIENT 4)	Encodes a lipase-like gene that is important for salicylic acid signaling and function in resistance (R) gene-mediated and basal plant disease resistance. PAD4 can interact directly with EDS1, another disease resistance signaling protein. Expressed at elevated level in response to green peach aphid (GPA) feeding, and modulates the GPA feeding-induced leaf senescence through a mechanism that doesn't require camalexin synthesis and salicylic acid (SA) signaling.	O.I.	C.G.	H.G.
104.2	99.9	163.0	At1g21525	3766777	-	pseudogene of unknown protein	O.I.	C.G.	H.G.
101.6	99.9	216.9	At1g57630	842139	disease resistance protein (TIR class), putative	F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P	O.I.	C.G.	H.G.
100.1	99.9	112.6	At3g46660	823819	UGT76E12 (UDP-GLUCOSYL TRANSFERASE 76E12)	F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
94.8	99.9	138.6	At4g11890	826796	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
91.4	99.9	225.1	At3g55970	824763	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, iron ion binding;P:unknown;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
90.9	99.9	89.6	At2g46510	819262	ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR)	Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive.	O.I.	C.G.	H.G.
90.7	99.9	45.2	At3g57460	824913	catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding	F:metalloendopeptidase activity, zinc ion binding, catalytic activity, metal ion binding;P:proteolysis;C:cellular_component unknown;MBFPO	O.I.	C.G.	H.G.
85.8	99.9	9.6	At4g05030	825845	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:mitochondrion;P	O.I.	C.G.	H.G.
82.4	99.9	98.3	At4g29740	829096	CKX4 (CYTOKININ OXIDASE 4)	It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.	O.I.	C.G.	H.G.
81.6	99.9	329.3	At4g37990	829955	ELI3-2 (ELICITOR-ACTIVATED GENE 3-2)	Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity.	O.I.	C.G.	H.G.
78.2	99.9	57.2	At1g72890	843620	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMO	O.I.	C.G.	H.G.
73.1	99.9	27.5	At3g43250	823400	cell cycle control protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPB	O.I.	C.G.	H.G.
70.6	99.9	61.0	At1g80110	844351	ATPP2-B11 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-B11)	F:carbohydrate binding;P:unknown;C:nucleus;P	O.I.	C.G.	H.G.
68.9	99.9	25.7	At1g30850	839969	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
68.3	99.9	11.2	At1g13310	837891	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
67.5	99.8	274.9	At4g12500	826862	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:unknown;POBMVFA	O.I.	C.G.	H.G.
66.7	99.8	320.3	At3g60420	825213	-	F:unknown;P:unknown;C:cellular_component unknown;OBFPM	O.I.	C.G.	H.G.
66.5	99.8	129.5	At2g29460	817495	ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
62.8	99.8	190.7	At5g07010	830592	ST2A (SULFOTRANSFERASE 2A)	Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).	O.I.	C.G.	H.G.
62.7	99.8	98.8	At1g61120	842405	TPS04 (TERPENE SYNTHASE 04)	Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum.	O.I.	C.G.	H.G.
60.1	99.8	336.0	At2g38240	818403	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity;P:response to salt stress;C:unknown;POBFM	O.I.	C.G.	H.G.
58.3	99.8	412.8	At2g24850	817022	TAT3 (TYROSINE AMINOTRANSFERASE 3)	Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid.	O.I.	C.G.	H.G.
56.5	99.8	76.6	At1g73805	843716	calmodulin binding	F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
55.5	99.8	166.8	At5g13220	831162	JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)	Plants overexpressing At5g13220.3, but not At5g13220.1 showed enhanced insensitivity to MeJa.	O.I.	C.G.	H.G.
55.5	99.8	75.0	At5g38895	833881	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:response to chitin;C:unknown;MPOFV	O.I.	C.G.	H.G.
55.1	99.8	246.3	At1g52890	841722	ANAC019 (Arabidopsis NAC domain containing protein 19)	encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro.	O.I.	C.G.	H.G.
53.7	99.8	121.8	At5g62150	836335	peptidoglycan-binding LysM domain-containing protein	F:molecular_function unknown;P:cell wall macromolecule catabolic process;C:endomembrane system;P	O.I.	C.G.	H.G.
53.4	99.8	46.7	At4g15660	827243	glutaredoxin family protein	F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
52.6	99.8	132.1	At4g39030	830058	EDS5 (ENHANCED DISEASE SUSCEPTIBILITY 5)	Encodes an orphan multidrug and toxin extrusion transporter. Essential component of salicylic acid-dependent signaling for disease resistance. Member of the MATE-transporter family. Expression induced by salicylic acid. Mutants are salicylic acid-deficient.	O.I.	C.G.	H.G.
50.6	99.8	99.4	At3g50260	824188	CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1)	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
49.8	99.8	121.3	At1g72940	843625	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PB	O.I.	C.G.	H.G.
48.5	99.8	53.5	At1g70690	843406	HWI1 (HOPW1-1-INDUCED GENE1)	Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.	O.I.	C.G.	H.G.
48.4	99.8	44.9	At2g43320	818933	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MPOFB	O.I.	C.G.	H.G.
48.3	99.8	21.8	At1g80590	844398	WRKY66	member of WRKY Transcription Factor; Group III	O.I.	C.G.	H.G.
47.1	99.8	150.5	At3g01830	820033	calmodulin-related protein, putative	F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOB	O.I.	C.G.	H.G.
46.4	99.8	83.9	At4g37430	829897	CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2)	Encodes a member of the CYP81F cytochrome P450 monooxygenase subfamily.	O.I.	C.G.	H.G.
45.8	99.8	55.5	At3g15770	820820	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
45.1	99.8	57.4	At1g02750	839432	zinc ion binding	F:zinc ion binding;P:response to water deprivation;C:intracellular;PM	O.I.	C.G.	H.G.
44.7	99.8	20.6	At2g35730	818143	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:endomembrane system;P	O.I.	C.G.	H.G.
43.8	99.8	94.8	At4g26060	828712	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
43.5	99.8	256.7	At2g39030	818489	GCN5-related N-acetyltransferase (GNAT) family protein	F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
43.5	99.8	116.6	At1g10585	837600	transcription factor	F:transcription factor activity;P:regulation of transcription;C:nucleus;P	O.I.	C.G.	H.G.
42.5	99.8	29.9	At5g64530	836574	XND1	F:transcription factor activity;P:multicellular organismal development, shoot development, xylem histogenesis, programmed cell death;C:cellular_component unknown;P	O.I.	C.G.	H.G.
40.8	99.8	24.2	At4g22980	828397	-	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOBA	O.I.	C.G.	H.G.
40.2	99.8	206.5	At1g26770	839218	ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10)	Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
40.0	99.8	181.2	At2g30550	817604	lipase class 3 family protein	F:triacylglycerol lipase activity;P:lipid metabolic process;C:chloroplast;PFOBMV	O.I.	C.G.	H.G.
39.0	99.8	72.2	At4g35600	829712	CONNEXIN 32	plant-type connexin (gap junction-type protein), a component of plasmodesmata	O.I.	C.G.	H.G.
39.0	99.8	26.4	At5g48400	834895	ATGLR1.2	member of Putative ligand-gated ion channel subunit family	O.I.	C.G.	H.G.
38.6	99.8	16.7	At2g06255	815182	ELF4-L3 (ELF4-Like 3)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
38.2	99.8	139.5	At5g26920	832750	CBP60G (CAM-BINDING PROTEIN 60-LIKE.G)	Encodes a calmodulin-binding protein CBP60g (calmodulin binding protein 60-like.g). The calmodulin-binding domain is located near the N-terminus; calmodulin binding is dependent on Ca(2+). Inducible by both bacterial pathogen and MAMP (microbe-associated molecular pattern) treatments. Bacterial growth is enhanced in cbp60g mutants. cbp60g mutants also show defects in salicylic acid (SA) accumulation and SA signaling.	O.I.	C.G.	H.G.
37.9	99.8	157.1	At2g34070	817968	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
37.4	99.7	32.0	At1g62840	842584	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
36.8	99.7	71.1	At5g36220	833619	CYP81D1 (CYTOCHROME P450 81D1)	member of CYP81D	O.I.	C.G.	H.G.
36.8	99.7	14.7	At1g72540	843586	protein kinase, putative	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA	O.I.	C.G.	H.G.
36.2	99.7	144.7	At2g04450	814985	ATNUDT6 (Arabidopsis thaliana Nudix hydrolase homolog 6)	F:ADP-ribose diphosphatase activity, hydrolase activity, NAD or NADH binding;P:response to other organism;C:cytosol;OBMPAFV	O.I.	C.G.	H.G.
35.9	99.7	63.8	At5g25250	832596	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPAV	O.I.	C.G.	H.G.
35.1	99.7	174.8	At3g48520	824011	CYP94B3	member of CYP94B	O.I.	C.G.	H.G.
35.0	99.7	125.7	At1g08920	837413	sugar transporter, putative	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA	O.I.	C.G.	H.G.
34.9	99.7	270.7	At4g27410	828849	RD26 (RESPONSIVE TO DESICCATION 26)	Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.	O.I.	C.G.	H.G.
33.6	99.7	150.9	At1g43160	840915	RAP2.6 (related to AP2 6)	encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily.	O.I.	C.G.	H.G.
33.4	99.7	52.4	At3g06890	819874	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
33.4	99.7	25.8	At5g17450	831611	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	F:metal ion binding;P:metal ion transport;C:unknown;PFBM	O.I.	C.G.	H.G.
33.3	99.7	69.8	At4g23210	828420	protein kinase family protein	Encodes a Cysteine-rich receptor-like kinase (CRK13). Overexpression of CRK13 leads to hypersensitive response cell death, and induces defense against pathogens by causing increased accumulation of salicylic acid.	O.I.	C.G.	H.G.
33.2	99.7	79.9	At3g22160	821780	VQ motif-containing protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMFBV	O.I.	C.G.	H.G.
32.7	99.7	341.6	At4g12490	826861	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:defense response to fungus, lipid transport;C:unknown;PBOMVFA	O.I.	C.G.	H.G.
32.3	99.7	26.3	At1g57560	842131	AtMYB50 (myb domain protein 50)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
32.0	99.7	62.5	At5g46230	834665	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
31.8	99.7	110.3	At1g73800		-	-	O.I.	C.G.	H.G.
31.8	99.7	32.3	At2g04430	814983	atnudt5 (Arabidopsis thaliana Nudix hydrolase homolog 5)	F:hydrolase activity;P:unknown;C:cytosol;BOMPAFV	O.I.	C.G.	H.G.
31.6	99.7	32.2	At4g02360	827767	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
31.3	99.7	96.0	At2g28400	817388	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
31.3	99.7	12.3	At3g12220	820402	scpl16 (serine carboxypeptidase-like 16)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO	O.I.	C.G.	H.G.
31.2	99.7	94.8	At5g39670	833963	calcium-binding EF hand family protein	F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOB	O.I.	C.G.	H.G.
30.8	99.7	85.5	At3g13950	820608	unknown protein	F:molecular_function unknown;P:unknown;C:unknown;P	O.I.	C.G.	H.G.
30.7	99.7	291.0	At2g43510	818952	ATTI1	Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory.	O.I.	C.G.	H.G.
30.6	99.7	41.6	At4g04500	825780	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
30.6	99.7	29.7	At3g13100	820498	ATMRP7	member of MRP subfamily	O.I.	C.G.	H.G.
29.5	99.7	58.0	At4g23150	828414	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
29.5	99.7	22.5	At5g45090	834541	AtPP2-A7 (Phloem protein 2-A7)	F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;P	O.I.	C.G.	H.G.
28.3	99.7	266.0	At2g43570	818959	chitinase, putative	F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMV	O.I.	C.G.	H.G.
28.1	99.7	141.6	At2g45220	819130	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:membrane, plant-type cell wall;PBFOM	O.I.	C.G.	H.G.
28.1	99.7	48.4	At1g53030	841736	cytochrome c oxidase copper chaperone family protein	encodes a copper chaperone, can functional complements the yeast COX17 null mutant. May play a role in the delivery of copper to mitochondria. Expressed in roots and thus may also play a role in copper transport in the roots.	O.I.	C.G.	H.G.
27.9	99.7	20.0	At5g67310	836866	CYP81G1	member of CYP81G	O.I.	C.G.	H.G.
27.7	99.7	303.4	At2g43620	818964	chitinase, putative	F:chitin binding, chitinase activity;P:response to salt stress;C:apoplast;PBFOVM	O.I.	C.G.	H.G.

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GSM ID	GSM142844
Assay name	MG001_ATH1_A25-Torres-8N1
GSE experiment	GSE6176: Impact of Type III effectors on plant defense responses

Microarray experiments to specifically-expressed genes

GSM ID GSM142844 Assay name MG001_ATH1_A25-Torres-8N1 GSE experiment GSE6176: Impact of Type III effectors on plant defense responses

GSM ID GSM142844

Assay name MG001_ATH1_A25-Torres-8N1

GSE experiment GSE6176: Impact of Type III effectors on plant defense responses