Microarray experiments to specifically-expressed genes

GSM ID GSM142738
Assay name DH001_ATH1_A5-BCP2
GSE experiment GSE6162: Transcriptome analysis of Arabidopsis microgametogenesis

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1582.7100.0456.2At5g08030830697glycerophosphoryl diester phosphodiesterase family proteinF:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:endomembrane system;BOPMFAVO.I.C.G.H.G.
1296.4100.0523.0At1g56360842090PAP6 (PURPLE ACID PHOSPHATASE 6)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOMFAO.I.C.G.H.G.
1117.9100.0396.0At5g59810836102SBT5.4F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:unknown;BPOFAMO.I.C.G.H.G.
1073.6100.0157.0At1g79800844319plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PO.I.C.G.H.G.
1058.2100.0236.3At4g10260826617pfkB-type carbohydrate kinase family proteinF:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:cellular_component unknown;BOPAMFO.I.C.G.H.G.
871.7100.0230.6At1g48940841316plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PO.I.C.G.H.G.
852.3100.0571.8At5g17340831600unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
825.1100.0485.4At5g40260834024nodulin MtN3 family proteinF:unknown;P:pollen wall assembly;C:plasma membrane, membrane;PMOBO.I.C.G.H.G.
699.3100.0211.8At1g07340837245ATSTP2 (SUGAR TRANSPORTER 2)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, monosaccharide transmembrane transporter activity;P:pollen development, monosaccharide transport;C:integral to plasma membrane, membrane;FBMPOAO.I.C.G.H.G.
676.3100.0103.6At3g58290824998meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMFO.I.C.G.H.G.
611.2100.0207.6At3g50570824221hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MBOPFVO.I.C.G.H.G.
604.5100.0407.4At4g36350829787PAP25 (PURPLE ACID PHOSPHATASE 25)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cell wall;PBOMFAO.I.C.G.H.G.
573.1100.051.9At1g05040839338unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
569.0100.0180.0At3g51490824312TMT3 (TONOPLAST MONOSACCHARIDE TRANSPORTER3)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, nucleoside transmembrane transporter activity;P:in 6 processes;C:plant-type vacuole membrane, membrane;BFMPOAO.I.C.G.H.G.
556.1100.069.8At3g22360821805AOX1Bencodes an alternative oxidase whose expression is limited to flowers and floral buds.O.I.C.G.H.G.
552.8100.0175.9At4g24890828591PAP24 (PURPLE ACID PHOSPHATASE 24)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cell wall;PBOMFO.I.C.G.H.G.
547.4100.0245.4At5g4004083400160S acidic ribosomal protein P2 (RPP2E)F:structural constituent of ribosome;P:translational elongation;C:cytosolic ribosome, ribosome;MPFOABO.I.C.G.H.G.
542.0100.0142.2At5g59040836021COPT3encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeastO.I.C.G.H.G.
523.3100.099.3At1g75050843843-F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVO.I.C.G.H.G.
507.4100.0106.9At1g26610839201zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPOFVO.I.C.G.H.G.
502.1100.078.3At4g26390828745pyruvate kinase, putativeF:pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity;P:glycolysis;C:cellular_component unknown;BOMPFAO.I.C.G.H.G.
497.4100.090.0At1g61630842459equilibrative nucleoside transporter, putative (ENT7)F:nucleoside transmembrane transporter activity;P:transport;C:plasma membrane;MOPFBO.I.C.G.H.G.
489.5100.057.8At1g05290837025transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;POO.I.C.G.H.G.
460.7100.069.5At3g50580824222unknown proteinF:unknown;P:unknown;C:endomembrane system;MOBPFVAO.I.C.G.H.G.
458.0100.091.2At5g28470832936transporterF:transporter activity;P:oligopeptide transport;C:membrane;PMBFOO.I.C.G.H.G.
454.9100.0130.1At1g36150840520protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;MOFPBVAO.I.C.G.H.G.
438.5100.077.3At5g46795834723MSP2 (microspore-specific promoter 2)F:molecular_function unknown;P:pollen development;C:chloroplast;MPOO.I.C.G.H.G.
414.1100.0226.8At1g24400839057LHT2 (LYSINE HISTIDINE TRANSPORTER 2)High-affinity transporter for neutral and acidic amino acids, expressed in tapetum tissue of anthersO.I.C.G.H.G.
411.1100.0327.2At2g28680817417cupin family proteinF:nutrient reservoir activity;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
399.9100.069.6At5g53510835433ATOPT9 (ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 9)oligopeptide transporterO.I.C.G.H.G.
391.4100.093.4At3g14450820668CID9 (CTC-Interacting Domain 9)RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.O.I.C.G.H.G.
380.4100.0132.0At5g43340834352PHT6phosphate transporterO.I.C.G.H.G.
369.9100.041.4At4g26440828750WRKY34 (WRKY DNA-BINDING PROTEIN 34)member of WRKY Transcription Factor; Group IO.I.C.G.H.G.
354.7100.088.4At1g74990843837zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVO.I.C.G.H.G.
333.1100.0237.1At1g48470841268GLN1Encodes cytosolic glutamine synthase isozyme. Expression of mRNA is not detectable in roots.O.I.C.G.H.G.
328.3100.0104.6At3g18360821365VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
325.9100.0321.7At5g09570830816-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOO.I.C.G.H.G.
325.4100.0161.7At5g0950083080940S ribosomal protein S15 (RPS15C)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;BOPMAFO.I.C.G.H.G.
320.1100.060.6At3g45320823670unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
299.0100.046.7At1g61700842467DNA-directed RNA polymerase II, putative (RPB10)Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10.O.I.C.G.H.G.
294.6100.0423.1At1g71770843507PAB5 (POLY(A)-BINDING PROTEIN 5)Encodes a Class I polyA-binding protein. Expressed in floral organs. Binds polyA sepharose in vitro.O.I.C.G.H.G.
291.4100.095.9At3g55890824755yippee family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
273.8100.060.4At5g03250831894phototropic-responsive NPH3 family proteinF:protein binding, signal transducer activity;P:response to light stimulus;C:cellular_component unknown;PMO.I.C.G.H.G.
273.5100.079.4At5g39910833988glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAO.I.C.G.H.G.
273.5100.054.6At1g78160844152APUM7 (Arabidopsis Pumilio 7)F:RNA binding, binding;P:unknown;C:chloroplast;MFOPO.I.C.G.H.G.
268.6100.0129.0At3g59480825117pfkB-type carbohydrate kinase family proteinF:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:cellular_component unknown;BOPAMFO.I.C.G.H.G.
264.8100.0265.9At5g20710832194BGAL7 (beta-galactosidase 7)F:beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;PMBFOAO.I.C.G.H.G.
263.7100.0116.7At1g09790837508COBL6 (COBRA-LIKE PROTEIN 6 PRECURSOR)F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
254.4100.0437.5At4g08670826433protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;OPMBFVO.I.C.G.H.G.
248.7100.053.0At1g22240838829APUM8 (Arabidopsis Pumilio 8)F:RNA binding, binding;P:unknown;C:unknown;MFOPO.I.C.G.H.G.
241.4100.0172.1At1g63180842622UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3)Encodes a protein with UDP-D-glucose 4-epimerase activity. Involved in pollen development.O.I.C.G.H.G.
237.3100.097.2At5g57810835890TET15 (TETRASPANIN15)Member of TETRASPANIN familyO.I.C.G.H.G.
227.3100.0100.5At1g54560841898XIEmember of Myosin-like proteinsO.I.C.G.H.G.
220.8100.049.2At2g39820818569eukaryotic translation initiation factor 6, putative / eIF-6, putativeF:ribosome binding, translation initiation factor activity;P:translational initiation, mature ribosome assembly;C:cellular_component unknown;AOMFPO.I.C.G.H.G.
218.8100.059.3At5g13600831204phototropic-responsive NPH3 family proteinF:protein binding, signal transducer activity;P:response to light stimulus;C:membrane;PMFO.I.C.G.H.G.
217.9100.0438.2At1g18280838408protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;POBMO.I.C.G.H.G.
217.8100.044.1At2g05160815064zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
216.0100.028.5At1g32250840117calmodulin, putativeF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOBO.I.C.G.H.G.
215.5100.092.8At2g04020814928GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:N-terminal protein myristoylation, lipid metabolic process;C:endomembrane system;PBMO.I.C.G.H.G.
206.4100.088.6At5g03620831777subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
206.3100.067.4At3g60100825180CSY5 (citrate synthase 5)F:citrate (SI)-synthase activity, transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer;P:cellular carbohydrate metabolic process, tricarboxylic acid cycle;C:mitochondrion;BOMFAPO.I.C.G.H.G.
199.7100.023.7At2g03170814846ASK14 (ARABIDOPSIS SKP1-LIKE 14)F:ubiquitin-protein ligase activity, protein binding;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;MPOFVO.I.C.G.H.G.
186.5100.0206.2At1g22760838882PAB3 (POLY(A) BINDING PROTEIN 3)Putative poly(A) binding protein May there fore function in posttranscriptional regulation, including mRNA turnover and translational initiation. Expression detected only in floral organs.O.I.C.G.H.G.
176.4100.072.5At2g29940817544PDR3 (PLEIOTROPIC DRUG RESISTANCE 3)F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMAFPVO.I.C.G.H.G.
176.1100.026.8At3g16580820908F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:vacuole;PO.I.C.G.H.G.
174.6100.0112.6At1g18520838433TET11 (TETRASPANIN11)Member of TETRASPANIN familyO.I.C.G.H.G.
164.4100.031.5At4g35650829717isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putativeF:isocitrate dehydrogenase (NAD+) activity, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;P:tricarboxylic acid cycle, metabolic process;C:mitochondrion;BOFMAPO.I.C.G.H.G.
156.099.936.8At5g15100831362PIN8 (PIN-FORMED 8)F:auxin:hydrogen symporter activity, transporter activity;P:auxin polar transport;C:endomembrane system, integral to membrane;BOPMAO.I.C.G.H.G.
156.099.933.9At5g44980834529F-box family proteinF:unknown;P:unknown;C:cellular_component unknown;PO.I.C.G.H.G.
154.799.9319.0At2g38905818475hydrophobic protein, putative / low temperature and salt responsive protein, putativeF:unknown;P:hyperosmotic salinity response, response to cold;C:endomembrane system, integral to membrane;BFPMOO.I.C.G.H.G.
153.999.938.6At1g54450841887calcium-binding EF-hand family proteinF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MOPO.I.C.G.H.G.
149.199.930.9At4g04080825719ISU3 (ISCU-LIKE 3)Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.O.I.C.G.H.G.
148.099.933.3At2g30630817613unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBO.I.C.G.H.G.
147.999.9114.0At1g25470839133AP2 domain-containing transcription factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.O.I.C.G.H.G.
146.999.922.5At5g6307083642740S ribosomal protein S15, putativeF:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome;BOPMAFO.I.C.G.H.G.
146.599.915.8At3g172603768760transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
146.199.9121.6At1g52570841689PLDALPHA2 (phosphlipase d alpha 2)member of C2-PLD subfamilyO.I.C.G.H.G.
137.799.920.3At5g52490835325fibrillarin, putativeF:RNA binding;P:rRNA processing;C:nucleus;MOFAPBVO.I.C.G.H.G.
135.999.975.2At1g06450837157CCR4-NOT transcription complex protein, putativeF:ribonuclease activity, nucleic acid binding;P:RNA modification;C:nucleus;MPOFO.I.C.G.H.G.
133.499.955.5At2g21510816690DNAJ heat shock N-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
133.499.930.8At3g01020821316ISU2 (ISCU-LIKE 2)Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.O.I.C.G.H.G.
131.999.919.0At3g18720821403F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
131.599.945.1At4g27420828850ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMFAPVO.I.C.G.H.G.
130.399.9389.9At2g07560815329AHA6 (Arabidopsis H(+)-ATPase 6)F:ATPase activity;P:cation transport, metabolic process, ATP biosynthetic process;C:plasma membrane, membrane;BMOFPAVO.I.C.G.H.G.
129.499.997.5At5g5924083604240S ribosomal protein S8 (RPS8B)F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane;MAOFPO.I.C.G.H.G.
125.899.932.7At2g3959081854440S ribosomal protein S15A (RPS15aC)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;BOMAPFO.I.C.G.H.G.
125.099.9109.2At1g63060842609unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
122.799.926.7At3g27440822365uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putativeF:uracil phosphoribosyltransferase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding;P:biosynthetic process, metabolic process;C:cellular_component unknown;BOMPFAVO.I.C.G.H.G.
121.499.931.1At3g21960821754-F:unknown;P:unknown;C:endomembrane system;PO.I.C.G.H.G.
119.399.921.7At4g18180827543glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAO.I.C.G.H.G.
118.499.943.2At1g32780840172alcohol dehydrogenase, putativeF:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:unknown;BOPFMAVO.I.C.G.H.G.
117.999.933.3At4g12930826905unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
116.599.935.3At1g04920839382ATSPS3F (sucrose phosphate synthase 3F)Encodes a protein with putative sucrose-phosphate synthase activity.O.I.C.G.H.G.
116.199.926.6At4g04450825775WRKY42member of WRKY Transcription Factor; Group II-bO.I.C.G.H.G.
114.999.9109.7At3g17630821030ATCHX19 (CATION/H+ EXCHANGER 19)member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
111.399.9232.2At5g09550830814RAB GDP-dissociation inhibitorF:RAB GDP-dissociation inhibitor activity;P:regulation of GTPase activity, protein transport;C:cellular_component unknown;MFOPBO.I.C.G.H.G.
107.899.979.3At4g22960828395unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBO.I.C.G.H.G.
106.499.929.9At4g04760825812sugar transporter family proteinF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOAO.I.C.G.H.G.
103.899.9119.3At4g02140827460unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
103.699.927.3At1g78750844211F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.



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