Microarray experiments to specifically-expressed genes

GSM ID GSM142734
Assay name DH001_ATH1_A1-UNM1
GSE experiment GSE6162: Transcriptome analysis of Arabidopsis microgametogenesis

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1803.4100.0259.3At5g59040836021COPT3encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeastO.I.C.G.H.G.
1577.1100.0310.2At1g48940841316plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PO.I.C.G.H.G.
1459.4100.0152.2At3g58290824998meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMFO.I.C.G.H.G.
1239.1100.0142.1At1g61630842459equilibrative nucleoside transporter, putative (ENT7)F:nucleoside transmembrane transporter activity;P:transport;C:plasma membrane;MOPFBO.I.C.G.H.G.
1225.1100.0213.4At1g36150840520protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;MOFPBVAO.I.C.G.H.G.
1120.6100.0116.5At5g53510835433ATOPT9 (ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 9)oligopeptide transporterO.I.C.G.H.G.
1053.5100.0259.9At1g07340837245ATSTP2 (SUGAR TRANSPORTER 2)F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, monosaccharide transmembrane transporter activity;P:pollen development, monosaccharide transport;C:integral to plasma membrane, membrane;FBMPOAO.I.C.G.H.G.
1017.4100.0365.7At5g08030830697glycerophosphoryl diester phosphodiesterase family proteinF:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:endomembrane system;BOPMFAVO.I.C.G.H.G.
998.7100.0459.1At1g56360842090PAP6 (PURPLE ACID PHOSPHATASE 6)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBOMFAO.I.C.G.H.G.
977.7100.0227.1At4g10260826617pfkB-type carbohydrate kinase family proteinF:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:cellular_component unknown;BOPAMFO.I.C.G.H.G.
889.5100.0223.1At4g24890828591PAP24 (PURPLE ACID PHOSPHATASE 24)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cell wall;PBOMFO.I.C.G.H.G.
871.0100.0125.8At5g28470832936transporterF:transporter activity;P:oligopeptide transport;C:membrane;PMBFOO.I.C.G.H.G.
869.1100.0232.1At3g59480825117pfkB-type carbohydrate kinase family proteinF:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:cellular_component unknown;BOPAMFO.I.C.G.H.G.
859.7100.049.3At2g03170814846ASK14 (ARABIDOPSIS SKP1-LIKE 14)F:ubiquitin-protein ligase activity, protein binding;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;MPOFVO.I.C.G.H.G.
756.1100.0186.2At5g43340834352PHT6phosphate transporterO.I.C.G.H.G.
743.4100.059.1At1g05040839338unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
740.6100.0130.4At1g79800844319plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PO.I.C.G.H.G.
740.2100.0285.3At5g4004083400160S acidic ribosomal protein P2 (RPP2E)F:structural constituent of ribosome;P:translational elongation;C:cytosolic ribosome, ribosome;MPFOABO.I.C.G.H.G.
731.0100.0320.2At5g59810836102SBT5.4F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:unknown;BPOFAMO.I.C.G.H.G.
728.3100.0226.6At3g50570824221hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MBOPFVO.I.C.G.H.G.
716.6100.0126.4At3g14450820668CID9 (CTC-Interacting Domain 9)RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.O.I.C.G.H.G.
696.1100.087.3At2g39820818569eukaryotic translation initiation factor 6, putative / eIF-6, putativeF:ribosome binding, translation initiation factor activity;P:translational initiation, mature ribosome assembly;C:cellular_component unknown;AOMFPO.I.C.G.H.G.
594.9100.0117.1At5g39910833988glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAO.I.C.G.H.G.
542.4100.0393.5At5g40260834024nodulin MtN3 family proteinF:unknown;P:pollen wall assembly;C:plasma membrane, membrane;PMOBO.I.C.G.H.G.
538.1100.0100.7At1g75050843843-F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOVO.I.C.G.H.G.
525.0100.074.2At3g50580824222unknown proteinF:unknown;P:unknown;C:endomembrane system;MOBPFVAO.I.C.G.H.G.
507.8100.069.2At4g12930826905unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
493.5100.064.7At2g3959081854440S ribosomal protein S15A (RPS15aC)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;BOMAPFO.I.C.G.H.G.
493.3100.0199.0At5g0950083080940S ribosomal protein S15 (RPS15C)F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;BOPMAFO.I.C.G.H.G.
491.4100.060.2At5g44980834529F-box family proteinF:unknown;P:unknown;C:cellular_component unknown;PO.I.C.G.H.G.
460.8100.0420.4At5g17340831600unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
454.9100.0353.4At4g36350829787PAP25 (PURPLE ACID PHOSPHATASE 25)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cell wall;PBOMFAO.I.C.G.H.G.
452.6100.045.8At4g26440828750WRKY34 (WRKY DNA-BINDING PROTEIN 34)member of WRKY Transcription Factor; Group IO.I.C.G.H.G.
420.2100.096.2At1g74990843837zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFVO.I.C.G.H.G.
415.6100.0114.6At3g55890824755yippee family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
389.8100.0169.2At5g5924083604240S ribosomal protein S8 (RPS8B)F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane;MAOFPO.I.C.G.H.G.
384.2100.053.0At1g61700842467DNA-directed RNA polymerase II, putative (RPB10)Protein of unknown function that is homologous to the At1g11475 locus that encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V. Homologous to budding yeast RPB10.O.I.C.G.H.G.
374.0100.0312.0At2g28680817417cupin family proteinF:nutrient reservoir activity;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
366.4100.038.7At3g16580820908F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:vacuole;PO.I.C.G.H.G.
365.3100.066.8At4g26390828745pyruvate kinase, putativeF:pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity;P:glycolysis;C:cellular_component unknown;BOMPFAO.I.C.G.H.G.
364.9100.025.7At1g212903766772transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
357.2100.056.5At2g05160815064zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing proteinF:RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PMOO.I.C.G.H.G.
356.0100.047.7At4g04080825719ISU3 (ISCU-LIKE 3)Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.O.I.C.G.H.G.
331.5100.044.7At4g35650829717isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putativeF:isocitrate dehydrogenase (NAD+) activity, oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;P:tricarboxylic acid cycle, metabolic process;C:mitochondrion;BOFMAPO.I.C.G.H.G.
328.3100.047.3At1g05290837025transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;POO.I.C.G.H.G.
317.2100.052.7At3g51190824282structural constituent of ribosomeF:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome;BOPMAFO.I.C.G.H.G.
316.6100.072.7At5g27940832861WPP3 (WPP domain protein 3)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
307.3100.046.7At3g01020821316ISU2 (ISCU-LIKE 2)Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.O.I.C.G.H.G.
301.1100.057.3At1g78160844152APUM7 (Arabidopsis Pumilio 7)F:RNA binding, binding;P:unknown;C:chloroplast;MFOPO.I.C.G.H.G.
298.8100.063.8At5g46795834723MSP2 (microspore-specific promoter 2)F:molecular_function unknown;P:pollen development;C:chloroplast;MPOO.I.C.G.H.G.
291.8100.057.9At3g45320823670unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
250.3100.0281.9At5g09570830816-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOO.I.C.G.H.G.
250.1100.032.3At5g61940836315ubiquitin carboxyl-terminal hydrolase-relatedF:ubiquitin thiolesterase activity, zinc ion binding;P:ubiquitin-dependent protein catabolic process;C:intracellular;OPMFBO.I.C.G.H.G.
241.8100.020.4At3g172603768760transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
239.9100.078.0At4g28580828976magnesium transporter CorA-like family protein (MRS2-6)F:metal ion transmembrane transporter activity;P:metal ion transport;C:membrane;PFOMBO.I.C.G.H.G.
231.7100.083.1At2g29940817544PDR3 (PLEIOTROPIC DRUG RESISTANCE 3)F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:membrane;BOMAFPVO.I.C.G.H.G.
230.5100.098.0At1g06450837157CCR4-NOT transcription complex protein, putativeF:ribonuclease activity, nucleic acid binding;P:RNA modification;C:nucleus;MPOFO.I.C.G.H.G.
222.8100.070.8At1g26610839201zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPOFVO.I.C.G.H.G.
220.3100.0126.4At1g18520838433TET11 (TETRASPANIN11)Member of TETRASPANIN familyO.I.C.G.H.G.
205.9100.023.7At3g18720821403F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
204.6100.057.3At5g13600831204phototropic-responsive NPH3 family proteinF:protein binding, signal transducer activity;P:response to light stimulus;C:membrane;PMFO.I.C.G.H.G.
199.5100.076.7At1g60570842352kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMVBOAFO.I.C.G.H.G.
191.0100.023.9At5g52490835325fibrillarin, putativeF:RNA binding;P:rRNA processing;C:nucleus;MOFAPBVO.I.C.G.H.G.
177.4100.0217.6At5g20710832194BGAL7 (beta-galactosidase 7)F:beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;PMBFOAO.I.C.G.H.G.
172.5100.0156.6At2g45750819183dehydration-responsive family proteinF:unknown;P:biological_process unknown;C:unknown;PBOO.I.C.G.H.G.
168.9100.034.8At1g78750844211F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G.
165.3100.0352.7At4g08670826433protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;OPMBFVO.I.C.G.H.G.
163.199.932.5At4g24950828597unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
160.299.938.5At3g15740820817zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFBVO.I.C.G.H.G.
159.699.949.7At4g27420828850ABC transporter family proteinF:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMFAPVO.I.C.G.H.G.
149.799.926.7At4g20100827756PQ-loop repeat family protein / transmembrane family proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;FMPOO.I.C.G.H.G.
149.499.9362.8At1g18280838408protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;POBMO.I.C.G.H.G.
145.699.946.8At4g00390828200transcription regulatorF:transcription regulator activity;P:unknown;C:nucleolus;OMBFPVAO.I.C.G.H.G.
143.499.956.2At3g60100825180CSY5 (citrate synthase 5)F:citrate (SI)-synthase activity, transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer;P:cellular carbohydrate metabolic process, tricarboxylic acid cycle;C:mitochondrion;BOMFAPO.I.C.G.H.G.
142.399.946.0At5g52330835309meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PFMOO.I.C.G.H.G.
137.899.967.8At3g18360821365VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
137.399.929.9At4g05230825871ubiquitin family proteinF:molecular_function unknown;P:protein modification process;C:cellular_component unknown;MPFOVO.I.C.G.H.G.
136.999.928.7At4g30050829128unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
136.899.9123.6At2g3222081778160S ribosomal protein L27 (RPL27A)F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome, intracellular, membrane;MOFPO.I.C.G.H.G.
136.699.942.7At5g03250831894phototropic-responsive NPH3 family proteinF:protein binding, signal transducer activity;P:response to light stimulus;C:cellular_component unknown;PMO.I.C.G.H.G.
136.099.952.1At3g56730824840unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
132.099.911.7At1g05577837062unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
130.999.939.6At5g09630830822protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MFOPO.I.C.G.H.G.
130.599.972.6At1g53650841802CID8 (CTC-INTERACTING DOMAIN 8)RNA-binding protein, putative, similar to RNA-binding protein GB:AAA86641 GI:1174153 from (Arabidopsis thaliana).Contains PAB2 domain which facilitates binding to PABC proteins.O.I.C.G.H.G.
129.799.937.1At2g30940817645protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVAO.I.C.G.H.G.
125.299.971.3At1g03710839427-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBO.I.C.G.H.G.
124.199.932.9At5g15100831362PIN8 (PIN-FORMED 8)F:auxin:hydrogen symporter activity, transporter activity;P:auxin polar transport;C:endomembrane system, integral to membrane;BOPMAO.I.C.G.H.G.
122.599.997.7At3g27930822417unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PO.I.C.G.H.G.
122.499.937.1At1g22240838829APUM8 (Arabidopsis Pumilio 8)F:RNA binding, binding;P:unknown;C:unknown;MFOPO.I.C.G.H.G.
120.599.983.8At4g22960828395unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPBO.I.C.G.H.G.
120.199.950.9At3g07130819899PAP15 (PURPLE ACID PHOSPHATASE 15)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;BPOMFAO.I.C.G.H.G.
117.799.913.1At4g13985827034FBD1 (FBD-ASSOCIATED F-BOX PROTEIN)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
117.499.9120.0At1g63180842622UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3)Encodes a protein with UDP-D-glucose 4-epimerase activity. Involved in pollen development.O.I.C.G.H.G.
117.199.926.1At3g27440822365uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putativeF:uracil phosphoribosyltransferase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding;P:biosynthetic process, metabolic process;C:cellular_component unknown;BOMPFAVO.I.C.G.H.G.
115.699.9135.4At2g46880819301PAP14 (PURPLE ACID PHOSPHATASE 14)F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPOO.I.C.G.H.G.
113.499.948.1At4g39753830132kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMBOAVFO.I.C.G.H.G.
113.399.931.2At1g73700843705MATE efflux family proteinF:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
112.899.917.8At5g52620835339F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
112.599.972.4At4g28700828988AMT1F:high affinity secondary active ammonium transmembrane transporter activity, ammonium transmembrane transporter activity;P:transport;C:plasma membrane, membrane;OBMFPAO.I.C.G.H.G.
111.799.916.0At1g55030841945F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFO.I.C.G.H.G.



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