CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM142634

Assay name MC002_ATH1_A4.3-dubos-6kc

GSE experiment GSE6151: The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
276.0 100.0 35.5 At5g19040 832023 IPT5 Encodes cytokinin synthase. O.I. C.G. H.G.
258.7 100.0 83.0 At5g23810 832446 AAP7 Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies. O.I. C.G. H.G.
257.0 100.0 50.0 At5g06510 830539 NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10) F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:CCAAT-binding factor complex, nucleus;PMFO O.I. C.G. H.G.
251.6 100.0 71.1 At4g20370 827785 TSF (TWIN SISTER OF FT) Encodes a floral inducer that is a homolog of FT. Plants overexpressing this gene flower earlier than Col. Loss-of-function mutations flower later in short days. TSF and FT play overlapping roles in the promotion of flowering, with FT playing the dominant role.TSF sequences show extensive variation in different accessions and may contribute to quantitative variation in flowering time in these accessions. TSF has a complex pattern of spatial expression; it is expressed mainly in phloem and expression is regulated by daylength and vernalization. O.I. C.G. H.G.
244.9 100.0 231.4 At4g10380 826630 NIP5 Essential for efficient Boron uptake and plant development under boron limitation. Also functions in arsenite transport and tolerance. O.I. C.G. H.G.
241.1 100.0 211.1 At3g62960 825471 glutaredoxin family protein F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFBO O.I. C.G. H.G.
216.7 100.0 43.6 At1g48500 841271 JAZ4 (JASMONATE-ZIM-DOMAIN PROTEIN 4) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
183.2 100.0 140.5 At5g11930 831066 glutaredoxin family protein F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:unknown;PMBO O.I. C.G. H.G.
175.1 100.0 162.9 At5g60450 836166 ARF4 (AUXIN RESPONSE FACTOR 4) Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity. O.I. C.G. H.G.
168.0 100.0 87.5 At5g63580 836477 FLS2 (FLAVONOL SYNTHASE 2) encodes a protein whose sequence is similar to flavonol synthase O.I. C.G. H.G.
157.8 99.9 94.6 At1g21890 838791 nodulin MtN21 family protein F:unknown;P:unknown;C:membrane;BPOAM O.I. C.G. H.G.
148.5 99.9 72.7 At1g78815 844218 LSH7 (LIGHT SENSITIVE HYPOCOTYLS 7) F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PM O.I. C.G. H.G.
148.2 99.9 52.9 At1g23380 838946 KNAT6 homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants. O.I. C.G. H.G.
145.6 99.9 33.9 At3g27650 822387 LBD25 (LOB DOMAIN-CONTAINING PROTEIN 25) F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
139.2 99.9 101.7 At3g28360 822465 PGP16 (P-GLYCOPROTEIN 16) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPV O.I. C.G. H.G.
136.8 99.9 132.5 At1g34040 840301 alliinase family protein F:pyridoxal phosphate binding, carbon-sulfur lyase activity, catalytic activity;P:biological_process unknown;C:endomembrane system;PBOAF O.I. C.G. H.G.
135.9 99.9 124.9 At4g01390 828075 - F:molecular_function unknown;P:biological_process unknown;C:unknown;PO O.I. C.G. H.G.
125.1 99.9 268.7 At5g65040 836628 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
115.7 99.9 202.3 At2g04795 815023 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:unknown;P O.I. C.G. H.G.
111.9 99.9 186.3 At3g05690 819738 NF-YA2 (NUCLEAR FACTOR Y, SUBUNIT A2) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. O.I. C.G. H.G.
109.7 99.9 160.4 At3g59010 825070 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
102.2 99.9 96.2 At5g18840 832002 sugar transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOA O.I. C.G. H.G.
100.4 99.9 129.0 At3g21250 821679 ATMRP6 member of MRP subfamily O.I. C.G. H.G.
98.8 99.9 262.1 At1g12200 837773 flavin-containing monooxygenase family protein / FMO family protein F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
95.6 99.9 68.2 At4g01440 826697 nodulin MtN21 family protein F:unknown;P:unknown;C:endomembrane system, membrane;BPOAM O.I. C.G. H.G.
92.1 99.9 107.7 At1g01070 839550 nodulin MtN21 family protein F:unknown;P:unknown;C:membrane;BPOAFM O.I. C.G. H.G.
91.3 99.9 31.1 At4g38340 829991 RWP-RK domain-containing protein F:transcription factor activity;P:regulation of transcription;C:unknown;POFB O.I. C.G. H.G.
87.4 99.9 29.0 At1g59670 842257 ATGSTU15 (GLUTATHIONE S-TRANSFERASE TAU 15) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
86.7 99.9 71.6 At1g73040 843635 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMO O.I. C.G. H.G.
84.3 99.9 62.8 At2g20550 816577 DNAJ chaperone C-terminal domain-containing protein F:unfolded protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
82.2 99.9 67.5 At3g15510 820790 ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2) Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2. O.I. C.G. H.G.
80.1 99.9 107.9 At1g24575 839072 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
79.2 99.9 109.3 At4g14465 827093 DNA-binding protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBM O.I. C.G. H.G.
78.9 99.9 27.6 At5g35450 833508 disease resistance protein (CC-NBS-LRR class), putative F:ATP binding;P:defense response, apoptosis;C:plasma membrane;PBMOFA O.I. C.G. H.G.
77.9 99.9 83.6 At5g66180 836750 - F:unknown;P:unknown;C:cellular_component unknown;BOMAFP O.I. C.G. H.G.
77.7 99.9 29.1 At1g69970 843334 CLE26 (CLAVATA3/ESR-RELATED 26) Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can not replace CLV3 function in vivo. O.I. C.G. H.G.
76.8 99.9 134.8 At4g18120 827537 AML3 (ARABIDOPSIS MEI2-LIKE 3) A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML3 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML3 is the transcript with highest frequency of alternative splicing. Expression was detected during early embryo development (heart and torpedo stage); no accumulation was detected in vegetative and floral apices, as revealed by in situ hybridization. O.I. C.G. H.G.
74.8 99.9 52.6 At5g28490 832941 LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1) Encodes a nuclear protein that mediates light regulation of seedling development in a phytochrome-dependent manner. O.I. C.G. H.G.
74.1 99.9 108.0 At2g04800 815024 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P O.I. C.G. H.G.
70.4 99.9 191.4 At1g22160 838821 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
69.7 99.9 119.0 At1g62360 842534 STM (SHOOT MERISTEMLESS) Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia. O.I. C.G. H.G.
69.4 99.9 136.0 At4g29100 829031 ethylene-responsive family protein F:transcription factor activity;P:regulation of transcription;C:nucleus;OPMF O.I. C.G. H.G.
68.0 99.9 16.6 At5g66630 836795 DAR5 (DA1-RELATED PROTEIN 5) F:zinc ion binding;P:unknown;C:unknown;PMOBF O.I. C.G. H.G.
65.4 99.8 85.8 At2g14210 815907 AGL44 (AGAMOUS-LIKE 44) MADS box gene, transcription factor O.I. C.G. H.G.
65.1 99.8 33.8 At3g04510 819607 LSH2 (LIGHT SENSITIVE HYPOCOTYLS 2) F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PM O.I. C.G. H.G.
64.2 99.8 16.7 At3g43930 823509 - F:molecular_function unknown;P:biological_process unknown;C:intracellular;MFPO O.I. C.G. H.G.
63.5 99.8 47.3 At4g22790 828378 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
62.8 99.8 43.9 At5g59530 836072 2-oxoglutarate-dependent dioxygenase, putative F:transferase activity, transferring glycosyl groups;P:unknown;C:unknown;POBFM O.I. C.G. H.G.
61.2 99.8 63.0 At2g36970 818271 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMBVOF O.I. C.G. H.G.
60.9 99.8 33.5 At4g34560 829608 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
60.6 99.8 26.8 At5g66350 836767 SHI (SHORT INTERNODES) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid. O.I. C.G. H.G.
60.3 99.8 27.7 At1g70510 843388 KNAT2 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA 2) A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems. O.I. C.G. H.G.
59.1 99.8 129.3 At5g40960 834098 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
58.0 99.8 197.5 At2g35940 818167 BLH1 (BEL1-LIKE HOMEODOMAIN 1) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm. O.I. C.G. H.G.
57.1 99.8 66.6 At4g14580 827106 CIPK4 (CBL-interacting protein kinase 4) CBL-interacting protein kinase O.I. C.G. H.G.
57.1 99.8 40.0 At3g13810 820593 AtIDD11 (Arabidopsis thaliana Indeterminate(ID)-Domain 11) F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MOPFB O.I. C.G. H.G.
57.1 99.8 15.0 At3g01990 821217 ACR6 Member of a small family of ACT domain containing proteins in Arabidopsis. ACT domains are involved in amino acid binding. O.I. C.G. H.G.
56.4 99.8 56.0 At1g12940 837852 ATNRT2.5 (nitrate transporter2.5) member of High affinity nitrate transporter family O.I. C.G. H.G.
56.4 99.8 42.4 At4g35240 829677 unknown protein F:unknown;P:N-terminal protein myristoylation;C:plasma membrane;PMFOBV O.I. C.G. H.G.
55.5 99.8 79.5 At1g10480 837588 ZFP5 (ZINC FINGER PROTEIN 5) Encodes a zinc finger protein containing only a single zinc finger. O.I. C.G. H.G.
55.1 99.8 184.2 At5g49630 835025 AAP6 (AMINO ACID PERMEASE 6) Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem. O.I. C.G. H.G.
55.0 99.8 153.5 At2g18050 816317 HIS1-3 (HISTONE H1-3) encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA. O.I. C.G. H.G.
55.0 99.8 61.1 At5g63710 836491 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVA O.I. C.G. H.G.
54.3 99.8 46.9 At1g36070 840511 WD-40 repeat family protein F:molecular_function unknown;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex;MBFOPA O.I. C.G. H.G.
53.5 99.8 67.5 At3g61880 825361 CYP78A9 (CYTOCHROME P450 78A9) Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis. O.I. C.G. H.G.
52.8 99.8 26.0 At1g30160 839896 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
52.6 99.8 46.3 At3g57540 824921 remorin family protein F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
51.8 99.8 46.9 At4g16000 827284 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
51.2 99.8 55.4 At5g53890 835470 leucine-rich repeat transmembrane protein kinase, putative Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of phytosulfokine (PSK), which is a 5-aa tyrosine-sulfated peptide that primarily promotes cellular proliferation. O.I. C.G. H.G.
51.1 99.8 76.0 At3g62150 825388 PGP21 (P-GLYCOPROTEIN 21) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV O.I. C.G. H.G.
50.0 99.8 107.9 At4g33040 829441 glutaredoxin family protein F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:cellular_component unknown;PMFOB O.I. C.G. H.G.
49.8 99.8 40.7 At3g11100 820281 transcription factor F:transcription factor activity;P:regulation of transcription;C:nucleus;POMFBA O.I. C.G. H.G.
49.3 99.8 112.2 At4g00880 827989 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO O.I. C.G. H.G.
49.0 99.8 50.3 At4g17880 827511 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOVB O.I. C.G. H.G.
48.6 99.8 20.2 At1g21220 3766770 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
48.3 99.8 93.6 At3g07360 819924 PUB9 (PLANT U-BOX 9) Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. O.I. C.G. H.G.
47.6 99.8 57.5 At4g19230 827663 CYP707A1 Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy. O.I. C.G. H.G.
47.3 99.8 157.7 At4g12280 826837 copper amine oxidase family protein F:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:cellular_component unknown;FBMOPA O.I. C.G. H.G.
47.2 99.8 29.8 At5g16200 831478 50S ribosomal protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
46.9 99.8 62.8 At2g33860 817956 ETT (ETTIN) ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF. O.I. C.G. H.G.
46.8 99.8 86.7 At3g06130 819786 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cell wall;MBOPFVA O.I. C.G. H.G.
46.7 99.8 56.8 At3g63110 825486 ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3) Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast. O.I. C.G. H.G.
46.6 99.8 236.7 At1g27030 839592 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOP O.I. C.G. H.G.
46.3 99.8 111.2 At5g16570 831519 GLN1 Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium O.I. C.G. H.G.
46.3 99.8 21.7 At4g25760 828681 AtGDU2 (Arabidopsis thaliana GLUTAMINE DUMPER 2) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
46.2 99.8 97.0 At3g49360 824098 glucosamine/galactosamine-6-phosphate isomerase family protein F:6-phosphogluconolactonase activity, catalytic activity;P:pentose-phosphate shunt, carbohydrate metabolic process;C:plasma membrane;BOFMP O.I. C.G. H.G.
46.2 99.8 35.2 At2g43660 818968 glycosyl hydrolase family protein 17 F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
46.0 99.8 43.3 At4g00940 827952 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;POM O.I. C.G. H.G.
45.8 99.8 235.2 At2g19810 816500 zinc finger (CCCH-type) family protein F:transcription factor activity, nucleic acid binding;P:regulation of transcription;C:unknown;POM O.I. C.G. H.G.
45.6 99.8 63.7 At4g39210 830076 APL3 Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots. O.I. C.G. H.G.
45.6 99.8 47.6 At1g17590 838335 NF-YA8 (NUCLEAR FACTOR Y, SUBUNIT A8) F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:CCAAT-binding factor complex, nucleus, chloroplast;PMFOB O.I. C.G. H.G.
45.5 99.8 26.0 At1g07300 837241 josephin protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
45.4 99.8 36.5 At3g21600 821714 senescence/dehydration-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;PMF O.I. C.G. H.G.
44.9 99.8 61.0 At1g15410 838111 aspartate-glutamate racemase family F:racemase and epimerase activity, acting on amino acids and derivatives;P:amino acid metabolic process, metabolic process;C:chloroplast;BOAPF O.I. C.G. H.G.
44.9 99.8 25.1 At2g40130 818604 heat shock protein-related F:unknown;P:biological_process unknown;C:unknown;PB O.I. C.G. H.G.
44.8 99.8 96.5 At5g49660 835028 leucine-rich repeat transmembrane protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
44.5 99.8 190.2 At4g19420 827683 pectinacetylesterase family protein F:carboxylesterase activity;P:biological_process unknown;C:endomembrane system;PMOBA O.I. C.G. H.G.
44.2 99.8 164.4 At5g25770 832646 unknown protein F:unknown;P:biological_process unknown;C:unknown;BOAFP O.I. C.G. H.G.
43.9 99.8 114.3 At1g77920 844127 bZIP family transcription factor F:transcription factor activity, calmodulin binding;P:defense response to bacterium;C:nucleus;POFMB O.I. C.G. H.G.
43.4 99.8 186.3 At2g42610 818861 LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
276.0	100.0	35.5	At5g19040	832023	IPT5	Encodes cytokinin synthase.	O.I.	C.G.	H.G.
258.7	100.0	83.0	At5g23810	832446	AAP7	Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.	O.I.	C.G.	H.G.
257.0	100.0	50.0	At5g06510	830539	NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10)	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:CCAAT-binding factor complex, nucleus;PMFO	O.I.	C.G.	H.G.
251.6	100.0	71.1	At4g20370	827785	TSF (TWIN SISTER OF FT)	Encodes a floral inducer that is a homolog of FT. Plants overexpressing this gene flower earlier than Col. Loss-of-function mutations flower later in short days. TSF and FT play overlapping roles in the promotion of flowering, with FT playing the dominant role.TSF sequences show extensive variation in different accessions and may contribute to quantitative variation in flowering time in these accessions. TSF has a complex pattern of spatial expression; it is expressed mainly in phloem and expression is regulated by daylength and vernalization.	O.I.	C.G.	H.G.
244.9	100.0	231.4	At4g10380	826630	NIP5	Essential for efficient Boron uptake and plant development under boron limitation. Also functions in arsenite transport and tolerance.	O.I.	C.G.	H.G.
241.1	100.0	211.1	At3g62960	825471	glutaredoxin family protein	F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFBO	O.I.	C.G.	H.G.
216.7	100.0	43.6	At1g48500	841271	JAZ4 (JASMONATE-ZIM-DOMAIN PROTEIN 4)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
183.2	100.0	140.5	At5g11930	831066	glutaredoxin family protein	F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:unknown;PMBO	O.I.	C.G.	H.G.
175.1	100.0	162.9	At5g60450	836166	ARF4 (AUXIN RESPONSE FACTOR 4)	Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity.	O.I.	C.G.	H.G.
168.0	100.0	87.5	At5g63580	836477	FLS2 (FLAVONOL SYNTHASE 2)	encodes a protein whose sequence is similar to flavonol synthase	O.I.	C.G.	H.G.
157.8	99.9	94.6	At1g21890	838791	nodulin MtN21 family protein	F:unknown;P:unknown;C:membrane;BPOAM	O.I.	C.G.	H.G.
148.5	99.9	72.7	At1g78815	844218	LSH7 (LIGHT SENSITIVE HYPOCOTYLS 7)	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PM	O.I.	C.G.	H.G.
148.2	99.9	52.9	At1g23380	838946	KNAT6	homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants.	O.I.	C.G.	H.G.
145.6	99.9	33.9	At3g27650	822387	LBD25 (LOB DOMAIN-CONTAINING PROTEIN 25)	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
139.2	99.9	101.7	At3g28360	822465	PGP16 (P-GLYCOPROTEIN 16)	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPV	O.I.	C.G.	H.G.
136.8	99.9	132.5	At1g34040	840301	alliinase family protein	F:pyridoxal phosphate binding, carbon-sulfur lyase activity, catalytic activity;P:biological_process unknown;C:endomembrane system;PBOAF	O.I.	C.G.	H.G.
135.9	99.9	124.9	At4g01390	828075	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;PO	O.I.	C.G.	H.G.
125.1	99.9	268.7	At5g65040	836628	senescence-associated protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
115.7	99.9	202.3	At2g04795	815023	unknown protein	F:molecular_function unknown;P:response to oxidative stress;C:unknown;P	O.I.	C.G.	H.G.
111.9	99.9	186.3	At3g05690	819738	NF-YA2 (NUCLEAR FACTOR Y, SUBUNIT A2)	Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.	O.I.	C.G.	H.G.
109.7	99.9	160.4	At3g59010	825070	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
102.2	99.9	96.2	At5g18840	832002	sugar transporter, putative	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOA	O.I.	C.G.	H.G.
100.4	99.9	129.0	At3g21250	821679	ATMRP6	member of MRP subfamily	O.I.	C.G.	H.G.
98.8	99.9	262.1	At1g12200	837773	flavin-containing monooxygenase family protein / FMO family protein	F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
95.6	99.9	68.2	At4g01440	826697	nodulin MtN21 family protein	F:unknown;P:unknown;C:endomembrane system, membrane;BPOAM	O.I.	C.G.	H.G.
92.1	99.9	107.7	At1g01070	839550	nodulin MtN21 family protein	F:unknown;P:unknown;C:membrane;BPOAFM	O.I.	C.G.	H.G.
91.3	99.9	31.1	At4g38340	829991	RWP-RK domain-containing protein	F:transcription factor activity;P:regulation of transcription;C:unknown;POFB	O.I.	C.G.	H.G.
87.4	99.9	29.0	At1g59670	842257	ATGSTU15 (GLUTATHIONE S-TRANSFERASE TAU 15)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
86.7	99.9	71.6	At1g73040	843635	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMO	O.I.	C.G.	H.G.
84.3	99.9	62.8	At2g20550	816577	DNAJ chaperone C-terminal domain-containing protein	F:unfolded protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
82.2	99.9	67.5	At3g15510	820790	ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2)	Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.	O.I.	C.G.	H.G.
80.1	99.9	107.9	At1g24575	839072	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
79.2	99.9	109.3	At4g14465	827093	DNA-binding protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBM	O.I.	C.G.	H.G.
78.9	99.9	27.6	At5g35450	833508	disease resistance protein (CC-NBS-LRR class), putative	F:ATP binding;P:defense response, apoptosis;C:plasma membrane;PBMOFA	O.I.	C.G.	H.G.
77.9	99.9	83.6	At5g66180	836750	-	F:unknown;P:unknown;C:cellular_component unknown;BOMAFP	O.I.	C.G.	H.G.
77.7	99.9	29.1	At1g69970	843334	CLE26 (CLAVATA3/ESR-RELATED 26)	Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can not replace CLV3 function in vivo.	O.I.	C.G.	H.G.
76.8	99.9	134.8	At4g18120	827537	AML3 (ARABIDOPSIS MEI2-LIKE 3)	A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML3 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML3 is the transcript with highest frequency of alternative splicing. Expression was detected during early embryo development (heart and torpedo stage); no accumulation was detected in vegetative and floral apices, as revealed by in situ hybridization.	O.I.	C.G.	H.G.
74.8	99.9	52.6	At5g28490	832941	LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)	Encodes a nuclear protein that mediates light regulation of seedling development in a phytochrome-dependent manner.	O.I.	C.G.	H.G.
74.1	99.9	108.0	At2g04800	815024	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P	O.I.	C.G.	H.G.
70.4	99.9	191.4	At1g22160	838821	senescence-associated protein-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
69.7	99.9	119.0	At1g62360	842534	STM (SHOOT MERISTEMLESS)	Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia.	O.I.	C.G.	H.G.
69.4	99.9	136.0	At4g29100	829031	ethylene-responsive family protein	F:transcription factor activity;P:regulation of transcription;C:nucleus;OPMF	O.I.	C.G.	H.G.
68.0	99.9	16.6	At5g66630	836795	DAR5 (DA1-RELATED PROTEIN 5)	F:zinc ion binding;P:unknown;C:unknown;PMOBF	O.I.	C.G.	H.G.
65.4	99.8	85.8	At2g14210	815907	AGL44 (AGAMOUS-LIKE 44)	MADS box gene, transcription factor	O.I.	C.G.	H.G.
65.1	99.8	33.8	At3g04510	819607	LSH2 (LIGHT SENSITIVE HYPOCOTYLS 2)	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PM	O.I.	C.G.	H.G.
64.2	99.8	16.7	At3g43930	823509	-	F:molecular_function unknown;P:biological_process unknown;C:intracellular;MFPO	O.I.	C.G.	H.G.
63.5	99.8	47.3	At4g22790	828378	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
62.8	99.8	43.9	At5g59530	836072	2-oxoglutarate-dependent dioxygenase, putative	F:transferase activity, transferring glycosyl groups;P:unknown;C:unknown;POBFM	O.I.	C.G.	H.G.
61.2	99.8	63.0	At2g36970	818271	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMBVOF	O.I.	C.G.	H.G.
60.9	99.8	33.5	At4g34560	829608	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
60.6	99.8	26.8	At5g66350	836767	SHI (SHORT INTERNODES)	A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Shi mutant is dominant, has dwarf phenotype. Loss of function mutations have no observable phenotype. Putative zinc finger protein. Involved in the response to gibberellic acid.	O.I.	C.G.	H.G.
60.3	99.8	27.7	At1g70510	843388	KNAT2 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA 2)	A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems.	O.I.	C.G.	H.G.
59.1	99.8	129.3	At5g40960	834098	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
58.0	99.8	197.5	At2g35940	818167	BLH1 (BEL1-LIKE HOMEODOMAIN 1)	Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.	O.I.	C.G.	H.G.
57.1	99.8	66.6	At4g14580	827106	CIPK4 (CBL-interacting protein kinase 4)	CBL-interacting protein kinase	O.I.	C.G.	H.G.
57.1	99.8	40.0	At3g13810	820593	AtIDD11 (Arabidopsis thaliana Indeterminate(ID)-Domain 11)	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MOPFB	O.I.	C.G.	H.G.
57.1	99.8	15.0	At3g01990	821217	ACR6	Member of a small family of ACT domain containing proteins in Arabidopsis. ACT domains are involved in amino acid binding.	O.I.	C.G.	H.G.
56.4	99.8	56.0	At1g12940	837852	ATNRT2.5 (nitrate transporter2.5)	member of High affinity nitrate transporter family	O.I.	C.G.	H.G.
56.4	99.8	42.4	At4g35240	829677	unknown protein	F:unknown;P:N-terminal protein myristoylation;C:plasma membrane;PMFOBV	O.I.	C.G.	H.G.
55.5	99.8	79.5	At1g10480	837588	ZFP5 (ZINC FINGER PROTEIN 5)	Encodes a zinc finger protein containing only a single zinc finger.	O.I.	C.G.	H.G.
55.1	99.8	184.2	At5g49630	835025	AAP6 (AMINO ACID PERMEASE 6)	Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.	O.I.	C.G.	H.G.
55.0	99.8	153.5	At2g18050	816317	HIS1-3 (HISTONE H1-3)	encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA.	O.I.	C.G.	H.G.
55.0	99.8	61.1	At5g63710	836491	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVA	O.I.	C.G.	H.G.
54.3	99.8	46.9	At1g36070	840511	WD-40 repeat family protein	F:molecular_function unknown;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex;MBFOPA	O.I.	C.G.	H.G.
53.5	99.8	67.5	At3g61880	825361	CYP78A9 (CYTOCHROME P450 78A9)	Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.	O.I.	C.G.	H.G.
52.8	99.8	26.0	At1g30160	839896	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
52.6	99.8	46.3	At3g57540	824921	remorin family protein	F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
51.8	99.8	46.9	At4g16000	827284	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
51.2	99.8	55.4	At5g53890	835470	leucine-rich repeat transmembrane protein kinase, putative	Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of phytosulfokine (PSK), which is a 5-aa tyrosine-sulfated peptide that primarily promotes cellular proliferation.	O.I.	C.G.	H.G.
51.1	99.8	76.0	At3g62150	825388	PGP21 (P-GLYCOPROTEIN 21)	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMAFPV	O.I.	C.G.	H.G.
50.0	99.8	107.9	At4g33040	829441	glutaredoxin family protein	F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:cellular_component unknown;PMFOB	O.I.	C.G.	H.G.
49.8	99.8	40.7	At3g11100	820281	transcription factor	F:transcription factor activity;P:regulation of transcription;C:nucleus;POMFBA	O.I.	C.G.	H.G.
49.3	99.8	112.2	At4g00880	827989	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
49.0	99.8	50.3	At4g17880	827511	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOVB	O.I.	C.G.	H.G.
48.6	99.8	20.2	At1g21220	3766770	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
48.3	99.8	93.6	At3g07360	819924	PUB9 (PLANT U-BOX 9)	Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.	O.I.	C.G.	H.G.
47.6	99.8	57.5	At4g19230	827663	CYP707A1	Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.	O.I.	C.G.	H.G.
47.3	99.8	157.7	At4g12280	826837	copper amine oxidase family protein	F:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:cellular_component unknown;FBMOPA	O.I.	C.G.	H.G.
47.2	99.8	29.8	At5g16200	831478	50S ribosomal protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
46.9	99.8	62.8	At2g33860	817956	ETT (ETTIN)	ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF.	O.I.	C.G.	H.G.
46.8	99.8	86.7	At3g06130	819786	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cell wall;MBOPFVA	O.I.	C.G.	H.G.
46.7	99.8	56.8	At3g63110	825486	ATIPT3 (ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 3)	Encodes cytokinin synthase involved in cytokinin biosynthesis. IPT3 subcellular localization is modulated by farnesylation- when farnesylated it is localized to the nucleus, otherwise to the chloroplast.	O.I.	C.G.	H.G.
46.6	99.8	236.7	At1g27030	839592	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOP	O.I.	C.G.	H.G.
46.3	99.8	111.2	At5g16570	831519	GLN1	Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium	O.I.	C.G.	H.G.
46.3	99.8	21.7	At4g25760	828681	AtGDU2 (Arabidopsis thaliana GLUTAMINE DUMPER 2)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
46.2	99.8	97.0	At3g49360	824098	glucosamine/galactosamine-6-phosphate isomerase family protein	F:6-phosphogluconolactonase activity, catalytic activity;P:pentose-phosphate shunt, carbohydrate metabolic process;C:plasma membrane;BOFMP	O.I.	C.G.	H.G.
46.2	99.8	35.2	At2g43660	818968	glycosyl hydrolase family protein 17	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
46.0	99.8	43.3	At4g00940	827952	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;POM	O.I.	C.G.	H.G.
45.8	99.8	235.2	At2g19810	816500	zinc finger (CCCH-type) family protein	F:transcription factor activity, nucleic acid binding;P:regulation of transcription;C:unknown;POM	O.I.	C.G.	H.G.
45.6	99.8	63.7	At4g39210	830076	APL3	Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots.	O.I.	C.G.	H.G.
45.6	99.8	47.6	At1g17590	838335	NF-YA8 (NUCLEAR FACTOR Y, SUBUNIT A8)	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:CCAAT-binding factor complex, nucleus, chloroplast;PMFOB	O.I.	C.G.	H.G.
45.5	99.8	26.0	At1g07300	837241	josephin protein-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
45.4	99.8	36.5	At3g21600	821714	senescence/dehydration-associated protein-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;PMF	O.I.	C.G.	H.G.
44.9	99.8	61.0	At1g15410	838111	aspartate-glutamate racemase family	F:racemase and epimerase activity, acting on amino acids and derivatives;P:amino acid metabolic process, metabolic process;C:chloroplast;BOAPF	O.I.	C.G.	H.G.
44.9	99.8	25.1	At2g40130	818604	heat shock protein-related	F:unknown;P:biological_process unknown;C:unknown;PB	O.I.	C.G.	H.G.
44.8	99.8	96.5	At5g49660	835028	leucine-rich repeat transmembrane protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
44.5	99.8	190.2	At4g19420	827683	pectinacetylesterase family protein	F:carboxylesterase activity;P:biological_process unknown;C:endomembrane system;PMOBA	O.I.	C.G.	H.G.
44.2	99.8	164.4	At5g25770	832646	unknown protein	F:unknown;P:biological_process unknown;C:unknown;BOAFP	O.I.	C.G.	H.G.
43.9	99.8	114.3	At1g77920	844127	bZIP family transcription factor	F:transcription factor activity, calmodulin binding;P:defense response to bacterium;C:nucleus;POFMB	O.I.	C.G.	H.G.
43.4	99.8	186.3	At2g42610	818861	LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.

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GSM ID	GSM142634
Assay name	MC002_ATH1_A4.3-dubos-6kc
GSE experiment	GSE6151: The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis

Microarray experiments to specifically-expressed genes

GSM ID GSM142634 Assay name MC002_ATH1_A4.3-dubos-6kc GSE experiment GSE6151: The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis

GSM ID GSM142634

Assay name MC002_ATH1_A4.3-dubos-6kc

GSE experiment GSE6151: The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis