CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM142593

Assay name DB001_ATH1_A3-Brown-cal

GSE experiment GSE6148: The trans-differentiation of cultured Arabidopsis cells

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
572.5 100.0 51.9 At2g23060 816836 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;PAOBM O.I. C.G. H.G.
458.1 100.0 225.9 At2g47520 819365 AP2 domain-containing transcription factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. O.I. C.G. H.G.
303.9 100.0 72.3 At5g56970 835799 CKX3 (CYTOKININ OXIDASE 3) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. O.I. C.G. H.G.
276.1 100.0 290.3 At3g29970 822700 germination protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
154.9 99.9 16.8 At4g13190 826933 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
139.6 99.9 144.0 At5g10040 830868 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
137.6 99.9 137.2 At4g33560 829495 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
130.8 99.9 67.7 At1g31320 840020 LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4) F:unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
126.3 99.9 82.9 At3g19200 821454 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
114.8 99.9 214.9 At3g25900 822186 HMT-1 F:homocysteine S-methyltransferase activity;P:methionine biosynthetic process;C:cellular_component unknown;BOMPFA O.I. C.G. H.G.
113.6 99.9 283.7 At1g43800 840977 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative F:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:membrane;PBOM O.I. C.G. H.G.
108.3 99.9 28.1 At3g07150 819901 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
100.4 99.9 298.6 At1g33055 840201 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
99.4 99.9 159.6 At2g17850 816295 - F:molecular_function unknown;P:aging;C:endomembrane system;BOPAMF O.I. C.G. H.G.
97.7 99.9 324.6 At3g43190 823393 SUS4 Encodes a protein with sucrose synthase activity (SUS4). O.I. C.G. H.G.
93.0 99.9 483.9 At3g46230 823768 ATHSP17.4 member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds O.I. C.G. H.G.
86.8 99.9 35.4 At5g62180 836339 AtCXE20 (Arabidopsis thaliana carboxyesterase 20) F:carboxylesterase activity;P:metabolic process;C:cellular_component unknown;BOPFMAV O.I. C.G. H.G.
82.7 99.9 125.7 At3g48100 823965 ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5) Encodes a transcription repressor that mediates a negative feedback loop in cytokinin signalling. ARR5 expression is upregulated by Class I KNOX genes. Arr5 protein is stabilized by cytokinin in a two-component phosphorelay. O.I. C.G. H.G.
81.1 99.9 65.9 At2g34900 818055 IMB1 (IMBIBITION-INDUCIBLE 1) Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination. O.I. C.G. H.G.
76.2 99.9 6.1 At5g26870 832745 AGL26 Root Specific O.I. C.G. H.G.
73.7 99.9 159.9 At4g27670 828881 HSP21 (HEAT SHOCK PROTEIN 21) chloroplast located small heat shock protein. O.I. C.G. H.G.
72.8 99.9 366.8 At5g12030 831076 AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A) Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development. O.I. C.G. H.G.
70.9 99.9 81.7 At1g72800 843611 nuM1-related F:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PBFMOAV O.I. C.G. H.G.
66.2 99.8 137.2 At5g62520 836372 SRO5 (SIMILAR TO RCD ONE 5) Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. O.I. C.G. H.G.
64.3 99.8 29.8 At1g55610 842010 BRL1 (BRI 1 LIKE) mutant has Altered vascular cell differentiation; LRR Receptor Kinase O.I. C.G. H.G.
63.9 99.8 19.7 At2g40530 818648 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
63.1 99.8 87.4 At5g11160 830985 APT5 (Adenine phosphoribosyltransferase 5) F:adenine phosphoribosyltransferase activity;P:nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process;C:cellular_component unknown;BOAMFP O.I. C.G. H.G.
63.0 99.8 157.1 At1g80670 844406 transducin family protein / WD-40 repeat family protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase O.I. C.G. H.G.
62.4 99.8 216.6 At5g12020 831075 HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM O.I. C.G. H.G.
60.7 99.8 33.0 At1g16530 838223 ASL9 (ASYMMETRIC LEAVES 2 LIKE 9) F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
60.2 99.8 247.8 At1g54050 841843 17.4 kDa class III heat shock protein (HSP17.4-CIII) F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM O.I. C.G. H.G.
59.5 99.8 79.9 At4g24110 828511 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
54.8 99.8 24.0 At5g53950 835478 CUC2 (CUP-SHAPED COTYLEDON 2) Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2. O.I. C.G. H.G.
54.1 99.8 99.6 At5g44730 834502 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, phosphoglycolate phosphatase activity, catalytic activity;P:metabolic process;C:endomembrane system;BMAOFP O.I. C.G. H.G.
51.6 99.8 47.8 At1g36060 840510 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. O.I. C.G. H.G.
50.6 99.8 68.6 At2g28450 817393 zinc finger (CCCH-type) family protein F:methyltransferase activity, zinc ion binding, RNA methyltransferase activity, nucleic acid binding;P:acetate biosynthetic process from carbon monoxide, methanol oxidation, RNA processing;C:cellular_component unknown;BOMFAPV O.I. C.G. H.G.
49.8 99.8 80.8 At5g05640 830447 nucleoprotein-related F:molecular_function unknown;P:biological_process unknown;C:membrane;VP O.I. C.G. H.G.
49.0 99.8 28.9 At1g20270 838615 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:protein metabolic process, peptidyl-proline hydroxylation to 4-hydroxy-L-proline;C:unknown;MOPBFV O.I. C.G. H.G.
47.4 99.8 401.5 At2g36460 818220 fructose-bisphosphate aldolase, putative F:fructose-bisphosphate aldolase activity, catalytic activity;P:response to cadmium ion, response to salt stress, pentose-phosphate shunt;C:mitochondrion, plasma membrane, membrane;OMBPF O.I. C.G. H.G.
46.9 99.8 53.1 At3g23150 821891 ETR2 (ethylene response 2) Involved in ethylene perception in Arabidopsis O.I. C.G. H.G.
46.1 99.8 149.5 At3g44720 823601 ADT4 (arogenate dehydratase 4) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identiﬁed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250]. O.I. C.G. H.G.
46.0 99.8 310.7 At3g03270 821303 universal stress protein (USP) family protein / early nodulin ENOD18 family protein F:unknown;P:response to stress;C:plasma membrane, membrane;PFMBO O.I. C.G. H.G.
45.9 99.8 101.0 At3g45770 823720 oxidoreductase, zinc-binding dehydrogenase family protein F:zinc ion binding, ATP binding;P:oxidation reduction, metabolic process;C:mitochondrion, chloroplast, nucleus;BOFMPA O.I. C.G. H.G.
44.2 99.8 173.5 At4g25200 828623 ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6) AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrial O.I. C.G. H.G.
44.0 99.8 58.3 At3g27220 822341 kelch repeat-containing protein F:unknown;P:biological_process unknown;C:Golgi apparatus;MBOVPFA O.I. C.G. H.G.
43.4 99.8 33.1 At4g11660 826771 AT-HSFB2B member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
43.3 99.8 42.1 At2g41780 818777 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
42.9 99.8 92.7 At2g47260 819339 WRKY23 member of WRKY Transcription Factor; Group I O.I. C.G. H.G.
42.6 99.8 40.4 At1g77150 844052 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
42.3 99.8 34.9 At3g62100 825383 IAA30 (INDOLE-3-ACETIC ACID INDUCIBLE 30) Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA30 lacks the conserved degron (domain II) found in many family members. IAA30 transcripts are induced by auxin treatment and accumulate preferentially in the quiescent center cells of the root meristem. Overexpression of IAA30 leads to defects in gravitropism, root development, root meristem maintenance, and cotyledon vascular development. O.I. C.G. H.G.
41.7 99.8 248.2 At1g53540 841789 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM O.I. C.G. H.G.
41.6 99.8 188.1 At5g59720 836093 HSP18.2 (heat shock protein 18.2) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock. O.I. C.G. H.G.
41.3 99.8 129.4 At1g52560 841687 26.5 kDa class I small heat shock protein-like (HSP26.5-P) F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:mitochondrion;BPOFAMV O.I. C.G. H.G.
39.5 99.8 55.1 At4g22780 828377 ACR7 Member of a family of ACT domain containing proteins . ACT domains are involved in amino acid binding . O.I. C.G. H.G.
38.3 99.8 160.1 At5g66985 836833 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
37.8 99.8 262.1 At1g07400 837252 17.8 kDa class I heat shock protein (HSP17.8-CI) F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM O.I. C.G. H.G.
36.6 99.7 222.6 At1g16030 838174 Hsp70b (heat shock protein 70B) F:ATP binding;P:protein folding, response to heat;C:cytosol, cell wall, plasma membrane, chloroplast, membrane;BOMFPVA O.I. C.G. H.G.
36.2 99.7 120.4 At5g47060 834752 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
35.5 99.7 189.8 At4g10270 826619 wound-responsive family protein F:molecular_function unknown;P:response to wounding;C:unknown;P O.I. C.G. H.G.
34.7 99.7 89.8 At4g03320 827972 tic20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV) F:unknown;P:unknown;C:unknown;PB O.I. C.G. H.G.
34.7 99.7 27.2 At4g37295 829884 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
34.3 99.7 91.9 At3g30720 822807 QQS (QUA-QUINE STARCH) F:molecular_function unknown;P:starch biosynthetic process;C:cytosol;P O.I. C.G. H.G.
33.1 99.7 59.7 At4g01120 826505 GBF2 (G-BOX BINDING FACTOR 2) bZIP (basic leucine zipper) transcription factor that binds to the G-box regulatory element found in many plant promoters. GBF2 nuclear localization is increased by blue light O.I. C.G. H.G.
32.6 99.7 106.5 At1g65370 842848 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
31.9 99.7 35.0 At3g47600 823914 ATMYB94 (MYB DOMAIN PROTEIN 94) Encodes a putative transcription factor (MYB94). O.I. C.G. H.G.
31.7 99.7 36.4 At3g24450 822035 copper-binding family protein F:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:endomembrane system;POM O.I. C.G. H.G.
30.9 99.7 217.2 At4g31290 829256 ChaC-like family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFP O.I. C.G. H.G.
30.9 99.7 59.0 At5g47830 834834 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
30.0 99.7 112.4 At5g39890 833986 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
30.0 99.7 75.6 At5g46840 834728 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MOFPBVA O.I. C.G. H.G.
29.8 99.7 342.7 At2g26400 817180 ATARD3 (ACIREDUCTONE DIOXYGENASE 3) Encodes a protein predicted to belong to the acireductone dioxygenase (ARD/ARD�)family. O.I. C.G. H.G.
29.7 99.7 62.2 At2g39705 818554 RTFL8 (ROTUNDIFOLIA LIKE 8) F:molecular_function unknown;P:shoot development;C:chloroplast;P O.I. C.G. H.G.
29.6 99.7 40.2 At5g10510 830915 AIL6 (AINTEGUMENTA-LIKE 6) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development. O.I. C.G. H.G.
29.5 99.7 27.9 At1g72660 843598 developmentally regulated GTP-binding protein, putative F:GTP binding;P:unknown;C:intracellular;BOMAFP O.I. C.G. H.G.
29.4 99.7 72.9 At5g64680 836589 unknown protein F:molecular_function unknown;P:biological_process unknown;C:nucleolus;MOPF O.I. C.G. H.G.
29.4 99.7 48.8 At3g54850 824650 PUB14 Encodes a protein with ubiquitin ligase activity. O.I. C.G. H.G.
29.3 99.7 81.3 At1g06080 837117 ADS1 (DELTA 9 DESATURASE 1) homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression down-regulated by cold temperature. O.I. C.G. H.G.
28.9 99.7 42.4 At3g61850 825358 DAG1 (dof affecting germination 1) Zinc finger transcription factor of the Dof family involved in the control of seed germination. O.I. C.G. H.G.
28.9 99.7 35.8 At5g24280 832495 - F:unknown;P:unknown;C:unknown;PMOBF O.I. C.G. H.G.
28.6 99.7 34.0 At1g59660 842256 nucleoporin family protein F:transporter activity;P:transport;C:chloroplast, nuclear pore;MBOFPVA O.I. C.G. H.G.
27.8 99.7 39.4 At2g47680 819381 zinc finger (CCCH type) helicase family protein F:helicase activity, zinc ion binding, nucleic acid binding, ATP binding;P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;C:chloroplast;MBOFPV O.I. C.G. H.G.
27.5 99.7 428.5 At4g27450 828854 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;PBOMF O.I. C.G. H.G.
27.3 99.7 106.1 At1g13380 837898 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
27.2 99.7 122.4 At3g53230 824489 cell division cycle protein 48, putative / CDC48, putative F:hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding;P:response to cadmium ion;C:cytosol, nucleolus, plasma membrane;BOMFPAV O.I. C.G. H.G.
27.0 99.7 222.1 At2g23170 816849 GH3.3 encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. O.I. C.G. H.G.
26.9 99.7 222.1 At4g39675 830122 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
26.7 99.7 33.8 At1g23280 838937 MAK16 protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA O.I. C.G. H.G.
26.2 99.7 15.1 At2g03830 814909 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
26.1 99.7 14.7 At4g32890 829425 zinc finger (GATA type) family protein F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOM O.I. C.G. H.G.
25.9 99.7 192.0 At5g37740 833752 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFO O.I. C.G. H.G.
25.8 99.7 58.7 At1g68360 843165 zinc finger protein-related F:transcription factor activity;P:regulation of transcription;C:intracellular;PMO O.I. C.G. H.G.
25.6 99.7 262.4 At5g52640 835341 ATHSP90.1 (HEAT SHOCK PROTEIN 90.1) Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. O.I. C.G. H.G.
25.5 99.7 36.0 At3g22980 821872 elongation factor Tu family protein F:translation factor activity, nucleic acid binding, GTP binding, GTPase activity;P:biological_process unknown;C:cellular_component unknown;BOMFAP O.I. C.G. H.G.
25.2 99.6 53.9 At4g14560 827103 IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE) auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein. O.I. C.G. H.G.
24.9 99.6 109.1 At3g16050 820850 A37 Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation. O.I. C.G. H.G.
24.9 99.6 23.6 At5g48650 834922 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:transport, nucleocytoplasmic transport;C:endomembrane system, intracellular;MPFOBA O.I. C.G. H.G.
24.3 99.6 134.2 At3g02790 820985 zinc finger (C2H2 type) family protein F:transcription factor activity;P:regulation of transcription;C:intracellular;PO O.I. C.G. H.G.
23.9 99.6 31.2 At5g12330 831108 LRP1 (LATERAL ROOT PRIMORDIUM 1) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation. O.I. C.G. H.G.
23.7 99.6 39.3 At2g41070 818706 EEL (ENHANCED EM LEVEL) Transcription factor homologous to ABI5. Regulates AtEm1 expression by binding directly at the AtEm1 promoter. Located in the nucleus and expressed during seed maturation in the cotyledons and later in the whole embryo. O.I. C.G. H.G.
23.6 99.6 45.0 At5g46410 834684 NLI interacting factor (NIF) family protein F:phosphatase activity;P:biological_process unknown;C:cellular_component unknown;MOFPBV O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
572.5	100.0	51.9	At2g23060	816836	GCN5-related N-acetyltransferase (GNAT) family protein	F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;PAOBM	O.I.	C.G.	H.G.
458.1	100.0	225.9	At2g47520	819365	AP2 domain-containing transcription factor, putative	encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.	O.I.	C.G.	H.G.
303.9	100.0	72.3	At5g56970	835799	CKX3 (CYTOKININ OXIDASE 3)	It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.	O.I.	C.G.	H.G.
276.1	100.0	290.3	At3g29970	822700	germination protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
154.9	99.9	16.8	At4g13190	826933	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
139.6	99.9	144.0	At5g10040	830868	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
137.6	99.9	137.2	At4g33560	829495	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
130.8	99.9	67.7	At1g31320	840020	LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4)	F:unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
126.3	99.9	82.9	At3g19200	821454	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
114.8	99.9	214.9	At3g25900	822186	HMT-1	F:homocysteine S-methyltransferase activity;P:methionine biosynthetic process;C:cellular_component unknown;BOMPFA	O.I.	C.G.	H.G.
113.6	99.9	283.7	At1g43800	840977	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	F:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:membrane;PBOM	O.I.	C.G.	H.G.
108.3	99.9	28.1	At3g07150	819901	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
100.4	99.9	298.6	At1g33055	840201	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
99.4	99.9	159.6	At2g17850	816295	-	F:molecular_function unknown;P:aging;C:endomembrane system;BOPAMF	O.I.	C.G.	H.G.
97.7	99.9	324.6	At3g43190	823393	SUS4	Encodes a protein with sucrose synthase activity (SUS4).	O.I.	C.G.	H.G.
93.0	99.9	483.9	At3g46230	823768	ATHSP17.4	member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds	O.I.	C.G.	H.G.
86.8	99.9	35.4	At5g62180	836339	AtCXE20 (Arabidopsis thaliana carboxyesterase 20)	F:carboxylesterase activity;P:metabolic process;C:cellular_component unknown;BOPFMAV	O.I.	C.G.	H.G.
82.7	99.9	125.7	At3g48100	823965	ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5)	Encodes a transcription repressor that mediates a negative feedback loop in cytokinin signalling. ARR5 expression is upregulated by Class I KNOX genes. Arr5 protein is stabilized by cytokinin in a two-component phosphorelay.	O.I.	C.G.	H.G.
81.1	99.9	65.9	At2g34900	818055	IMB1 (IMBIBITION-INDUCIBLE 1)	Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.	O.I.	C.G.	H.G.
76.2	99.9	6.1	At5g26870	832745	AGL26	Root Specific	O.I.	C.G.	H.G.
73.7	99.9	159.9	At4g27670	828881	HSP21 (HEAT SHOCK PROTEIN 21)	chloroplast located small heat shock protein.	O.I.	C.G.	H.G.
72.8	99.9	366.8	At5g12030	831076	AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)	Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.	O.I.	C.G.	H.G.
70.9	99.9	81.7	At1g72800	843611	nuM1-related	F:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PBFMOAV	O.I.	C.G.	H.G.
66.2	99.8	137.2	At5g62520	836372	SRO5 (SIMILAR TO RCD ONE 5)	Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.	O.I.	C.G.	H.G.
64.3	99.8	29.8	At1g55610	842010	BRL1 (BRI 1 LIKE)	mutant has Altered vascular cell differentiation; LRR Receptor Kinase	O.I.	C.G.	H.G.
63.9	99.8	19.7	At2g40530	818648	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
63.1	99.8	87.4	At5g11160	830985	APT5 (Adenine phosphoribosyltransferase 5)	F:adenine phosphoribosyltransferase activity;P:nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process;C:cellular_component unknown;BOAMFP	O.I.	C.G.	H.G.
63.0	99.8	157.1	At1g80670	844406	transducin family protein / WD-40 repeat family protein	This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase	O.I.	C.G.	H.G.
62.4	99.8	216.6	At5g12020	831075	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM	O.I.	C.G.	H.G.
60.7	99.8	33.0	At1g16530	838223	ASL9 (ASYMMETRIC LEAVES 2 LIKE 9)	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
60.2	99.8	247.8	At1g54050	841843	17.4 kDa class III heat shock protein (HSP17.4-CIII)	F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM	O.I.	C.G.	H.G.
59.5	99.8	79.9	At4g24110	828511	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
54.8	99.8	24.0	At5g53950	835478	CUC2 (CUP-SHAPED COTYLEDON 2)	Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2.	O.I.	C.G.	H.G.
54.1	99.8	99.6	At5g44730	834502	haloacid dehalogenase-like hydrolase family protein	F:hydrolase activity, phosphoglycolate phosphatase activity, catalytic activity;P:metabolic process;C:endomembrane system;BMAOFP	O.I.	C.G.	H.G.
51.6	99.8	47.8	At1g36060	840510	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.	O.I.	C.G.	H.G.
50.6	99.8	68.6	At2g28450	817393	zinc finger (CCCH-type) family protein	F:methyltransferase activity, zinc ion binding, RNA methyltransferase activity, nucleic acid binding;P:acetate biosynthetic process from carbon monoxide, methanol oxidation, RNA processing;C:cellular_component unknown;BOMFAPV	O.I.	C.G.	H.G.
49.8	99.8	80.8	At5g05640	830447	nucleoprotein-related	F:molecular_function unknown;P:biological_process unknown;C:membrane;VP	O.I.	C.G.	H.G.
49.0	99.8	28.9	At1g20270	838615	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:protein metabolic process, peptidyl-proline hydroxylation to 4-hydroxy-L-proline;C:unknown;MOPBFV	O.I.	C.G.	H.G.
47.4	99.8	401.5	At2g36460	818220	fructose-bisphosphate aldolase, putative	F:fructose-bisphosphate aldolase activity, catalytic activity;P:response to cadmium ion, response to salt stress, pentose-phosphate shunt;C:mitochondrion, plasma membrane, membrane;OMBPF	O.I.	C.G.	H.G.
46.9	99.8	53.1	At3g23150	821891	ETR2 (ethylene response 2)	Involved in ethylene perception in Arabidopsis	O.I.	C.G.	H.G.
46.1	99.8	149.5	At3g44720	823601	ADT4 (arogenate dehydratase 4)	Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identiﬁed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].	O.I.	C.G.	H.G.
46.0	99.8	310.7	At3g03270	821303	universal stress protein (USP) family protein / early nodulin ENOD18 family protein	F:unknown;P:response to stress;C:plasma membrane, membrane;PFMBO	O.I.	C.G.	H.G.
45.9	99.8	101.0	At3g45770	823720	oxidoreductase, zinc-binding dehydrogenase family protein	F:zinc ion binding, ATP binding;P:oxidation reduction, metabolic process;C:mitochondrion, chloroplast, nucleus;BOFMPA	O.I.	C.G.	H.G.
44.2	99.8	173.5	At4g25200	828623	ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)	AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrial	O.I.	C.G.	H.G.
44.0	99.8	58.3	At3g27220	822341	kelch repeat-containing protein	F:unknown;P:biological_process unknown;C:Golgi apparatus;MBOVPFA	O.I.	C.G.	H.G.
43.4	99.8	33.1	At4g11660	826771	AT-HSFB2B	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
43.3	99.8	42.1	At2g41780	818777	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
42.9	99.8	92.7	At2g47260	819339	WRKY23	member of WRKY Transcription Factor; Group I	O.I.	C.G.	H.G.
42.6	99.8	40.4	At1g77150	844052	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
42.3	99.8	34.9	At3g62100	825383	IAA30 (INDOLE-3-ACETIC ACID INDUCIBLE 30)	Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA30 lacks the conserved degron (domain II) found in many family members. IAA30 transcripts are induced by auxin treatment and accumulate preferentially in the quiescent center cells of the root meristem. Overexpression of IAA30 leads to defects in gravitropism, root development, root meristem maintenance, and cotyledon vascular development.	O.I.	C.G.	H.G.
41.7	99.8	248.2	At1g53540	841789	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM	O.I.	C.G.	H.G.
41.6	99.8	188.1	At5g59720	836093	HSP18.2 (heat shock protein 18.2)	encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.	O.I.	C.G.	H.G.
41.3	99.8	129.4	At1g52560	841687	26.5 kDa class I small heat shock protein-like (HSP26.5-P)	F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:mitochondrion;BPOFAMV	O.I.	C.G.	H.G.
39.5	99.8	55.1	At4g22780	828377	ACR7	Member of a family of ACT domain containing proteins . ACT domains are involved in amino acid binding .	O.I.	C.G.	H.G.
38.3	99.8	160.1	At5g66985	836833	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
37.8	99.8	262.1	At1g07400	837252	17.8 kDa class I heat shock protein (HSP17.8-CI)	F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM	O.I.	C.G.	H.G.
36.6	99.7	222.6	At1g16030	838174	Hsp70b (heat shock protein 70B)	F:ATP binding;P:protein folding, response to heat;C:cytosol, cell wall, plasma membrane, chloroplast, membrane;BOMFPVA	O.I.	C.G.	H.G.
36.2	99.7	120.4	At5g47060	834752	senescence-associated protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
35.5	99.7	189.8	At4g10270	826619	wound-responsive family protein	F:molecular_function unknown;P:response to wounding;C:unknown;P	O.I.	C.G.	H.G.
34.7	99.7	89.8	At4g03320	827972	tic20-IV (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV)	F:unknown;P:unknown;C:unknown;PB	O.I.	C.G.	H.G.
34.7	99.7	27.2	At4g37295	829884	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
34.3	99.7	91.9	At3g30720	822807	QQS (QUA-QUINE STARCH)	F:molecular_function unknown;P:starch biosynthetic process;C:cytosol;P	O.I.	C.G.	H.G.
33.1	99.7	59.7	At4g01120	826505	GBF2 (G-BOX BINDING FACTOR 2)	bZIP (basic leucine zipper) transcription factor that binds to the G-box regulatory element found in many plant promoters. GBF2 nuclear localization is increased by blue light	O.I.	C.G.	H.G.
32.6	99.7	106.5	At1g65370	842848	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
31.9	99.7	35.0	At3g47600	823914	ATMYB94 (MYB DOMAIN PROTEIN 94)	Encodes a putative transcription factor (MYB94).	O.I.	C.G.	H.G.
31.7	99.7	36.4	At3g24450	822035	copper-binding family protein	F:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:endomembrane system;POM	O.I.	C.G.	H.G.
30.9	99.7	217.2	At4g31290	829256	ChaC-like family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFP	O.I.	C.G.	H.G.
30.9	99.7	59.0	At5g47830	834834	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
30.0	99.7	112.4	At5g39890	833986	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
30.0	99.7	75.6	At5g46840	834728	RNA recognition motif (RRM)-containing protein	F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MOFPBVA	O.I.	C.G.	H.G.
29.8	99.7	342.7	At2g26400	817180	ATARD3 (ACIREDUCTONE DIOXYGENASE 3)	Encodes a protein predicted to belong to the acireductone dioxygenase (ARD/ARD�)family.	O.I.	C.G.	H.G.
29.7	99.7	62.2	At2g39705	818554	RTFL8 (ROTUNDIFOLIA LIKE 8)	F:molecular_function unknown;P:shoot development;C:chloroplast;P	O.I.	C.G.	H.G.
29.6	99.7	40.2	At5g10510	830915	AIL6 (AINTEGUMENTA-LIKE 6)	Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.	O.I.	C.G.	H.G.
29.5	99.7	27.9	At1g72660	843598	developmentally regulated GTP-binding protein, putative	F:GTP binding;P:unknown;C:intracellular;BOMAFP	O.I.	C.G.	H.G.
29.4	99.7	72.9	At5g64680	836589	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:nucleolus;MOPF	O.I.	C.G.	H.G.
29.4	99.7	48.8	At3g54850	824650	PUB14	Encodes a protein with ubiquitin ligase activity.	O.I.	C.G.	H.G.
29.3	99.7	81.3	At1g06080	837117	ADS1 (DELTA 9 DESATURASE 1)	homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression down-regulated by cold temperature.	O.I.	C.G.	H.G.
28.9	99.7	42.4	At3g61850	825358	DAG1 (dof affecting germination 1)	Zinc finger transcription factor of the Dof family involved in the control of seed germination.	O.I.	C.G.	H.G.
28.9	99.7	35.8	At5g24280	832495	-	F:unknown;P:unknown;C:unknown;PMOBF	O.I.	C.G.	H.G.
28.6	99.7	34.0	At1g59660	842256	nucleoporin family protein	F:transporter activity;P:transport;C:chloroplast, nuclear pore;MBOFPVA	O.I.	C.G.	H.G.
27.8	99.7	39.4	At2g47680	819381	zinc finger (CCCH type) helicase family protein	F:helicase activity, zinc ion binding, nucleic acid binding, ATP binding;P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;C:chloroplast;MBOFPV	O.I.	C.G.	H.G.
27.5	99.7	428.5	At4g27450	828854	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cytosol, nucleus, plasma membrane;PBOMF	O.I.	C.G.	H.G.
27.3	99.7	106.1	At1g13380	837898	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
27.2	99.7	122.4	At3g53230	824489	cell division cycle protein 48, putative / CDC48, putative	F:hydrolase activity, nucleoside-triphosphatase activity, binding, nucleotide binding, ATP binding;P:response to cadmium ion;C:cytosol, nucleolus, plasma membrane;BOMFPAV	O.I.	C.G.	H.G.
27.0	99.7	222.1	At2g23170	816849	GH3.3	encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro.	O.I.	C.G.	H.G.
26.9	99.7	222.1	At4g39675	830122	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
26.7	99.7	33.8	At1g23280	838937	MAK16 protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	O.I.	C.G.	H.G.
26.2	99.7	15.1	At2g03830	814909	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
26.1	99.7	14.7	At4g32890	829425	zinc finger (GATA type) family protein	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOM	O.I.	C.G.	H.G.
25.9	99.7	192.0	At5g37740	833752	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFO	O.I.	C.G.	H.G.
25.8	99.7	58.7	At1g68360	843165	zinc finger protein-related	F:transcription factor activity;P:regulation of transcription;C:intracellular;PMO	O.I.	C.G.	H.G.
25.6	99.7	262.4	At5g52640	835341	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.	O.I.	C.G.	H.G.
25.5	99.7	36.0	At3g22980	821872	elongation factor Tu family protein	F:translation factor activity, nucleic acid binding, GTP binding, GTPase activity;P:biological_process unknown;C:cellular_component unknown;BOMFAP	O.I.	C.G.	H.G.
25.2	99.6	53.9	At4g14560	827103	IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE)	auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein.	O.I.	C.G.	H.G.
24.9	99.6	109.1	At3g16050	820850	A37	Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.	O.I.	C.G.	H.G.
24.9	99.6	23.6	At5g48650	834922	nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein	F:RNA binding, nucleotide binding, nucleic acid binding;P:transport, nucleocytoplasmic transport;C:endomembrane system, intracellular;MPFOBA	O.I.	C.G.	H.G.
24.3	99.6	134.2	At3g02790	820985	zinc finger (C2H2 type) family protein	F:transcription factor activity;P:regulation of transcription;C:intracellular;PO	O.I.	C.G.	H.G.
23.9	99.6	31.2	At5g12330	831108	LRP1 (LATERAL ROOT PRIMORDIUM 1)	A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation.	O.I.	C.G.	H.G.
23.7	99.6	39.3	At2g41070	818706	EEL (ENHANCED EM LEVEL)	Transcription factor homologous to ABI5. Regulates AtEm1 expression by binding directly at the AtEm1 promoter. Located in the nucleus and expressed during seed maturation in the cotyledons and later in the whole embryo.	O.I.	C.G.	H.G.
23.6	99.6	45.0	At5g46410	834684	NLI interacting factor (NIF) family protein	F:phosphatase activity;P:biological_process unknown;C:cellular_component unknown;MOFPBV	O.I.	C.G.	H.G.

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GSM ID	GSM142593
Assay name	DB001_ATH1_A3-Brown-cal
GSE experiment	GSE6148: The trans-differentiation of cultured Arabidopsis cells

Microarray experiments to specifically-expressed genes

GSM ID GSM142593 Assay name DB001_ATH1_A3-Brown-cal GSE experiment GSE6148: The trans-differentiation of cultured Arabidopsis cells

GSM ID GSM142593

Assay name DB001_ATH1_A3-Brown-cal

GSE experiment GSE6148: The trans-differentiation of cultured Arabidopsis cells