CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM142592

Assay name DB001_ATH1_A2-Brown-cal

GSE experiment GSE6148: The trans-differentiation of cultured Arabidopsis cells

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
395.7 100.0 82.5 At5g56970 835799 CKX3 (CYTOKININ OXIDASE 3) It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. O.I. C.G. H.G.
328.8 100.0 191.4 At2g47520 819365 AP2 domain-containing transcription factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. O.I. C.G. H.G.
232.4 100.0 185.8 At5g10040 830868 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
175.0 100.0 154.8 At4g33560 829495 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
168.6 100.0 226.8 At3g29970 822700 germination protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
154.0 99.9 26.9 At2g23060 816836 GCN5-related N-acetyltransferase (GNAT) family protein F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;PAOBM O.I. C.G. H.G.
136.8 99.9 187.2 At2g17850 816295 - F:molecular_function unknown;P:aging;C:endomembrane system;BOPAMF O.I. C.G. H.G.
127.4 99.9 83.3 At3g19200 821454 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
124.4 99.9 296.9 At1g43800 840977 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative F:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:membrane;PBOM O.I. C.G. H.G.
122.3 99.9 65.5 At1g31320 840020 LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4) F:unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
122.1 99.9 121.6 At5g11160 830985 APT5 (Adenine phosphoribosyltransferase 5) F:adenine phosphoribosyltransferase activity;P:nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process;C:cellular_component unknown;BOAMFP O.I. C.G. H.G.
105.8 99.9 203.6 At1g80670 844406 transducin family protein / WD-40 repeat family protein This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase O.I. C.G. H.G.
100.9 99.9 138.8 At3g48100 823965 ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5) Encodes a transcription repressor that mediates a negative feedback loop in cytokinin signalling. ARR5 expression is upregulated by Class I KNOX genes. Arr5 protein is stabilized by cytokinin in a two-component phosphorelay. O.I. C.G. H.G.
95.8 99.9 321.6 At3g43190 823393 SUS4 Encodes a protein with sucrose synthase activity (SUS4). O.I. C.G. H.G.
93.2 99.9 130.7 At5g44730 834502 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, phosphoglycolate phosphatase activity, catalytic activity;P:metabolic process;C:endomembrane system;BMAOFP O.I. C.G. H.G.
85.3 99.9 35.1 At5g62180 836339 AtCXE20 (Arabidopsis thaliana carboxyesterase 20) F:carboxylesterase activity;P:metabolic process;C:cellular_component unknown;BOPFMAV O.I. C.G. H.G.
84.9 99.9 67.4 At2g34900 818055 IMB1 (IMBIBITION-INDUCIBLE 1) Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination. O.I. C.G. H.G.
84.5 99.9 155.1 At5g62520 836372 SRO5 (SIMILAR TO RCD ONE 5) Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. O.I. C.G. H.G.
82.7 99.9 71.6 At3g61850 825358 DAG1 (dof affecting germination 1) Zinc finger transcription factor of the Dof family involved in the control of seed germination. O.I. C.G. H.G.
79.6 99.9 179.0 At3g25900 822186 HMT-1 F:homocysteine S-methyltransferase activity;P:methionine biosynthetic process;C:cellular_component unknown;BOMPFA O.I. C.G. H.G.
79.5 99.9 92.3 At4g24110 828511 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
69.5 99.9 34.5 At1g20270 838615 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:protein metabolic process, peptidyl-proline hydroxylation to 4-hydroxy-L-proline;C:unknown;MOPBFV O.I. C.G. H.G.
63.3 99.8 237.1 At1g33055 840201 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
63.2 99.8 40.1 At5g26200 832689 mitochondrial substrate carrier family protein F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO O.I. C.G. H.G.
60.6 99.8 116.0 At3g45770 823720 oxidoreductase, zinc-binding dehydrogenase family protein F:zinc ion binding, ATP binding;P:oxidation reduction, metabolic process;C:mitochondrion, chloroplast, nucleus;BOFMPA O.I. C.G. H.G.
60.1 99.8 33.8 At4g31020 829229 unknown protein F:unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OBMPFVA O.I. C.G. H.G.
59.2 99.8 23.3 At4g19980 827742 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
58.9 99.8 87.9 At5g05640 830447 nucleoprotein-related F:molecular_function unknown;P:biological_process unknown;C:membrane;VP O.I. C.G. H.G.
58.5 99.8 49.4 At3g24450 822035 copper-binding family protein F:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:endomembrane system;POM O.I. C.G. H.G.
57.3 99.8 113.7 At1g06080 837117 ADS1 (DELTA 9 DESATURASE 1) homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression down-regulated by cold temperature. O.I. C.G. H.G.
53.7 99.8 45.4 At1g77150 844052 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
53.5 99.8 232.8 At4g10270 826619 wound-responsive family protein F:molecular_function unknown;P:response to wounding;C:unknown;P O.I. C.G. H.G.
53.1 99.8 39.1 At3g62100 825383 IAA30 (INDOLE-3-ACETIC ACID INDUCIBLE 30) Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA30 lacks the conserved degron (domain II) found in many family members. IAA30 transcripts are induced by auxin treatment and accumulate preferentially in the quiescent center cells of the root meristem. Overexpression of IAA30 leads to defects in gravitropism, root development, root meristem maintenance, and cotyledon vascular development. O.I. C.G. H.G.
50.4 99.8 58.3 At3g48510 824010 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
49.8 99.8 26.2 At1g55610 842010 BRL1 (BRI 1 LIKE) mutant has Altered vascular cell differentiation; LRR Receptor Kinase O.I. C.G. H.G.
49.5 99.8 110.4 At3g30720 822807 QQS (QUA-QUINE STARCH) F:molecular_function unknown;P:starch biosynthetic process;C:cytosol;P O.I. C.G. H.G.
47.2 99.8 128.0 At1g65370 842848 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
46.7 99.8 60.1 At3g27220 822341 kelch repeat-containing protein F:unknown;P:biological_process unknown;C:Golgi apparatus;MBOVPFA O.I. C.G. H.G.
46.3 99.8 176.1 At5g66985 836833 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
45.0 99.8 65.1 At1g72800 843611 nuM1-related F:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PBFMOAV O.I. C.G. H.G.
45.0 99.8 28.2 At1g06980 837208 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
44.8 99.8 126.7 At4g17940 827519 binding F:binding;P:biological_process unknown;C:unknown;PBOMA O.I. C.G. H.G.
44.3 99.8 29.7 At5g17800 831648 AtMYB56 (myb domain protein 56) Member of the R2R3 factor gene family. O.I. C.G. H.G.
43.1 99.8 92.9 At2g47260 819339 WRKY23 member of WRKY Transcription Factor; Group I O.I. C.G. H.G.
42.9 99.8 131.1 At5g47060 834752 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
42.1 99.8 50.3 At3g23150 821891 ETR2 (ethylene response 2) Involved in ethylene perception in Arabidopsis O.I. C.G. H.G.
41.7 99.8 47.7 At5g10510 830915 AIL6 (AINTEGUMENTA-LIKE 6) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development. O.I. C.G. H.G.
41.6 99.8 41.0 At1g59660 842256 nucleoporin family protein F:transporter activity;P:transport;C:chloroplast, nuclear pore;MBOFPVA O.I. C.G. H.G.
40.8 99.8 88.1 At5g46840 834728 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MOFPBVA O.I. C.G. H.G.
40.8 99.8 18.3 At4g32890 829425 zinc finger (GATA type) family protein F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOM O.I. C.G. H.G.
39.3 99.8 16.9 At3g07150 819901 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
37.7 99.7 26.0 At1g16530 838223 ASL9 (ASYMMETRIC LEAVES 2 LIKE 9) F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
37.5 99.7 49.4 At2g41070 818706 EEL (ENHANCED EM LEVEL) Transcription factor homologous to ABI5. Regulates AtEm1 expression by binding directly at the AtEm1 promoter. Located in the nucleus and expressed during seed maturation in the cotyledons and later in the whole embryo. O.I. C.G. H.G.
35.9 99.7 44.8 At2g47680 819381 zinc finger (CCCH type) helicase family protein F:helicase activity, zinc ion binding, nucleic acid binding, ATP binding;P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;C:chloroplast;MBOFPV O.I. C.G. H.G.
35.4 99.7 189.8 At1g54050 841843 17.4 kDa class III heat shock protein (HSP17.4-CIII) F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM O.I. C.G. H.G.
34.4 99.7 56.5 At2g28450 817393 zinc finger (CCCH-type) family protein F:methyltransferase activity, zinc ion binding, RNA methyltransferase activity, nucleic acid binding;P:acetate biosynthetic process from carbon monoxide, methanol oxidation, RNA processing;C:cellular_component unknown;BOMFAPV O.I. C.G. H.G.
33.9 99.7 66.5 At2g39705 818554 RTFL8 (ROTUNDIFOLIA LIKE 8) F:molecular_function unknown;P:shoot development;C:chloroplast;P O.I. C.G. H.G.
33.3 99.7 50.7 At4g22780 828377 ACR7 Member of a family of ACT domain containing proteins . ACT domains are involved in amino acid binding . O.I. C.G. H.G.
32.7 99.7 80.4 At4g33950 829541 OST1 (OPEN STOMATA 1) Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network. O.I. C.G. H.G.
32.5 99.7 39.6 At2g47950 819407 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
32.5 99.7 35.4 At3g47600 823914 ATMYB94 (MYB DOMAIN PROTEIN 94) Encodes a putative transcription factor (MYB94). O.I. C.G. H.G.
32.1 99.7 137.2 At1g19600 838547 pfkB-type carbohydrate kinase family protein F:kinase activity;P:D-ribose catabolic process;C:cellular_component unknown;BOMPAF O.I. C.G. H.G.
31.5 99.7 115.1 At5g39890 833986 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
31.3 99.7 42.0 At4g14720 827125 PPD2 PPD2 (and its paralog, PPD1) encode plant-specific putative DNA-binding proteins. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth. O.I. C.G. H.G.
31.2 99.7 63.2 At1g69680 843304 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FMOP O.I. C.G. H.G.
31.1 99.7 325.5 At2g36460 818220 fructose-bisphosphate aldolase, putative F:fructose-bisphosphate aldolase activity, catalytic activity;P:response to cadmium ion, response to salt stress, pentose-phosphate shunt;C:mitochondrion, plasma membrane, membrane;OMBPF O.I. C.G. H.G.
31.1 99.7 52.3 At3g10040 820165 transcription factor F:transcription factor activity;P:regulation of transcription;C:unknown;OMFPBVA O.I. C.G. H.G.
31.0 99.7 254.9 At3g03270 821303 universal stress protein (USP) family protein / early nodulin ENOD18 family protein F:unknown;P:response to stress;C:plasma membrane, membrane;PFMBO O.I. C.G. H.G.
31.0 99.7 217.6 At4g31290 829256 ChaC-like family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFP O.I. C.G. H.G.
30.6 99.7 277.3 At3g46230 823768 ATHSP17.4 member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds O.I. C.G. H.G.
30.5 99.7 49.6 At3g54850 824650 PUB14 Encodes a protein with ubiquitin ligase activity. O.I. C.G. H.G.
30.4 99.7 47.3 At5g25475 832622 DNA binding F:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P O.I. C.G. H.G.
30.3 99.7 77.6 At1g27650 839657 ATU2AF35A U2 auxiliary factor small subunit. The atU2AF35a protein and its homolog, atU2AF35b, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions. O.I. C.G. H.G.
29.6 99.7 119.7 At3g44720 823601 ADT4 (arogenate dehydratase 4) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identiﬁed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250]. O.I. C.G. H.G.
29.5 99.7 58.2 At3g26770 822290 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
29.0 99.7 49.1 At3g47610 823915 transcription regulator/ zinc ion binding F:transcription regulator activity, zinc ion binding;P:regulation of transcription;C:nucleus;MFOP O.I. C.G. H.G.
28.9 99.7 35.8 At1g36060 840510 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. O.I. C.G. H.G.
28.9 99.7 24.7 At1g79580 844296 SMB (SOMBRERO) NAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions. O.I. C.G. H.G.
28.8 99.7 34.3 At5g12330 831108 LRP1 (LATERAL ROOT PRIMORDIUM 1) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation. O.I. C.G. H.G.
28.7 99.7 15.8 At2g03830 814909 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
28.4 99.7 71.7 At5g64680 836589 unknown protein F:molecular_function unknown;P:biological_process unknown;C:nucleolus;MOPF O.I. C.G. H.G.
27.6 99.7 96.3 At2g19590 816478 ACO1 (ACC OXIDASE 1) encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase O.I. C.G. H.G.
27.6 99.7 41.1 At2g38370 818418 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
27.2 99.7 30.0 At5g23380 832402 unknown protein F:molecular_function unknown;P:biological_process unknown;C:membrane;PO O.I. C.G. H.G.
27.0 99.7 222.3 At4g39675 830122 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
26.9 99.7 55.7 At4g14560 827103 IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE) auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein. O.I. C.G. H.G.
26.8 99.7 24.9 At1g76660 843999 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OPMFBV O.I. C.G. H.G.
26.7 99.7 16.7 At5g53950 835478 CUC2 (CUP-SHAPED COTYLEDON 2) Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2. O.I. C.G. H.G.
26.5 99.7 37.0 At1g26730 839214 EXS family protein / ERD1/XPR1/SYG1 family protein F:unknown;P:unknown;C:integral to membrane, plasma membrane;FMPOB O.I. C.G. H.G.
26.3 99.7 191.0 At3g02550 821112 LBD41 (LOB DOMAIN-CONTAINING PROTEIN 41) F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
25.8 99.7 60.3 At3g52870 824453 calmodulin-binding family protein F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PFBO O.I. C.G. H.G.
25.6 99.7 52.6 At4g01120 826505 GBF2 (G-BOX BINDING FACTOR 2) bZIP (basic leucine zipper) transcription factor that binds to the G-box regulatory element found in many plant promoters. GBF2 nuclear localization is increased by blue light O.I. C.G. H.G.
25.6 99.7 12.5 At2g40530 818648 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
25.4 99.6 32.3 At2g41780 818777 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
25.1 99.6 62.2 At4g00238 825892 DNA-binding storekeeper protein-related F:unknown;P:biological_process unknown;C:nucleolus;OMPFBV O.I. C.G. H.G.
24.8 99.6 188.0 At5g37740 833752 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFO O.I. C.G. H.G.
24.7 99.6 50.9 At4g31430 829270 unknown protein F:unknown;P:unknown;C:plasma membrane;OMPFBV O.I. C.G. H.G.
24.3 99.6 69.5 At2g26430 817183 RCY1 (ARGININE-RICH CYCLIN 1) Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast. O.I. C.G. H.G.
23.9 99.6 32.0 At1g23280 838937 MAK16 protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA O.I. C.G. H.G.
23.8 99.6 69.0 At1g72360 843568 ethylene-responsive element-binding protein, putative encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
395.7	100.0	82.5	At5g56970	835799	CKX3 (CYTOKININ OXIDASE 3)	It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.	O.I.	C.G.	H.G.
328.8	100.0	191.4	At2g47520	819365	AP2 domain-containing transcription factor, putative	encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.	O.I.	C.G.	H.G.
232.4	100.0	185.8	At5g10040	830868	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
175.0	100.0	154.8	At4g33560	829495	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
168.6	100.0	226.8	At3g29970	822700	germination protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
154.0	99.9	26.9	At2g23060	816836	GCN5-related N-acetyltransferase (GNAT) family protein	F:N-acetyltransferase activity;P:metabolic process;C:cellular_component unknown;PAOBM	O.I.	C.G.	H.G.
136.8	99.9	187.2	At2g17850	816295	-	F:molecular_function unknown;P:aging;C:endomembrane system;BOPAMF	O.I.	C.G.	H.G.
127.4	99.9	83.3	At3g19200	821454	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
124.4	99.9	296.9	At1g43800	840977	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	F:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:membrane;PBOM	O.I.	C.G.	H.G.
122.3	99.9	65.5	At1g31320	840020	LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4)	F:unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
122.1	99.9	121.6	At5g11160	830985	APT5 (Adenine phosphoribosyltransferase 5)	F:adenine phosphoribosyltransferase activity;P:nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process;C:cellular_component unknown;BOAMFP	O.I.	C.G.	H.G.
105.8	99.9	203.6	At1g80670	844406	transducin family protein / WD-40 repeat family protein	This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase	O.I.	C.G.	H.G.
100.9	99.9	138.8	At3g48100	823965	ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5)	Encodes a transcription repressor that mediates a negative feedback loop in cytokinin signalling. ARR5 expression is upregulated by Class I KNOX genes. Arr5 protein is stabilized by cytokinin in a two-component phosphorelay.	O.I.	C.G.	H.G.
95.8	99.9	321.6	At3g43190	823393	SUS4	Encodes a protein with sucrose synthase activity (SUS4).	O.I.	C.G.	H.G.
93.2	99.9	130.7	At5g44730	834502	haloacid dehalogenase-like hydrolase family protein	F:hydrolase activity, phosphoglycolate phosphatase activity, catalytic activity;P:metabolic process;C:endomembrane system;BMAOFP	O.I.	C.G.	H.G.
85.3	99.9	35.1	At5g62180	836339	AtCXE20 (Arabidopsis thaliana carboxyesterase 20)	F:carboxylesterase activity;P:metabolic process;C:cellular_component unknown;BOPFMAV	O.I.	C.G.	H.G.
84.9	99.9	67.4	At2g34900	818055	IMB1 (IMBIBITION-INDUCIBLE 1)	Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.	O.I.	C.G.	H.G.
84.5	99.9	155.1	At5g62520	836372	SRO5 (SIMILAR TO RCD ONE 5)	Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.	O.I.	C.G.	H.G.
82.7	99.9	71.6	At3g61850	825358	DAG1 (dof affecting germination 1)	Zinc finger transcription factor of the Dof family involved in the control of seed germination.	O.I.	C.G.	H.G.
79.6	99.9	179.0	At3g25900	822186	HMT-1	F:homocysteine S-methyltransferase activity;P:methionine biosynthetic process;C:cellular_component unknown;BOMPFA	O.I.	C.G.	H.G.
79.5	99.9	92.3	At4g24110	828511	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
69.5	99.9	34.5	At1g20270	838615	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:protein metabolic process, peptidyl-proline hydroxylation to 4-hydroxy-L-proline;C:unknown;MOPBFV	O.I.	C.G.	H.G.
63.3	99.8	237.1	At1g33055	840201	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
63.2	99.8	40.1	At5g26200	832689	mitochondrial substrate carrier family protein	F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO	O.I.	C.G.	H.G.
60.6	99.8	116.0	At3g45770	823720	oxidoreductase, zinc-binding dehydrogenase family protein	F:zinc ion binding, ATP binding;P:oxidation reduction, metabolic process;C:mitochondrion, chloroplast, nucleus;BOFMPA	O.I.	C.G.	H.G.
60.1	99.8	33.8	At4g31020	829229	unknown protein	F:unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;OBMPFVA	O.I.	C.G.	H.G.
59.2	99.8	23.3	At4g19980	827742	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
58.9	99.8	87.9	At5g05640	830447	nucleoprotein-related	F:molecular_function unknown;P:biological_process unknown;C:membrane;VP	O.I.	C.G.	H.G.
58.5	99.8	49.4	At3g24450	822035	copper-binding family protein	F:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:endomembrane system;POM	O.I.	C.G.	H.G.
57.3	99.8	113.7	At1g06080	837117	ADS1 (DELTA 9 DESATURASE 1)	homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression down-regulated by cold temperature.	O.I.	C.G.	H.G.
53.7	99.8	45.4	At1g77150	844052	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
53.5	99.8	232.8	At4g10270	826619	wound-responsive family protein	F:molecular_function unknown;P:response to wounding;C:unknown;P	O.I.	C.G.	H.G.
53.1	99.8	39.1	At3g62100	825383	IAA30 (INDOLE-3-ACETIC ACID INDUCIBLE 30)	Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA30 lacks the conserved degron (domain II) found in many family members. IAA30 transcripts are induced by auxin treatment and accumulate preferentially in the quiescent center cells of the root meristem. Overexpression of IAA30 leads to defects in gravitropism, root development, root meristem maintenance, and cotyledon vascular development.	O.I.	C.G.	H.G.
50.4	99.8	58.3	At3g48510	824010	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
49.8	99.8	26.2	At1g55610	842010	BRL1 (BRI 1 LIKE)	mutant has Altered vascular cell differentiation; LRR Receptor Kinase	O.I.	C.G.	H.G.
49.5	99.8	110.4	At3g30720	822807	QQS (QUA-QUINE STARCH)	F:molecular_function unknown;P:starch biosynthetic process;C:cytosol;P	O.I.	C.G.	H.G.
47.2	99.8	128.0	At1g65370	842848	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
46.7	99.8	60.1	At3g27220	822341	kelch repeat-containing protein	F:unknown;P:biological_process unknown;C:Golgi apparatus;MBOVPFA	O.I.	C.G.	H.G.
46.3	99.8	176.1	At5g66985	836833	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
45.0	99.8	65.1	At1g72800	843611	nuM1-related	F:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PBFMOAV	O.I.	C.G.	H.G.
45.0	99.8	28.2	At1g06980	837208	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
44.8	99.8	126.7	At4g17940	827519	binding	F:binding;P:biological_process unknown;C:unknown;PBOMA	O.I.	C.G.	H.G.
44.3	99.8	29.7	At5g17800	831648	AtMYB56 (myb domain protein 56)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
43.1	99.8	92.9	At2g47260	819339	WRKY23	member of WRKY Transcription Factor; Group I	O.I.	C.G.	H.G.
42.9	99.8	131.1	At5g47060	834752	senescence-associated protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
42.1	99.8	50.3	At3g23150	821891	ETR2 (ethylene response 2)	Involved in ethylene perception in Arabidopsis	O.I.	C.G.	H.G.
41.7	99.8	47.7	At5g10510	830915	AIL6 (AINTEGUMENTA-LIKE 6)	Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.	O.I.	C.G.	H.G.
41.6	99.8	41.0	At1g59660	842256	nucleoporin family protein	F:transporter activity;P:transport;C:chloroplast, nuclear pore;MBOFPVA	O.I.	C.G.	H.G.
40.8	99.8	88.1	At5g46840	834728	RNA recognition motif (RRM)-containing protein	F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;MOFPBVA	O.I.	C.G.	H.G.
40.8	99.8	18.3	At4g32890	829425	zinc finger (GATA type) family protein	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOM	O.I.	C.G.	H.G.
39.3	99.8	16.9	At3g07150	819901	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
37.7	99.7	26.0	At1g16530	838223	ASL9 (ASYMMETRIC LEAVES 2 LIKE 9)	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
37.5	99.7	49.4	At2g41070	818706	EEL (ENHANCED EM LEVEL)	Transcription factor homologous to ABI5. Regulates AtEm1 expression by binding directly at the AtEm1 promoter. Located in the nucleus and expressed during seed maturation in the cotyledons and later in the whole embryo.	O.I.	C.G.	H.G.
35.9	99.7	44.8	At2g47680	819381	zinc finger (CCCH type) helicase family protein	F:helicase activity, zinc ion binding, nucleic acid binding, ATP binding;P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;C:chloroplast;MBOFPV	O.I.	C.G.	H.G.
35.4	99.7	189.8	At1g54050	841843	17.4 kDa class III heat shock protein (HSP17.4-CIII)	F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM	O.I.	C.G.	H.G.
34.4	99.7	56.5	At2g28450	817393	zinc finger (CCCH-type) family protein	F:methyltransferase activity, zinc ion binding, RNA methyltransferase activity, nucleic acid binding;P:acetate biosynthetic process from carbon monoxide, methanol oxidation, RNA processing;C:cellular_component unknown;BOMFAPV	O.I.	C.G.	H.G.
33.9	99.7	66.5	At2g39705	818554	RTFL8 (ROTUNDIFOLIA LIKE 8)	F:molecular_function unknown;P:shoot development;C:chloroplast;P	O.I.	C.G.	H.G.
33.3	99.7	50.7	At4g22780	828377	ACR7	Member of a family of ACT domain containing proteins . ACT domains are involved in amino acid binding .	O.I.	C.G.	H.G.
32.7	99.7	80.4	At4g33950	829541	OST1 (OPEN STOMATA 1)	Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.	O.I.	C.G.	H.G.
32.5	99.7	39.6	At2g47950	819407	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
32.5	99.7	35.4	At3g47600	823914	ATMYB94 (MYB DOMAIN PROTEIN 94)	Encodes a putative transcription factor (MYB94).	O.I.	C.G.	H.G.
32.1	99.7	137.2	At1g19600	838547	pfkB-type carbohydrate kinase family protein	F:kinase activity;P:D-ribose catabolic process;C:cellular_component unknown;BOMPAF	O.I.	C.G.	H.G.
31.5	99.7	115.1	At5g39890	833986	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
31.3	99.7	42.0	At4g14720	827125	PPD2	PPD2 (and its paralog, PPD1) encode plant-specific putative DNA-binding proteins. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth.	O.I.	C.G.	H.G.
31.2	99.7	63.2	At1g69680	843304	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FMOP	O.I.	C.G.	H.G.
31.1	99.7	325.5	At2g36460	818220	fructose-bisphosphate aldolase, putative	F:fructose-bisphosphate aldolase activity, catalytic activity;P:response to cadmium ion, response to salt stress, pentose-phosphate shunt;C:mitochondrion, plasma membrane, membrane;OMBPF	O.I.	C.G.	H.G.
31.1	99.7	52.3	At3g10040	820165	transcription factor	F:transcription factor activity;P:regulation of transcription;C:unknown;OMFPBVA	O.I.	C.G.	H.G.
31.0	99.7	254.9	At3g03270	821303	universal stress protein (USP) family protein / early nodulin ENOD18 family protein	F:unknown;P:response to stress;C:plasma membrane, membrane;PFMBO	O.I.	C.G.	H.G.
31.0	99.7	217.6	At4g31290	829256	ChaC-like family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFP	O.I.	C.G.	H.G.
30.6	99.7	277.3	At3g46230	823768	ATHSP17.4	member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds	O.I.	C.G.	H.G.
30.5	99.7	49.6	At3g54850	824650	PUB14	Encodes a protein with ubiquitin ligase activity.	O.I.	C.G.	H.G.
30.4	99.7	47.3	At5g25475	832622	DNA binding	F:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P	O.I.	C.G.	H.G.
30.3	99.7	77.6	At1g27650	839657	ATU2AF35A	U2 auxiliary factor small subunit. The atU2AF35a protein and its homolog, atU2AF35b, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.	O.I.	C.G.	H.G.
29.6	99.7	119.7	At3g44720	823601	ADT4 (arogenate dehydratase 4)	Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identiﬁed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].	O.I.	C.G.	H.G.
29.5	99.7	58.2	At3g26770	822290	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
29.0	99.7	49.1	At3g47610	823915	transcription regulator/ zinc ion binding	F:transcription regulator activity, zinc ion binding;P:regulation of transcription;C:nucleus;MFOP	O.I.	C.G.	H.G.
28.9	99.7	35.8	At1g36060	840510	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.	O.I.	C.G.	H.G.
28.9	99.7	24.7	At1g79580	844296	SMB (SOMBRERO)	NAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions.	O.I.	C.G.	H.G.
28.8	99.7	34.3	At5g12330	831108	LRP1 (LATERAL ROOT PRIMORDIUM 1)	A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation.	O.I.	C.G.	H.G.
28.7	99.7	15.8	At2g03830	814909	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
28.4	99.7	71.7	At5g64680	836589	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:nucleolus;MOPF	O.I.	C.G.	H.G.
27.6	99.7	96.3	At2g19590	816478	ACO1 (ACC OXIDASE 1)	encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase	O.I.	C.G.	H.G.
27.6	99.7	41.1	At2g38370	818418	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
27.2	99.7	30.0	At5g23380	832402	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:membrane;PO	O.I.	C.G.	H.G.
27.0	99.7	222.3	At4g39675	830122	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
26.9	99.7	55.7	At4g14560	827103	IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE)	auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein.	O.I.	C.G.	H.G.
26.8	99.7	24.9	At1g76660	843999	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OPMFBV	O.I.	C.G.	H.G.
26.7	99.7	16.7	At5g53950	835478	CUC2 (CUP-SHAPED COTYLEDON 2)	Transcriptional activator of the NAC gene family, with CUC1 redundantly required for embryonic apical meristem formation, cotyledon separation and expression of STM. Proper timing of CUC2 expression is required to maintain the phyllotactic pattern initiated in the meristem. CUC2 expression in leaf sinus region is required for serration and the extent of serration is modulated by mir164A mediated repression of CUC2.	O.I.	C.G.	H.G.
26.5	99.7	37.0	At1g26730	839214	EXS family protein / ERD1/XPR1/SYG1 family protein	F:unknown;P:unknown;C:integral to membrane, plasma membrane;FMPOB	O.I.	C.G.	H.G.
26.3	99.7	191.0	At3g02550	821112	LBD41 (LOB DOMAIN-CONTAINING PROTEIN 41)	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
25.8	99.7	60.3	At3g52870	824453	calmodulin-binding family protein	F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PFBO	O.I.	C.G.	H.G.
25.6	99.7	52.6	At4g01120	826505	GBF2 (G-BOX BINDING FACTOR 2)	bZIP (basic leucine zipper) transcription factor that binds to the G-box regulatory element found in many plant promoters. GBF2 nuclear localization is increased by blue light	O.I.	C.G.	H.G.
25.6	99.7	12.5	At2g40530	818648	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
25.4	99.6	32.3	At2g41780	818777	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
25.1	99.6	62.2	At4g00238	825892	DNA-binding storekeeper protein-related	F:unknown;P:biological_process unknown;C:nucleolus;OMPFBV	O.I.	C.G.	H.G.
24.8	99.6	188.0	At5g37740	833752	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFO	O.I.	C.G.	H.G.
24.7	99.6	50.9	At4g31430	829270	unknown protein	F:unknown;P:unknown;C:plasma membrane;OMPFBV	O.I.	C.G.	H.G.
24.3	99.6	69.5	At2g26430	817183	RCY1 (ARGININE-RICH CYCLIN 1)	Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast.	O.I.	C.G.	H.G.
23.9	99.6	32.0	At1g23280	838937	MAK16 protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPVA	O.I.	C.G.	H.G.
23.8	99.6	69.0	At1g72360	843568	ethylene-responsive element-binding protein, putative	encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.	O.I.	C.G.	H.G.

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GSM ID	GSM142592
Assay name	DB001_ATH1_A2-Brown-cal
GSE experiment	GSE6148: The trans-differentiation of cultured Arabidopsis cells

Microarray experiments to specifically-expressed genes

GSM ID GSM142592 Assay name DB001_ATH1_A2-Brown-cal GSE experiment GSE6148: The trans-differentiation of cultured Arabidopsis cells

GSM ID GSM142592

Assay name DB001_ATH1_A2-Brown-cal

GSE experiment GSE6148: The trans-differentiation of cultured Arabidopsis cells