Microarray experiments to specifically-expressed genes

GSM ID GSM139897
Assay name WT_non-polysome_rep2
GSE experiment GSE6024: eif3h/WT polysome loading

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
19.599.6151.2At4g38840830039auxin-responsive protein, putativeF:molecular_function unknown;P:response to auxin stimulus, response to cold;C:plasma membrane;POO.I.C.G.H.G.
19.199.6230.5At4g33030829440SQD1involved in sulfolipid biosynthesisO.I.C.G.H.G.
15.799.554.2At1g70900843429unknown proteinF:molecular_function unknown;P:unknown;C:unknown;PO.I.C.G.H.G.
15.299.4270.4At2g14910815980unknown proteinF:unknown;P:unknown;C:chloroplast;BOPMO.I.C.G.H.G.
14.599.421.7At2g04790815022unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POO.I.C.G.H.G.
13.099.4410.0At3g16770820929ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN)Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.O.I.C.G.H.G.
12.899.31028.1At3g16640820916TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well.O.I.C.G.H.G.
12.099.3110.2At5g47435834791formyltetrahydrofolate deformylase, putativeencodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle.O.I.C.G.H.G.
11.499.353.0At4g12970826909unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
11.399.3625.7At3g12120820387FAD2 (FATTY ACID DESATURASE 2)Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5.O.I.C.G.H.G.
11.399.3445.9At5g41700834173UBC8 (UBIQUITIN CONJUGATING ENZYME 8)One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2O.I.C.G.H.G.
11.299.2102.5At1g68490843178unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G. protein, putativePutative auxin-regulated protein whose expression is downregulated in response to chitin oligomers.O.I.C.G.H.G. proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOO.I.C.G.H.G.
10.699.21185.5At3g54890824654LHCA1Encodes a component of the light harvesting complex associated with photosystem I.O.I.C.G.H.G.
10.399.290.5At2g46490819258unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO.I.C.G.H.G. (ARABIDOPSIS SKP1-LIKE 20)F:ubiquitin-protein ligase activity, protein binding;P:ubiquitin-dependent protein catabolic process;C:SCF ubiquitin ligase complex;MPOFBVO.I.C.G.H.G. proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;PO.I.C.G.H.G.
9.899.173.8At2g15580816051zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFBVO.I.C.G.H.G.
9.599.1611.3At1g23310838940GGT1 (GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE)Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway.O.I.C.G.H.G.
9.599.181.3At5g24800832549BZIP9 (BASIC LEUCINE ZIPPER 9)Encodes bZIP protein BZO2H2.O.I.C.G.H.G.
9.499.168.4At3g47295823883unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
9.399.11158.8At4g10340826626LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5)photosystem II encoding the light-harvesting chlorophyll a/b binding protein CP26 of the antenna system of the photosynthetic apparatusO.I.C.G.H.G. protein kinase activity;P:regulation of cell cycle;C:unknown;FOMPBO.I.C.G.H.G.
8.899.0641.6At4g34620829614SSR16 (SMALL SUBUNIT RIBOSOMAL PROTEIN 16)Encodes ribosomal protein S16, has embryo-defective lethal mutant phenotypeO.I.C.G.H.G.
8.899.039.1At4g17486827462unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.C.G.H.G.

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