Microarray experiments to specifically-expressed genes

GSM ID GSM136938
Assay name Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose
GSE experiment GSE5887: Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
93.9100.023.1PtpAffx.225250.1.S1_atpmrna44465hypothetical protein-3e-3At1g26400FAD-binding domain-containing proteinO.I.C.G.H.G.
93.9100.016.0PtpAffx.216844.1.S1_atpmrna31884hypothetical protein-4e-3At1g14550anionic peroxidase, putativeO.I.C.G.H.G.
93.8100.02.2PtpAffx.225199.1.S1_s_atpmrna44361hypothetical protein-2e+1At5g64400-O.I.C.G.H.G.
93.5100.02.7PtpAffx.225906.1.S1_s_atpmrna45554hypothetical protein-2e+1At5g38770AtGDU7 (Arabidopsis thaliana GLUTAMINE DUMPER 7)O.I.C.G.H.G.
93.3100.02.3PtpAffx.225365.1.S1_s_atpmrna44670hypothetical protein-2e+1At5g20060phospholipase/carboxylesterase family proteinO.I.C.G.H.G.
93.0100.02.5PtpAffx.208362.1.S1_s_atpmrna16630hypothetical protein-1e+1At4g39300unknown proteinO.I.C.G.H.G.
92.9100.02.6PtpAffx.225897.1.S1_s_atpmrna45544hypothetical protein-1e+1At5g56940ribosomal protein S16 family proteinO.I.C.G.H.G.
92.7100.02.5PtpAffx.222190.1.S1_s_atpmrna39444hypothetical protein-1e+1At4g39300unknown proteinO.I.C.G.H.G.
91.7100.02.5PtpAffx.225116.1.S1_s_atpmrna44225hypothetical protein-1e+1At4g39300unknown proteinO.I.C.G.H.G.
90.4100.018.0PtpAffx.138864.1.A1_atBP933694--6e-5At1g66950PDR11 (PLEIOTROPIC DRUG RESISTANCE 11)O.I.C.G.H.G.
90.3100.01.0PtpAffx.220130.1.S1_atpmrna36472hypothetical protein-1e-2At3g29590AT5MATO.I.C.G.H.G.
88.2100.08.4PtpAffx.225249.1.S1_s_atpmrna44464hypothetical protein-2e-4At5g44360FAD-binding domain-containing proteinO.I.C.G.H.G.
87.6100.01.2PtpAffx.207674.1.S1_atpmrna15237hypothetical protein-1e-3At3g55150ATEXO70H1 (exocyst subunit EXO70 family protein H1)O.I.C.G.H.G.
87.4100.00.8PtpAffx.2682.1.A1_atAY378089.1hypothetical protein-5e-1Atcg00070-O.I.C.G.H.G.
85.7100.02.4PtpAffx.200047.1.S1_atpmrna86hypothetical protein-3e-17At1g55230unknown proteinO.I.C.G.H.G.
85.4100.01.5PtpAffx.209333.1.S1_atpmrna18463hypothetical protein-9e-1At2g02300AtPP2-B5 (Phloem protein 2-B5)O.I.C.G.H.G.
84.5100.090.2PtpAffx.133781.1.A1_atCV262745aminophospholipid ATPase-7e-1At1g52630unknown proteinO.I.C.G.H.G.
83.6100.013.8PtpAffx.38964.2.S1_atCV256768hypothetical protein-2e-5At3g28580AAA-type ATPase family proteinO.I.C.G.H.G.
82.7100.00.5PtpAffx.206380.1.S1_atpmrna12672hypothetical protein-2e-13At5g57010calmodulin-binding family proteinO.I.C.G.H.G.
80.1100.00.2PtpAffx.203596.1.S1_atpmrna7139hypothetical protein-7e-5At1g16110WAKL6 (wall associated kinase-like 6)O.I.C.G.H.G.
80.0100.00.6PtpAffx.204851.1.S1_atpmrna9585hypothetical protein-1e-5At1g30370lipase class 3 family proteinO.I.C.G.H.G.
79.8100.023.9Ptp.4476.3.S1_atBP936133--4e-5At5g07440GDH2 (GLUTAMATE DEHYDROGENASE 2)O.I.C.G.H.G.
79.0100.017.1PtpAffx.22650.1.S1_atDN492997hypothetical protein-6e+0At1g08120-O.I.C.G.H.G.
77.2100.07.2PtpAffx.203790.1.S1_s_atpmrna7484hypothetical protein-2e-1At3g43150unknown proteinO.I.C.G.H.G.
77.0100.045.0PtpAffx.201744.1.S1_atpmrna3463hypothetical protein-3e+0At5g10780-O.I.C.G.H.G.
76.3100.06.2PtpAffx.62539.1.A1_atCV275545--1e-2At4g13390proline-rich extensin-like family proteinO.I.C.G.H.G.
75.7100.01.3PtpAffx.225232.1.S1_atpmrna44424hypothetical protein-2e-5At4g27290ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingO.I.C.G.H.G.
74.9100.00.1PtpAffx.202233.1.S1_atpmrna4481hypothetical protein-1e+0At1g10417-O.I.C.G.H.G.
74.8100.01.7PtpAffx.201201.1.S1_atpmrna2383hypothetical protein-1e+0At3g52950CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinO.I.C.G.H.G.
73.9100.047.8Ptp.3735.1.S1_s_atAJ776430hypothetical protein-1e+0At5g26100unknown proteinO.I.C.G.H.G.
73.9100.00.1PtpAffx.208918.1.S1_atpmrna17684hypothetical protein-5e-2At3g62650unknown proteinO.I.C.G.H.G.
73.7100.02.8PtpAffx.95259.1.A1_atCV254718ABC transporter family protein-3e-1At5g47520AtRABA5a (Arabidopsis Rab GTPase homolog A5a)O.I.C.G.H.G.
73.3100.011.8Ptp.7601.1.S1_s_atBU814226hypothetical protein-9e+0At5g06010unknown proteinO.I.C.G.H.G.
73.3100.05.4PtpAffx.121010.1.A1_atCV257240hypothetical protein-3e-2At3g59080aspartyl protease family proteinO.I.C.G.H.G.
72.9100.06.2PtpAffx.144197.2.A1_atCV240768--2e-1At2g06845beta-galactosidaseO.I.C.G.H.G.
72.8100.00.7PtpAffx.201310.1.S1_atpmrna2603cinnamyl alcohol dehydrogenase-like protein-4e-5At4g37970CAD6 (CINNAMYL ALCOHOL DEHYDROGENASE 6)O.I.C.G.H.G.
71.9100.00.1PtpAffx.212447.1.S1_atpmrna24385tir-nbs-lrr resistance protein-7e-2At4g16990RLM3 (RESISTANCE TO LEPTOSPHAERIA MACULANS 3)O.I.C.G.H.G.
71.7100.04.1PtpAffx.81893.1.A1_atCV268920AP2/ERF domain-containing transcription factor-2e-6At3g23240ERF1 (ETHYLENE RESPONSE FACTOR 1)O.I.C.G.H.G.
70.9100.02.9PtpAffx.119469.1.S1_atBP931170hypothetical protein-6e-4At4g11290peroxidase, putativeO.I.C.G.H.G.
70.8100.014.0PtpAffx.205330.1.S1_s_atpmrna10557hypothetical protein-9e-2At4g37150MES9 (METHYL ESTERASE 9)O.I.C.G.H.G.
69.9100.033.3PtpAffx.225543.1.S1_s_atpmrna44967hypothetical protein-8e-9At1g14550anionic peroxidase, putativeO.I.C.G.H.G.
69.7100.011.1PtpAffx.205377.1.S1_atpmrna10647cytochrome P450-8e-10At3g28740CYP81D1O.I.C.G.H.G.
69.5100.00.1PtpAffx.5326.3.S1_atCV259080cinnamoyl CoA reductase /// cinnamoyl CoA reductase /// cinnamoyl CoA reductase /// cinnamoyl CoA reductase /// cinnamoyl CoA reductase /// hypothetical protein /// hypothetical protein /// hypothetical protein-5e-13At1g80820CCR2 (CINNAMOYL COA REDUCTASE)O.I.C.G.H.G.
69.4100.023.0PtpAffx.16539.1.A1_s_atBP934558--4e+0At3g05500rubber elongation factor (REF) family proteinO.I.C.G.H.G.
69.2100.05.1PtpAffx.153422.1.A1_atCV257794--2e-1At3g22240unknown proteinO.I.C.G.H.G.
69.2100.03.3PtpAffx.204654.1.S1_atpmrna9156hypothetical protein-4e+0At4g02360unknown proteinO.I.C.G.H.G.
68.9100.00.2PtpAffx.207446.1.S1_atpmrna14786--2e-23At5g10530lectin protein kinase, putativeO.I.C.G.H.G.
68.5100.04.2PtpAffx.219713.1.S1_atpmrna35713hypothetical protein-5e-5At1g19250FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1)O.I.C.G.H.G.
68.4100.00.3PtpAffx.218966.1.S1_s_atpmrna34737GRAS domain protein /// GRAS domain protein /// hypothetical protein /// hypothetical protein /// hypothetical protein-4e+0At5g58640selenoprotein-relatedO.I.C.G.H.G.
68.2100.07.9PtpAffx.222624.1.S1_atpmrna40165hypothetical protein-1e+0At2g21160translocon-associated protein alpha (TRAP alpha) family proteinO.I.C.G.H.G.
67.9100.017.9Ptp.4476.3.S1_a_atBP936133--4e-5At5g07440GDH2 (GLUTAMATE DEHYDROGENASE 2)O.I.C.G.H.G.
67.2100.01.4PtpAffx.210671.1.S1_atpmrna20928hypothetical protein-3e-2At3g51040RTH (RTE1-HOMOLOG)O.I.C.G.H.G.
67.0100.046.8PtpAffx.224964.1.S1_atpmrna43908multicopper oxidase-2e-2At5g48100TT10 (TRANSPARENT TESTA 10)O.I.C.G.H.G.
66.6100.00.4PtpAffx.65495.1.S1_atDN488666hypothetical protein-1e+0At2g22510hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
66.5100.075.5PtpAffx.139572.1.S1_s_atCX178213hypothetical protein-1e+0At3g47470LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4)O.I.C.G.H.G.
66.3100.012.1PtpAffx.697.4.S1_a_atCV254473polyphenol oxidase-3e-1At3g62820invertase/pectin methylesterase inhibitor family proteinO.I.C.G.H.G.
66.2100.00.2PtpAffx.201160.1.S1_atpmrna2279hypothetical protein-2e-4At4g34131UGT73B3 (UDP-glucosyl transferase 73B3)O.I.C.G.H.G.
65.9100.025.2PtpAffx.224218.1.S1_atpmrna42563hypothetical protein-3e-6At5g44400FAD-binding domain-containing proteinO.I.C.G.H.G.
65.6100.01.4PtpAffx.205489.1.S1_s_atpmrna10854hypothetical protein-7e+0At5g17165unknown proteinO.I.C.G.H.G.
65.6100.01.4PtpAffx.205490.1.S1_atpmrna10855hypothetical protein-4e-1At2g22320unknown proteinO.I.C.G.H.G.
65.0100.00.1PtpAffx.91976.1.S1_atBU872837hypothetical protein-5e+0At5g08760unknown proteinO.I.C.G.H.G.
64.7100.07.0PtpAffx.63015.1.A1_atCV257634hypothetical protein-9e-2At1g18760zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
64.2100.05.2PtpAffx.224383.1.S1_atpmrna42862hypothetical protein-1e-5At5g08350GRAM domain-containing protein / ABA-responsive protein-relatedO.I.C.G.H.G.
64.0100.03.5PtpAffx.207075.1.S1_atpmrna14023amino acid transporter-8e-1At3g17780unknown proteinO.I.C.G.H.G.
63.5100.00.7PtpAffx.219238.1.S1_atpmrna35095hypothetical protein-6e-2At1g66700PXMT1O.I.C.G.H.G.
63.2100.028.0PtpAffx.107579.1.A1_atCV275356hypothetical protein-9e-9At5g44390FAD-binding domain-containing proteinO.I.C.G.H.G.
63.1100.00.9PtpAffx.222980.1.S1_atpmrna40734hypothetical protein-2e-1At4g04404zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
62.9100.07.4PtpAffx.100048.1.A1_atBP934827hypothetical protein-5e-6At2g15480UGT73B5 (UDP-glucosyl transferase 73B5)O.I.C.G.H.G.
62.3100.02.0PtpAffx.114045.1.A1_atCV273606hypothetical protein-1e+0At5g13570DCP2 (DECAPPING 2)O.I.C.G.H.G.
61.7100.041.4PtpAffx.16658.1.A1_atBI127627hypothetical protein-1e-4At3g01870unknown proteinO.I.C.G.H.G.
61.6100.05.9PtpAffx.222005.1.S1_s_atpmrna39194hypothetical protein-1e+0At2g04425LCR82 (Low-molecular-weight cysteine-rich 82)O.I.C.G.H.G.
61.6100.01.2PtpAffx.218018.1.S1_atpmrna33518flavonoid o-methyltransferase related-6e-4At3g1678060S ribosomal protein L19 (RPL19B)O.I.C.G.H.G.
61.4100.0186.9PtpAffx.218414.1.S1_atpmrna34020hypothetical protein-2e+0At5g26100unknown proteinO.I.C.G.H.G.
61.4100.00.1Ptp.3031.2.A1_atDN484744--4e+0At3g05500rubber elongation factor (REF) family proteinO.I.C.G.H.G.
60.6100.09.5PtpAffx.39946.1.S1_atCV254612--2e-20At5g53970aminotransferase, putativeO.I.C.G.H.G.
60.6100.03.5PtpAffx.30771.1.A1_atCV261923--1e+0At1g49005CLE11 (CLAVATA3/ESR-RELATED 11)O.I.C.G.H.G.
60.4100.00.6PtpAffx.205724.1.S1_s_atpmrna11296hypothetical protein-2e+0At4g30180transcription factor/ transcription regulatorO.I.C.G.H.G.
60.3100.01.6PtpAffx.88225.1.S1_atCV275599hypothetical protein-1e+0At3g21860ASK10 (ARABIDOPSIS SKP1-LIKE 10)O.I.C.G.H.G.
60.2100.02.3PtpAffx.208919.1.S1_atpmrna17686hypothetical protein-8e-3At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)O.I.C.G.H.G.
60.1100.06.0PtpAffx.208375.1.S1_atpmrna16658cytochrome P450-1e-2At5g10600CYP81K2O.I.C.G.H.G.
60.0100.028.9PtpAffx.204500.1.S1_atpmrna8828lysine/histidine transporter-2e-7At1g47670amino acid transporter family proteinO.I.C.G.H.G.
60.0100.00.5PtpAffx.221070.1.S1_atpmrna37642hypothetical protein-4e-2At2g28940protein kinase family proteinO.I.C.G.H.G.
59.3100.00.0PtpAffx.205847.1.S1_atpmrna11582hypothetical protein-8e-2At5g22520unknown proteinO.I.C.G.H.G.
59.2100.04.5PtpAffx.5078.7.A1_atCV275265hypothetical protein-8e-1At1g72920disease resistance protein (TIR-NBS class), putativeO.I.C.G.H.G.
59.2100.00.6PtpAffx.203382.1.S1_atpmrna6726hypothetical protein-2e-2At3g12600atnudt16 (Arabidopsis thaliana Nudix hydrolase homolog 16)O.I.C.G.H.G.
59.0100.00.5PtpAffx.224710.1.S1_s_atpmrna43522hypothetical protein-1e-12At1g11300ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingO.I.C.G.H.G.
58.4100.012.0PtpAffx.209542.1.S1_x_atpmrna18907hypothetical protein-5e-1At2g32200unknown proteinO.I.C.G.H.G.
58.1100.01.6PtpAffx.207961.1.S1_x_atpmrna15807hypothetical protein-2e-6At1g13470unknown proteinO.I.C.G.H.G.
57.4100.01.1PtpAffx.45541.3.A1_atBP932290--4e+0At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)O.I.C.G.H.G.
57.1100.025.1PtpAffx.202418.1.S1_atpmrna4854multidrug/pheromone exporter, MDR family, ABC transporter family-3e-24At3g62150PGP21 (P-GLYCOPROTEIN 21)O.I.C.G.H.G.
56.5100.01.7PtpAffx.37392.1.A1_atCV254143--3e+0At5g65870ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)O.I.C.G.H.G.
56.5100.00.1PtpAffx.224351.1.S1_atpmrna42817hypothetical protein-1e-3At1g61610S-locus lectin protein kinase family proteinO.I.C.G.H.G.
56.4100.00.2PtpAffx.200121.1.S1_atpmrna223hypothetical protein-2e-22At2g22590transferase, transferring glycosyl groupsO.I.C.G.H.G.
56.4100.00.2PtpAffx.214452.1.S1_atpmrna28100hypothetical protein-7e-27At2g24130leucine-rich repeat transmembrane protein kinase, putativeO.I.C.G.H.G.
56.2100.051.1PtpAffx.163562.1.S1_s_atBU820381hypothetical protein /// multicopper oxidase-1e+0At5g09360LAC14 (laccase 14)O.I.C.G.H.G.
56.0100.04.3PtpAffx.201939.1.S1_s_atpmrna3866hypothetical protein-2e-1At5g14440-O.I.C.G.H.G.
56.0100.00.1PtpAffx.206384.1.S1_atpmrna12680hypothetical protein-3e-18At5g56960basic helix-loop-helix (bHLH) family proteinO.I.C.G.H.G.
55.9100.00.1PtpAffx.225861.1.S1_x_atpmrna45493hypothetical protein-2e-2At3g12000S-locus related protein SLR1, putative (S1)O.I.C.G.H.G.
55.7100.0121.8PtpAffx.222219.1.S1_atpmrna39489--5e-3At3g22020-O.I.C.G.H.G.
55.3100.09.8PtpAffx.74993.1.S1_atCX656349hypothetical protein-4e-4At2g32020GCN5-related N-acetyltransferase (GNAT) family proteinO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage