Microarray experiments to specifically-expressed genes

GSM ID	GSM136936
Assay name	Poplar in 1 x hrp + 0.25 % sucrose no bacteria
GSE experiment	GSE5887: Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
94.1	100.0	124.3	PtpAffx.81137.1.S1_at	CV239049	hypothetical protein	-	4e-1	At3g62550	universal stress protein (USP) family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
94.0	100.0	3.7	PtpAffx.11535.7.A1_at	CV232884	hypothetical protein	-	2e+0	At1g09560	GLP5 (GERMIN-LIKE PROTEIN 5)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
91.5	100.0	15.0	PtpAffx.50239.1.A1_at	CV258028	-	-	2e-1	At5g09995	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
90.8	100.0	0.4	PtpAffx.210653.1.S1_at	pmrna20893	hypothetical protein	-	2e+0	At5g65880	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
89.8	100.0	2.0	PtpAffx.146514.1.A1_at	CV274174	-	-	1e-6	At1g07770	RPS15A (ribosomal protein s15a)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
89.6	100.0	1.3	PtpAffx.209321.1.S1_at	pmrna18419	hypothetical protein	-	1e-1	At2g37820	DC1 domain-containing protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
88.6	100.0	4.5	PtpAffx.103704.1.A1_at	CK095649	hypothetical protein	-	1e-34	At1g77120	ADH1 (ALCOHOL DEHYDROGENASE 1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
86.2	100.0	0.1	PtpAffx.225628.1.S1_at	pmrna45099	hypothetical protein	-	2e-3	At4g23150	protein kinase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
85.4	100.0	0.4	PtpAffx.158313.1.A1_at	BP930507	-	-	4e+0	At5g23130	peptidoglycan-binding LysM domain-containing protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
84.5	100.0	3.8	PtpAffx.160721.1.S1_at	AJ769720	hypothetical protein	-	2e-5	At5g10100	trehalose-6-phosphate phosphatase, putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
83.4	100.0	0.5	PtpAffx.114048.1.A1_at	CV273506	-	-	1e-19	At3g62250	UBQ5 (ubiquitin 5)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
83.4	100.0	0.3	PtpAffx.224720.1.S1_s_at	pmrna43532	hypothetical protein	-	2e-5	At1g11330	S-locus lectin protein kinase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
83.0	100.0	0.8	PtpAffx.94735.1.A1_at	CV273818	-	-	4e+0	At5g19030	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
82.7	100.0	0.3	PtpAffx.225112.1.S1_at	pmrna44216	hypothetical protein	-	1e-6	At5g59810	SBT5.4	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
82.6	100.0	29.3	PtpAffx.14147.1.S1_at	CV244771	-	-	4e-1	At3g26310	CYP71B35	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
82.3	100.0	0.5	PtpAffx.101192.1.A1_at	CV274118	-	-	7e+0	At5g05650	-	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
81.8	100.0	8.7	PtpAffx.145218.1.A1_at	BP936462	hypothetical protein	-	2e-3	At5g01330	PDC3 (pyruvate decarboxylase-3)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
81.6	100.0	0.1	PtpAffx.94727.1.A1_at	CV274161	-	-	3e+0	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
81.1	100.0	3.6	PtpAffx.25530.1.S1_at	CV274786	hypothetical protein	-	1e+0	At2g03420	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
79.6	100.0	14.1	PtpAffx.201195.1.S1_at	pmrna2363	hypothetical protein	-	8e-6	At2g17150	RWP-RK domain-containing protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
79.6	100.0	9.9	PtpAffx.30032.2.S1_at	CX177019	-	-	3e-4	At4g38470	protein kinase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
78.0	100.0	0.1	PtpAffx.200435.1.S1_at	pmrna874	hypothetical protein	-	6e-1	At2g47690	NADH-ubiquinone oxidoreductase-related	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
77.8	100.0	9.7	PtpAffx.200538.1.S1_at	pmrna1071	hypothetical protein	-	7e-1	At4g24310	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
77.3	100.0	0.7	PtpAffx.69205.1.A1_at	CV266595	hypothetical protein	-	2e+0	At1g50575	lysine decarboxylase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
77.3	100.0	0.2	PtpAffx.150914.1.S1_at	CN519873	-	-	4e-45	At4g35790	ATPLDDELTA	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
76.9	100.0	0.4	PtpAffx.60076.2.A1_at	CV265013	hypothetical protein	-	4e-1	At4g12300	CYP706A4	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
76.4	100.0	0.8	PtpAffx.224340.1.S1_at	pmrna42800	hypothetical protein	-	1e-14	At4g08780	peroxidase, putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
75.1	100.0	0.9	PtpAffx.802.2.S1_at	CV272843	-	-	1e-3	At5g40070	-	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
74.9	100.0	1.9	PtpAffx.204737.1.S1_at	pmrna9323	hypothetical protein	-	2e-14	At2g17150	RWP-RK domain-containing protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
74.7	100.0	2.0	PtpAffx.19956.2.S1_at	CV251106	-	-	1e-28	At4g39770	trehalose-6-phosphate phosphatase, putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
74.3	100.0	4.3	PtpAffx.213177.1.S1_s_at	pmrna25777	hypothetical protein	-	9e-1	At5g57760	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
74.0	100.0	9.7	PtpAffx.206000.1.S1_at	pmrna11899	hypothetical protein	-	1e+0	At5g47650	ATNUDT2 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 2)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
72.9	100.0	19.8	PtpAffx.15038.1.A1_at	CV266349	hypothetical protein	-	4e+0	At3g43290	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
72.6	100.0	1.4	PtpAffx.203277.1.S1_at	pmrna6496	hypothetical protein	-	1e-3	At1g64160	disease resistance-responsive family protein / dirigent family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
71.6	100.0	0.8	Ptp.3680.1.S1_at	CV244042	-	-	2e-2	At4g31380	FLP1 (FPF1-LIKE PROTEIN 1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
71.5	100.0	1.7	PtpAffx.100742.1.S1_at	CV242765	-	-	4e-1	At4g10270	wound-responsive family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
71.2	100.0	6.8	PtpAffx.161390.1.S1_at	CK103928	-	-	4e+0	At5g59560	SRR1 (SENSITIVITY TO RED LIGHT REDUCED 1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
71.0	100.0	42.2	PtpAffx.134631.1.A1_at	CV228409	-	-	2e-1	At2g04925	-	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
70.4	100.0	7.5	PtpAffx.213177.1.S1_at	pmrna25777	hypothetical protein	-	9e-1	At5g57760	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
69.8	100.0	61.5	PtpAffx.249.133.S1_a_at	CK320182	stress-induced hydrophobic peptide	-	5e-9	At3g05880	RCI2A (RARE-COLD-INDUCIBLE 2A)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
68.3	100.0	6.9	PtpAffx.202990.1.S1_at	pmrna5917	hypothetical protein	-	6e-4	At1g53940	GLIP2	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
67.8	100.0	11.9	PtpAffx.146934.1.A1_at	CV271907	hypothetical protein	-	9e-1	At2g24800	peroxidase, putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
67.6	100.0	15.0	PtpAffx.56606.1.A1_at	CV261642	-	-	4e+0	At5g52690	heavy-metal-associated domain-containing protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
67.5	100.0	0.0	PtpAffx.205488.1.S1_at	pmrna10852	hypothetical protein	-	3e-52	At1g78050	PGM (PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
67.3	100.0	2.6	PtpAffx.203.3.A1_at	CV269424	hypothetical protein	-	3e-1	At3g50960	PLP3a (Phosducin-like protein 3 homolog)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
67.3	100.0	0.2	PtpAffx.200319.1.S1_at	pmrna634	aminophospholipid ATPase	-	3e-14	At1g17500	ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
67.2	100.0	5.1	PtpAffx.210053.1.S1_x_at	pmrna19804	hypothetical protein	-	1e-53	At5g54840	SGP1	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
67.2	100.0	0.5	PtpAffx.206046.1.S1_s_at	pmrna11983	hypothetical protein	-	3e-1	At2g14890	AGP9 (ARABINOGALACTAN PROTEIN 9)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
66.8	100.0	1.9	PtpAffx.203139.1.S1_at	pmrna6223	hypothetical protein	-	6e-8	At5g45275	-	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
66.7	100.0	1.4	PtpAffx.127478.1.A1_at	CV256390	-	-	3e-8	At4g21390	B120	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
66.5	100.0	7.6	PtpAffx.14188.1.A1_at	CV275407	hypothetical protein	-	2e-5	At2g21045	-	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
65.7	100.0	7.1	PtpAffx.132310.1.A1_at	BP935067	-	-	3e+0	Atcg00330	-	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
65.3	100.0	0.0	PtpAffx.127035.1.A1_at	CV274016	-	-	4e+0	At5g05590	PAI2 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 2)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
64.8	100.0	22.2	PtpAffx.203638.1.S1_at	pmrna7218	hypothetical protein	-	3e-8	At5g19870	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
64.2	100.0	0.1	Ptp.3716.2.S1_s_at	DN491478	AP2/ERF domain-containing transcription factor	-	9e-2	At4g10600	PHD finger family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
63.8	100.0	5.9	PtpAffx.209860.1.S1_s_at	pmrna19434	hypothetical protein	-	1e-1	At1g73165	CLE1 (CLAVATA3/ESR-RELATED 1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
62.8	100.0	0.2	PtpAffx.150244.1.S1_at	BU871495	-	-	4e-1	At3g44940	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
62.5	100.0	0.0	PtpAffx.213385.1.S1_at	pmrna26192	hypothetical protein	-	4e+0	At2g06166	-	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
62.2	100.0	9.0	PtpAffx.15748.2.S1_at	CV255924	-	-	3e+0	At2g40410	Ca(2+)-dependent nuclease, putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
61.9	100.0	0.1	PtpAffx.7708.1.A1_at	CV272946	-	-	2e+0	At1g63855	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
61.8	100.0	43.4	PtpAffx.28893.1.A1_at	CV275688	hypothetical protein	-	2e-4	At4g13010	oxidoreductase, zinc-binding dehydrogenase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
61.6	100.0	3.8	PtpAffx.987.1.S1_at	CV257839	hypothetical protein	-	2e+0	At1g33840	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
61.6	100.0	3.1	PtpAffx.208104.1.S1_at	pmrna16098	hypothetical protein	-	6e-125	At5g17330	GAD	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
61.4	100.0	36.6	PtpAffx.88710.1.A1_at	CV255755	hypothetical protein	-	4e-1	At1g28100	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
61.1	100.0	25.9	PtpAffx.108366.1.A1_at	CV243401	hypothetical protein	-	8e-1	At5g59140	SKP1 family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
61.0	100.0	0.5	PtpAffx.4337.4.A1_at	BU877213	hypothetical protein	-	2e-5	At4g27450	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
60.3	100.0	5.1	PtpAffx.210053.1.S1_at	pmrna19804	hypothetical protein	-	1e-53	At5g54840	SGP1	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
60.2	100.0	0.2	PtpAffx.14205.1.S1_at	CA823129	-	-	3e+0	At3g16820	F-box family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
60.0	100.0	0.1	PtpAffx.207868.1.S1_at	pmrna15618	hypothetical protein	-	4e-2	At5g15470	GAUT14 (Galacturonosyltransferase 14)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
59.7	100.0	0.5	PtpAffx.203235.1.S1_at	pmrna6409	hypothetical protein	-	1e+0	At3g14260	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
59.5	100.0	11.1	PtpAffx.119396.1.A1_at	CV266382	hypothetical protein	-	1e+0	At3g49570	LSU3 (RESPONSE TO LOW SULFUR 3)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
59.5	100.0	0.1	PtpAffx.202989.1.S1_s_at	pmrna5912	SAUR family protein	-	1e+0	At4g16810	-	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
59.3	100.0	4.5	PtpAffx.215144.1.S1_at	pmrna29173	hypothetical protein	-	3e+0	At5g63440	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
58.9	100.0	0.5	PtpAffx.152340.1.S1_at	CN522546	hypothetical protein	-	1e-41	At5g07440	GDH2 (GLUTAMATE DEHYDROGENASE 2)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
58.6	100.0	1.2	PtpAffx.25648.2.A1_at	CV230643	hypothetical protein	-	6e-14	At4g02280	SUS3 (sucrose synthase 3)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
58.4	100.0	0.1	PtpAffx.11202.1.A1_at	CV275295	-	-	3e-4	At2g34480	60S ribosomal protein L18A (RPL18aB)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
58.3	100.0	26.9	PtpAffx.209452.1.S1_at	pmrna18727	hypothetical protein	-	2e-8	At3g29034	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
58.3	100.0	0.0	PtpAffx.209907.1.S1_at	pmrna19522	hypothetical protein	-	9e-1	At2g42940	DNA-binding family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
58.1	100.0	0.6	PtpAffx.225669.1.S1_at	pmrna45183	hypothetical protein	-	2e+0	At3g61678	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
57.4	100.0	0.4	PtpAffx.692.2.S2_at	CV274106	hypothetical protein	-	1e-7	At1g19397	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
57.2	100.0	2.3	PtpAffx.3440.1.S1_at	DN491110	-	-	2e+0	At4g24640	APPB1	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
57.0	100.0	4.0	PtpAffx.142471.1.A1_s_at	CK095710	hypothetical protein	-	2e+0	At4g16930	disease resistance protein (TIR-NBS-LRR class), putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
56.7	100.0	5.7	PtpAffx.33551.1.S1_at	CV239425	hypothetical protein	-	1e-13	At1g67090	RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
56.2	100.0	0.1	PtpAffx.30459.1.A1_at	CV275249	-	-	3e+0	At4g05631	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
55.8	100.0	0.1	PtpAffx.158211.1.S1_at	CN549479	hypothetical protein	-	5e+0	At3g24450	copper-binding family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
55.7	100.0	3.6	PtpAffx.249.171.A1_at	CV275381	-	-	6e-2	At2g01150	RHA2B (RING-H2 FINGER PROTEIN 2B)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
54.6	100.0	0.5	PtpAffx.209512.1.S1_at	pmrna18846	hypothetical protein	-	1e+0	At4g24350	phosphorylase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
54.6	100.0	0.1	PtpAffx.217585.1.S1_at	pmrna32914	hypothetical protein	-	4e-36	At5g57620	MYB36 (myb domain protein 36)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
54.3	100.0	0.1	PtpAffx.128159.1.S1_at	CV229156	-	-	1e-5	At1g73340	electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
54.0	100.0	2.6	PtpAffx.95933.1.A1_at	CV227042	-	-	3e-1	At5g23090	NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
53.8	100.0	1.4	PtpAffx.55783.1.A1_at	CX175107	-	-	1e+0	Atcg00540	-	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
53.6	100.0	0.3	PtpAffx.88270.1.A1_at	CV274076	-	-	1e-1	At1g08080	ACA7 (ALPHA CARBONIC ANHYDRASE 7)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
53.1	100.0	3.2	PtpAffx.210801.1.S1_at	pmrna21209	hypothetical protein	-	4e+0	At5g05770	WOX7 (WUSCHEL-RELATED HOMEOBOX 7)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
53.0	100.0	69.1	PtpAffx.23562.1.S1_at	CV271251	hypothetical protein	-	5e+0	At5g38140	NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
52.4	100.0	12.3	PtpAffx.216037.1.S1_at	pmrna30586	hypothetical protein	-	2e-1	At1g21326	VQ motif-containing protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
52.3	100.0	6.5	PtpAffx.71071.1.S1_s_at	AJ777574	hypothetical protein	-	6e-15	At1g22170	phosphoglycerate/bisphosphoglycerate mutase family protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
52.2	100.0	0.8	PtpAffx.18295.5.S1_a_at	CK114049	hypothetical protein	-	1e-19	At3g04120	GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
52.1	100.0	0.2	PtpAffx.212405.1.S1_at	pmrna24300	AP2/ERF domain-containing transcription factor	-	1e-8	At1g12890	AP2 domain-containing transcription factor, putative	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
51.8	100.0	22.7	PtpAffx.4884.1.S1_at	CV255067	hypothetical protein	-	1e+0	At4g00210	LBD31 (LOB DOMAIN-CONTAINING PROTEIN 31)	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)
51.3	100.0	1.3	PtpAffx.114753.2.S1_at	CX171808	hypothetical protein	-	3e-1	At3g52040	unknown protein	O.I.	C.G.	H.G.	Please selecteFP Browser (expression)

Back to the CoP portal site

Back to the KAGIANA project homepage