Microarray experiments to specifically-expressed genes

GSM ID GSM134450
Assay name St.Clair_1-75_376_Mt-0_0.02%-silwet_Rep3_ATH1
GSE experiment GSE5758: Expression Level Polymorphism Project (ELP) - Mt-0

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
41.899.834.3At5g55420835635-Encodes a Protease inhibitor/seed storage/LTP family protein [pseudogene]O.I.C.G.H.G.
27.999.722.1At1g31680--O.I.C.G.H.G.
26.999.7154.7At2g03760814903STEncodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.O.I.C.G.H.G.
24.199.6123.3At5g434508343652-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to ACC oxidaseO.I.C.G.H.G.
22.499.665.8At3g48850824046mitochondrial phosphate transporter, putativeF:binding;P:transport;C:mitochondrial inner membrane, chloroplast, membrane;MFPOO.I.C.G.H.G.
19.799.623.5At5g438003771423transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
19.299.630.1At1g51920841620unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
18.499.581.9At4g27585828868band 7 family proteinF:unknown;P:biological_process unknown;C:mitochondrion, plastid, membrane;BOMPAFVO.I.C.G.H.G.
17.299.537.8At5g44570834484unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
16.399.549.5At1g31690840056amine oxidase/ copper ion binding / quinone bindingF:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPAO.I.C.G.H.G.
16.399.57.5At4g16900827399ATP binding / protein binding / transmembrane receptorF:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMOBFVAO.I.C.G.H.G.
15.399.4109.7At1g05680837075UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFO.I.C.G.H.G.
14.799.4165.9At2g41730818772unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
14.799.422.1At4g11370826739RHA1AEncodes a putative RING-H2 finger protein RHA1a.O.I.C.G.H.G.
14.699.477.5At1g15520838122PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)ABC transporter family involved in resistant to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers. Not expressed in roots.O.I.C.G.H.G.
13.799.419.0At5g01550831700LECRKA4.2 (LECTIN RECEPTOR KINASE A4.1)Encodes LecRKA4.2, a member of the lectin receptor kinase subfamily A4 (LecRKA4.1 At5g01540; LecRKA4.2 At5g01550; LecRKA4.3 At5g01560). Together with other members of the subfamily, functions redundantly in the negative regulation of ABA response in seed germination.O.I.C.G.H.G.
13.599.489.5At3g57240824891BG3 (BETA-1,3-GLUCANASE 3)encodes a member of glycosyl hydrolase family 17O.I.C.G.H.G.
13.499.429.0At1g78450844181SOUL heme-binding family proteinF:binding;P:biological_process unknown;C:endomembrane system;OMPBAO.I.C.G.H.G.
13.299.485.7At1g52410841671TSA1 (TSK-ASSOCIATING PROTEIN 1)Contains a novel calcium-binding repeat sequence. Binds TSK in vitro. Localizes to small cytoplasmic vesicles in interphase cells. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis. May be involved in mitosis together with TSK. Expressed preferentially in the flower and shoot apex. Can form multimers.O.I.C.G.H.G.
13.299.454.9At1g32940840188SBT3.5F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFMO.I.C.G.H.G.
13.099.433.9At2g20720816600pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
12.499.372.4At4g17260827440L-lactate dehydrogenase, putativeF:in 6 functions;P:response to salt stress, response to abscisic acid stimulus;C:plasma membrane;BOMFPAO.I.C.G.H.G.
12.499.323.3At4g04490825779protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
12.199.349.5At5g38900833882DSBA oxidoreductase family proteinF:protein disulfide oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;BOFPMAO.I.C.G.H.G.
11.699.365.3At2g30770817628CYP71A13 (cytochrome P450, family 71, subfamily A, polypeptide 13)putative cytochrome P450O.I.C.G.H.G.
11.499.3107.5At3g26830822298PAD3 (PHYTOALEXIN DEFICIENT 3)Mutations in pad3 are defective in biosynthesis of the indole derived phytoalexin camalexin. Encodes a cytochrome P450 enzyme that catalyzes the conversion of dihydrocamalexic acid to camalexin.O.I.C.G.H.G.
11.199.294.6At3g51450824308strictosidine synthase family proteinF:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;BPMOAFO.I.C.G.H.G.
11.099.262.8At1g13470837907unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
10.999.230.5At4g03450827913ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOPFBVAO.I.C.G.H.G.
10.799.230.5At2g23480816880transposable element geneF:unknown;P:unknown;C:unknownO.I.C.G.H.G.
10.699.2131.4At3g28220822448meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:response to salt stress;C:vacuole, chloroplast envelope;PMOO.I.C.G.H.G.
10.499.2122.3At3g48640824024unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
10.399.292.4At2g47000819314ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4)Multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above.O.I.C.G.H.G.
10.399.291.3At2g40750818670WRKY54member of WRKY Transcription Factor; Group IIIO.I.C.G.H.G.
10.399.252.8At2g21640816702-Encodes a protein of unknown function that is a marker for oxidative stress response.O.I.C.G.H.G.
10.299.219.1At1g32960840190SBT3.3F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast, plant-type cell wall;BPOAFMO.I.C.G.H.G.
10.199.242.4At1g23850838996unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
10.199.227.9At1g32870840181ANAC13 (Arabidopsis thaliana NAC domain protein 13)F:transcription factor activity;P:multicellular organismal development, response to UV-B, response to red light;C:cellular_component unknown;POMFO.I.C.G.H.G.
9.999.142.8At2g39920818579acid phosphatase class B family proteinF:acid phosphatase activity;P:response to cadmium ion;C:cellular_component unknown;PBOO.I.C.G.H.G.
9.899.155.2At5g51830835258pfkB-type carbohydrate kinase family proteinF:kinase activity, ribokinase activity;P:response to cadmium ion;C:cellular_component unknown;BOPAMFO.I.C.G.H.G.
9.899.148.4At5g62480836368ATGSTU9 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 9)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
9.699.165.1At1g64900842798CYP89A2 (CYTOCHROME P450 89A2)Encodes cytochrome P450 (CYP89A2).O.I.C.G.H.G.
9.699.135.5At1g14230837984nucleoside phosphatase family protein / GDA1/CD39 family proteinF:hydrolase activity;P:unknown;C:unknown;MFPOBO.I.C.G.H.G.
9.499.161.7At1g22070838812TGA3Encodes a transcription factor. Like other TGAla-related factors, TGA3 has a highly conserved bZIP region and exhibits similar DNA-binding properties.O.I.C.G.H.G.
9.399.1105.8At5g13200831159GRAM domain-containing protein / ABA-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
9.299.192.4At4g37370829891CYP81D8member of CYP81DO.I.C.G.H.G.
9.099.1161.2At5g26340832703MSS1Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.O.I.C.G.H.G.
8.899.0175.9At5g42650834273AOS (ALLENE OXIDE SYNTHASE)Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.O.I.C.G.H.G.
8.699.039.3At3g25610822148haloacid dehalogenase-like hydrolase family proteinF:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;P:metabolic process, phospholipid transport, ATP biosynthetic process;C:plasma membrane;MBOFPAVO.I.C.G.H.G.



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