CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133964

Assay name Fukuda_1-9_8A_Rep1_ATH1

GSE experiment GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
603.0 100.0 156.0 At5g59700 836091 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
486.9 100.0 162.6 At1g70500 843386 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
451.1 100.0 158.9 At1g24030 839015 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
346.8 100.0 43.9 At5g56370 835738 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
305.7 100.0 83.4 At2g38320 818412 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PMO O.I. C.G. H.G.
303.2 100.0 141.2 At1g23460 838954 polygalacturonase F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
272.0 100.0 88.1 At1g75520 843888 SRS5 (SHI-RELATED SEQUENCE 5) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. O.I. C.G. H.G.
266.8 100.0 62.5 At1g10800 837623 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
259.7 100.0 105.4 At1g67600 843081 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOP O.I. C.G. H.G.
251.9 100.0 77.5 At5g01930 831699 (1-4)-beta-mannan endohydrolase, putative F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOA O.I. C.G. H.G.
250.0 100.0 143.1 At1g68810 843213 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOB O.I. C.G. H.G.
220.5 100.0 192.6 At5g13300 831171 SFC (SCARFACE) Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin. O.I. C.G. H.G.
218.0 100.0 107.3 At4g08160 826365 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein Encodes a putative glycosyl hydrolase family 10 protein (xylanase). O.I. C.G. H.G.
217.5 100.0 77.1 At5g12350 831110 Ran GTPase binding / chromatin binding / zinc ion binding F:chromatin binding, zinc ion binding, Ran GTPase binding;P:unknown;C:plasma membrane;MOBPFAV O.I. C.G. H.G.
214.5 100.0 107.1 At1g67420 843062 peptidase F:peptidase activity;P:proteolysis;C:endomembrane system;MBFOPA O.I. C.G. H.G.
200.1 100.0 204.2 At5g18830 832001 SPL7 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7) Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c. O.I. C.G. H.G.
195.4 100.0 88.4 At2g34790 818044 MEE23 (MATERNAL EFFECT EMBRYO ARREST 23) F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:embryonic development ending in seed dormancy, polar nucleus fusion;C:cell wall;BFPOAM O.I. C.G. H.G.
192.7 100.0 102.4 At5g65970 836727 MLO10 (MILDEW RESISTANCE LOCUS O 10) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s O.I. C.G. H.G.
187.4 100.0 65.2 At3g47950 823950 AHA4 mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase O.I. C.G. H.G.
182.8 100.0 135.0 At1g67620 843083 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMP O.I. C.G. H.G.
181.8 100.0 37.6 At3g04420 819597 anac048 (Arabidopsis NAC domain containing protein 48) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO O.I. C.G. H.G.
172.1 100.0 125.2 At5g07080 830599 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO O.I. C.G. H.G.
163.2 99.9 194.7 At2g03200 814849 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFMO O.I. C.G. H.G.
158.5 99.9 50.0 At1g69430 843275 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
158.1 99.9 223.1 At5g13330 831174 Rap2.6L (related to AP2 6L) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. O.I. C.G. H.G.
153.8 99.9 34.3 At1g50150 - - O.I. C.G. H.G.
153.2 99.9 106.4 At5g12400 831115 PHD finger transcription factor, putative F:protein binding, DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPOFB O.I. C.G. H.G.
152.4 99.9 275.3 At2g38080 818386 IRX12 (IRREGULAR XYLEM 12) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype. O.I. C.G. H.G.
152.2 99.9 43.3 At5g08600 830761 U3 ribonucleoprotein (Utp) family protein F:molecular_function unknown;P:rRNA processing;C:small-subunit processome;OMFBPVA O.I. C.G. H.G.
152.0 99.9 75.6 At1g49980 841422 DNA-directed DNA polymerase/ damaged DNA binding F:damaged DNA binding, DNA-directed DNA polymerase activity;P:DNA repair;C:membrane;BOMFAP O.I. C.G. H.G.
151.9 99.9 44.3 At1g71930 843524 VND7 (VASCULAR RELATED NAC-DOMAIN PROTEIN 7) Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids. O.I. C.G. H.G.
150.0 99.9 307.4 At1g63120 842616 ATRBL2 (Arabidopsis thaliana Rhomboid-like 2) AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein. O.I. C.G. H.G.
149.2 99.9 122.0 At1g50240 841446 - - O.I. C.G. H.G.
148.9 99.9 81.4 At5g51500 835224 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
145.5 99.9 100.1 At3g48185 823974 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
143.9 99.9 42.0 At5g25290 832601 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
137.7 99.9 48.1 At3g26850 822300 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOV O.I. C.G. H.G.
133.9 99.9 74.7 At1g69360 843268 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF O.I. C.G. H.G.
133.0 99.9 45.2 At4g29230 829044 anac075 (Arabidopsis NAC domain containing protein 75) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOFBV O.I. C.G. H.G.
132.7 99.9 53.1 At3g26680 822280 SNM1 (SENSITIVE TO NITROGEN MUSTARD 1) involved in a SNM-dependent recombinational repair process of oxidatively induced DNA damage. O.I. C.G. H.G.
132.7 99.9 36.4 At1g67370 843058 ASY1 (ASYNAPTIC 1) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal. O.I. C.G. H.G.
132.4 99.9 144.0 At1g50120 841434 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO O.I. C.G. H.G.
131.8 99.9 218.1 At5g26270 832696 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MP O.I. C.G. H.G.
131.1 99.9 157.3 At5g60020 836124 LAC17 (laccase 17) putative laccase, a member of laccase family of genes (17 members in Arabidopsis). O.I. C.G. H.G.
128.2 99.9 60.0 At2g04230 814960 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
126.2 99.9 185.5 At3g21550 821709 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
119.7 99.9 30.3 At1g77655 844101 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
119.4 99.9 119.2 At5g18780 831996 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
117.8 99.9 44.8 At1g43590 840943 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
116.9 99.9 107.7 At5g03260 831887 LAC11 (laccase 11) putative laccase, a member of laccase family of genes (17 members in Arabidopsis). O.I. C.G. H.G.
116.6 99.9 25.7 At4g05370 825885 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
116.5 99.9 179.8 At5g08500 830749 transmembrane CLPTM1 family protein F:unknown;P:biological_process unknown;C:unknown;MOFP O.I. C.G. H.G.
114.3 99.9 62.8 At1g17960 838375 threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative F:nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding;P:threonyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation;C:cytoplasm;BOMFAP O.I. C.G. H.G.
114.1 99.9 55.2 At5g12870 831127 MYB46 (MYB DOMAIN PROTEIN 46) Member of the R2R3 factor gene family. O.I. C.G. H.G.
112.7 99.9 122.4 At1g67320 843052 DNA primase, large subunit family F:DNA primase activity;P:DNA replication, synthesis of RNA primer;C:alpha DNA polymerase:primase complex;MFOPA O.I. C.G. H.G.
111.6 99.9 104.4 At4g32880 829424 ATHB-8 (HOMEOBOX GENE 8) member of homeodomain-leucine zipper family, acting as a differentiation-promoting transcription factor of the vascular meristems. O.I. C.G. H.G.
110.0 99.9 35.0 At1g50700 841492 CPK33 member of Calcium Dependent Protein Kinase O.I. C.G. H.G.
109.0 99.9 57.2 At1g67410 843061 exostosin family protein F:catalytic activity;P:biological_process unknown;C:endomembrane system, membrane;PMOBF O.I. C.G. H.G.
106.8 99.9 24.0 At1g76250 843958 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;POM O.I. C.G. H.G.
106.6 99.9 57.6 At1g47230 841126 cyclin, putative F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFV O.I. C.G. H.G.
105.5 99.9 29.6 At1g63520 842657 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
105.3 99.9 28.7 At5g19870 832108 unknown protein F:unknown;P:unknown;C:endomembrane system;MP O.I. C.G. H.G.
104.4 99.9 89.7 At1g55760 842025 BTB/POZ domain-containing protein F:protein binding;P:biological_process unknown;C:unknown;MPOVF O.I. C.G. H.G.
104.1 99.9 83.2 At1g50140 841436 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
102.8 99.9 29.5 At5g08480 830747 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
101.9 99.9 60.7 At1g47410 841146 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
101.2 99.9 212.2 At1g26820 839225 RNS3 (RIBONUCLEASE 3) Encodes ribonuclease RNS3. O.I. C.G. H.G.
101.1 99.9 29.9 At1g62700 842568 ANAC026 Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. O.I. C.G. H.G.
100.7 99.9 64.2 At5g16490 831510 RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. Protein most similar to RIC2 (family subgroup V). Gene is expressed in all tissues examined.Interacts with ROP2 during pavement cell morphogenesis and with ROP1 to promote apical F-actin assembly. O.I. C.G. H.G.
100.5 99.9 29.7 At1g12260 837780 ANAC007 (ARABIDOPSIS NAC 007) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. O.I. C.G. H.G.
99.0 99.9 57.7 At5g58520 835965 protein kinase family protein F:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVA O.I. C.G. H.G.
97.9 99.9 86.4 At1g72740 843606 DNA-binding family protein / histone H1/H5 family protein F:transcription factor activity;P:nucleosome assembly, regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
96.9 99.9 98.2 At1g71940 843525 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPFA O.I. C.G. H.G.
95.7 99.9 102.5 At1g49950 841418 DNA-binding protein, putative Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats. O.I. C.G. H.G.
95.0 99.9 122.2 At1g72830 843614 NF-YA3 (NUCLEAR FACTOR Y, SUBUNIT A3) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. O.I. C.G. H.G.
95.0 99.9 60.5 At2g38340 818414 AP2 domain-containing transcription factor, putative (DRE2B) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. O.I. C.G. H.G.
94.8 99.9 137.0 At5g18850 832003 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
94.2 99.9 90.7 At2g37090 818285 IRX9 (IRREGULAR XYLEM 9) The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis. O.I. C.G. H.G.
93.6 99.9 56.5 At5g26330 832702 plastocyanin-like domain-containing protein / mavicyanin, putative F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PF O.I. C.G. H.G.
93.1 99.9 52.1 At5g18770 831995 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
92.1 99.9 88.8 At5g40020 833999 pathogenesis-related thaumatin family protein F:molecular_function unknown;P:response to other organism;C:endomembrane system;PFMBO O.I. C.G. H.G.
92.0 99.9 67.6 At1g67570 843078 unknown protein F:unknown;P:unknown;C:nucleus;PO O.I. C.G. H.G.
91.9 99.9 31.2 At5g11540 831026 FAD-binding domain-containing protein F:D-arabinono-1,4-lactone oxidase activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system, membrane;BOFMPA O.I. C.G. H.G.
91.8 99.9 30.6 At4g00220 828084 JLO (JAGGED LATERAL ORGANS) Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves. O.I. C.G. H.G.
91.5 99.9 164.2 At1g30270 839907 CIPK23 (CBL-INTERACTING PROTEIN KINASE 23) Arabidopsis thaliana CBL-interacting protein kinase 23. CIPK23 serves as a positive regulator of the potassium transporter AKT1 by directly phosphorylates AKT1. CIPK23 is activated by the binding of two calcineurin B-like proteins, CBL1 and CBL9. O.I. C.G. H.G.
91.4 99.9 72.1 At5g58980 836015 ceramidase family protein F:ceramidase activity;P:biological_process unknown;C:endomembrane system;MBFOP O.I. C.G. H.G.
90.8 99.9 97.3 At5g59710 836092 VIP2 (VIRE2 INTERACTING PROTEIN2) Encodes a nuclear-localized NOT (negative on TATA-less) domain-containing protein that interacts with the Agrobacterium VirE2 protein and is required for Agrobacterium-mediated plant transformation. It likely facilitates T-DNA integration into plant chromosomes and may play a role as a transcriptional regulator. O.I. C.G. H.G.
90.4 99.9 90.8 At5g12290 831104 DGS1 (DGD1 SUPPRESSOR 1) Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background. O.I. C.G. H.G.
89.9 99.9 80.1 At1g69570 843293 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;POMFB O.I. C.G. H.G.
88.8 99.9 23.8 At2g46760 819289 FAD-binding domain-containing protein F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:membrane;BOFPMA O.I. C.G. H.G.
87.8 99.9 61.9 At5g12260 831101 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFB O.I. C.G. H.G.
87.2 99.9 92.6 At1g14130 837972 2-oxoglutarate-dependent dioxygenase, putative F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:nucleus;POBFM O.I. C.G. H.G.
86.9 99.9 64.1 At5g24500 832521 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPF O.I. C.G. H.G.
86.8 99.9 30.0 At5g07060 830597 zinc finger (CCCH-type) family protein F:RNA binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;FMOPV O.I. C.G. H.G.
85.6 99.9 140.6 At5g19530 832073 ACL5 (ACAULIS 5) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function. O.I. C.G. H.G.
85.3 99.9 123.8 At1g78780 844214 pathogenesis-related family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFM O.I. C.G. H.G.
84.6 99.9 66.7 At5g58500 835963 LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5) F:molecular_function unknown;P:biological_process unknown;C:unknown;PM O.I. C.G. H.G.
82.8 99.9 54.5 At5g08565 830757 positive transcription elongation factor/ zinc ion binding F:positive transcription elongation factor activity, zinc ion binding;P:positive regulation of transcription;C:nucleus;MFOP O.I. C.G. H.G.
81.7 99.9 28.7 At3g43690 3769597 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
81.3 99.9 75.8 At2g03220 814851 FT1 (FUCOSYLTRANSFERASE 1) member of Glycosyltransferase Family- 37 O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
603.0	100.0	156.0	At5g59700	836091	protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
486.9	100.0	162.6	At1g70500	843386	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
451.1	100.0	158.9	At1g24030	839015	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
346.8	100.0	43.9	At5g56370	835738	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
305.7	100.0	83.4	At2g38320	818412	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PMO	O.I.	C.G.	H.G.
303.2	100.0	141.2	At1g23460	838954	polygalacturonase	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
272.0	100.0	88.1	At1g75520	843888	SRS5 (SHI-RELATED SEQUENCE 5)	A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.	O.I.	C.G.	H.G.
266.8	100.0	62.5	At1g10800	837623	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
259.7	100.0	105.4	At1g67600	843081	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOP	O.I.	C.G.	H.G.
251.9	100.0	77.5	At5g01930	831699	(1-4)-beta-mannan endohydrolase, putative	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOA	O.I.	C.G.	H.G.
250.0	100.0	143.1	At1g68810	843213	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOB	O.I.	C.G.	H.G.
220.5	100.0	192.6	At5g13300	831171	SFC (SCARFACE)	Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.	O.I.	C.G.	H.G.
218.0	100.0	107.3	At4g08160	826365	glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein	Encodes a putative glycosyl hydrolase family 10 protein (xylanase).	O.I.	C.G.	H.G.
217.5	100.0	77.1	At5g12350	831110	Ran GTPase binding / chromatin binding / zinc ion binding	F:chromatin binding, zinc ion binding, Ran GTPase binding;P:unknown;C:plasma membrane;MOBPFAV	O.I.	C.G.	H.G.
214.5	100.0	107.1	At1g67420	843062	peptidase	F:peptidase activity;P:proteolysis;C:endomembrane system;MBFOPA	O.I.	C.G.	H.G.
200.1	100.0	204.2	At5g18830	832001	SPL7 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7)	Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c.	O.I.	C.G.	H.G.
195.4	100.0	88.4	At2g34790	818044	MEE23 (MATERNAL EFFECT EMBRYO ARREST 23)	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:embryonic development ending in seed dormancy, polar nucleus fusion;C:cell wall;BFPOAM	O.I.	C.G.	H.G.
192.7	100.0	102.4	At5g65970	836727	MLO10 (MILDEW RESISTANCE LOCUS O 10)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s	O.I.	C.G.	H.G.
187.4	100.0	65.2	At3g47950	823950	AHA4	mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase	O.I.	C.G.	H.G.
182.8	100.0	135.0	At1g67620	843083	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMP	O.I.	C.G.	H.G.
181.8	100.0	37.6	At3g04420	819597	anac048 (Arabidopsis NAC domain containing protein 48)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
172.1	100.0	125.2	At5g07080	830599	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
163.2	99.9	194.7	At2g03200	814849	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFMO	O.I.	C.G.	H.G.
158.5	99.9	50.0	At1g69430	843275	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
158.1	99.9	223.1	At5g13330	831174	Rap2.6L (related to AP2 6L)	encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.	O.I.	C.G.	H.G.
153.8	99.9	34.3	At1g50150		-	-	O.I.	C.G.	H.G.
153.2	99.9	106.4	At5g12400	831115	PHD finger transcription factor, putative	F:protein binding, DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPOFB	O.I.	C.G.	H.G.
152.4	99.9	275.3	At2g38080	818386	IRX12 (IRREGULAR XYLEM 12)	Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.	O.I.	C.G.	H.G.
152.2	99.9	43.3	At5g08600	830761	U3 ribonucleoprotein (Utp) family protein	F:molecular_function unknown;P:rRNA processing;C:small-subunit processome;OMFBPVA	O.I.	C.G.	H.G.
152.0	99.9	75.6	At1g49980	841422	DNA-directed DNA polymerase/ damaged DNA binding	F:damaged DNA binding, DNA-directed DNA polymerase activity;P:DNA repair;C:membrane;BOMFAP	O.I.	C.G.	H.G.
151.9	99.9	44.3	At1g71930	843524	VND7 (VASCULAR RELATED NAC-DOMAIN PROTEIN 7)	Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.	O.I.	C.G.	H.G.
150.0	99.9	307.4	At1g63120	842616	ATRBL2 (Arabidopsis thaliana Rhomboid-like 2)	AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein.	O.I.	C.G.	H.G.
149.2	99.9	122.0	At1g50240	841446	-	-	O.I.	C.G.	H.G.
148.9	99.9	81.4	At5g51500	835224	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
145.5	99.9	100.1	At3g48185	823974	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
143.9	99.9	42.0	At5g25290	832601	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
137.7	99.9	48.1	At3g26850	822300	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOV	O.I.	C.G.	H.G.
133.9	99.9	74.7	At1g69360	843268	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF	O.I.	C.G.	H.G.
133.0	99.9	45.2	At4g29230	829044	anac075 (Arabidopsis NAC domain containing protein 75)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOFBV	O.I.	C.G.	H.G.
132.7	99.9	53.1	At3g26680	822280	SNM1 (SENSITIVE TO NITROGEN MUSTARD 1)	involved in a SNM-dependent recombinational repair process of oxidatively induced DNA damage.	O.I.	C.G.	H.G.
132.7	99.9	36.4	At1g67370	843058	ASY1 (ASYNAPTIC 1)	meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.	O.I.	C.G.	H.G.
132.4	99.9	144.0	At1g50120	841434	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO	O.I.	C.G.	H.G.
131.8	99.9	218.1	At5g26270	832696	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MP	O.I.	C.G.	H.G.
131.1	99.9	157.3	At5g60020	836124	LAC17 (laccase 17)	putative laccase, a member of laccase family of genes (17 members in Arabidopsis).	O.I.	C.G.	H.G.
128.2	99.9	60.0	At2g04230	814960	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
126.2	99.9	185.5	At3g21550	821709	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
119.7	99.9	30.3	At1g77655	844101	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
119.4	99.9	119.2	At5g18780	831996	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
117.8	99.9	44.8	At1g43590	840943	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
116.9	99.9	107.7	At5g03260	831887	LAC11 (laccase 11)	putative laccase, a member of laccase family of genes (17 members in Arabidopsis).	O.I.	C.G.	H.G.
116.6	99.9	25.7	At4g05370	825885	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
116.5	99.9	179.8	At5g08500	830749	transmembrane CLPTM1 family protein	F:unknown;P:biological_process unknown;C:unknown;MOFP	O.I.	C.G.	H.G.
114.3	99.9	62.8	At1g17960	838375	threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative	F:nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding;P:threonyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation;C:cytoplasm;BOMFAP	O.I.	C.G.	H.G.
114.1	99.9	55.2	At5g12870	831127	MYB46 (MYB DOMAIN PROTEIN 46)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
112.7	99.9	122.4	At1g67320	843052	DNA primase, large subunit family	F:DNA primase activity;P:DNA replication, synthesis of RNA primer;C:alpha DNA polymerase:primase complex;MFOPA	O.I.	C.G.	H.G.
111.6	99.9	104.4	At4g32880	829424	ATHB-8 (HOMEOBOX GENE 8)	member of homeodomain-leucine zipper family, acting as a differentiation-promoting transcription factor of the vascular meristems.	O.I.	C.G.	H.G.
110.0	99.9	35.0	At1g50700	841492	CPK33	member of Calcium Dependent Protein Kinase	O.I.	C.G.	H.G.
109.0	99.9	57.2	At1g67410	843061	exostosin family protein	F:catalytic activity;P:biological_process unknown;C:endomembrane system, membrane;PMOBF	O.I.	C.G.	H.G.
106.8	99.9	24.0	At1g76250	843958	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;POM	O.I.	C.G.	H.G.
106.6	99.9	57.6	At1g47230	841126	cyclin, putative	F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFV	O.I.	C.G.	H.G.
105.5	99.9	29.6	At1g63520	842657	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
105.3	99.9	28.7	At5g19870	832108	unknown protein	F:unknown;P:unknown;C:endomembrane system;MP	O.I.	C.G.	H.G.
104.4	99.9	89.7	At1g55760	842025	BTB/POZ domain-containing protein	F:protein binding;P:biological_process unknown;C:unknown;MPOVF	O.I.	C.G.	H.G.
104.1	99.9	83.2	At1g50140	841436	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
102.8	99.9	29.5	At5g08480	830747	VQ motif-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
101.9	99.9	60.7	At1g47410	841146	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
101.2	99.9	212.2	At1g26820	839225	RNS3 (RIBONUCLEASE 3)	Encodes ribonuclease RNS3.	O.I.	C.G.	H.G.
101.1	99.9	29.9	At1g62700	842568	ANAC026	Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.	O.I.	C.G.	H.G.
100.7	99.9	64.2	At5g16490	831510	RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4)	encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. Protein most similar to RIC2 (family subgroup V). Gene is expressed in all tissues examined.Interacts with ROP2 during pavement cell morphogenesis and with ROP1 to promote apical F-actin assembly.	O.I.	C.G.	H.G.
100.5	99.9	29.7	At1g12260	837780	ANAC007 (ARABIDOPSIS NAC 007)	Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.	O.I.	C.G.	H.G.
99.0	99.9	57.7	At5g58520	835965	protein kinase family protein	F:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOFBVA	O.I.	C.G.	H.G.
97.9	99.9	86.4	At1g72740	843606	DNA-binding family protein / histone H1/H5 family protein	F:transcription factor activity;P:nucleosome assembly, regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
96.9	99.9	98.2	At1g71940	843525	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPFA	O.I.	C.G.	H.G.
95.7	99.9	102.5	At1g49950	841418	DNA-binding protein, putative	Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.	O.I.	C.G.	H.G.
95.0	99.9	122.2	At1g72830	843614	NF-YA3 (NUCLEAR FACTOR Y, SUBUNIT A3)	Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.	O.I.	C.G.	H.G.
95.0	99.9	60.5	At2g38340	818414	AP2 domain-containing transcription factor, putative (DRE2B)	encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.	O.I.	C.G.	H.G.
94.8	99.9	137.0	At5g18850	832003	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
94.2	99.9	90.7	At2g37090	818285	IRX9 (IRREGULAR XYLEM 9)	The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis.	O.I.	C.G.	H.G.
93.6	99.9	56.5	At5g26330	832702	plastocyanin-like domain-containing protein / mavicyanin, putative	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PF	O.I.	C.G.	H.G.
93.1	99.9	52.1	At5g18770	831995	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
92.1	99.9	88.8	At5g40020	833999	pathogenesis-related thaumatin family protein	F:molecular_function unknown;P:response to other organism;C:endomembrane system;PFMBO	O.I.	C.G.	H.G.
92.0	99.9	67.6	At1g67570	843078	unknown protein	F:unknown;P:unknown;C:nucleus;PO	O.I.	C.G.	H.G.
91.9	99.9	31.2	At5g11540	831026	FAD-binding domain-containing protein	F:D-arabinono-1,4-lactone oxidase activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system, membrane;BOFMPA	O.I.	C.G.	H.G.
91.8	99.9	30.6	At4g00220	828084	JLO (JAGGED LATERAL ORGANS)	Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.	O.I.	C.G.	H.G.
91.5	99.9	164.2	At1g30270	839907	CIPK23 (CBL-INTERACTING PROTEIN KINASE 23)	Arabidopsis thaliana CBL-interacting protein kinase 23. CIPK23 serves as a positive regulator of the potassium transporter AKT1 by directly phosphorylates AKT1. CIPK23 is activated by the binding of two calcineurin B-like proteins, CBL1 and CBL9.	O.I.	C.G.	H.G.
91.4	99.9	72.1	At5g58980	836015	ceramidase family protein	F:ceramidase activity;P:biological_process unknown;C:endomembrane system;MBFOP	O.I.	C.G.	H.G.
90.8	99.9	97.3	At5g59710	836092	VIP2 (VIRE2 INTERACTING PROTEIN2)	Encodes a nuclear-localized NOT (negative on TATA-less) domain-containing protein that interacts with the Agrobacterium VirE2 protein and is required for Agrobacterium-mediated plant transformation. It likely facilitates T-DNA integration into plant chromosomes and may play a role as a transcriptional regulator.	O.I.	C.G.	H.G.
90.4	99.9	90.8	At5g12290	831104	DGS1 (DGD1 SUPPRESSOR 1)	Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background.	O.I.	C.G.	H.G.
89.9	99.9	80.1	At1g69570	843293	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;POMFB	O.I.	C.G.	H.G.
88.8	99.9	23.8	At2g46760	819289	FAD-binding domain-containing protein	F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:membrane;BOFPMA	O.I.	C.G.	H.G.
87.8	99.9	61.9	At5g12260	831101	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFB	O.I.	C.G.	H.G.
87.2	99.9	92.6	At1g14130	837972	2-oxoglutarate-dependent dioxygenase, putative	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:nucleus;POBFM	O.I.	C.G.	H.G.
86.9	99.9	64.1	At5g24500	832521	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPF	O.I.	C.G.	H.G.
86.8	99.9	30.0	At5g07060	830597	zinc finger (CCCH-type) family protein	F:RNA binding, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;FMOPV	O.I.	C.G.	H.G.
85.6	99.9	140.6	At5g19530	832073	ACL5 (ACAULIS 5)	Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.	O.I.	C.G.	H.G.
85.3	99.9	123.8	At1g78780	844214	pathogenesis-related family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFM	O.I.	C.G.	H.G.
84.6	99.9	66.7	At5g58500	835963	LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5)	F:molecular_function unknown;P:biological_process unknown;C:unknown;PM	O.I.	C.G.	H.G.
82.8	99.9	54.5	At5g08565	830757	positive transcription elongation factor/ zinc ion binding	F:positive transcription elongation factor activity, zinc ion binding;P:positive regulation of transcription;C:nucleus;MFOP	O.I.	C.G.	H.G.
81.7	99.9	28.7	At3g43690	3769597	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
81.3	99.9	75.8	At2g03220	814851	FT1 (FUCOSYLTRANSFERASE 1)	member of Glycosyltransferase Family- 37	O.I.	C.G.	H.G.

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GSM ID	GSM133964
Assay name	Fukuda_1-9_8A_Rep1_ATH1
GSE experiment	GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.

Microarray experiments to specifically-expressed genes

GSM ID GSM133964 Assay name Fukuda_1-9_8A_Rep1_ATH1 GSE experiment GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.

GSM ID GSM133964

Assay name Fukuda_1-9_8A_Rep1_ATH1

GSE experiment GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.