CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133962

Assay name Fukuda_1-7_6A_Rep1_ATH1

GSE experiment GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1331.9 100.0 272.9 At1g24030 839015 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
1011.1 100.0 234.3 At1g70500 843386 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
636.2 100.0 120.4 At2g38320 818412 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PMO O.I. C.G. H.G.
621.3 100.0 157.6 At2g34790 818044 MEE23 (MATERNAL EFFECT EMBRYO ARREST 23) F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:embryonic development ending in seed dormancy, polar nucleus fusion;C:cell wall;BFPOAM O.I. C.G. H.G.
617.6 100.0 201.6 At1g23460 838954 polygalacturonase F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
599.1 100.0 93.7 At1g10800 837623 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
592.2 100.0 68.0 At5g19870 832108 unknown protein F:unknown;P:unknown;C:endomembrane system;MP O.I. C.G. H.G.
503.8 100.0 214.2 At5g07080 830599 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO O.I. C.G. H.G.
491.3 100.0 161.1 At4g08160 826365 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein Encodes a putative glycosyl hydrolase family 10 protein (xylanase). O.I. C.G. H.G.
483.9 100.0 139.7 At5g59700 836091 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
451.3 100.0 124.1 At5g26330 832702 plastocyanin-like domain-containing protein / mavicyanin, putative F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PF O.I. C.G. H.G.
443.7 100.0 126.7 At1g47410 841146 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
389.4 100.0 102.0 At5g12870 831127 MYB46 (MYB DOMAIN PROTEIN 46) Member of the R2R3 factor gene family. O.I. C.G. H.G.
386.5 100.0 299.6 At2g03200 814849 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFMO O.I. C.G. H.G.
386.5 100.0 96.0 At5g01930 831699 (1-4)-beta-mannan endohydrolase, putative F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOA O.I. C.G. H.G.
383.6 100.0 62.5 At4g00220 828084 JLO (JAGGED LATERAL ORGANS) Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves. O.I. C.G. H.G.
380.3 100.0 267.9 At5g60020 836124 LAC17 (laccase 17) putative laccase, a member of laccase family of genes (17 members in Arabidopsis). O.I. C.G. H.G.
378.9 100.0 193.9 At5g03260 831887 LAC11 (laccase 11) putative laccase, a member of laccase family of genes (17 members in Arabidopsis). O.I. C.G. H.G.
344.7 100.0 99.1 At1g75520 843888 SRS5 (SHI-RELATED SEQUENCE 5) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. O.I. C.G. H.G.
337.9 100.0 170.1 At5g40020 833999 pathogenesis-related thaumatin family protein F:molecular_function unknown;P:response to other organism;C:endomembrane system;PFMBO O.I. C.G. H.G.
336.5 100.0 46.4 At2g46760 819289 FAD-binding domain-containing protein F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:membrane;BOFPMA O.I. C.G. H.G.
320.1 100.0 167.2 At2g37090 818285 IRX9 (IRREGULAR XYLEM 9) The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis. O.I. C.G. H.G.
319.8 100.0 58.2 At5g11540 831026 FAD-binding domain-containing protein F:D-arabinono-1,4-lactone oxidase activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system, membrane;BOFMPA O.I. C.G. H.G.
317.1 100.0 52.7 At1g12260 837780 ANAC007 (ARABIDOPSIS NAC 007) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. O.I. C.G. H.G.
315.5 100.0 79.6 At5g14470 831298 GHMP kinase-related F:kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding;P:metabolic process, phosphorylation;C:cytoplasm;BOPAM O.I. C.G. H.G.
303.5 100.0 51.8 At1g62700 842568 ANAC026 Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. O.I. C.G. H.G.
301.5 100.0 62.4 At1g71930 843524 VND7 (VASCULAR RELATED NAC-DOMAIN PROTEIN 7) Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids. O.I. C.G. H.G.
285.3 100.0 108.1 At5g16490 831510 RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. Protein most similar to RIC2 (family subgroup V). Gene is expressed in all tissues examined.Interacts with ROP2 during pavement cell morphogenesis and with ROP1 to promote apical F-actin assembly. O.I. C.G. H.G.
270.6 100.0 61.3 At1g31720 840059 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
258.8 100.0 90.7 At5g14510 831302 armadillo/beta-catenin repeat family protein F:binding;P:biological_process unknown;C:cellular_component unknown;PFOM O.I. C.G. H.G.
246.9 100.0 350.3 At2g38080 818386 IRX12 (IRREGULAR XYLEM 12) Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype. O.I. C.G. H.G.
241.5 100.0 115.9 At1g14240 837985 nucleoside phosphatase family protein / GDA1/CD39 family protein F:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;MFPOB O.I. C.G. H.G.
240.3 100.0 256.0 At3g21550 821709 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
234.9 100.0 44.1 At1g63520 842657 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
228.1 100.0 136.7 At1g68810 843213 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOB O.I. C.G. H.G.
222.1 100.0 176.8 At5g46340 834677 O-acetyltransferase-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO O.I. C.G. H.G.
221.6 100.0 109.3 At5g01360 830298 - F:unknown;P:unknown;C:unknown;PMF O.I. C.G. H.G.
221.0 100.0 214.6 At5g18830 832001 SPL7 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7) Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c. O.I. C.G. H.G.
220.9 100.0 65.9 At5g38610 833851 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
218.5 100.0 43.0 At5g08480 830747 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
215.2 100.0 126.1 At5g12400 831115 PHD finger transcription factor, putative F:protein binding, DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPOFB O.I. C.G. H.G.
215.0 100.0 83.8 At4g18550 827587 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;PFOBMV O.I. C.G. H.G.
211.5 100.0 106.4 At1g67420 843062 peptidase F:peptidase activity;P:proteolysis;C:endomembrane system;MBFOPA O.I. C.G. H.G.
209.8 100.0 214.1 At5g24380 832509 YSL2 (YELLOW STRIPE LIKE 2) closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1 O.I. C.G. H.G.
207.0 100.0 68.5 At3g47950 823950 AHA4 mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase O.I. C.G. H.G.
206.4 100.0 360.7 At1g63120 842616 ATRBL2 (Arabidopsis thaliana Rhomboid-like 2) AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein. O.I. C.G. H.G.
193.4 100.0 174.1 At1g50120 841434 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO O.I. C.G. H.G.
193.1 100.0 54.4 At4g29230 829044 anac075 (Arabidopsis NAC domain containing protein 75) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOFBV O.I. C.G. H.G.
191.4 100.0 57.9 At1g54790 841920 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
188.0 100.0 177.9 At5g13300 831171 SFC (SCARFACE) Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin. O.I. C.G. H.G.
186.4 100.0 299.0 At4g35350 829688 XCP1 (XYLEM CYSTEINE PEPTIDASE 1) tracheary element vacuolar protein O.I. C.G. H.G.
184.7 100.0 76.1 At2g04850 815031 auxin-responsive protein-related F:unknown;P:unknown;C:membrane;PMFOB O.I. C.G. H.G.
182.3 100.0 216.5 At5g17420 831608 IRX3 (IRREGULAR XYLEM 3) Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181). O.I. C.G. H.G.
179.9 100.0 56.8 At5g60720 836193 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBM O.I. C.G. H.G.
178.6 100.0 69.9 At5g12350 831110 Ran GTPase binding / chromatin binding / zinc ion binding F:chromatin binding, zinc ion binding, Ran GTPase binding;P:unknown;C:plasma membrane;MOBPFAV O.I. C.G. H.G.
178.4 100.0 153.0 At5g15630 831417 IRX6 Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars. O.I. C.G. H.G.
173.7 100.0 31.1 At5g56370 835738 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
163.6 99.9 83.3 At1g48280 841248 hydroxyproline-rich glycoprotein family protein F:unknown;P:biological_process unknown;C:unknown;MPOFBVA O.I. C.G. H.G.
163.0 99.9 38.9 At1g63300 842636 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MOBFPAV O.I. C.G. H.G.
162.8 99.9 57.0 At1g58070 842174 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBVA O.I. C.G. H.G.
162.7 99.9 135.6 At1g19300 838512 PARVUS (PARVUS) The PARVUS/GLZ1 gene encodes a putative family 8 glycosyl transferase that contributes to xylan biosynthesis. Its gene expression shows good co-variance with the IRX3 gene involved in secondary cell wall synthesis. PARVUS/GLZ1 is predicted to have galacturonosyltransferase activity and may be involved in the formation of the complex oligosaccharide sequence present at the reducing end of xylan. PARVUS is expressed in cells undergoing secondary wall thickening, and parvus mutants have thinner cell walls. O.I. C.G. H.G.
161.9 99.9 241.7 At5g26270 832696 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MP O.I. C.G. H.G.
161.9 99.9 29.6 At1g76250 843958 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;POM O.I. C.G. H.G.
161.1 99.9 267.6 At1g26820 839225 RNS3 (RIBONUCLEASE 3) Encodes ribonuclease RNS3. O.I. C.G. H.G.
155.1 99.9 221.0 At5g13330 831174 Rap2.6L (related to AP2 6L) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. O.I. C.G. H.G.
154.9 99.9 93.9 At5g58980 836015 ceramidase family protein F:ceramidase activity;P:biological_process unknown;C:endomembrane system;MBFOP O.I. C.G. H.G.
154.5 99.9 73.0 At1g17960 838375 threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative F:nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding;P:threonyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation;C:cytoplasm;BOMFAP O.I. C.G. H.G.
150.4 99.9 34.2 At3g04420 819597 anac048 (Arabidopsis NAC domain containing protein 48) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO O.I. C.G. H.G.
149.3 99.9 38.6 At1g67370 843058 ASY1 (ASYNAPTIC 1) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal. O.I. C.G. H.G.
145.5 99.9 47.9 At1g69430 843275 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
144.8 99.9 52.4 At5g45020 834533 - F:unknown;P:unknown;C:cellular_component unknown;BOFPMA O.I. C.G. H.G.
143.0 99.9 173.0 At5g18940 832012 Mo25 family protein F:binding;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
142.9 99.9 318.8 At5g59290 836047 UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3) Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be cytosolic by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. O.I. C.G. H.G.
142.9 99.9 156.2 At3g62020 825375 GLP10 (GERMIN-LIKE PROTEIN 10) germin-like protein (GLP10) O.I. C.G. H.G.
141.7 99.9 99.8 At1g49890 841412 unknown protein F:unknown;P:unknown;C:chloroplast;OMFBPVA O.I. C.G. H.G.
139.0 99.9 92.8 At3g59480 825117 pfkB-type carbohydrate kinase family protein F:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:cellular_component unknown;BOPAMF O.I. C.G. H.G.
133.4 99.9 41.6 At4g28500 828968 ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73) F:transcription factor activity, transcription activator activity;P:multicellular organismal development, regulation of secondary cell wall thickening;C:nucleus;PO O.I. C.G. H.G.
129.3 99.9 172.8 At5g19530 832073 ACL5 (ACAULIS 5) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function. O.I. C.G. H.G.
128.4 99.9 436.7 At1g20850 838677 XCP2 (xylem cysteine peptidase 2) F:peptidase activity, cysteine-type peptidase activity;P:proteolysis, developmental programmed cell death;C:cell wall;MOPVBAF O.I. C.G. H.G.
126.2 99.9 74.2 At5g12260 831101 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFB O.I. C.G. H.G.
121.4 99.9 60.4 At1g67410 843061 exostosin family protein F:catalytic activity;P:biological_process unknown;C:endomembrane system, membrane;PMOBF O.I. C.G. H.G.
117.0 99.9 66.3 At1g49980 841422 DNA-directed DNA polymerase/ damaged DNA binding F:damaged DNA binding, DNA-directed DNA polymerase activity;P:DNA repair;C:membrane;BOMFAP O.I. C.G. H.G.
115.8 99.9 222.9 At3g16920 820947 chitinase F:chitinase activity;P:cell wall macromolecule catabolic process;C:unknown;PBMOF O.I. C.G. H.G.
115.7 99.9 64.3 At5g06610 830549 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB O.I. C.G. H.G.
114.6 99.9 78.7 At1g58370 842206 RXF12 Encodes a protein with xylanase activity. O.I. C.G. H.G.
114.4 99.9 93.9 At1g55760 842025 BTB/POZ domain-containing protein F:protein binding;P:biological_process unknown;C:unknown;MPOVF O.I. C.G. H.G.
113.8 99.9 109.0 At5g59710 836092 VIP2 (VIRE2 INTERACTING PROTEIN2) Encodes a nuclear-localized NOT (negative on TATA-less) domain-containing protein that interacts with the Agrobacterium VirE2 protein and is required for Agrobacterium-mediated plant transformation. It likely facilitates T-DNA integration into plant chromosomes and may play a role as a transcriptional regulator. O.I. C.G. H.G.
113.3 99.9 161.4 At4g18780 827612 IRX1 (IRREGULAR XYLEM 1) Encodes a member of the cellulose synthase family involved in secondary cell wall biosynthesis. Mutants have abnormal xylem formation, reduced cellulose content, and enhanced drought and osmotic stress tolerance. Mediates resistance towards bacterial pathogens via ABA. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling. O.I. C.G. H.G.
112.2 99.9 59.1 At1g47230 841126 cyclin, putative F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFV O.I. C.G. H.G.
112.1 99.9 73.0 At5g14550 831306 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PO O.I. C.G. H.G.
110.0 99.9 29.0 At1g50150 - - O.I. C.G. H.G.
109.8 99.9 68.5 At1g67600 843081 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOP O.I. C.G. H.G.
109.0 99.9 77.0 At5g65970 836727 MLO10 (MILDEW RESISTANCE LOCUS O 10) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s O.I. C.G. H.G.
107.5 99.9 41.0 At1g09440 837467 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
104.3 99.9 111.4 At5g18780 831996 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
102.6 99.9 68.1 At2g38480 818430 integral membrane protein, putative F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, membrane;P O.I. C.G. H.G.
102.2 99.9 48.5 At5g07800 830673 flavin-containing monooxygenase family protein / FMO family protein F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
102.0 99.9 99.8 At4g32880 829424 ATHB-8 (HOMEOBOX GENE 8) member of homeodomain-leucine zipper family, acting as a differentiation-promoting transcription factor of the vascular meristems. O.I. C.G. H.G.
101.6 99.9 100.7 At1g50240 841446 - - O.I. C.G. H.G.
101.3 99.9 83.5 At3g48185 823974 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
1331.9	100.0	272.9	At1g24030	839015	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
1011.1	100.0	234.3	At1g70500	843386	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
636.2	100.0	120.4	At2g38320	818412	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PMO	O.I.	C.G.	H.G.
621.3	100.0	157.6	At2g34790	818044	MEE23 (MATERNAL EFFECT EMBRYO ARREST 23)	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:embryonic development ending in seed dormancy, polar nucleus fusion;C:cell wall;BFPOAM	O.I.	C.G.	H.G.
617.6	100.0	201.6	At1g23460	838954	polygalacturonase	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
599.1	100.0	93.7	At1g10800	837623	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
592.2	100.0	68.0	At5g19870	832108	unknown protein	F:unknown;P:unknown;C:endomembrane system;MP	O.I.	C.G.	H.G.
503.8	100.0	214.2	At5g07080	830599	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
491.3	100.0	161.1	At4g08160	826365	glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein	Encodes a putative glycosyl hydrolase family 10 protein (xylanase).	O.I.	C.G.	H.G.
483.9	100.0	139.7	At5g59700	836091	protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
451.3	100.0	124.1	At5g26330	832702	plastocyanin-like domain-containing protein / mavicyanin, putative	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PF	O.I.	C.G.	H.G.
443.7	100.0	126.7	At1g47410	841146	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
389.4	100.0	102.0	At5g12870	831127	MYB46 (MYB DOMAIN PROTEIN 46)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
386.5	100.0	299.6	At2g03200	814849	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFMO	O.I.	C.G.	H.G.
386.5	100.0	96.0	At5g01930	831699	(1-4)-beta-mannan endohydrolase, putative	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFBOA	O.I.	C.G.	H.G.
383.6	100.0	62.5	At4g00220	828084	JLO (JAGGED LATERAL ORGANS)	Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves.	O.I.	C.G.	H.G.
380.3	100.0	267.9	At5g60020	836124	LAC17 (laccase 17)	putative laccase, a member of laccase family of genes (17 members in Arabidopsis).	O.I.	C.G.	H.G.
378.9	100.0	193.9	At5g03260	831887	LAC11 (laccase 11)	putative laccase, a member of laccase family of genes (17 members in Arabidopsis).	O.I.	C.G.	H.G.
344.7	100.0	99.1	At1g75520	843888	SRS5 (SHI-RELATED SEQUENCE 5)	A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.	O.I.	C.G.	H.G.
337.9	100.0	170.1	At5g40020	833999	pathogenesis-related thaumatin family protein	F:molecular_function unknown;P:response to other organism;C:endomembrane system;PFMBO	O.I.	C.G.	H.G.
336.5	100.0	46.4	At2g46760	819289	FAD-binding domain-containing protein	F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:membrane;BOFPMA	O.I.	C.G.	H.G.
320.1	100.0	167.2	At2g37090	818285	IRX9 (IRREGULAR XYLEM 9)	The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis.	O.I.	C.G.	H.G.
319.8	100.0	58.2	At5g11540	831026	FAD-binding domain-containing protein	F:D-arabinono-1,4-lactone oxidase activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system, membrane;BOFMPA	O.I.	C.G.	H.G.
317.1	100.0	52.7	At1g12260	837780	ANAC007 (ARABIDOPSIS NAC 007)	Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.	O.I.	C.G.	H.G.
315.5	100.0	79.6	At5g14470	831298	GHMP kinase-related	F:kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding;P:metabolic process, phosphorylation;C:cytoplasm;BOPAM	O.I.	C.G.	H.G.
303.5	100.0	51.8	At1g62700	842568	ANAC026	Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.	O.I.	C.G.	H.G.
301.5	100.0	62.4	At1g71930	843524	VND7 (VASCULAR RELATED NAC-DOMAIN PROTEIN 7)	Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.	O.I.	C.G.	H.G.
285.3	100.0	108.1	At5g16490	831510	RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4)	encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. Protein most similar to RIC2 (family subgroup V). Gene is expressed in all tissues examined.Interacts with ROP2 during pavement cell morphogenesis and with ROP1 to promote apical F-actin assembly.	O.I.	C.G.	H.G.
270.6	100.0	61.3	At1g31720	840059	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
258.8	100.0	90.7	At5g14510	831302	armadillo/beta-catenin repeat family protein	F:binding;P:biological_process unknown;C:cellular_component unknown;PFOM	O.I.	C.G.	H.G.
246.9	100.0	350.3	At2g38080	818386	IRX12 (IRREGULAR XYLEM 12)	Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype.	O.I.	C.G.	H.G.
241.5	100.0	115.9	At1g14240	837985	nucleoside phosphatase family protein / GDA1/CD39 family protein	F:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;MFPOB	O.I.	C.G.	H.G.
240.3	100.0	256.0	At3g21550	821709	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
234.9	100.0	44.1	At1g63520	842657	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
228.1	100.0	136.7	At1g68810	843213	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOB	O.I.	C.G.	H.G.
222.1	100.0	176.8	At5g46340	834677	O-acetyltransferase-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO	O.I.	C.G.	H.G.
221.6	100.0	109.3	At5g01360	830298	-	F:unknown;P:unknown;C:unknown;PMF	O.I.	C.G.	H.G.
221.0	100.0	214.6	At5g18830	832001	SPL7 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7)	Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c.	O.I.	C.G.	H.G.
220.9	100.0	65.9	At5g38610	833851	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
218.5	100.0	43.0	At5g08480	830747	VQ motif-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
215.2	100.0	126.1	At5g12400	831115	PHD finger transcription factor, putative	F:protein binding, DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPOFB	O.I.	C.G.	H.G.
215.0	100.0	83.8	At4g18550	827587	lipase class 3 family protein	F:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;PFOBMV	O.I.	C.G.	H.G.
211.5	100.0	106.4	At1g67420	843062	peptidase	F:peptidase activity;P:proteolysis;C:endomembrane system;MBFOPA	O.I.	C.G.	H.G.
209.8	100.0	214.1	At5g24380	832509	YSL2 (YELLOW STRIPE LIKE 2)	closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1	O.I.	C.G.	H.G.
207.0	100.0	68.5	At3g47950	823950	AHA4	mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase	O.I.	C.G.	H.G.
206.4	100.0	360.7	At1g63120	842616	ATRBL2 (Arabidopsis thaliana Rhomboid-like 2)	AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein.	O.I.	C.G.	H.G.
193.4	100.0	174.1	At1g50120	841434	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO	O.I.	C.G.	H.G.
193.1	100.0	54.4	At4g29230	829044	anac075 (Arabidopsis NAC domain containing protein 75)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOFBV	O.I.	C.G.	H.G.
191.4	100.0	57.9	At1g54790	841920	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
188.0	100.0	177.9	At5g13300	831171	SFC (SCARFACE)	Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.	O.I.	C.G.	H.G.
186.4	100.0	299.0	At4g35350	829688	XCP1 (XYLEM CYSTEINE PEPTIDASE 1)	tracheary element vacuolar protein	O.I.	C.G.	H.G.
184.7	100.0	76.1	At2g04850	815031	auxin-responsive protein-related	F:unknown;P:unknown;C:membrane;PMFOB	O.I.	C.G.	H.G.
182.3	100.0	216.5	At5g17420	831608	IRX3 (IRREGULAR XYLEM 3)	Encodes a xylem-specific cellulose synthase that is phosphorylated on one or more serine residues (on either S185 or one of S180 or S181).	O.I.	C.G.	H.G.
179.9	100.0	56.8	At5g60720	836193	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBM	O.I.	C.G.	H.G.
178.6	100.0	69.9	At5g12350	831110	Ran GTPase binding / chromatin binding / zinc ion binding	F:chromatin binding, zinc ion binding, Ran GTPase binding;P:unknown;C:plasma membrane;MOBPFAV	O.I.	C.G.	H.G.
178.4	100.0	153.0	At5g15630	831417	IRX6	Encodes a member of the COBRA family, similar to phytochelatin synthetase. Involved in secondary cell wall biosynthesis. Mutants make smaller plants with reduced levels of cellulose and cell wall sugars.	O.I.	C.G.	H.G.
173.7	100.0	31.1	At5g56370	835738	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
163.6	99.9	83.3	At1g48280	841248	hydroxyproline-rich glycoprotein family protein	F:unknown;P:biological_process unknown;C:unknown;MPOFBVA	O.I.	C.G.	H.G.
163.0	99.9	38.9	At1g63300	842636	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MOBFPAV	O.I.	C.G.	H.G.
162.8	99.9	57.0	At1g58070	842174	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBVA	O.I.	C.G.	H.G.
162.7	99.9	135.6	At1g19300	838512	PARVUS (PARVUS)	The PARVUS/GLZ1 gene encodes a putative family 8 glycosyl transferase that contributes to xylan biosynthesis. Its gene expression shows good co-variance with the IRX3 gene involved in secondary cell wall synthesis. PARVUS/GLZ1 is predicted to have galacturonosyltransferase activity and may be involved in the formation of the complex oligosaccharide sequence present at the reducing end of xylan. PARVUS is expressed in cells undergoing secondary wall thickening, and parvus mutants have thinner cell walls.	O.I.	C.G.	H.G.
161.9	99.9	241.7	At5g26270	832696	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MP	O.I.	C.G.	H.G.
161.9	99.9	29.6	At1g76250	843958	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;POM	O.I.	C.G.	H.G.
161.1	99.9	267.6	At1g26820	839225	RNS3 (RIBONUCLEASE 3)	Encodes ribonuclease RNS3.	O.I.	C.G.	H.G.
155.1	99.9	221.0	At5g13330	831174	Rap2.6L (related to AP2 6L)	encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.	O.I.	C.G.	H.G.
154.9	99.9	93.9	At5g58980	836015	ceramidase family protein	F:ceramidase activity;P:biological_process unknown;C:endomembrane system;MBFOP	O.I.	C.G.	H.G.
154.5	99.9	73.0	At1g17960	838375	threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative	F:nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding;P:threonyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation;C:cytoplasm;BOMFAP	O.I.	C.G.	H.G.
150.4	99.9	34.2	At3g04420	819597	anac048 (Arabidopsis NAC domain containing protein 48)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
149.3	99.9	38.6	At1g67370	843058	ASY1 (ASYNAPTIC 1)	meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.	O.I.	C.G.	H.G.
145.5	99.9	47.9	At1g69430	843275	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
144.8	99.9	52.4	At5g45020	834533	-	F:unknown;P:unknown;C:cellular_component unknown;BOFPMA	O.I.	C.G.	H.G.
143.0	99.9	173.0	At5g18940	832012	Mo25 family protein	F:binding;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
142.9	99.9	318.8	At5g59290	836047	UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3)	Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be cytosolic by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.	O.I.	C.G.	H.G.
142.9	99.9	156.2	At3g62020	825375	GLP10 (GERMIN-LIKE PROTEIN 10)	germin-like protein (GLP10)	O.I.	C.G.	H.G.
141.7	99.9	99.8	At1g49890	841412	unknown protein	F:unknown;P:unknown;C:chloroplast;OMFBPVA	O.I.	C.G.	H.G.
139.0	99.9	92.8	At3g59480	825117	pfkB-type carbohydrate kinase family protein	F:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:cellular_component unknown;BOPAMF	O.I.	C.G.	H.G.
133.4	99.9	41.6	At4g28500	828968	ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73)	F:transcription factor activity, transcription activator activity;P:multicellular organismal development, regulation of secondary cell wall thickening;C:nucleus;PO	O.I.	C.G.	H.G.
129.3	99.9	172.8	At5g19530	832073	ACL5 (ACAULIS 5)	Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.	O.I.	C.G.	H.G.
128.4	99.9	436.7	At1g20850	838677	XCP2 (xylem cysteine peptidase 2)	F:peptidase activity, cysteine-type peptidase activity;P:proteolysis, developmental programmed cell death;C:cell wall;MOPVBAF	O.I.	C.G.	H.G.
126.2	99.9	74.2	At5g12260	831101	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFB	O.I.	C.G.	H.G.
121.4	99.9	60.4	At1g67410	843061	exostosin family protein	F:catalytic activity;P:biological_process unknown;C:endomembrane system, membrane;PMOBF	O.I.	C.G.	H.G.
117.0	99.9	66.3	At1g49980	841422	DNA-directed DNA polymerase/ damaged DNA binding	F:damaged DNA binding, DNA-directed DNA polymerase activity;P:DNA repair;C:membrane;BOMFAP	O.I.	C.G.	H.G.
115.8	99.9	222.9	At3g16920	820947	chitinase	F:chitinase activity;P:cell wall macromolecule catabolic process;C:unknown;PBMOF	O.I.	C.G.	H.G.
115.7	99.9	64.3	At5g06610	830549	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB	O.I.	C.G.	H.G.
114.6	99.9	78.7	At1g58370	842206	RXF12	Encodes a protein with xylanase activity.	O.I.	C.G.	H.G.
114.4	99.9	93.9	At1g55760	842025	BTB/POZ domain-containing protein	F:protein binding;P:biological_process unknown;C:unknown;MPOVF	O.I.	C.G.	H.G.
113.8	99.9	109.0	At5g59710	836092	VIP2 (VIRE2 INTERACTING PROTEIN2)	Encodes a nuclear-localized NOT (negative on TATA-less) domain-containing protein that interacts with the Agrobacterium VirE2 protein and is required for Agrobacterium-mediated plant transformation. It likely facilitates T-DNA integration into plant chromosomes and may play a role as a transcriptional regulator.	O.I.	C.G.	H.G.
113.3	99.9	161.4	At4g18780	827612	IRX1 (IRREGULAR XYLEM 1)	Encodes a member of the cellulose synthase family involved in secondary cell wall biosynthesis. Mutants have abnormal xylem formation, reduced cellulose content, and enhanced drought and osmotic stress tolerance. Mediates resistance towards bacterial pathogens via ABA. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.	O.I.	C.G.	H.G.
112.2	99.9	59.1	At1g47230	841126	cyclin, putative	F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFV	O.I.	C.G.	H.G.
112.1	99.9	73.0	At5g14550	831306	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PO	O.I.	C.G.	H.G.
110.0	99.9	29.0	At1g50150		-	-	O.I.	C.G.	H.G.
109.8	99.9	68.5	At1g67600	843081	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOP	O.I.	C.G.	H.G.
109.0	99.9	77.0	At5g65970	836727	MLO10 (MILDEW RESISTANCE LOCUS O 10)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s	O.I.	C.G.	H.G.
107.5	99.9	41.0	At1g09440	837467	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
104.3	99.9	111.4	At5g18780	831996	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
102.6	99.9	68.1	At2g38480	818430	integral membrane protein, putative	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, membrane;P	O.I.	C.G.	H.G.
102.2	99.9	48.5	At5g07800	830673	flavin-containing monooxygenase family protein / FMO family protein	F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
102.0	99.9	99.8	At4g32880	829424	ATHB-8 (HOMEOBOX GENE 8)	member of homeodomain-leucine zipper family, acting as a differentiation-promoting transcription factor of the vascular meristems.	O.I.	C.G.	H.G.
101.6	99.9	100.7	At1g50240	841446	-	-	O.I.	C.G.	H.G.
101.3	99.9	83.5	At3g48185	823974	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.

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GSM ID	GSM133962
Assay name	Fukuda_1-7_6A_Rep1_ATH1
GSE experiment	GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.

Microarray experiments to specifically-expressed genes

GSM ID GSM133962 Assay name Fukuda_1-7_6A_Rep1_ATH1 GSE experiment GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.

GSM ID GSM133962

Assay name Fukuda_1-7_6A_Rep1_ATH1

GSE experiment GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.