CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133960

Assay name Fukuda_1-5_4A_Rep1_ATH1

GSE experiment GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
432.4 100.0 121.4 At5g26330 832702 plastocyanin-like domain-containing protein / mavicyanin, putative F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PF O.I. C.G. H.G.
334.7 100.0 102.4 At2g04850 815031 auxin-responsive protein-related F:unknown;P:unknown;C:membrane;PMFOB O.I. C.G. H.G.
270.7 100.0 129.5 At3g59480 825117 pfkB-type carbohydrate kinase family protein F:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:cellular_component unknown;BOPAMF O.I. C.G. H.G.
231.2 100.0 101.4 At5g51500 835224 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
226.6 100.0 35.5 At5g56370 835738 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
225.6 100.0 58.8 At4g29230 829044 anac075 (Arabidopsis NAC domain containing protein 75) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOFBV O.I. C.G. H.G.
215.0 100.0 107.2 At1g67420 843062 peptidase F:peptidase activity;P:proteolysis;C:endomembrane system;MBFOPA O.I. C.G. H.G.
201.6 100.0 53.7 At2g37210 818298 - Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950. O.I. C.G. H.G.
199.1 100.0 89.6 At5g59700 836091 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
198.9 100.0 127.7 At1g68810 843213 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOB O.I. C.G. H.G.
195.9 100.0 74.7 At1g75520 843888 SRS5 (SHI-RELATED SEQUENCE 5) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. O.I. C.G. H.G.
185.9 100.0 134.7 At4g32880 829424 ATHB-8 (HOMEOBOX GENE 8) member of homeodomain-leucine zipper family, acting as a differentiation-promoting transcription factor of the vascular meristems. O.I. C.G. H.G.
181.7 100.0 53.5 At1g69430 843275 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
177.4 100.0 172.8 At5g13300 831171 SFC (SCARFACE) Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin. O.I. C.G. H.G.
164.5 100.0 76.0 At1g31320 840020 LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4) F:unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
160.9 99.9 93.5 At1g70500 843386 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
155.6 99.9 180.0 At5g18830 832001 SPL7 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7) Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c. O.I. C.G. H.G.
153.0 99.9 44.1 At5g06710 830560 HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA) Homeobox-leucine zipper protein. O.I. C.G. H.G.
145.0 99.9 34.7 At1g63520 842657 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
144.2 99.9 159.0 At3g10080 820169 germin-like protein, putative F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PBFOM O.I. C.G. H.G.
143.1 99.9 62.6 At5g12350 831110 Ran GTPase binding / chromatin binding / zinc ion binding F:chromatin binding, zinc ion binding, Ran GTPase binding;P:unknown;C:plasma membrane;MOBPFAV O.I. C.G. H.G.
142.4 99.9 149.4 At1g50120 841434 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO O.I. C.G. H.G.
142.0 99.9 76.3 At5g16490 831510 RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. Protein most similar to RIC2 (family subgroup V). Gene is expressed in all tissues examined.Interacts with ROP2 during pavement cell morphogenesis and with ROP1 to promote apical F-actin assembly. O.I. C.G. H.G.
141.9 99.9 57.2 At5g07800 830673 flavin-containing monooxygenase family protein / FMO family protein F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
139.4 99.9 52.4 At1g79620 844301 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
135.9 99.9 116.4 At1g50240 841446 - - O.I. C.G. H.G.
133.1 99.9 204.7 At5g13330 831174 Rap2.6L (related to AP2 6L) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. O.I. C.G. H.G.
131.4 99.9 174.2 At5g19530 832073 ACL5 (ACAULIS 5) Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function. O.I. C.G. H.G.
130.3 99.9 70.0 At1g49980 841422 DNA-directed DNA polymerase/ damaged DNA binding F:damaged DNA binding, DNA-directed DNA polymerase activity;P:DNA repair;C:membrane;BOMFAP O.I. C.G. H.G.
129.7 99.9 97.9 At5g12400 831115 PHD finger transcription factor, putative F:protein binding, DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPOFB O.I. C.G. H.G.
128.1 99.9 74.7 At5g12260 831101 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFB O.I. C.G. H.G.
127.6 99.9 35.7 At1g67370 843058 ASY1 (ASYNAPTIC 1) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal. O.I. C.G. H.G.
126.5 99.9 299.9 At5g59290 836047 UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3) Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be cytosolic by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes. O.I. C.G. H.G.
125.7 99.9 212.9 At5g26270 832696 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MP O.I. C.G. H.G.
125.3 99.9 170.6 At2g03200 814849 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFMO O.I. C.G. H.G.
123.3 99.9 90.1 At1g23460 838954 polygalacturonase F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
121.1 99.9 56.9 At5g12870 831127 MYB46 (MYB DOMAIN PROTEIN 46) Member of the R2R3 factor gene family. O.I. C.G. H.G.
119.6 99.9 49.0 At5g14470 831298 GHMP kinase-related F:kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding;P:metabolic process, phosphorylation;C:cytoplasm;BOPAM O.I. C.G. H.G.
117.3 99.9 60.9 At3g55890 824755 yippee family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
112.0 99.9 15.7 At3g26010 822198 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
111.9 99.9 105.6 At1g67620 843083 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMP O.I. C.G. H.G.
111.2 99.9 87.5 At3g48185 823974 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
111.1 99.9 193.8 At3g26720 822284 glycosyl hydrolase family 38 protein F:in 6 functions;P:mannose metabolic process, carbohydrate metabolic process;C:plasma membrane, vacuole, plant-type cell wall;MOPBFA O.I. C.G. H.G.
110.4 99.9 29.1 At1g77655 844101 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
109.9 99.9 133.7 At1g51140 841537 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;POFM O.I. C.G. H.G.
109.0 99.9 37.5 At3g23060 821880 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOPFBV O.I. C.G. H.G.
108.1 99.9 76.7 At5g65970 836727 MLO10 (MILDEW RESISTANCE LOCUS O 10) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s O.I. C.G. H.G.
106.5 99.9 51.8 At5g08360 830734 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
104.4 99.9 57.0 At1g47230 841126 cyclin, putative F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFV O.I. C.G. H.G.
103.7 99.9 117.5 At1g67320 843052 DNA primase, large subunit family F:DNA primase activity;P:DNA replication, synthesis of RNA primer;C:alpha DNA polymerase:primase complex;MFOPA O.I. C.G. H.G.
102.7 99.9 106.2 At1g49950 841418 DNA-binding protein, putative Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats. O.I. C.G. H.G.
100.9 99.9 62.4 At2g38340 818414 AP2 domain-containing transcription factor, putative (DRE2B) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought. O.I. C.G. H.G.
100.9 99.9 36.1 At1g71930 843524 VND7 (VASCULAR RELATED NAC-DOMAIN PROTEIN 7) Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids. O.I. C.G. H.G.
100.6 99.9 134.4 At1g78780 844214 pathogenesis-related family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFM O.I. C.G. H.G.
99.9 99.9 47.6 At3g47950 823950 AHA4 mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase O.I. C.G. H.G.
97.9 99.9 23.0 At1g76250 843958 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;POM O.I. C.G. H.G.
97.7 99.9 119.9 At4g25530 828658 FWA Encodes a homeodomain-containing transcription factor that controls flowering. FWA is silenced in wild type plants and reverse of the imprinted silencing causes a late flowering phenotype. FWA gene contains two tandem repeats around the transcription start site that are necessary and sufficient for silencing via DNA methylation. O.I. C.G. H.G.
97.4 99.9 164.4 At5g08500 830749 transmembrane CLPTM1 family protein F:unknown;P:biological_process unknown;C:unknown;MOFP O.I. C.G. H.G.
96.6 99.9 27.2 At1g50150 - - O.I. C.G. H.G.
95.9 99.9 100.1 At5g59710 836092 VIP2 (VIRE2 INTERACTING PROTEIN2) Encodes a nuclear-localized NOT (negative on TATA-less) domain-containing protein that interacts with the Agrobacterium VirE2 protein and is required for Agrobacterium-mediated plant transformation. It likely facilitates T-DNA integration into plant chromosomes and may play a role as a transcriptional regulator. O.I. C.G. H.G.
94.9 99.9 81.2 At5g11890 831062 - F:molecular_function unknown;P:unknown;C:plasma membrane;PO O.I. C.G. H.G.
94.6 99.9 63.6 At1g67600 843081 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOP O.I. C.G. H.G.
94.4 99.9 76.4 At5g14530 831304 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MBFOPA O.I. C.G. H.G.
93.8 99.9 57.5 At1g30650 839945 WRKY14 member of WRKY Transcription Factor; Group II-e O.I. C.G. H.G.
92.9 99.9 122.0 At5g50260 835091 cysteine proteinase, putative F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
91.6 99.9 78.1 At1g50140 841436 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
90.9 99.9 41.5 At5g45020 834533 - F:unknown;P:unknown;C:cellular_component unknown;BOFPMA O.I. C.G. H.G.
90.4 99.9 39.0 At3g26850 822300 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOV O.I. C.G. H.G.
90.1 99.9 52.0 At1g67410 843061 exostosin family protein F:catalytic activity;P:biological_process unknown;C:endomembrane system, membrane;PMOBF O.I. C.G. H.G.
89.7 99.9 94.5 At1g71940 843525 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPFA O.I. C.G. H.G.
88.3 99.9 53.0 At5g14510 831302 armadillo/beta-catenin repeat family protein F:binding;P:biological_process unknown;C:cellular_component unknown;PFOM O.I. C.G. H.G.
88.2 99.9 375.2 At1g51160 841539 synbindin, putative F:molecular_function unknown;P:transport, ER to Golgi vesicle-mediated transport;C:cis-Golgi network;MFOP O.I. C.G. H.G.
88.2 99.9 132.2 At5g18850 832003 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
88.1 99.9 33.8 At5g02640 831166 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
87.0 99.9 81.5 At1g72740 843606 DNA-binding family protein / histone H1/H5 family protein F:transcription factor activity;P:nucleosome assembly, regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
85.7 99.9 79.8 At5g24710 832542 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPVA O.I. C.G. H.G.
85.2 99.9 23.0 At5g07720 830665 galactosyl transferase GMA12/MNN10 family protein F:transferase activity, transferring glycosyl groups, transferase activity;P:biological_process unknown;C:integral to membrane;PFO O.I. C.G. H.G.
84.8 99.9 100.5 At5g18780 831996 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
83.7 99.9 68.3 At1g14240 837985 nucleoside phosphatase family protein / GDA1/CD39 family protein F:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;MFPOB O.I. C.G. H.G.
82.8 99.9 43.4 At2g38320 818412 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PMO O.I. C.G. H.G.
82.7 99.9 23.0 At2g46760 819289 FAD-binding domain-containing protein F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:membrane;BOFPMA O.I. C.G. H.G.
81.0 99.9 139.6 At1g75510 843887 transcription initiation factor IIF beta subunit (TFIIF-beta) family protein F:RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity;P:transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter;C:transcription factor TFIIF complex, mitochondrion;MFPO O.I. C.G. H.G.
78.8 99.9 47.1 At2g04230 814960 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
77.8 99.9 73.9 At1g49890 841412 unknown protein F:unknown;P:unknown;C:chloroplast;OMFBPVA O.I. C.G. H.G.
77.1 99.9 99.7 At1g69526 843287 UbiE/COQ5 methyltransferase family protein F:methyltransferase activity;P:unknown;C:chloroplast;PBO O.I. C.G. H.G.
76.6 99.9 66.1 At2g38090 818387 myb family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMOF O.I. C.G. H.G.
76.0 99.9 40.2 At3g26680 822280 SNM1 (SENSITIVE TO NITROGEN MUSTARD 1) involved in a SNM-dependent recombinational repair process of oxidatively induced DNA damage. O.I. C.G. H.G.
75.5 99.9 82.9 At5g12290 831104 DGS1 (DGD1 SUPPRESSOR 1) Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background. O.I. C.G. H.G.
74.9 99.9 70.4 At4g18610 827595 LSH9 (LIGHT SENSITIVE HYPOCOTYLS 9) F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PM O.I. C.G. H.G.
74.8 99.9 35.7 At1g43590 840943 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
73.8 99.9 37.4 At5g02010 831858 ROPGEF7 Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. O.I. C.G. H.G.
73.5 99.9 60.4 At1g67570 843078 unknown protein F:unknown;P:unknown;C:nucleus;PO O.I. C.G. H.G.
73.4 99.9 55.3 At3g24450 822035 copper-binding family protein F:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:endomembrane system;POM O.I. C.G. H.G.
73.2 99.9 43.1 At5g24830 832552 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:unknown;POMFBA O.I. C.G. H.G.
72.7 99.9 107.1 At5g08535 830753 D111/G-patch domain-containing protein F:nucleic acid binding;P:biological_process unknown;C:intracellular, chloroplast;MPFO O.I. C.G. H.G.
72.3 99.9 130.6 At5g11900 831063 eukaryotic translation initiation factor SUI1 family protein F:translation initiation factor activity;P:translational initiation;C:cellular_component unknown;MFOP O.I. C.G. H.G.
70.3 99.9 124.0 At5g24380 832509 YSL2 (YELLOW STRIPE LIKE 2) closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1 O.I. C.G. H.G.
70.3 99.9 83.1 At1g14130 837972 2-oxoglutarate-dependent dioxygenase, putative F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:nucleus;POBFM O.I. C.G. H.G.
69.4 99.9 26.5 At3g43690 3769597 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
69.3 99.9 29.2 At5g08600 830761 U3 ribonucleoprotein (Utp) family protein F:molecular_function unknown;P:rRNA processing;C:small-subunit processome;OMFBPVA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
432.4	100.0	121.4	At5g26330	832702	plastocyanin-like domain-containing protein / mavicyanin, putative	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PF	O.I.	C.G.	H.G.
334.7	100.0	102.4	At2g04850	815031	auxin-responsive protein-related	F:unknown;P:unknown;C:membrane;PMFOB	O.I.	C.G.	H.G.
270.7	100.0	129.5	At3g59480	825117	pfkB-type carbohydrate kinase family protein	F:kinase activity, ribokinase activity;P:D-ribose metabolic process, acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:cellular_component unknown;BOPAMF	O.I.	C.G.	H.G.
231.2	100.0	101.4	At5g51500	835224	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
226.6	100.0	35.5	At5g56370	835738	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
225.6	100.0	58.8	At4g29230	829044	anac075 (Arabidopsis NAC domain containing protein 75)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOFBV	O.I.	C.G.	H.G.
215.0	100.0	107.2	At1g67420	843062	peptidase	F:peptidase activity;P:proteolysis;C:endomembrane system;MBFOPA	O.I.	C.G.	H.G.
201.6	100.0	53.7	At2g37210	818298	-	Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.	O.I.	C.G.	H.G.
199.1	100.0	89.6	At5g59700	836091	protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
198.9	100.0	127.7	At1g68810	843213	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOB	O.I.	C.G.	H.G.
195.9	100.0	74.7	At1g75520	843888	SRS5 (SHI-RELATED SEQUENCE 5)	A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.	O.I.	C.G.	H.G.
185.9	100.0	134.7	At4g32880	829424	ATHB-8 (HOMEOBOX GENE 8)	member of homeodomain-leucine zipper family, acting as a differentiation-promoting transcription factor of the vascular meristems.	O.I.	C.G.	H.G.
181.7	100.0	53.5	At1g69430	843275	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
177.4	100.0	172.8	At5g13300	831171	SFC (SCARFACE)	Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.	O.I.	C.G.	H.G.
164.5	100.0	76.0	At1g31320	840020	LBD4 (LOB DOMAIN-CONTAINING PROTEIN 4)	F:unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
160.9	99.9	93.5	At1g70500	843386	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
155.6	99.9	180.0	At5g18830	832001	SPL7 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7)	Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c.	O.I.	C.G.	H.G.
153.0	99.9	44.1	At5g06710	830560	HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA)	Homeobox-leucine zipper protein.	O.I.	C.G.	H.G.
145.0	99.9	34.7	At1g63520	842657	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
144.2	99.9	159.0	At3g10080	820169	germin-like protein, putative	F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PBFOM	O.I.	C.G.	H.G.
143.1	99.9	62.6	At5g12350	831110	Ran GTPase binding / chromatin binding / zinc ion binding	F:chromatin binding, zinc ion binding, Ran GTPase binding;P:unknown;C:plasma membrane;MOBPFAV	O.I.	C.G.	H.G.
142.4	99.9	149.4	At1g50120	841434	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFO	O.I.	C.G.	H.G.
142.0	99.9	76.3	At5g16490	831510	RIC4 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 4)	encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). It interacts with Rop1 and is involved in pollen tube growth and function, and exocytosis in the pollen tube tip. Protein most similar to RIC2 (family subgroup V). Gene is expressed in all tissues examined.Interacts with ROP2 during pavement cell morphogenesis and with ROP1 to promote apical F-actin assembly.	O.I.	C.G.	H.G.
141.9	99.9	57.2	At5g07800	830673	flavin-containing monooxygenase family protein / FMO family protein	F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
139.4	99.9	52.4	At1g79620	844301	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
135.9	99.9	116.4	At1g50240	841446	-	-	O.I.	C.G.	H.G.
133.1	99.9	204.7	At5g13330	831174	Rap2.6L (related to AP2 6L)	encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.	O.I.	C.G.	H.G.
131.4	99.9	174.2	At5g19530	832073	ACL5 (ACAULIS 5)	Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.	O.I.	C.G.	H.G.
130.3	99.9	70.0	At1g49980	841422	DNA-directed DNA polymerase/ damaged DNA binding	F:damaged DNA binding, DNA-directed DNA polymerase activity;P:DNA repair;C:membrane;BOMFAP	O.I.	C.G.	H.G.
129.7	99.9	97.9	At5g12400	831115	PHD finger transcription factor, putative	F:protein binding, DNA binding, zinc ion binding;P:regulation of transcription, DNA-dependent;C:nucleus;MPOFB	O.I.	C.G.	H.G.
128.1	99.9	74.7	At5g12260	831101	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFB	O.I.	C.G.	H.G.
127.6	99.9	35.7	At1g67370	843058	ASY1 (ASYNAPTIC 1)	meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.	O.I.	C.G.	H.G.
126.5	99.9	299.9	At5g59290	836047	UXS3 (UDP-GLUCURONIC ACID DECARBOXYLASE 3)	Encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be cytosolic by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.	O.I.	C.G.	H.G.
125.7	99.9	212.9	At5g26270	832696	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MP	O.I.	C.G.	H.G.
125.3	99.9	170.6	At2g03200	814849	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFMO	O.I.	C.G.	H.G.
123.3	99.9	90.1	At1g23460	838954	polygalacturonase	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
121.1	99.9	56.9	At5g12870	831127	MYB46 (MYB DOMAIN PROTEIN 46)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
119.6	99.9	49.0	At5g14470	831298	GHMP kinase-related	F:kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding;P:metabolic process, phosphorylation;C:cytoplasm;BOPAM	O.I.	C.G.	H.G.
117.3	99.9	60.9	At3g55890	824755	yippee family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
112.0	99.9	15.7	At3g26010	822198	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
111.9	99.9	105.6	At1g67620	843083	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMP	O.I.	C.G.	H.G.
111.2	99.9	87.5	At3g48185	823974	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
111.1	99.9	193.8	At3g26720	822284	glycosyl hydrolase family 38 protein	F:in 6 functions;P:mannose metabolic process, carbohydrate metabolic process;C:plasma membrane, vacuole, plant-type cell wall;MOPBFA	O.I.	C.G.	H.G.
110.4	99.9	29.1	At1g77655	844101	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
109.9	99.9	133.7	At1g51140	841537	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;POFM	O.I.	C.G.	H.G.
109.0	99.9	37.5	At3g23060	821880	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MOPFBV	O.I.	C.G.	H.G.
108.1	99.9	76.7	At5g65970	836727	MLO10 (MILDEW RESISTANCE LOCUS O 10)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s	O.I.	C.G.	H.G.
106.5	99.9	51.8	At5g08360	830734	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
104.4	99.9	57.0	At1g47230	841126	cyclin, putative	F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFV	O.I.	C.G.	H.G.
103.7	99.9	117.5	At1g67320	843052	DNA primase, large subunit family	F:DNA primase activity;P:DNA replication, synthesis of RNA primer;C:alpha DNA polymerase:primase complex;MFOPA	O.I.	C.G.	H.G.
102.7	99.9	106.2	At1g49950	841418	DNA-binding protein, putative	Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.	O.I.	C.G.	H.G.
100.9	99.9	62.4	At2g38340	818414	AP2 domain-containing transcription factor, putative (DRE2B)	encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.	O.I.	C.G.	H.G.
100.9	99.9	36.1	At1g71930	843524	VND7 (VASCULAR RELATED NAC-DOMAIN PROTEIN 7)	Encodes a NAC-domain transcription factor with transcriptional activation activity that is involved in xylem formation. Induces transdifferentiation of various cells into protoxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.	O.I.	C.G.	H.G.
100.6	99.9	134.4	At1g78780	844214	pathogenesis-related family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFM	O.I.	C.G.	H.G.
99.9	99.9	47.6	At3g47950	823950	AHA4	mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase	O.I.	C.G.	H.G.
97.9	99.9	23.0	At1g76250	843958	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;POM	O.I.	C.G.	H.G.
97.7	99.9	119.9	At4g25530	828658	FWA	Encodes a homeodomain-containing transcription factor that controls flowering. FWA is silenced in wild type plants and reverse of the imprinted silencing causes a late flowering phenotype. FWA gene contains two tandem repeats around the transcription start site that are necessary and sufficient for silencing via DNA methylation.	O.I.	C.G.	H.G.
97.4	99.9	164.4	At5g08500	830749	transmembrane CLPTM1 family protein	F:unknown;P:biological_process unknown;C:unknown;MOFP	O.I.	C.G.	H.G.
96.6	99.9	27.2	At1g50150		-	-	O.I.	C.G.	H.G.
95.9	99.9	100.1	At5g59710	836092	VIP2 (VIRE2 INTERACTING PROTEIN2)	Encodes a nuclear-localized NOT (negative on TATA-less) domain-containing protein that interacts with the Agrobacterium VirE2 protein and is required for Agrobacterium-mediated plant transformation. It likely facilitates T-DNA integration into plant chromosomes and may play a role as a transcriptional regulator.	O.I.	C.G.	H.G.
94.9	99.9	81.2	At5g11890	831062	-	F:molecular_function unknown;P:unknown;C:plasma membrane;PO	O.I.	C.G.	H.G.
94.6	99.9	63.6	At1g67600	843081	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOP	O.I.	C.G.	H.G.
94.4	99.9	76.4	At5g14530	831304	transducin family protein / WD-40 repeat family protein	F:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MBFOPA	O.I.	C.G.	H.G.
93.8	99.9	57.5	At1g30650	839945	WRKY14	member of WRKY Transcription Factor; Group II-e	O.I.	C.G.	H.G.
92.9	99.9	122.0	At5g50260	835091	cysteine proteinase, putative	F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
91.6	99.9	78.1	At1g50140	841436	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
90.9	99.9	41.5	At5g45020	834533	-	F:unknown;P:unknown;C:cellular_component unknown;BOFPMA	O.I.	C.G.	H.G.
90.4	99.9	39.0	At3g26850	822300	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOV	O.I.	C.G.	H.G.
90.1	99.9	52.0	At1g67410	843061	exostosin family protein	F:catalytic activity;P:biological_process unknown;C:endomembrane system, membrane;PMOBF	O.I.	C.G.	H.G.
89.7	99.9	94.5	At1g71940	843525	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPFA	O.I.	C.G.	H.G.
88.3	99.9	53.0	At5g14510	831302	armadillo/beta-catenin repeat family protein	F:binding;P:biological_process unknown;C:cellular_component unknown;PFOM	O.I.	C.G.	H.G.
88.2	99.9	375.2	At1g51160	841539	synbindin, putative	F:molecular_function unknown;P:transport, ER to Golgi vesicle-mediated transport;C:cis-Golgi network;MFOP	O.I.	C.G.	H.G.
88.2	99.9	132.2	At5g18850	832003	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
88.1	99.9	33.8	At5g02640	831166	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
87.0	99.9	81.5	At1g72740	843606	DNA-binding family protein / histone H1/H5 family protein	F:transcription factor activity;P:nucleosome assembly, regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
85.7	99.9	79.8	At5g24710	832542	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOBFPVA	O.I.	C.G.	H.G.
85.2	99.9	23.0	At5g07720	830665	galactosyl transferase GMA12/MNN10 family protein	F:transferase activity, transferring glycosyl groups, transferase activity;P:biological_process unknown;C:integral to membrane;PFO	O.I.	C.G.	H.G.
84.8	99.9	100.5	At5g18780	831996	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
83.7	99.9	68.3	At1g14240	837985	nucleoside phosphatase family protein / GDA1/CD39 family protein	F:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;MFPOB	O.I.	C.G.	H.G.
82.8	99.9	43.4	At2g38320	818412	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PMO	O.I.	C.G.	H.G.
82.7	99.9	23.0	At2g46760	819289	FAD-binding domain-containing protein	F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:membrane;BOFPMA	O.I.	C.G.	H.G.
81.0	99.9	139.6	At1g75510	843887	transcription initiation factor IIF beta subunit (TFIIF-beta) family protein	F:RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity;P:transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter;C:transcription factor TFIIF complex, mitochondrion;MFPO	O.I.	C.G.	H.G.
78.8	99.9	47.1	At2g04230	814960	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
77.8	99.9	73.9	At1g49890	841412	unknown protein	F:unknown;P:unknown;C:chloroplast;OMFBPVA	O.I.	C.G.	H.G.
77.1	99.9	99.7	At1g69526	843287	UbiE/COQ5 methyltransferase family protein	F:methyltransferase activity;P:unknown;C:chloroplast;PBO	O.I.	C.G.	H.G.
76.6	99.9	66.1	At2g38090	818387	myb family transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMOF	O.I.	C.G.	H.G.
76.0	99.9	40.2	At3g26680	822280	SNM1 (SENSITIVE TO NITROGEN MUSTARD 1)	involved in a SNM-dependent recombinational repair process of oxidatively induced DNA damage.	O.I.	C.G.	H.G.
75.5	99.9	82.9	At5g12290	831104	DGS1 (DGD1 SUPPRESSOR 1)	Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background.	O.I.	C.G.	H.G.
74.9	99.9	70.4	At4g18610	827595	LSH9 (LIGHT SENSITIVE HYPOCOTYLS 9)	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PM	O.I.	C.G.	H.G.
74.8	99.9	35.7	At1g43590	840943	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
73.8	99.9	37.4	At5g02010	831858	ROPGEF7	Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.	O.I.	C.G.	H.G.
73.5	99.9	60.4	At1g67570	843078	unknown protein	F:unknown;P:unknown;C:nucleus;PO	O.I.	C.G.	H.G.
73.4	99.9	55.3	At3g24450	822035	copper-binding family protein	F:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:endomembrane system;POM	O.I.	C.G.	H.G.
73.2	99.9	43.1	At5g24830	832552	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:biological_process unknown;C:unknown;POMFBA	O.I.	C.G.	H.G.
72.7	99.9	107.1	At5g08535	830753	D111/G-patch domain-containing protein	F:nucleic acid binding;P:biological_process unknown;C:intracellular, chloroplast;MPFO	O.I.	C.G.	H.G.
72.3	99.9	130.6	At5g11900	831063	eukaryotic translation initiation factor SUI1 family protein	F:translation initiation factor activity;P:translational initiation;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
70.3	99.9	124.0	At5g24380	832509	YSL2 (YELLOW STRIPE LIKE 2)	closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1	O.I.	C.G.	H.G.
70.3	99.9	83.1	At1g14130	837972	2-oxoglutarate-dependent dioxygenase, putative	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:nucleus;POBFM	O.I.	C.G.	H.G.
69.4	99.9	26.5	At3g43690	3769597	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
69.3	99.9	29.2	At5g08600	830761	U3 ribonucleoprotein (Utp) family protein	F:molecular_function unknown;P:rRNA processing;C:small-subunit processome;OMFBPVA	O.I.	C.G.	H.G.

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GSM ID	GSM133960
Assay name	Fukuda_1-5_4A_Rep1_ATH1
GSE experiment	GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.

Microarray experiments to specifically-expressed genes

GSM ID GSM133960 Assay name Fukuda_1-5_4A_Rep1_ATH1 GSE experiment GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.

GSM ID GSM133960

Assay name Fukuda_1-5_4A_Rep1_ATH1

GSE experiment GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.