CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133957

Assay name Fukuda_1-2_0B_Rep2_ATH1

GSE experiment GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
1657.3 100.0 125.0 At1g51190 841542 PLT2 (PLETHORA 2) Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors. O.I. C.G. H.G.
1434.9 100.0 247.7 At1g67600 843081 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOP O.I. C.G. H.G.
1273.2 100.0 64.0 At1g80100 844350 AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6) AHP6 lacks the conserved histidine residue (Asn83 in AHP6b), which is required for phosphotransfer, present in the other AHPs. AHP6 does not appear to have phosphotransfer activity. Acts as an inhibitor of cytokinin signaling by interacting with the phosphorelay machinery. Expressed in developing protoxylem and associated pericycle cell files. Negative regulator of cytokinin signaling. Expression is down-regulated by cytokinins. There are two alternatively spliced genes for this locus, AHP6a and AHP6b, differing in the length of the first exon. In ahp6-2 seedlings, only the AHP6a transcript is present. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6). O.I. C.G. H.G.
1148.5 100.0 102.9 At1g70080 843344 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PO O.I. C.G. H.G.
789.9 100.0 102.2 At1g63020 842605 NRPD1A (NUCLEAR RNA POLYMERASE D 1A) Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing. O.I. C.G. H.G.
681.6 100.0 77.0 At2g03830 814909 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
671.2 100.0 155.1 At5g08565 830757 positive transcription elongation factor/ zinc ion binding F:positive transcription elongation factor activity, zinc ion binding;P:positive regulation of transcription;C:nucleus;MFOP O.I. C.G. H.G.
634.1 100.0 115.6 At1g79580 844296 SMB (SOMBRERO) NAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions. O.I. C.G. H.G.
626.2 100.0 122.3 At2g34080 817969 cysteine proteinase, putative F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
616.7 100.0 86.3 At3g44520 - - O.I. C.G. H.G.
610.4 100.0 162.0 At2g04460 814986 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
604.5 100.0 131.3 At1g75520 843888 SRS5 (SHI-RELATED SEQUENCE 5) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. O.I. C.G. H.G.
487.0 100.0 202.6 At1g50110 841433 branched-chain amino acid aminotransferase 6 / branched-chain amino acid transaminase 6 (BCAT6) F:branched-chain-amino-acid transaminase activity, catalytic activity;P:branched chain family amino acid metabolic process, metabolic process;C:cellular_component unknown;BOFMPA O.I. C.G. H.G.
308.0 100.0 302.4 At2g11810 815657 MGDC MGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions. O.I. C.G. H.G.
306.1 100.0 108.4 At4g23590 828459 aminotransferase class I and II family protein F:1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity;P:cellular amino acid and derivative metabolic process, biosynthetic process;C:cellular_component unknown;BOPMAF O.I. C.G. H.G.
287.9 100.0 113.0 At1g36060 840510 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. O.I. C.G. H.G.
286.0 100.0 101.5 At3g05630 819730 PLDP2 Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning. O.I. C.G. H.G.
268.1 100.0 65.8 At3g44510 823576 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB O.I. C.G. H.G.
246.5 100.0 55.7 At1g52470 841678 hydrolase F:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
232.8 100.0 30.9 At4g25160 828619 protein kinase family protein F:ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, protein ubiquitination, response to stress;C:ubiquitin ligase complex;MPOBFVA O.I. C.G. H.G.
213.0 100.0 46.1 At1g67370 843058 ASY1 (ASYNAPTIC 1) meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal. O.I. C.G. H.G.
205.8 100.0 115.5 At1g08310 837351 esterase/lipase/thioesterase family protein F:catalytic activity;P:biological_process unknown;C:unknown;BPOMFA O.I. C.G. H.G.
205.4 100.0 162.7 At1g69526 843287 UbiE/COQ5 methyltransferase family protein F:methyltransferase activity;P:unknown;C:chloroplast;PBO O.I. C.G. H.G.
203.1 100.0 60.7 At2g37890 818365 mitochondrial substrate carrier family protein F:transporter activity, binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO O.I. C.G. H.G.
199.1 100.0 21.9 At3g46800 823833 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMOF O.I. C.G. H.G.
197.3 100.0 111.2 At2g03020 814831 heat shock protein-related F:aspartic-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;PBO O.I. C.G. H.G.
196.7 100.0 66.3 At5g02200 830832 FHL (FAR-RED-ELONGATED HYPOCOTYL1-LIKE) Encodes a small plant-specific protein with both nuclear localization and nuclear export signals that is specifically required, together with FHY1, for the light-regulated nuclear accumulation of phyA. O.I. C.G. H.G.
194.4 100.0 129.5 At3g03530 821243 NPC4 (NONSPECIFIC PHOSPHOLIPASE C4) PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation. O.I. C.G. H.G.
190.9 100.0 146.7 At2g14210 815907 AGL44 (AGAMOUS-LIKE 44) MADS box gene, transcription factor O.I. C.G. H.G.
189.3 100.0 49.9 At1g50520 841474 CYP705A27 member of CYP705A O.I. C.G. H.G.
187.3 100.0 73.6 At1g23160 838924 auxin-responsive GH3 family protein F:unknown;P:response to auxin stimulus;C:unknown;OPBMF O.I. C.G. H.G.
182.0 100.0 117.8 At1g72740 843606 DNA-binding family protein / histone H1/H5 family protein F:transcription factor activity;P:nucleosome assembly, regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
179.0 100.0 61.7 At3g26680 822280 SNM1 (SENSITIVE TO NITROGEN MUSTARD 1) involved in a SNM-dependent recombinational repair process of oxidatively induced DNA damage. O.I. C.G. H.G.
178.4 100.0 261.6 At5g17340 831600 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
173.7 100.0 54.4 At1g43590 840943 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
173.0 100.0 58.3 At2g43140 818916 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOBF O.I. C.G. H.G.
171.1 100.0 254.5 At5g01220 831888 SQD2 (sulfoquinovosyldiacylglycerol 2) involved in sulfolipid biosynthesis O.I. C.G. H.G.
165.3 100.0 82.7 At5g14750 831327 ATMYB66 (MYB DOMAIN PROTEIN 66) Encodes a MyB-related protein containing R2 and R3 repeats, involved in root and hypocotyl epidermal cell fate determination. Loss of function mutations make extra root hairs. Nuclear localized protein is a positive regulator for expression of CAPRICE (CPC). O.I. C.G. H.G.
156.6 99.9 49.3 At3g43110 823370 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
156.5 99.9 74.3 At4g33770 829519 inositol 1,3,4-trisphosphate 5/6-kinase family protein F:inositol or phosphatidylinositol kinase activity, magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, inositol tetrakisphosphate 1-kinase activity, ATP binding;P:inositol trisphosphate metabolic process;C:intracellular;PMO O.I. C.G. H.G.
149.0 99.9 95.1 At1g52940 841727 PAP5 (PURPLE ACID PHOSPHATASE 5) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBOMFA O.I. C.G. H.G.
146.8 99.9 96.4 At5g05860 830471 UGT76C2 F:in 6 functions;P:metabolic process;C:unknown;PMBVOF O.I. C.G. H.G.
144.5 99.9 58.7 At3g01070 821257 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;P O.I. C.G. H.G.
143.1 99.9 74.2 At3g47600 823914 ATMYB94 (MYB DOMAIN PROTEIN 94) Encodes a putative transcription factor (MYB94). O.I. C.G. H.G.
139.6 99.9 185.4 At3g30720 822807 QQS (QUA-QUINE STARCH) F:molecular_function unknown;P:starch biosynthetic process;C:cytosol;P O.I. C.G. H.G.
135.9 99.9 221.4 At5g26270 832696 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MP O.I. C.G. H.G.
135.9 99.9 74.5 At5g12330 831108 LRP1 (LATERAL ROOT PRIMORDIUM 1) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation. O.I. C.G. H.G.
134.9 99.9 62.7 At5g18770 831995 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
133.9 99.9 177.8 At5g11900 831063 eukaryotic translation initiation factor SUI1 family protein F:translation initiation factor activity;P:translational initiation;C:cellular_component unknown;MFOP O.I. C.G. H.G.
133.7 99.9 97.3 At5g18860 832004 inosine-uridine preferring nucleoside hydrolase family protein F:hydrolase activity;P:biological_process unknown;C:cell wall;BOMPFA O.I. C.G. H.G.
132.5 99.9 35.9 At5g11940 831067 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM O.I. C.G. H.G.
131.5 99.9 34.1 At4g36260 829783 STY2 (STYLISH 2) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Encodes protein with a single zinc finger motif and a members of a small gene family of putative transcription factors in which the SHORT INTERNODES (SHI) gene is found. STY2/STY1 double mutants showed defective style, stigma as well as serrated leaves. O.I. C.G. H.G.
131.1 99.9 26.0 At2g38940 818479 ATPT2 (ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2) phosphate transporter (AtPT2) O.I. C.G. H.G.
130.1 99.9 115.0 At5g58560 835969 phosphatidate cytidylyltransferase family protein F:phosphatidate cytidylyltransferase activity, transferase activity, transferring phosphorus-containing groups;P:phospholipid biosynthetic process;C:membrane;BOPFA O.I. C.G. H.G.
127.1 99.9 103.2 At1g23140 838922 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPFO O.I. C.G. H.G.
126.9 99.9 141.2 At1g72830 843614 NF-YA3 (NUCLEAR FACTOR Y, SUBUNIT A3) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. O.I. C.G. H.G.
121.9 99.9 132.7 At4g03960 825706 tyrosine specific protein phosphatase family protein F:phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity;P:dephosphorylation;C:cellular_component unknown;FPOBM O.I. C.G. H.G.
108.0 99.9 134.8 At1g67560 843077 lipoxygenase family protein F:electron carrier activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding;P:growth;C:chloroplast;PMBFO O.I. C.G. H.G.
103.6 99.9 181.0 At3g26730 822285 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:biological_process unknown;C:chloroplast;OMFPBVA O.I. C.G. H.G.
103.5 99.9 108.5 At1g10480 837588 ZFP5 (ZINC FINGER PROTEIN 5) Encodes a zinc finger protein containing only a single zinc finger. O.I. C.G. H.G.
100.7 99.9 64.2 At3g04570 819613 DNA-binding protein-related F:unknown;P:biological_process unknown;C:unknown;BPMOFVA O.I. C.G. H.G.
98.7 99.9 125.1 At2g46880 819301 PAP14 (PURPLE ACID PHOSPHATASE 14) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPO O.I. C.G. H.G.
97.9 99.9 98.8 At1g50240 841446 - - O.I. C.G. H.G.
95.9 99.9 143.3 At1g50660 841488 unknown protein F:unknown;P:biological_process unknown;C:chloroplast;MOBFPAV O.I. C.G. H.G.
95.3 99.9 284.7 At1g17710 838347 phosphatase F:phosphatase activity;P:metabolic process;C:unknown;MPOBF O.I. C.G. H.G.
95.2 99.9 173.9 At5g09570 830816 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFO O.I. C.G. H.G.
94.0 99.9 71.6 At5g10510 830915 AIL6 (AINTEGUMENTA-LIKE 6) Encodes an AP2-domain transcription factor involved in root stem cell identity and root development. O.I. C.G. H.G.
93.9 99.9 96.7 At1g67620 843083 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMP O.I. C.G. H.G.
88.1 99.9 52.9 At1g77850 844120 ARF17 (AUXIN RESPONSE FACTOR 17) Posttranscriptionally regulated by miR160 and is essential for proper development.Regulates early auxin response genes. O.I. C.G. H.G.
87.7 99.9 108.0 At1g67320 843052 DNA primase, large subunit family F:DNA primase activity;P:DNA replication, synthesis of RNA primer;C:alpha DNA polymerase:primase complex;MFOPA O.I. C.G. H.G.
87.1 99.9 181.2 At5g12370 831112 SEC10 (EXOCYST COMPLEX COMPONENT SEC10) F:molecular_function unknown;P:exocytosis, vesicle docking;C:plasma membrane, membrane, exocyst;FMPOB O.I. C.G. H.G.
87.1 99.9 89.1 At5g12290 831104 DGS1 (DGD1 SUPPRESSOR 1) Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background. O.I. C.G. H.G.
86.7 99.9 22.6 At2g46940 819308 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
83.1 99.9 105.7 At5g25170 832588 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPOF O.I. C.G. H.G.
81.6 99.9 81.2 At2g28350 817382 ARF10 (AUXIN RESPONSE FACTOR 10) Involved in root cap cell differentiation. O.I. C.G. H.G.
76.9 99.9 63.6 At5g58500 835963 LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5) F:molecular_function unknown;P:biological_process unknown;C:unknown;PM O.I. C.G. H.G.
76.9 99.9 53.3 At5g13310 831172 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFP O.I. C.G. H.G.
76.8 99.9 108.1 At1g51420 841567 SPP1 (SUCROSE-PHOSPHATASE 1) F:phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity;P:sucrose biosynthetic process, metabolic process;C:plasma membrane;BPO O.I. C.G. H.G.
76.5 99.9 95.4 At5g18780 831996 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
74.7 99.9 63.2 At1g67420 843062 peptidase F:peptidase activity;P:proteolysis;C:endomembrane system;MBFOPA O.I. C.G. H.G.
74.3 99.9 133.7 At1g75510 843887 transcription initiation factor IIF beta subunit (TFIIF-beta) family protein F:RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity;P:transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter;C:transcription factor TFIIF complex, mitochondrion;MFPO O.I. C.G. H.G.
73.6 99.9 60.2 At1g10990 837642 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
73.2 99.9 32.5 At5g62180 836339 AtCXE20 (Arabidopsis thaliana carboxyesterase 20) F:carboxylesterase activity;P:metabolic process;C:cellular_component unknown;BOPFMAV O.I. C.G. H.G.
72.4 99.9 14.4 At4g21730 3770093 - pseudogene of N-ethylmaleimide sensitive factor (NSF) O.I. C.G. H.G.
71.8 99.9 80.1 At3g14680 820696 CYP72A14 putative cytochrome P450 O.I. C.G. H.G.
71.1 99.9 274.5 At1g73010 843632 phosphatase F:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBF O.I. C.G. H.G.
69.6 99.9 138.9 At5g08500 830749 transmembrane CLPTM1 family protein F:unknown;P:biological_process unknown;C:unknown;MOFP O.I. C.G. H.G.
69.4 99.9 55.8 At3g52310 824396 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMFAPV O.I. C.G. H.G.
68.6 99.9 151.9 At2g19590 816478 ACO1 (ACC OXIDASE 1) encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase O.I. C.G. H.G.
67.4 99.8 54.8 At5g06330 830521 hairpin-responsive protein, putative (HIN1) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
67.3 99.8 77.7 At3g03310 821286 lecithin:cholesterol acyltransferase family protein / LACT family protein F:phosphatidylcholine-sterol O-acyltransferase activity;P:lipid metabolic process;C:cellular_component unknown;MOPBFA O.I. C.G. H.G.
66.8 99.8 238.5 At1g51070 841529 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;POMBFAV O.I. C.G. H.G.
66.4 99.8 53.2 At3g22930 821865 calmodulin, putative F:calcium ion binding;P:biological_process unknown;C:unknown;MOFPBV O.I. C.G. H.G.
66.1 99.8 74.3 At5g26110 832680 ATP binding / catalytic/ protein kinase F:protein kinase activity, catalytic activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;BOMAFP O.I. C.G. H.G.
65.4 99.8 57.6 At1g66800 842998 cinnamyl-alcohol dehydrogenase family / CAD family similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase O.I. C.G. H.G.
65.0 99.8 52.2 At1g72890 843620 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMO O.I. C.G. H.G.
64.6 99.8 27.0 At5g43690 834389 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPOBF O.I. C.G. H.G.
64.5 99.8 28.9 At3g23060 821880 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOPFBV O.I. C.G. H.G.
64.2 99.8 30.3 At2g37210 818298 - Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950. O.I. C.G. H.G.
63.8 99.8 83.7 At1g49950 841418 DNA-binding protein, putative Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
1657.3	100.0	125.0	At1g51190	841542	PLT2 (PLETHORA 2)	Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors.	O.I.	C.G.	H.G.
1434.9	100.0	247.7	At1g67600	843081	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BOP	O.I.	C.G.	H.G.
1273.2	100.0	64.0	At1g80100	844350	AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6)	AHP6 lacks the conserved histidine residue (Asn83 in AHP6b), which is required for phosphotransfer, present in the other AHPs. AHP6 does not appear to have phosphotransfer activity. Acts as an inhibitor of cytokinin signaling by interacting with the phosphorelay machinery. Expressed in developing protoxylem and associated pericycle cell files. Negative regulator of cytokinin signaling. Expression is down-regulated by cytokinins. There are two alternatively spliced genes for this locus, AHP6a and AHP6b, differing in the length of the first exon. In ahp6-2 seedlings, only the AHP6a transcript is present. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).	O.I.	C.G.	H.G.
1148.5	100.0	102.9	At1g70080	843344	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PO	O.I.	C.G.	H.G.
789.9	100.0	102.2	At1g63020	842605	NRPD1A (NUCLEAR RNA POLYMERASE D 1A)	Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing.	O.I.	C.G.	H.G.
681.6	100.0	77.0	At2g03830	814909	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
671.2	100.0	155.1	At5g08565	830757	positive transcription elongation factor/ zinc ion binding	F:positive transcription elongation factor activity, zinc ion binding;P:positive regulation of transcription;C:nucleus;MFOP	O.I.	C.G.	H.G.
634.1	100.0	115.6	At1g79580	844296	SMB (SOMBRERO)	NAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions.	O.I.	C.G.	H.G.
626.2	100.0	122.3	At2g34080	817969	cysteine proteinase, putative	F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
616.7	100.0	86.3	At3g44520		-	-	O.I.	C.G.	H.G.
610.4	100.0	162.0	At2g04460	814986	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
604.5	100.0	131.3	At1g75520	843888	SRS5 (SHI-RELATED SEQUENCE 5)	A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.	O.I.	C.G.	H.G.
487.0	100.0	202.6	At1g50110	841433	branched-chain amino acid aminotransferase 6 / branched-chain amino acid transaminase 6 (BCAT6)	F:branched-chain-amino-acid transaminase activity, catalytic activity;P:branched chain family amino acid metabolic process, metabolic process;C:cellular_component unknown;BOFMPA	O.I.	C.G.	H.G.
308.0	100.0	302.4	At2g11810	815657	MGDC	MGD3 is the major enzyme for galactolipid metabolism during phosphate starvation. Does not contribute to galactolipid synthesis under P1-sufficient conditions.	O.I.	C.G.	H.G.
306.1	100.0	108.4	At4g23590	828459	aminotransferase class I and II family protein	F:1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity;P:cellular amino acid and derivative metabolic process, biosynthetic process;C:cellular_component unknown;BOPMAF	O.I.	C.G.	H.G.
287.9	100.0	113.0	At1g36060	840510	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.	O.I.	C.G.	H.G.
286.0	100.0	101.5	At3g05630	819730	PLDP2	Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning.	O.I.	C.G.	H.G.
268.1	100.0	65.8	At3g44510	823576	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PB	O.I.	C.G.	H.G.
246.5	100.0	55.7	At1g52470	841678	hydrolase	F:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
232.8	100.0	30.9	At4g25160	828619	protein kinase family protein	F:ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, protein ubiquitination, response to stress;C:ubiquitin ligase complex;MPOBFVA	O.I.	C.G.	H.G.
213.0	100.0	46.1	At1g67370	843058	ASY1 (ASYNAPTIC 1)	meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.	O.I.	C.G.	H.G.
205.8	100.0	115.5	At1g08310	837351	esterase/lipase/thioesterase family protein	F:catalytic activity;P:biological_process unknown;C:unknown;BPOMFA	O.I.	C.G.	H.G.
205.4	100.0	162.7	At1g69526	843287	UbiE/COQ5 methyltransferase family protein	F:methyltransferase activity;P:unknown;C:chloroplast;PBO	O.I.	C.G.	H.G.
203.1	100.0	60.7	At2g37890	818365	mitochondrial substrate carrier family protein	F:transporter activity, binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO	O.I.	C.G.	H.G.
199.1	100.0	21.9	At3g46800	823833	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMOF	O.I.	C.G.	H.G.
197.3	100.0	111.2	At2g03020	814831	heat shock protein-related	F:aspartic-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
196.7	100.0	66.3	At5g02200	830832	FHL (FAR-RED-ELONGATED HYPOCOTYL1-LIKE)	Encodes a small plant-specific protein with both nuclear localization and nuclear export signals that is specifically required, together with FHY1, for the light-regulated nuclear accumulation of phyA.	O.I.	C.G.	H.G.
194.4	100.0	129.5	At3g03530	821243	NPC4 (NONSPECIFIC PHOSPHOLIPASE C4)	PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation.	O.I.	C.G.	H.G.
190.9	100.0	146.7	At2g14210	815907	AGL44 (AGAMOUS-LIKE 44)	MADS box gene, transcription factor	O.I.	C.G.	H.G.
189.3	100.0	49.9	At1g50520	841474	CYP705A27	member of CYP705A	O.I.	C.G.	H.G.
187.3	100.0	73.6	At1g23160	838924	auxin-responsive GH3 family protein	F:unknown;P:response to auxin stimulus;C:unknown;OPBMF	O.I.	C.G.	H.G.
182.0	100.0	117.8	At1g72740	843606	DNA-binding family protein / histone H1/H5 family protein	F:transcription factor activity;P:nucleosome assembly, regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
179.0	100.0	61.7	At3g26680	822280	SNM1 (SENSITIVE TO NITROGEN MUSTARD 1)	involved in a SNM-dependent recombinational repair process of oxidatively induced DNA damage.	O.I.	C.G.	H.G.
178.4	100.0	261.6	At5g17340	831600	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
173.7	100.0	54.4	At1g43590	840943	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
173.0	100.0	58.3	At2g43140	818916	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOBF	O.I.	C.G.	H.G.
171.1	100.0	254.5	At5g01220	831888	SQD2 (sulfoquinovosyldiacylglycerol 2)	involved in sulfolipid biosynthesis	O.I.	C.G.	H.G.
165.3	100.0	82.7	At5g14750	831327	ATMYB66 (MYB DOMAIN PROTEIN 66)	Encodes a MyB-related protein containing R2 and R3 repeats, involved in root and hypocotyl epidermal cell fate determination. Loss of function mutations make extra root hairs. Nuclear localized protein is a positive regulator for expression of CAPRICE (CPC).	O.I.	C.G.	H.G.
156.6	99.9	49.3	At3g43110	823370	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
156.5	99.9	74.3	At4g33770	829519	inositol 1,3,4-trisphosphate 5/6-kinase family protein	F:inositol or phosphatidylinositol kinase activity, magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, inositol tetrakisphosphate 1-kinase activity, ATP binding;P:inositol trisphosphate metabolic process;C:intracellular;PMO	O.I.	C.G.	H.G.
149.0	99.9	95.1	At1g52940	841727	PAP5 (PURPLE ACID PHOSPHATASE 5)	F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:cellular_component unknown;PBOMFA	O.I.	C.G.	H.G.
146.8	99.9	96.4	At5g05860	830471	UGT76C2	F:in 6 functions;P:metabolic process;C:unknown;PMBVOF	O.I.	C.G.	H.G.
144.5	99.9	58.7	At3g01070	821257	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
143.1	99.9	74.2	At3g47600	823914	ATMYB94 (MYB DOMAIN PROTEIN 94)	Encodes a putative transcription factor (MYB94).	O.I.	C.G.	H.G.
139.6	99.9	185.4	At3g30720	822807	QQS (QUA-QUINE STARCH)	F:molecular_function unknown;P:starch biosynthetic process;C:cytosol;P	O.I.	C.G.	H.G.
135.9	99.9	221.4	At5g26270	832696	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MP	O.I.	C.G.	H.G.
135.9	99.9	74.5	At5g12330	831108	LRP1 (LATERAL ROOT PRIMORDIUM 1)	A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation.	O.I.	C.G.	H.G.
134.9	99.9	62.7	At5g18770	831995	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
133.9	99.9	177.8	At5g11900	831063	eukaryotic translation initiation factor SUI1 family protein	F:translation initiation factor activity;P:translational initiation;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
133.7	99.9	97.3	At5g18860	832004	inosine-uridine preferring nucleoside hydrolase family protein	F:hydrolase activity;P:biological_process unknown;C:cell wall;BOMPFA	O.I.	C.G.	H.G.
132.5	99.9	35.9	At5g11940	831067	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM	O.I.	C.G.	H.G.
131.5	99.9	34.1	At4g36260	829783	STY2 (STYLISH 2)	A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Encodes protein with a single zinc finger motif and a members of a small gene family of putative transcription factors in which the SHORT INTERNODES (SHI) gene is found. STY2/STY1 double mutants showed defective style, stigma as well as serrated leaves.	O.I.	C.G.	H.G.
131.1	99.9	26.0	At2g38940	818479	ATPT2 (ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2)	phosphate transporter (AtPT2)	O.I.	C.G.	H.G.
130.1	99.9	115.0	At5g58560	835969	phosphatidate cytidylyltransferase family protein	F:phosphatidate cytidylyltransferase activity, transferase activity, transferring phosphorus-containing groups;P:phospholipid biosynthetic process;C:membrane;BOPFA	O.I.	C.G.	H.G.
127.1	99.9	103.2	At1g23140	838922	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPFO	O.I.	C.G.	H.G.
126.9	99.9	141.2	At1g72830	843614	NF-YA3 (NUCLEAR FACTOR Y, SUBUNIT A3)	Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.	O.I.	C.G.	H.G.
121.9	99.9	132.7	At4g03960	825706	tyrosine specific protein phosphatase family protein	F:phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity;P:dephosphorylation;C:cellular_component unknown;FPOBM	O.I.	C.G.	H.G.
108.0	99.9	134.8	At1g67560	843077	lipoxygenase family protein	F:electron carrier activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding;P:growth;C:chloroplast;PMBFO	O.I.	C.G.	H.G.
103.6	99.9	181.0	At3g26730	822285	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:biological_process unknown;C:chloroplast;OMFPBVA	O.I.	C.G.	H.G.
103.5	99.9	108.5	At1g10480	837588	ZFP5 (ZINC FINGER PROTEIN 5)	Encodes a zinc finger protein containing only a single zinc finger.	O.I.	C.G.	H.G.
100.7	99.9	64.2	At3g04570	819613	DNA-binding protein-related	F:unknown;P:biological_process unknown;C:unknown;BPMOFVA	O.I.	C.G.	H.G.
98.7	99.9	125.1	At2g46880	819301	PAP14 (PURPLE ACID PHOSPHATASE 14)	F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;FBPO	O.I.	C.G.	H.G.
97.9	99.9	98.8	At1g50240	841446	-	-	O.I.	C.G.	H.G.
95.9	99.9	143.3	At1g50660	841488	unknown protein	F:unknown;P:biological_process unknown;C:chloroplast;MOBFPAV	O.I.	C.G.	H.G.
95.3	99.9	284.7	At1g17710	838347	phosphatase	F:phosphatase activity;P:metabolic process;C:unknown;MPOBF	O.I.	C.G.	H.G.
95.2	99.9	173.9	At5g09570	830816	-	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFO	O.I.	C.G.	H.G.
94.0	99.9	71.6	At5g10510	830915	AIL6 (AINTEGUMENTA-LIKE 6)	Encodes an AP2-domain transcription factor involved in root stem cell identity and root development.	O.I.	C.G.	H.G.
93.9	99.9	96.7	At1g67620	843083	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMP	O.I.	C.G.	H.G.
88.1	99.9	52.9	At1g77850	844120	ARF17 (AUXIN RESPONSE FACTOR 17)	Posttranscriptionally regulated by miR160 and is essential for proper development.Regulates early auxin response genes.	O.I.	C.G.	H.G.
87.7	99.9	108.0	At1g67320	843052	DNA primase, large subunit family	F:DNA primase activity;P:DNA replication, synthesis of RNA primer;C:alpha DNA polymerase:primase complex;MFOPA	O.I.	C.G.	H.G.
87.1	99.9	181.2	At5g12370	831112	SEC10 (EXOCYST COMPLEX COMPONENT SEC10)	F:molecular_function unknown;P:exocytosis, vesicle docking;C:plasma membrane, membrane, exocyst;FMPOB	O.I.	C.G.	H.G.
87.1	99.9	89.1	At5g12290	831104	DGS1 (DGD1 SUPPRESSOR 1)	Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background.	O.I.	C.G.	H.G.
86.7	99.9	22.6	At2g46940	819308	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
83.1	99.9	105.7	At5g25170	832588	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MPOF	O.I.	C.G.	H.G.
81.6	99.9	81.2	At2g28350	817382	ARF10 (AUXIN RESPONSE FACTOR 10)	Involved in root cap cell differentiation.	O.I.	C.G.	H.G.
76.9	99.9	63.6	At5g58500	835963	LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5)	F:molecular_function unknown;P:biological_process unknown;C:unknown;PM	O.I.	C.G.	H.G.
76.9	99.9	53.3	At5g13310	831172	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFP	O.I.	C.G.	H.G.
76.8	99.9	108.1	At1g51420	841567	SPP1 (SUCROSE-PHOSPHATASE 1)	F:phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity;P:sucrose biosynthetic process, metabolic process;C:plasma membrane;BPO	O.I.	C.G.	H.G.
76.5	99.9	95.4	At5g18780	831996	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
74.7	99.9	63.2	At1g67420	843062	peptidase	F:peptidase activity;P:proteolysis;C:endomembrane system;MBFOPA	O.I.	C.G.	H.G.
74.3	99.9	133.7	At1g75510	843887	transcription initiation factor IIF beta subunit (TFIIF-beta) family protein	F:RNA polymerase II transcription factor activity, general RNA polymerase II transcription factor activity, catalytic activity, ATP binding, ATP-dependent helicase activity;P:transcription initiation from RNA polymerase II promoter, transcription from RNA polymerase II promoter;C:transcription factor TFIIF complex, mitochondrion;MFPO	O.I.	C.G.	H.G.
73.6	99.9	60.2	At1g10990	837642	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
73.2	99.9	32.5	At5g62180	836339	AtCXE20 (Arabidopsis thaliana carboxyesterase 20)	F:carboxylesterase activity;P:metabolic process;C:cellular_component unknown;BOPFMAV	O.I.	C.G.	H.G.
72.4	99.9	14.4	At4g21730	3770093	-	pseudogene of N-ethylmaleimide sensitive factor (NSF)	O.I.	C.G.	H.G.
71.8	99.9	80.1	At3g14680	820696	CYP72A14	putative cytochrome P450	O.I.	C.G.	H.G.
71.1	99.9	274.5	At1g73010	843632	phosphatase	F:phosphatase activity;P:metabolic process;C:cellular_component unknown;MPOBF	O.I.	C.G.	H.G.
69.6	99.9	138.9	At5g08500	830749	transmembrane CLPTM1 family protein	F:unknown;P:biological_process unknown;C:unknown;MOFP	O.I.	C.G.	H.G.
69.4	99.9	55.8	At3g52310	824396	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:plasma membrane;BOMFAPV	O.I.	C.G.	H.G.
68.6	99.9	151.9	At2g19590	816478	ACO1 (ACC OXIDASE 1)	encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase	O.I.	C.G.	H.G.
67.4	99.8	54.8	At5g06330	830521	hairpin-responsive protein, putative (HIN1)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
67.3	99.8	77.7	At3g03310	821286	lecithin:cholesterol acyltransferase family protein / LACT family protein	F:phosphatidylcholine-sterol O-acyltransferase activity;P:lipid metabolic process;C:cellular_component unknown;MOPBFA	O.I.	C.G.	H.G.
66.8	99.8	238.5	At1g51070	841529	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;POMBFAV	O.I.	C.G.	H.G.
66.4	99.8	53.2	At3g22930	821865	calmodulin, putative	F:calcium ion binding;P:biological_process unknown;C:unknown;MOFPBV	O.I.	C.G.	H.G.
66.1	99.8	74.3	At5g26110	832680	ATP binding / catalytic/ protein kinase	F:protein kinase activity, catalytic activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;BOMAFP	O.I.	C.G.	H.G.
65.4	99.8	57.6	At1g66800	842998	cinnamyl-alcohol dehydrogenase family / CAD family	similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase	O.I.	C.G.	H.G.
65.0	99.8	52.2	At1g72890	843620	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMO	O.I.	C.G.	H.G.
64.6	99.8	27.0	At5g43690	834389	sulfotransferase family protein	F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPOBF	O.I.	C.G.	H.G.
64.5	99.8	28.9	At3g23060	821880	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MOPFBV	O.I.	C.G.	H.G.
64.2	99.8	30.3	At2g37210	818298	-	Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.	O.I.	C.G.	H.G.
63.8	99.8	83.7	At1g49950	841418	DNA-binding protein, putative	Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.	O.I.	C.G.	H.G.

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GSM ID	GSM133957
Assay name	Fukuda_1-2_0B_Rep2_ATH1
GSE experiment	GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.

Microarray experiments to specifically-expressed genes

GSM ID GSM133957 Assay name Fukuda_1-2_0B_Rep2_ATH1 GSE experiment GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.

GSM ID GSM133957

Assay name Fukuda_1-2_0B_Rep2_ATH1

GSE experiment GSE5748: In vitro tracheary element transdifferentiation of Col-0 suspension cells.