Microarray experiments to specifically-expressed genes

GSM ID GSM133893
Assay name Schroeder_1-9_JS46-starve-48h_Rep1_ATH1
GSE experiment GSE5744: Response to potassium starvation in roots

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
157.999.9116.9At5g26130832682-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBO.I.C.G.H.G.
106.299.9167.3At5g38930833885germin-like protein, putativeF:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:cell wall;PFOO.I.C.G.H.G.
100.099.999.8At1g70880843425Bet v I allergen family proteinF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
99.299.926.3At2g24710817007ATGLR2.3member of Putative ligand-gated ion channel subunit familyO.I.C.G.H.G.
96.199.961.0At1g33840840280unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFO.I.C.G.H.G.
91.099.936.3At5g04730830351unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
90.999.9127.8At5g43520834372DC1 domain-containing proteinF:unknown;P:unknown;C:unknown;POMFO.I.C.G.H.G.
85.699.9250.5At4g07820826263pathogenesis-related protein, putativeF:molecular_function unknown;P:unknown;C:endomembrane system, extracellular region;PMFBOO.I.C.G.H.G.
76.699.947.4At5g49770835040leucine-rich repeat transmembrane protein kinase, putativeF:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
68.199.9131.1At3g03670821193peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plant-type cell wall;PFOBO.I.C.G.H.G.
64.899.871.7At1g31885840079transporterF:transporter activity;P:transport;C:integral to membrane, membrane;BPOMFAVO.I.C.G.H.G.
62.199.812.3At1g33900840287avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putativeF:GTP binding;P:response to bacterium;C:unknown;MPOBFVO.I.C.G.H.G.
61.699.833.8At2g26820817223ATPP2-A3 (Phloem protein 2-A3)F:carbohydrate binding;P:response to bacterium;C:unknown;MOBPFVAO.I.C.G.H.G.
61.299.869.1At5g59680836089leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
55.799.829.7At4g40070830170protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.H.G.
55.499.828.5At4g10550826647subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAMO.I.C.G.H.G.
53.399.8183.1At5g19890832111peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:nucleus, cytoplasm;PFOBO.I.C.G.H.G.
53.199.860.1At4g31875829317unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
48.999.826.3At2g14440815932leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
45.899.892.3At3g05950819765germin-like protein, putativeF:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFBOO.I.C.G.H.G.
45.499.817.3At2g28990817448leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
44.199.8126.5At1g13300837890myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POVBMFO.I.C.G.H.G.
44.199.8108.4At2g44380819045DC1 domain-containing proteinF:unknown;P:unknown;C:unknown;PMOO.I.C.G.H.G.
43.399.878.9At1g11540837697unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAPO.I.C.G.H.G.
43.399.819.6At3g18450821374unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOO.I.C.G.H.G.
39.599.821.0At5g50140835079ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
37.899.820.5At1g49030841326unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOO.I.C.G.H.G.
35.599.7173.0At5g48430834898aspartic-type endopeptidaseF:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PO.I.C.G.H.G.
34.499.741.9At5g06570830545hydrolaseF:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
33.199.724.2At1g13670837928unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
32.799.7158.7At4g14630827113GLP9 (GERMIN-LIKE PROTEIN 9)germin-like protein with N-terminal signal sequence that may target it to the vacuole, plasma membrane and/or outside the cell.O.I.C.G.H.G.
31.499.737.0At5g54040835487DC1 domain-containing proteinF:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOFO.I.C.G.H.G.
31.499.723.7At3g60270825198uclacyanin, putativeF:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;POBVFMAO.I.C.G.H.G.
30.999.7288.5At2g05440815093glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVAO.I.C.G.H.G.
30.799.7320.8At1g49860841409ATGSTF14Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
30.499.725.0At5g24230832490-F:unknown;P:unknown;C:cellular_component unknown;PFMO.I.C.G.H.G.
30.399.715.4At2g34180817979CIPK13 (CBL-INTERACTING PROTEIN KINASE 13)Encodes CBL-interacting protein kinase 13 (CIPK13).O.I.C.G.H.G.
28.699.733.5At2g25680817109MOT1 (molybdate transporter 1)Encodes a high-affinity molybdate transporter. Mutant has reduced concentrations of molybdate in roots and shoots, and reduced shoot and root length when growing on Mo-limited medium.O.I.C.G.H.G.
28.099.717.0At5g05400830422disease resistance protein (CC-NBS-LRR class), putativeF:protein binding, ATP binding;P:N-terminal protein myristoylation, defense response, apoptosis;C:chloroplast;PMBOFAO.I.C.G.H.G.
26.499.739.5At5g37450833722leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
26.199.750.4At2g23030816833SNRK2.9 (SNF1-RELATED PROTEIN KINASE 2.9)encodes a member of SNF1-related protein kinases (SnRK2)O.I.C.G.H.G.
25.899.783.5At3g21510821705AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1)Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).O.I.C.G.H.G.
25.599.735.4At5g14650831317polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAO.I.C.G.H.G.
25.199.6129.9At5g67400836876peroxidase 73 (PER73) (P73) (PRXR11)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOO.I.C.G.H.G.
25.199.639.3At2g42350818836zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.H.G.
24.899.670.4At1g72360843568ethylene-responsive element-binding protein, putativeencodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.O.I.C.G.H.G.
24.599.6256.8At2g21045816639-F:unknown;P:aging;C:unknown;BOPAFMO.I.C.G.H.G.
24.399.638.6At4g08380826395proline-rich extensin-like family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFOBVAO.I.C.G.H.G.
23.599.641.7At3g49860824148ATARLA1B (ADP-ribosylation factor-like A1B)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.O.I.C.G.H.G.
23.499.6206.0At1g05240839237peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plant-type cell wall;PFOBO.I.C.G.H.G.
23.099.6250.9At3g01190821314peroxidase 27 (PER27) (P27) (PRXR7)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
23.099.645.8At5g07080830599transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOO.I.C.G.H.G.
22.699.612.3At1g73270843661scpl6 (serine carboxypeptidase-like 6)F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBOO.I.C.G.H.G.
22.299.623.6At3g51350824298aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to membrane;PMFOBAVO.I.C.G.H.G.
22.099.669.4At4g10380826630NIP5Essential for efficient Boron uptake and plant development under boron limitation. Also functions in arsenite transport and tolerance.O.I.C.G.H.G.
21.999.6159.0At4g26010828707peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOO.I.C.G.H.G.
21.399.648.4At1g30110839890ATNUDX25 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 25)F:bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity;P:diadenosine tetraphosphate catabolic process;C:cellular_component unknown;BOPMAO.I.C.G.H.G.
21.299.610.3At1g63550842660-F:unknown;P:unknown;C:anchored to membrane;POVMBFAO.I.C.G.H.G.
20.899.69.5At4g26560828763CBL7 (CALCINEURIN B-LIKE 7)Encodes calcineurin B-like protein 7 (CBL7).O.I.C.G.H.G.
20.799.610.7At1g53940841833GLIP2Encodes a lipase, has in vitro lipase activity with p-nitrophenyl acetate and p-nitrophenyl butyrate, gene expression induced by hormones, negatively regulates auxin signaling, involved in disease resistanceO.I.C.G.H.G.
20.399.6196.7At1g26250839166proline-rich extensin, putativeF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVAO.I.C.G.H.G.
20.299.6192.4At4g39675830122unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
20.299.623.1At5g06800830570myb family transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;POFMO.I.C.G.H.G.
19.999.610.6At4g28410828958aminotransferase-relatedF:1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity;P:cellular amino acid and derivative metabolic process, biosynthetic process;C:cellular_component unknown;BOPMAFO.I.C.G.H.G.
19.999.66.5At1g07680837281unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
19.899.67.6At1g63560842661-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
19.599.625.3At1g07560837270leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
19.499.6218.3At5g43350834353PHT1Encodes an inorganic phosphate transporter. Mutants display enhanced arsenic accumulation.O.I.C.G.H.G.
19.299.625.8At5g45080834539AtPP2-A6 (Phloem protein 2-A6)F:carbohydrate binding;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PO.I.C.G.H.G.
19.199.667.3At5g43180834336unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOO.I.C.G.H.G.
18.899.521.7At5g26010832670catalytic/ protein serine/threonine phosphataseF:protein serine/threonine phosphatase activity, catalytic activity;P:N-terminal protein myristoylation;C:cellular_component unknown;PMOFBVO.I.C.G.H.G.
18.899.55.2At5g54700835559ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOBFO.I.C.G.H.G.
18.799.5169.8At5g26280832697meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PFOMO.I.C.G.H.G.
18.799.544.7At3g01260821171aldose 1-epimerase/ carbohydrate binding / catalytic/ isomeraseF:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;OBMFPVAO.I.C.G.H.G.
18.699.510.8At1g68940843228armadillo/beta-catenin repeat protein-related / U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;POMBFVO.I.C.G.H.G.
18.599.59.2At5g19040832023IPT5Encodes cytokinin synthase.O.I.C.G.H.G.
18.499.519.2At2g28270817373DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
18.399.5103.7At2g39530818538integral membrane protein, putativeF:molecular_function unknown;P:biological_process unknown;C:membrane;PO.I.C.G.H.G.
18.199.532.1At2g361203768574DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1)Encodes a glycine rich protein that is involved in leaf vascular patterning. dot1 mutants have an aberrant open-class venation pattern in leaves and cotyledons, as well as several other leaf development defects.O.I.C.G.H.G.
18.099.536.3At4g35380829691guanine nucleotide exchange family proteinF:binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:intracellular;MFOPBAO.I.C.G.H.G.
17.799.521.1At4g15400827208transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:unknown;C:cellular_component unknown;PFBO.I.C.G.H.G.
17.699.510.6At3g60550825226CYCP3F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:unknown;FOMPBO.I.C.G.H.G.
17.399.510.1At2g28970817446leucine-rich repeat protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVAO.I.C.G.H.G.
17.399.56.2At5g52350835311ATEXO70A3 (exocyst subunit EXO70 family protein A3)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.O.I.C.G.H.G.
17.299.536.5At4g25790828684allergen V5/Tpx-1-related family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBVAO.I.C.G.H.G.
17.199.596.7At3g23430821924PHO1 (phosphate 1)mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains.O.I.C.G.H.G.
17.199.513.8At1g21210838716WAK4 (wall associated kinase 4)cell wall-associated ser/thr kinase involved in cell elongation and lateral root developmentO.I.C.G.H.G.
16.999.513.3At1g50050841429pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFBOO.I.C.G.H.G.
16.899.519.3At2g28960817445leucine-rich repeat protein kinase, putativeF:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
16.899.512.5At4g16350827330CBL6 (CALCINEURIN B-LIKE PROTEIN 6)Calcium sensor protein. Binds CIPK14.O.I.C.G.H.G.
16.799.588.2At4g20110827757vacuolar sorting receptor, putativeF:calcium ion binding;P:intracellular protein transport, N-terminal protein myristoylation, protein targeting to vacuole;C:trans-Golgi network, integral to plasma membrane, Golgi transport complex, membrane;MOPBFAO.I.C.G.H.G.
16.799.562.6At1g49570841381peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBO.I.C.G.H.G.
16.799.56.8At1g33890840286avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putativeF:GTP binding;P:response to bacterium;C:cellular_component unknown;MPOBFO.I.C.G.H.G.
16.399.5243.1At3g54040824571photoassimilate-responsive protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
16.399.5193.9At1g19530838540unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PO.I.C.G.H.G.
16.399.513.3At2g39410818526hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:unknown;BPOMVAO.I.C.G.H.G.
16.399.58.4At2g37820818359DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PMOFO.I.C.G.H.G.
16.299.557.7At5g40510834049-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FBPOAO.I.C.G.H.G.
16.299.529.4At1g30840839967ATPUP4Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.O.I.C.G.H.G.
16.199.585.0At5g44610834489MAP18 (Microtubule-associated Protein 18)Encodes a protein of unknown function with seven repeated VEEKK motifs. RNAi and overexpression experiments suggest that the gene is not involved in cell division but might be consequential for cell shape of epidermal and cortical cells. The protein encoded by this gene binds to cortical microtubules and inhibits tubulin polymerization.O.I.C.G.H.G.



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