CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133817

Assay name Yang_1-2_old-pod_Rep1_ATH1

GSE experiment GSE5736: To identify changes in gene expression during silique senescence in Arabidopsis thaliana

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
428.1 100.0 579.8 At1g47540 841163 trypsin inhibitor, putative F:ion channel inhibitor activity;P:defense response;C:endomembrane system, extracellular region;PO O.I. C.G. H.G.
357.9 100.0 1193.8 At4g27170 828825 2S seed storage protein 4 / 2S albumin storage protein / NWMU2-2S albumin 4 F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PO O.I. C.G. H.G.
287.2 100.0 854.0 At4g27160 828824 AT2S3 F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PO O.I. C.G. H.G.
274.7 100.0 1208.9 At1g03880 839383 CRU2 (CRUCIFERIN 2) Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. O.I. C.G. H.G.
251.5 100.0 93.6 At3g57510 824918 ADPG1 Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding. O.I. C.G. H.G.
242.0 100.0 828.7 At4g27140 828822 2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1 F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PMO O.I. C.G. H.G.
225.7 100.0 1043.2 At5g44120 834435 CRA1 (CRUCIFERINA) Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. O.I. C.G. H.G.
194.5 100.0 1063.2 At4g28520 828970 CRU3 (CRUCIFERIN 3) Encodes a 12S seed storage protein that is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. O.I. C.G. H.G.
191.8 100.0 524.4 At4g27150 828823 2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2 F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PO O.I. C.G. H.G.
175.8 100.0 76.1 At5g57520 835856 ZFP2 (ZINC FINGER PROTEIN 2) Encodes a zinc finger protein containing only a single zinc finger. O.I. C.G. H.G.
170.3 100.0 644.6 At1g62000 842495 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOF O.I. C.G. H.G.
160.1 99.9 323.0 At3g63040 825479 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
151.7 99.9 416.6 At1g03890 839379 cupin family protein F:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;PBMO O.I. C.G. H.G.
133.4 99.9 537.8 At3g27660 822388 OLEO4 (OLEOSIN 4) Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798. O.I. C.G. H.G.
121.9 99.9 580.7 At4g25140 828617 OLEO1 (OLEOSIN 1) Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds. O.I. C.G. H.G.
119.4 99.9 90.2 At3g02875 821199 ILR1 (IAA-LEUCINE RESISTANT 1) Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors. O.I. C.G. H.G.
118.2 99.9 38.7 At3g14630 820691 CYP72A9 putative cytochrome P450 O.I. C.G. H.G.
110.3 99.9 446.4 At2g27380 817282 ATEPR1 Encodes an extensin like gene involved in seed germination. O.I. C.G. H.G.
105.8 99.9 474.1 At3g01570 821106 glycine-rich protein / oleosin F:molecular_function unknown;P:lipid storage;C:monolayer-surrounded lipid storage body, integral to membrane, membrane;P O.I. C.G. H.G.
104.5 99.9 520.6 At5g40420 834040 OLEO2 (OLEOSIN 2) Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds. O.I. C.G. H.G.
103.0 99.9 609.7 At5g54740 835563 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding, nutrient reservoir activity;P:lipid transport, pollen development;C:endomembrane system;PO O.I. C.G. H.G.
102.9 99.9 75.5 At3g15510 820790 ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2) Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2. O.I. C.G. H.G.
101.0 99.9 77.2 At3g60730 825244 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFM O.I. C.G. H.G.
91.8 99.9 419.1 At2g28490 817397 cupin family protein F:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;BMPOFVA O.I. C.G. H.G.
73.5 99.9 148.9 At3g19550 821491 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
66.0 99.8 310.7 At1g14950 838060 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
61.0 99.8 17.7 At3g44460 823571 DPBF2 basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons. O.I. C.G. H.G.
57.5 99.8 112.2 At1g35230 840412 AGP5 (ARABINOGALACTAN-PROTEIN 5) Encodes arabinogalactan-protein (AGP5). O.I. C.G. H.G.
57.3 99.8 55.0 At1g61810 842478 BGLU45 (BETA-GLUCOSIDASE 45) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA O.I. C.G. H.G.
56.5 99.8 236.0 At5g07190 830610 ATS3 (ARABIDOPSIS THALIANA SEED GENE 3) Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function. O.I. C.G. H.G.
53.0 99.8 53.8 At3g25010 822092 AtRLP41 (Receptor Like Protein 41) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
52.2 99.8 182.2 At4g26740 828781 ATS1 (ARABIDOPSIS THALIANA SEED GENE 1) Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27. O.I. C.G. H.G.
51.3 99.8 309.9 At5g59170 836035 proline-rich family protein F:unknown;P:unknown;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
50.7 99.8 78.3 At1g65480 842859 FT (FLOWERING LOCUS T) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1. O.I. C.G. H.G.
50.4 99.8 362.6 At1g04560 839491 AWPM-19-like membrane family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
49.7 99.8 185.2 At4g36700 829823 cupin family protein F:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;MOFBPVA O.I. C.G. H.G.
48.9 99.8 166.0 At2g19570 816476 CDA1 (CYTIDINE DEAMINASE 1) Encodes a cytidine deaminase that deaminates cytidine and deoxycytidine and is competitively inhibited by cytosine-containing compounds. O.I. C.G. H.G.
47.5 99.8 45.9 At4g13900 3770199 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
44.8 99.8 228.6 At1g62290 842526 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis, lipid metabolic process;C:vacuole;MFOPB O.I. C.G. H.G.
36.5 99.7 144.0 At2g15010 815990 thionin, putative Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. O.I. C.G. H.G.
36.5 99.7 75.1 At4g34520 829603 KCS18 Encodes KCS18, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
36.1 99.7 286.6 At3g22640 821835 PAP85 F:nutrient reservoir activity;P:biological_process unknown;C:plant-type cell wall;POM O.I. C.G. H.G.
36.0 99.7 560.0 At1g75040 843842 PR5 (PATHOGENESIS-RELATED GENE 5) Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment. O.I. C.G. H.G.
33.2 99.7 139.4 At1g17990 838379 12-oxophytodienoate reductase, putative F:unknown;P:unknown;C:unknown;BOFPAM O.I. C.G. H.G.
32.6 99.7 220.1 At1g48130 841231 ATPER1 encodes a protein similar to the 1-cysteine (1-Cys) peroxiredoxin family of antioxidants. Expression is limited to seed (aleurone and embryo) and is not induced by ABA or drought. O.I. C.G. H.G.
30.3 99.7 50.8 At3g61880 825361 CYP78A9 (CYTOCHROME P450 78A9) Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis. O.I. C.G. H.G.
29.4 99.7 208.5 At2g02120 814743 PDF2.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. O.I. C.G. H.G.
29.4 99.7 48.7 At4g23990 828499 ATCSLG3 encodes a protein similar to cellulose synthase O.I. C.G. H.G.
28.7 99.7 175.5 At3g62730 825448 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PB O.I. C.G. H.G.
28.0 99.7 34.9 At5g09640 830823 SCPL19 encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase. O.I. C.G. H.G.
27.4 99.7 75.3 At1g52880 841721 NAM (NO APICAL MERISTEM) Transcription factor with a NAC domain. Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo. O.I. C.G. H.G.
26.7 99.7 166.0 At1g54860 841925 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
26.6 99.7 49.9 At1g11170 837658 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB O.I. C.G. H.G.
26.2 99.7 11.5 At1g52810 841714 2-oxoglutarate-dependent dioxygenase-related F:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFM O.I. C.G. H.G.
26.0 99.7 87.4 At2g47800 819392 ATMRP4 (ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 4) Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim. O.I. C.G. H.G.
25.6 99.7 417.1 At3g57260 824893 BGL2 (BETA-1,3-GLUCANASE 2) beta 1,3-glucanase O.I. C.G. H.G.
25.6 99.7 165.4 At1g05510 837053 - Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. O.I. C.G. H.G.
25.5 99.7 35.8 At5g50770 835149 AtHSD6 (hydroxysteroid dehydrogenase 6) F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAV O.I. C.G. H.G.
25.0 99.6 171.8 At5g51210 835196 OLEO3 (OLEOSIN3) Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation. O.I. C.G. H.G.
23.3 99.6 72.8 At1g32940 840188 SBT3.5 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFM O.I. C.G. H.G.
23.0 99.6 41.5 At3g12203 820399 scpl17 (serine carboxypeptidase-like 17) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
22.9 99.6 39.3 At3g60160 825186 ATMRP9 member of MRP subfamily O.I. C.G. H.G.
22.8 99.6 72.4 At5g49190 834978 SUS2 (SUCROSE SYNTHASE 2) Encodes a putative sucrose synthase (SUS2). The activity of the enzyme could not be assayed as proved to be insoluble (PMID 17257168). Induced specifically by O(2) deficiency. O.I. C.G. H.G.
22.7 99.6 16.5 At5g39090 833901 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFO O.I. C.G. H.G.
22.5 99.6 131.3 At3g03470 821250 CYP89A9 member of CYP89A O.I. C.G. H.G.
22.3 99.6 129.5 At2g34700 818035 pollen Ole e 1 allergen and extensin family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
22.3 99.6 44.1 At3g17130 820970 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:unknown;C:endomembrane system;P O.I. C.G. H.G.
21.9 99.6 50.8 At3g04170 819572 germin-like protein, putative F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFBO O.I. C.G. H.G.
21.6 99.6 99.5 At3g02310 821151 SEP2 (SEPALLATA 2) MADS-box protein, binds K domain of AG in vivo O.I. C.G. H.G.
21.6 99.6 68.2 At2g37770 818354 aldo/keto reductase family protein F:oxidoreductase activity;P:oxidation reduction;C:unknown;BOMFPA O.I. C.G. H.G.
21.0 99.6 171.6 At5g50600 835129 AtHSD1 (hydroxysteroid dehydrogenase 1) F:oxidoreductase activity, binding, catalytic activity;P:response to brassinosteroid stimulus, response to abscisic acid stimulus;C:endomembrane system;BOMFPAV O.I. C.G. H.G.
20.9 99.6 32.0 At1g20380 838626 prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative F:serine-type peptidase activity, serine-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;OBMPAF O.I. C.G. H.G.
20.3 99.6 101.7 At1g76960 844031 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
19.5 99.6 180.2 At1g73190 843653 TIP3 Moves to the Protein Storage Vacuole in a Golgi independent manner O.I. C.G. H.G.
19.4 99.6 17.7 At1g78500 844186 pentacyclic triterpene synthase, putative Encodes a protein with pentacyclic triterpene synthase activity. In addition to the compounds lupeol, α-amyrin and bauerenol, this enzyme was also shown to produce two seco-triterpenes: α- and β-seco-amyrin. O.I. C.G. H.G.
19.4 99.6 9.6 At2g47120 819325 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
19.2 99.6 60.6 At5g60910 836212 AGL8 (agamous-like 8) MADS box gene negatively regulated by APETALA1 O.I. C.G. H.G.
18.8 99.5 570.6 At2g14610 815949 PR1 (PATHOGENESIS-RELATED GENE 1) PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive. O.I. C.G. H.G.
18.8 99.5 44.2 At3g20100 821553 CYP705A19 member of CYP705A O.I. C.G. H.G.
18.7 99.5 445.7 At2g25450 817083 2-oxoglutarate-dependent dioxygenase, putative encodes a protein whose sequence is similar to ACC oxidase O.I. C.G. H.G.
18.6 99.5 16.7 At4g04220 825737 AtRLP46 (Receptor Like Protein 46) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
18.5 99.5 246.1 At1g62510 842548 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;OBPMVFA O.I. C.G. H.G.
18.0 99.5 97.1 At3g21710 821725 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
18.0 99.5 83.8 At2g29350 817484 SAG13 senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenase O.I. C.G. H.G.
18.0 99.5 53.2 At4g28085 828924 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
17.9 99.5 69.2 At4g31830 829312 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
17.9 99.5 12.9 At4g16740 827377 ATTPS03 Monoterpene synthase, catalyzes the formation of the acyclic monoterpene (E)-beta-ocimene in response to wounding or treatment with jasmonic acid. O.I. C.G. H.G.
17.8 99.5 60.1 At4g09600 826545 GASA3 (GAST1 PROTEIN HOMOLOG 3) One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato. O.I. C.G. H.G.
17.7 99.5 24.1 At4g02360 827767 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
17.6 99.5 41.8 At5g13550 831199 SULTR4 Encodes a sulfate transporter. O.I. C.G. H.G.
17.6 99.5 12.7 At3g25020 822093 AtRLP42 (Receptor Like Protein 42) F:protein binding;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
17.5 99.5 219.4 At2g33380 817901 RD20 (RESPONSIVE TO DESSICATION 20) Encodes a calcium binding protein whose mRNA is induced upon treatment with NaCl, ABA and in response to dessication. mRNA expression under drought conditions is apparent particularly in leaves and flowers. O.I. C.G. H.G.
17.4 99.5 116.8 At1g17810 838359 BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN) beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete O.I. C.G. H.G.
17.1 99.5 10.0 At1g65880 842900 BZO1 (BENZOYLOXYGLUCOSINOLATE 1) Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds. O.I. C.G. H.G.
16.9 99.5 458.8 At4g32940 829431 GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death. O.I. C.G. H.G.
16.9 99.5 99.2 At4g23140 828413 CRK6 (CYSTEINE-RICH RLK 6) Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) O.I. C.G. H.G.
16.8 99.5 114.5 At3g51860 824349 CAX3 (CATION EXCHANGER 3) F:cation:cation antiporter activity, calcium:cation antiporter activity, calcium:hydrogen antiporter activity;P:in 9 processes;C:plant-type vacuole membrane, vacuolar membrane, vacuole;BFOPAM O.I. C.G. H.G.
16.8 99.5 44.2 At4g25000 828603 AMY1 (ALPHA-AMYLASE-LIKE) Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830). O.I. C.G. H.G.
16.7 99.5 105.4 At5g45690 834608 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPF O.I. C.G. H.G.
16.3 99.5 86.6 At2g43520 818953 ATTI2 Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
428.1	100.0	579.8	At1g47540	841163	trypsin inhibitor, putative	F:ion channel inhibitor activity;P:defense response;C:endomembrane system, extracellular region;PO	O.I.	C.G.	H.G.
357.9	100.0	1193.8	At4g27170	828825	2S seed storage protein 4 / 2S albumin storage protein / NWMU2-2S albumin 4	F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PO	O.I.	C.G.	H.G.
287.2	100.0	854.0	At4g27160	828824	AT2S3	F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PO	O.I.	C.G.	H.G.
274.7	100.0	1208.9	At1g03880	839383	CRU2 (CRUCIFERIN 2)	Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.	O.I.	C.G.	H.G.
251.5	100.0	93.6	At3g57510	824918	ADPG1	Encodes ADPG1, a polygalacturonase protein involved in silique and anther dihiscence. Loss of function mutations have reduced seed set, indehiscent fruit and reduced pollen shedding.	O.I.	C.G.	H.G.
242.0	100.0	828.7	At4g27140	828822	2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1	F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PMO	O.I.	C.G.	H.G.
225.7	100.0	1043.2	At5g44120	834435	CRA1 (CRUCIFERINA)	Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.	O.I.	C.G.	H.G.
194.5	100.0	1063.2	At4g28520	828970	CRU3 (CRUCIFERIN 3)	Encodes a 12S seed storage protein that is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.	O.I.	C.G.	H.G.
191.8	100.0	524.4	At4g27150	828823	2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2	F:lipid binding, nutrient reservoir activity;P:lipid transport;C:endomembrane system;PO	O.I.	C.G.	H.G.
175.8	100.0	76.1	At5g57520	835856	ZFP2 (ZINC FINGER PROTEIN 2)	Encodes a zinc finger protein containing only a single zinc finger.	O.I.	C.G.	H.G.
170.3	100.0	644.6	At1g62000	842495	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPOF	O.I.	C.G.	H.G.
160.1	99.9	323.0	At3g63040	825479	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
151.7	99.9	416.6	At1g03890	839379	cupin family protein	F:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;PBMO	O.I.	C.G.	H.G.
133.4	99.9	537.8	At3g27660	822388	OLEO4 (OLEOSIN 4)	Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798.	O.I.	C.G.	H.G.
121.9	99.9	580.7	At4g25140	828617	OLEO1 (OLEOSIN 1)	Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.	O.I.	C.G.	H.G.
119.4	99.9	90.2	At3g02875	821199	ILR1 (IAA-LEUCINE RESISTANT 1)	Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.	O.I.	C.G.	H.G.
118.2	99.9	38.7	At3g14630	820691	CYP72A9	putative cytochrome P450	O.I.	C.G.	H.G.
110.3	99.9	446.4	At2g27380	817282	ATEPR1	Encodes an extensin like gene involved in seed germination.	O.I.	C.G.	H.G.
105.8	99.9	474.1	At3g01570	821106	glycine-rich protein / oleosin	F:molecular_function unknown;P:lipid storage;C:monolayer-surrounded lipid storage body, integral to membrane, membrane;P	O.I.	C.G.	H.G.
104.5	99.9	520.6	At5g40420	834040	OLEO2 (OLEOSIN 2)	Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.	O.I.	C.G.	H.G.
103.0	99.9	609.7	At5g54740	835563	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding, nutrient reservoir activity;P:lipid transport, pollen development;C:endomembrane system;PO	O.I.	C.G.	H.G.
102.9	99.9	75.5	At3g15510	820790	ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2)	Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.	O.I.	C.G.	H.G.
101.0	99.9	77.2	At3g60730	825244	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFM	O.I.	C.G.	H.G.
91.8	99.9	419.1	At2g28490	817397	cupin family protein	F:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;BMPOFVA	O.I.	C.G.	H.G.
73.5	99.9	148.9	At3g19550	821491	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
66.0	99.8	310.7	At1g14950	838060	major latex protein-related / MLP-related	F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
61.0	99.8	17.7	At3g44460	823571	DPBF2	basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons.	O.I.	C.G.	H.G.
57.5	99.8	112.2	At1g35230	840412	AGP5 (ARABINOGALACTAN-PROTEIN 5)	Encodes arabinogalactan-protein (AGP5).	O.I.	C.G.	H.G.
57.3	99.8	55.0	At1g61810	842478	BGLU45 (BETA-GLUCOSIDASE 45)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA	O.I.	C.G.	H.G.
56.5	99.8	236.0	At5g07190	830610	ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)	Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function.	O.I.	C.G.	H.G.
53.0	99.8	53.8	At3g25010	822092	AtRLP41 (Receptor Like Protein 41)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
52.2	99.8	182.2	At4g26740	828781	ATS1 (ARABIDOPSIS THALIANA SEED GENE 1)	Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27.	O.I.	C.G.	H.G.
51.3	99.8	309.9	At5g59170	836035	proline-rich family protein	F:unknown;P:unknown;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
50.7	99.8	78.3	At1g65480	842859	FT (FLOWERING LOCUS T)	FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.	O.I.	C.G.	H.G.
50.4	99.8	362.6	At1g04560	839491	AWPM-19-like membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
49.7	99.8	185.2	At4g36700	829823	cupin family protein	F:nutrient reservoir activity;P:biological_process unknown;C:endomembrane system;MOFBPVA	O.I.	C.G.	H.G.
48.9	99.8	166.0	At2g19570	816476	CDA1 (CYTIDINE DEAMINASE 1)	Encodes a cytidine deaminase that deaminates cytidine and deoxycytidine and is competitively inhibited by cytosine-containing compounds.	O.I.	C.G.	H.G.
47.5	99.8	45.9	At4g13900	3770199	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
44.8	99.8	228.6	At1g62290	842526	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis, lipid metabolic process;C:vacuole;MFOPB	O.I.	C.G.	H.G.
36.5	99.7	144.0	At2g15010	815990	thionin, putative	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.	O.I.	C.G.	H.G.
36.5	99.7	75.1	At4g34520	829603	KCS18	Encodes KCS18, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
36.1	99.7	286.6	At3g22640	821835	PAP85	F:nutrient reservoir activity;P:biological_process unknown;C:plant-type cell wall;POM	O.I.	C.G.	H.G.
36.0	99.7	560.0	At1g75040	843842	PR5 (PATHOGENESIS-RELATED GENE 5)	Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.	O.I.	C.G.	H.G.
33.2	99.7	139.4	At1g17990	838379	12-oxophytodienoate reductase, putative	F:unknown;P:unknown;C:unknown;BOFPAM	O.I.	C.G.	H.G.
32.6	99.7	220.1	At1g48130	841231	ATPER1	encodes a protein similar to the 1-cysteine (1-Cys) peroxiredoxin family of antioxidants. Expression is limited to seed (aleurone and embryo) and is not induced by ABA or drought.	O.I.	C.G.	H.G.
30.3	99.7	50.8	At3g61880	825361	CYP78A9 (CYTOCHROME P450 78A9)	Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.	O.I.	C.G.	H.G.
29.4	99.7	208.5	At2g02120	814743	PDF2.1	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.	O.I.	C.G.	H.G.
29.4	99.7	48.7	At4g23990	828499	ATCSLG3	encodes a protein similar to cellulose synthase	O.I.	C.G.	H.G.
28.7	99.7	175.5	At3g62730	825448	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PB	O.I.	C.G.	H.G.
28.0	99.7	34.9	At5g09640	830823	SCPL19	encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase.	O.I.	C.G.	H.G.
27.4	99.7	75.3	At1g52880	841721	NAM (NO APICAL MERISTEM)	Transcription factor with a NAC domain. Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo.	O.I.	C.G.	H.G.
26.7	99.7	166.0	At1g54860	841925	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
26.6	99.7	49.9	At1g11170	837658	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB	O.I.	C.G.	H.G.
26.2	99.7	11.5	At1g52810	841714	2-oxoglutarate-dependent dioxygenase-related	F:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
26.0	99.7	87.4	At2g47800	819392	ATMRP4 (ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 4)	Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim.	O.I.	C.G.	H.G.
25.6	99.7	417.1	At3g57260	824893	BGL2 (BETA-1,3-GLUCANASE 2)	beta 1,3-glucanase	O.I.	C.G.	H.G.
25.6	99.7	165.4	At1g05510	837053	-	Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.	O.I.	C.G.	H.G.
25.5	99.7	35.8	At5g50770	835149	AtHSD6 (hydroxysteroid dehydrogenase 6)	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAV	O.I.	C.G.	H.G.
25.0	99.6	171.8	At5g51210	835196	OLEO3 (OLEOSIN3)	Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation.	O.I.	C.G.	H.G.
23.3	99.6	72.8	At1g32940	840188	SBT3.5	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFM	O.I.	C.G.	H.G.
23.0	99.6	41.5	At3g12203	820399	scpl17 (serine carboxypeptidase-like 17)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
22.9	99.6	39.3	At3g60160	825186	ATMRP9	member of MRP subfamily	O.I.	C.G.	H.G.
22.8	99.6	72.4	At5g49190	834978	SUS2 (SUCROSE SYNTHASE 2)	Encodes a putative sucrose synthase (SUS2). The activity of the enzyme could not be assayed as proved to be insoluble (PMID 17257168). Induced specifically by O(2) deficiency.	O.I.	C.G.	H.G.
22.7	99.6	16.5	At5g39090	833901	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFO	O.I.	C.G.	H.G.
22.5	99.6	131.3	At3g03470	821250	CYP89A9	member of CYP89A	O.I.	C.G.	H.G.
22.3	99.6	129.5	At2g34700	818035	pollen Ole e 1 allergen and extensin family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
22.3	99.6	44.1	At3g17130	820970	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
21.9	99.6	50.8	At3g04170	819572	germin-like protein, putative	F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PFBO	O.I.	C.G.	H.G.
21.6	99.6	99.5	At3g02310	821151	SEP2 (SEPALLATA 2)	MADS-box protein, binds K domain of AG in vivo	O.I.	C.G.	H.G.
21.6	99.6	68.2	At2g37770	818354	aldo/keto reductase family protein	F:oxidoreductase activity;P:oxidation reduction;C:unknown;BOMFPA	O.I.	C.G.	H.G.
21.0	99.6	171.6	At5g50600	835129	AtHSD1 (hydroxysteroid dehydrogenase 1)	F:oxidoreductase activity, binding, catalytic activity;P:response to brassinosteroid stimulus, response to abscisic acid stimulus;C:endomembrane system;BOMFPAV	O.I.	C.G.	H.G.
20.9	99.6	32.0	At1g20380	838626	prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative	F:serine-type peptidase activity, serine-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;OBMPAF	O.I.	C.G.	H.G.
20.3	99.6	101.7	At1g76960	844031	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
19.5	99.6	180.2	At1g73190	843653	TIP3	Moves to the Protein Storage Vacuole in a Golgi independent manner	O.I.	C.G.	H.G.
19.4	99.6	17.7	At1g78500	844186	pentacyclic triterpene synthase, putative	Encodes a protein with pentacyclic triterpene synthase activity. In addition to the compounds lupeol, α-amyrin and bauerenol, this enzyme was also shown to produce two seco-triterpenes: α- and β-seco-amyrin.	O.I.	C.G.	H.G.
19.4	99.6	9.6	At2g47120	819325	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
19.2	99.6	60.6	At5g60910	836212	AGL8 (agamous-like 8)	MADS box gene negatively regulated by APETALA1	O.I.	C.G.	H.G.
18.8	99.5	570.6	At2g14610	815949	PR1 (PATHOGENESIS-RELATED GENE 1)	PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.	O.I.	C.G.	H.G.
18.8	99.5	44.2	At3g20100	821553	CYP705A19	member of CYP705A	O.I.	C.G.	H.G.
18.7	99.5	445.7	At2g25450	817083	2-oxoglutarate-dependent dioxygenase, putative	encodes a protein whose sequence is similar to ACC oxidase	O.I.	C.G.	H.G.
18.6	99.5	16.7	At4g04220	825737	AtRLP46 (Receptor Like Protein 46)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
18.5	99.5	246.1	At1g62510	842548	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;OBPMVFA	O.I.	C.G.	H.G.
18.0	99.5	97.1	At3g21710	821725	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
18.0	99.5	83.8	At2g29350	817484	SAG13	senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenase	O.I.	C.G.	H.G.
18.0	99.5	53.2	At4g28085	828924	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
17.9	99.5	69.2	At4g31830	829312	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
17.9	99.5	12.9	At4g16740	827377	ATTPS03	Monoterpene synthase, catalyzes the formation of the acyclic monoterpene (E)-beta-ocimene in response to wounding or treatment with jasmonic acid.	O.I.	C.G.	H.G.
17.8	99.5	60.1	At4g09600	826545	GASA3 (GAST1 PROTEIN HOMOLOG 3)	One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato.	O.I.	C.G.	H.G.
17.7	99.5	24.1	At4g02360	827767	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
17.6	99.5	41.8	At5g13550	831199	SULTR4	Encodes a sulfate transporter.	O.I.	C.G.	H.G.
17.6	99.5	12.7	At3g25020	822093	AtRLP42 (Receptor Like Protein 42)	F:protein binding;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
17.5	99.5	219.4	At2g33380	817901	RD20 (RESPONSIVE TO DESSICATION 20)	Encodes a calcium binding protein whose mRNA is induced upon treatment with NaCl, ABA and in response to dessication. mRNA expression under drought conditions is apparent particularly in leaves and flowers.	O.I.	C.G.	H.G.
17.4	99.5	116.8	At1g17810	838359	BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)	beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete	O.I.	C.G.	H.G.
17.1	99.5	10.0	At1g65880	842900	BZO1 (BENZOYLOXYGLUCOSINOLATE 1)	Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.	O.I.	C.G.	H.G.
16.9	99.5	458.8	At4g32940	829431	GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME)	Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.	O.I.	C.G.	H.G.
16.9	99.5	99.2	At4g23140	828413	CRK6 (CYSTEINE-RICH RLK 6)	Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)	O.I.	C.G.	H.G.
16.8	99.5	114.5	At3g51860	824349	CAX3 (CATION EXCHANGER 3)	F:cation:cation antiporter activity, calcium:cation antiporter activity, calcium:hydrogen antiporter activity;P:in 9 processes;C:plant-type vacuole membrane, vacuolar membrane, vacuole;BFOPAM	O.I.	C.G.	H.G.
16.8	99.5	44.2	At4g25000	828603	AMY1 (ALPHA-AMYLASE-LIKE)	Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830).	O.I.	C.G.	H.G.
16.7	99.5	105.4	At5g45690	834608	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPF	O.I.	C.G.	H.G.
16.3	99.5	86.6	At2g43520	818953	ATTI2	Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family.	O.I.	C.G.	H.G.

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GSM ID	GSM133817
Assay name	Yang_1-2_old-pod_Rep1_ATH1
GSE experiment	GSE5736: To identify changes in gene expression during silique senescence in Arabidopsis thaliana

Microarray experiments to specifically-expressed genes

GSM ID GSM133817 Assay name Yang_1-2_old-pod_Rep1_ATH1 GSE experiment GSE5736: To identify changes in gene expression during silique senescence in Arabidopsis thaliana

GSM ID GSM133817

Assay name Yang_1-2_old-pod_Rep1_ATH1

GSE experiment GSE5736: To identify changes in gene expression during silique senescence in Arabidopsis thaliana