CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133767

Assay name Lindsey_1-19_torpedo-basal_Rep4_ATH1

GSE experiment GSE5730: Transcriptional profiling of laser-capture micro-dissected embryonic tissues

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
754.8 100.0 148.6 At1g74420 843783 FUT3 (FUCOSYLTRANSFERASE 3) Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundantwith FUT1. O.I. C.G. H.G.
741.0 100.0 504.1 At1g63100 842613 scarecrow transcription factor family protein F:transcription factor activity;P:regulation of transcription;C:unknown;POMB O.I. C.G. H.G.
620.9 100.0 53.2 At4g15720 827250 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF O.I. C.G. H.G.
601.6 100.0 153.7 At5g50110 835075 - F:molecular_function unknown;P:cell cycle;C:cellular_component unknown;BOPM O.I. C.G. H.G.
362.7 100.0 129.6 At1g29270 839801 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
342.5 100.0 126.5 At5g09230 830782 SRT2 (SIRTUIN 2) Encodes SRT2, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230). O.I. C.G. H.G.
243.2 100.0 92.0 At1g15150 838080 MATE efflux family protein F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
221.0 100.0 275.6 At1g71691 843496 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:unknown;PBFOM O.I. C.G. H.G.
214.2 100.0 147.7 At1g12330 837787 unknown protein F:unknown;P:biological_process unknown;C:chloroplast;PFOM O.I. C.G. H.G.
173.5 100.0 41.5 At4g01930 828198 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMO O.I. C.G. H.G.
167.6 100.0 362.8 At1g47540 841163 trypsin inhibitor, putative F:ion channel inhibitor activity;P:defense response;C:endomembrane system, extracellular region;PO O.I. C.G. H.G.
160.5 99.9 73.2 At4g29240 829045 leucine-rich repeat family protein / extensin family protein F:protein binding;P:biological_process unknown;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
140.5 99.9 263.6 At3g07030 3768790 nucleic acid binding F:nucleic acid binding;P:unknown;C:unknown O.I. C.G. H.G.
138.7 99.9 102.2 At5g08460 830745 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
133.0 99.9 46.9 At5g03800 831717 EMB175 (EMBRYO DEFECTIVE 175) Encodes a protein with a large central domain of 14 internal pentatricopeptide motifs (some degenerate) arranged in tandem. Mutations in this locus result in embryo lethality. O.I. C.G. H.G.
129.1 99.9 133.6 At1g13740 837934 AFP2 (ABI FIVE BINDING PROTEIN 2) Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent. O.I. C.G. H.G.
123.4 99.9 179.0 At1g72340 843566 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein F:GTP binding, translation initiation factor activity;P:translational initiation, cellular metabolic process;C:eukaryotic translation initiation factor 2B complex;OBMFAP O.I. C.G. H.G.
120.1 99.9 297.5 At4g08350 826391 GTA2 (GLOBAL TRANSCRIPTION FACTOR GROUP A2) F:transcription elongation regulator activity, structural constituent of ribosome, transcription factor activity;P:translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter;C:ribosome, intracellular;MOFPBVA O.I. C.G. H.G.
114.6 99.9 78.6 At5g05480 830431 unknown protein F:molecular_function unknown;P:biological_process unknown;C:vacuole;FPABO O.I. C.G. H.G.
113.1 99.9 44.6 At3g53450 824513 unknown protein F:molecular_function unknown;P:lysine biosynthetic process via diaminopimelate;C:cellular_component unknown;BOPFMA O.I. C.G. H.G.
112.5 99.9 68.2 At3g58530 825022 F-box family protein-related F:unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBV O.I. C.G. H.G.
111.3 99.9 72.1 At1g04020 839329 BARD1 (BREAST CANCER ASSOCIATED RING 1) Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent protein�protein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression. O.I. C.G. H.G.
110.2 99.9 201.9 At5g55920 835690 nucleolar protein, putative F:S-adenosylmethionine-dependent methyltransferase activity, RNA binding;P:rRNA processing;C:nucleolus;BMOFPVA O.I. C.G. H.G.
107.7 99.9 35.3 At3g24340 822023 chr40 (chromatin remodeling 40) F:helicase activity, DNA binding, ATP binding, nucleic acid binding;P:unknown;C:unknown;BMOFPVA O.I. C.G. H.G.
107.6 99.9 35.4 At4g32450 829380 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:mitochondrion;POFM O.I. C.G. H.G.
95.1 99.9 29.3 At2g23510 816883 SDT (SPERMIDINE DISINAPOYL ACYLTRANSFERASE) F:spermidine:sinapoyl CoA N-acyltransferase activity, sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO O.I. C.G. H.G.
94.1 99.9 39.8 At1g04150 839249 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBV O.I. C.G. H.G.
93.1 99.9 180.6 At1g21570 838758 zinc finger (CCCH-type) family protein F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:unknown;MFPO O.I. C.G. H.G.
90.5 99.9 48.6 At3g26750 822288 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
90.2 99.9 52.4 At3g58540 825023 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
88.9 99.9 29.9 At3g22900 821862 NRPD7 Non-catalytic subunit specific to DNA-directed RNA polymerase IV; homologous to budding yeast RPB7 O.I. C.G. H.G.
88.7 99.9 87.4 At3g16620 820913 ATTOC120 component of TOC complex, plastid protein import machinery. O.I. C.G. H.G.
86.7 99.9 43.9 At1g68170 843145 nodulin MtN21 family protein F:unknown;P:unknown;C:membrane;PBOAM O.I. C.G. H.G.
86.0 99.9 72.4 At1g16340 838203 ATKDSA2 Encodes a protein with putative 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase activity. This gene share a very high sequence homology with its homologue AtkdsA1 (AT1G79500). O.I. C.G. H.G.
85.7 99.9 45.4 At1g69440 843276 AGO7 (ARGONAUTE7) Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds. O.I. C.G. H.G.
82.4 99.9 13.6 At3g21800 821734 UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8) F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 4'-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMBOF O.I. C.G. H.G.
82.0 99.9 22.5 At3g26920 822308 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF O.I. C.G. H.G.
81.1 99.9 38.1 At2g35170 818084 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBPF O.I. C.G. H.G.
77.9 99.9 43.9 At4g00800 828005 binding / protein binding / zinc ion binding F:protein binding, binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;OMBFPAV O.I. C.G. H.G.
73.6 99.9 17.6 At5g59200 836038 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:unknown;C:endomembrane system;POMF O.I. C.G. H.G.
71.0 99.9 117.5 At1g53460 841781 unknown protein F:unknown;P:unknown;C:unknown;OMPFBAV O.I. C.G. H.G.
69.6 99.9 24.1 At5g52220 835298 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
69.5 99.9 74.3 At5g55640 835658 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
69.5 99.9 20.9 At1g60630 842357 leucine-rich repeat family protein F:protein kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
67.9 99.9 645.3 At5g38170 833797 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
67.7 99.9 479.1 At5g13000 831140 ATGSL12 (glucan synthase-like 12) encodes a gene similar to callose synthase O.I. C.G. H.G.
67.6 99.9 26.8 At2g37880 818364 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
65.2 99.8 49.6 At1g54160 841856 NF-YA5 (NUCLEAR FACTOR Y, SUBUNIT A5) Encodes a member of the CCAAT-binding transcription factor (CBF-B/NF-YA) family. Expression is upregulated in response to ABA and drought. This regulation appears to be mediated by MIR169A which is downregulated in response to drought. NFYA5 is a target of MIR169A. Loss of function mutations are hypersensitive to drought. O.I. C.G. H.G.
65.1 99.8 38.2 At5g25470 832621 DNA binding F:DNA binding;P:regulation of transcription, DNA-dependent;C:unknown;P O.I. C.G. H.G.
63.6 99.8 23.6 At2g01770 814708 VIT1 (vacuolar iron transporter 1) Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane. O.I. C.G. H.G.
63.1 99.8 83.1 At5g13520 831196 peptidase M1 family protein F:metallopeptidase activity, binding, zinc ion binding;P:proteolysis, leukotriene biosynthetic process;C:cellular_component unknown;BMOFAP O.I. C.G. H.G.
63.0 99.8 152.2 At3g02900 821188 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PB O.I. C.G. H.G.
60.4 99.8 37.7 At4g27240 828832 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PFO O.I. C.G. H.G.
60.1 99.8 140.8 At3g05600 819726 epoxide hydrolase, putative F:epoxide hydrolase activity, catalytic activity;P:unknown;C:unknown;BOMPFA O.I. C.G. H.G.
59.6 99.8 70.9 At1g50110 841433 branched-chain amino acid aminotransferase 6 / branched-chain amino acid transaminase 6 (BCAT6) F:branched-chain-amino-acid transaminase activity, catalytic activity;P:branched chain family amino acid metabolic process, metabolic process;C:cellular_component unknown;BOFMPA O.I. C.G. H.G.
59.5 99.8 30.8 At3g61360 825308 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:unknown;POFMBA O.I. C.G. H.G.
58.7 99.8 34.5 At1g63480 842654 DNA-binding family protein F:DNA binding;P:biological_process unknown;C:unknown;PMFOBV O.I. C.G. H.G.
57.0 99.8 35.1 At5g22810 832344 GDSL-motif lipase, putative F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
53.9 99.8 104.7 At1g79150 844256 binding F:binding;P:biological_process unknown;C:cellular_component unknown;OMFBPVA O.I. C.G. H.G.
53.3 99.8 185.4 At2g18390 816354 TTN5 (TITAN 5) Encodes a member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. Mutant has abnormal mitosis and cell cycle control during seed development. O.I. C.G. H.G.
50.9 99.8 38.5 At3g24495 822040 MSH7 (MUTS HOMOLOG 7) encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts. O.I. C.G. H.G.
50.6 99.8 244.2 At5g51210 835196 OLEO3 (OLEOSIN3) Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation. O.I. C.G. H.G.
49.9 99.8 71.9 At1g63260 842632 TET10 (TETRASPANIN10) Member of TETRASPANIN family O.I. C.G. H.G.
49.5 99.8 52.1 At4g16440 827338 ferredoxin hydrogenase Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inﬂUences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa. This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing. O.I. C.G. H.G.
48.8 99.8 134.1 At2g30200 817570 [acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferase F:binding, transferase activity, [acyl-carrier-protein] S-malonyltransferase activity, catalytic activity;P:fatty acid biosynthetic process, metabolic process;C:chloroplast, chloroplast stroma;BOFMP O.I. C.G. H.G.
48.8 99.8 27.9 At4g35540 829706 transcription regulator/ zinc ion binding F:transcription regulator activity, zinc ion binding;P:regulation of transcription, DNA-dependent, regulation of transcription, transcription initiation;C:transcription factor complex;AFOMP O.I. C.G. H.G.
48.6 99.8 122.7 At1g63050 842608 membrane bound O-acyl transferase (MBOAT) family protein F:acyltransferase activity;P:biological_process unknown;C:endomembrane system, membrane;MFOBP O.I. C.G. H.G.
48.2 99.8 19.7 At2g39120 818498 ubiquitin thiolesterase F:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:mitochondrion, intracellular;P O.I. C.G. H.G.
47.6 99.8 36.9 At3g26790 822293 FUS3 (FUSCA 3) Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed. O.I. C.G. H.G.
46.0 99.8 80.2 At1g77550 844091 protein binding / tubulin-tyrosine ligase F:protein binding, tubulin-tyrosine ligase activity;P:protein modification process;C:chloroplast;MOPFB O.I. C.G. H.G.
44.8 99.8 54.2 At1g30480 839927 DRT111 recombination and DNA-damage resistance protein (DRT111) O.I. C.G. H.G.
44.0 99.8 109.2 At1g08700 837391 presenilin family protein Encodes a protein similar to animal presenilin whose expression is increased in response to potassium (K+) deprivation. O.I. C.G. H.G.
43.6 99.8 527.5 At3g53730 824540 histone H4 F:DNA binding;P:nucleosome assembly;C:nucleus, nucleosome;MOPFV O.I. C.G. H.G.
43.4 99.8 405.4 At4g15910 827273 ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21) encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants. O.I. C.G. H.G.
43.4 99.8 111.9 At1g08460 837366 HDA08 F:histone deacetylase activity;P:histone deacetylation;C:cellular_component unknown;OBMFPA O.I. C.G. H.G.
43.2 99.8 19.3 At5g61800 836302 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF O.I. C.G. H.G.
42.8 99.8 65.9 At4g13050 826919 acyl-(acyl carrier protein) thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl-(acyl-carrier protein) hydrolase, putative / S-acyl fatty acid synthase thioesterase, putative F:acyl carrier activity;P:fatty acid biosynthetic process;C:chloroplast;BPOM O.I. C.G. H.G.
42.6 99.8 44.8 At2g37300 818307 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OFPMB O.I. C.G. H.G.
42.4 99.8 17.1 At5g62990 836419 emb1692 (embryo defective 1692) F:ubiquitin thiolesterase activity;P:embryonic development ending in seed dormancy;C:intracellular;POMFVB O.I. C.G. H.G.
42.0 99.8 70.1 At2g17640 816271 ATSERAT3 Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced after long-term sulfur starvation. O.I. C.G. H.G.
41.4 99.8 71.6 At1g63470 842653 DNA-binding family protein F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFBO O.I. C.G. H.G.
41.3 99.8 47.5 At5g51770 835251 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;PMOFBVA O.I. C.G. H.G.
40.9 99.8 94.3 At5g64816 836604 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
39.8 99.8 113.2 At5g13410 831182 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;BOPMFA O.I. C.G. H.G.
39.4 99.8 19.0 At4g05210 825869 bacterial transferase hexapeptide repeat-containing protein F:transferase activity;P:biological_process unknown;C:cellular_component unknown;BOAPFMV O.I. C.G. H.G.
38.6 99.8 100.1 At3g54750 824640 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO O.I. C.G. H.G.
37.8 99.8 115.7 At1g21880 838790 LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR) F:molecular_function unknown;P:cell wall macromolecule catabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PBOF O.I. C.G. H.G.
37.5 99.7 81.5 At1g75710 843905 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:unknown;C:intracellular;OPMF O.I. C.G. H.G.
37.5 99.7 30.8 At1g48360 841256 hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / zinc ion binding F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:mitochondrion;BFMOP O.I. C.G. H.G.
37.3 99.7 149.4 At4g38490 830005 unknown protein F:unknown;P:unknown;C:unknown;P O.I. C.G. H.G.
36.8 99.7 24.3 At4g01990 828172 pentatricopeptide (PPR) repeat-containing protein F:binding;P:biological_process unknown;C:cellular_component unknown;POFMB O.I. C.G. H.G.
35.6 99.7 21.9 At4g10640 826656 IQD16 (IQ-domain 16) F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PMOF O.I. C.G. H.G.
35.0 99.7 32.3 At4g22770 828376 DNA-binding family protein F:DNA binding;P:unknown;C:unknown;PBFMOV O.I. C.G. H.G.
34.8 99.7 26.4 At1g76710 844005 SDG26 (SET DOMAIN GROUP 26) F:histone-lysine N-methyltransferase activity;P:biological_process unknown;C:nucleus;MOPFBV O.I. C.G. H.G.
33.7 99.7 142.9 At4g29120 829033 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein F:coenzyme binding, oxidoreductase activity, phosphogluconate dehydrogenase (decarboxylating) activity, binding, catalytic activity;P:pentose-phosphate shunt, metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
33.3 99.7 81.2 At1g72090 843540 radical SAM domain-containing protein / TRAM domain-containing protein F:iron-sulfur cluster binding, catalytic activity;P:metabolic process;C:endoplasmic reticulum, membrane;OBAMP O.I. C.G. H.G.
33.1 99.7 71.0 At5g45600 834599 GAS41 The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man. O.I. C.G. H.G.
32.6 99.7 137.9 At2g40660 818661 tRNA-binding region domain-containing protein F:tRNA binding;P:tRNA aminoacylation for protein translation;C:unknown;BOMAFPV O.I. C.G. H.G.
32.4 99.7 21.8 At3g58975 3769738 - pseudogene of F-box family protein O.I. C.G. H.G.
32.2 99.7 108.0 At5g23310 832395 FSD3 (FE SUPEROXIDE DISMUTASE 3) Fe superoxide dismutase O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
754.8	100.0	148.6	At1g74420	843783	FUT3 (FUCOSYLTRANSFERASE 3)	Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundantwith FUT1.	O.I.	C.G.	H.G.
741.0	100.0	504.1	At1g63100	842613	scarecrow transcription factor family protein	F:transcription factor activity;P:regulation of transcription;C:unknown;POMB	O.I.	C.G.	H.G.
620.9	100.0	53.2	At4g15720	827250	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF	O.I.	C.G.	H.G.
601.6	100.0	153.7	At5g50110	835075	-	F:molecular_function unknown;P:cell cycle;C:cellular_component unknown;BOPM	O.I.	C.G.	H.G.
362.7	100.0	129.6	At1g29270	839801	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
342.5	100.0	126.5	At5g09230	830782	SRT2 (SIRTUIN 2)	Encodes SRT2, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).	O.I.	C.G.	H.G.
243.2	100.0	92.0	At1g15150	838080	MATE efflux family protein	F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
221.0	100.0	275.6	At1g71691	843496	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:unknown;PBFOM	O.I.	C.G.	H.G.
214.2	100.0	147.7	At1g12330	837787	unknown protein	F:unknown;P:biological_process unknown;C:chloroplast;PFOM	O.I.	C.G.	H.G.
173.5	100.0	41.5	At4g01930	828198	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
167.6	100.0	362.8	At1g47540	841163	trypsin inhibitor, putative	F:ion channel inhibitor activity;P:defense response;C:endomembrane system, extracellular region;PO	O.I.	C.G.	H.G.
160.5	99.9	73.2	At4g29240	829045	leucine-rich repeat family protein / extensin family protein	F:protein binding;P:biological_process unknown;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
140.5	99.9	263.6	At3g07030	3768790	nucleic acid binding	F:nucleic acid binding;P:unknown;C:unknown	O.I.	C.G.	H.G.
138.7	99.9	102.2	At5g08460	830745	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
133.0	99.9	46.9	At5g03800	831717	EMB175 (EMBRYO DEFECTIVE 175)	Encodes a protein with a large central domain of 14 internal pentatricopeptide motifs (some degenerate) arranged in tandem. Mutations in this locus result in embryo lethality.	O.I.	C.G.	H.G.
129.1	99.9	133.6	At1g13740	837934	AFP2 (ABI FIVE BINDING PROTEIN 2)	Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent.	O.I.	C.G.	H.G.
123.4	99.9	179.0	At1g72340	843566	eukaryotic translation initiation factor 2B family protein / eIF-2B family protein	F:GTP binding, translation initiation factor activity;P:translational initiation, cellular metabolic process;C:eukaryotic translation initiation factor 2B complex;OBMFAP	O.I.	C.G.	H.G.
120.1	99.9	297.5	At4g08350	826391	GTA2 (GLOBAL TRANSCRIPTION FACTOR GROUP A2)	F:transcription elongation regulator activity, structural constituent of ribosome, transcription factor activity;P:translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter;C:ribosome, intracellular;MOFPBVA	O.I.	C.G.	H.G.
114.6	99.9	78.6	At5g05480	830431	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:vacuole;FPABO	O.I.	C.G.	H.G.
113.1	99.9	44.6	At3g53450	824513	unknown protein	F:molecular_function unknown;P:lysine biosynthetic process via diaminopimelate;C:cellular_component unknown;BOPFMA	O.I.	C.G.	H.G.
112.5	99.9	68.2	At3g58530	825022	F-box family protein-related	F:unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBV	O.I.	C.G.	H.G.
111.3	99.9	72.1	At1g04020	839329	BARD1 (BREAST CANCER ASSOCIATED RING 1)	Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent protein�protein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.	O.I.	C.G.	H.G.
110.2	99.9	201.9	At5g55920	835690	nucleolar protein, putative	F:S-adenosylmethionine-dependent methyltransferase activity, RNA binding;P:rRNA processing;C:nucleolus;BMOFPVA	O.I.	C.G.	H.G.
107.7	99.9	35.3	At3g24340	822023	chr40 (chromatin remodeling 40)	F:helicase activity, DNA binding, ATP binding, nucleic acid binding;P:unknown;C:unknown;BMOFPVA	O.I.	C.G.	H.G.
107.6	99.9	35.4	At4g32450	829380	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:biological_process unknown;C:mitochondrion;POFM	O.I.	C.G.	H.G.
95.1	99.9	29.3	At2g23510	816883	SDT (SPERMIDINE DISINAPOYL ACYLTRANSFERASE)	F:spermidine:sinapoyl CoA N-acyltransferase activity, sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
94.1	99.9	39.8	At1g04150	839249	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBV	O.I.	C.G.	H.G.
93.1	99.9	180.6	At1g21570	838758	zinc finger (CCCH-type) family protein	F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:unknown;MFPO	O.I.	C.G.	H.G.
90.5	99.9	48.6	At3g26750	822288	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
90.2	99.9	52.4	At3g58540	825023	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
88.9	99.9	29.9	At3g22900	821862	NRPD7	Non-catalytic subunit specific to DNA-directed RNA polymerase IV; homologous to budding yeast RPB7	O.I.	C.G.	H.G.
88.7	99.9	87.4	At3g16620	820913	ATTOC120	component of TOC complex, plastid protein import machinery.	O.I.	C.G.	H.G.
86.7	99.9	43.9	At1g68170	843145	nodulin MtN21 family protein	F:unknown;P:unknown;C:membrane;PBOAM	O.I.	C.G.	H.G.
86.0	99.9	72.4	At1g16340	838203	ATKDSA2	Encodes a protein with putative 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase activity. This gene share a very high sequence homology with its homologue AtkdsA1 (AT1G79500).	O.I.	C.G.	H.G.
85.7	99.9	45.4	At1g69440	843276	AGO7 (ARGONAUTE7)	Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds.	O.I.	C.G.	H.G.
82.4	99.9	13.6	At3g21800	821734	UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8)	F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, quercetin 4'-O-glucosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMBOF	O.I.	C.G.	H.G.
82.0	99.9	22.5	At3g26920	822308	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF	O.I.	C.G.	H.G.
81.1	99.9	38.1	At2g35170	818084	MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBPF	O.I.	C.G.	H.G.
77.9	99.9	43.9	At4g00800	828005	binding / protein binding / zinc ion binding	F:protein binding, binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;OMBFPAV	O.I.	C.G.	H.G.
73.6	99.9	17.6	At5g59200	836038	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:unknown;C:endomembrane system;POMF	O.I.	C.G.	H.G.
71.0	99.9	117.5	At1g53460	841781	unknown protein	F:unknown;P:unknown;C:unknown;OMPFBAV	O.I.	C.G.	H.G.
69.6	99.9	24.1	At5g52220	835298	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
69.5	99.9	74.3	At5g55640	835658	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
69.5	99.9	20.9	At1g60630	842357	leucine-rich repeat family protein	F:protein kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
67.9	99.9	645.3	At5g38170	833797	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
67.7	99.9	479.1	At5g13000	831140	ATGSL12 (glucan synthase-like 12)	encodes a gene similar to callose synthase	O.I.	C.G.	H.G.
67.6	99.9	26.8	At2g37880	818364	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
65.2	99.8	49.6	At1g54160	841856	NF-YA5 (NUCLEAR FACTOR Y, SUBUNIT A5)	Encodes a member of the CCAAT-binding transcription factor (CBF-B/NF-YA) family. Expression is upregulated in response to ABA and drought. This regulation appears to be mediated by MIR169A which is downregulated in response to drought. NFYA5 is a target of MIR169A. Loss of function mutations are hypersensitive to drought.	O.I.	C.G.	H.G.
65.1	99.8	38.2	At5g25470	832621	DNA binding	F:DNA binding;P:regulation of transcription, DNA-dependent;C:unknown;P	O.I.	C.G.	H.G.
63.6	99.8	23.6	At2g01770	814708	VIT1 (vacuolar iron transporter 1)	Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.	O.I.	C.G.	H.G.
63.1	99.8	83.1	At5g13520	831196	peptidase M1 family protein	F:metallopeptidase activity, binding, zinc ion binding;P:proteolysis, leukotriene biosynthetic process;C:cellular_component unknown;BMOFAP	O.I.	C.G.	H.G.
63.0	99.8	152.2	At3g02900	821188	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PB	O.I.	C.G.	H.G.
60.4	99.8	37.7	At4g27240	828832	zinc finger (C2H2 type) family protein	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PFO	O.I.	C.G.	H.G.
60.1	99.8	140.8	At3g05600	819726	epoxide hydrolase, putative	F:epoxide hydrolase activity, catalytic activity;P:unknown;C:unknown;BOMPFA	O.I.	C.G.	H.G.
59.6	99.8	70.9	At1g50110	841433	branched-chain amino acid aminotransferase 6 / branched-chain amino acid transaminase 6 (BCAT6)	F:branched-chain-amino-acid transaminase activity, catalytic activity;P:branched chain family amino acid metabolic process, metabolic process;C:cellular_component unknown;BOFMPA	O.I.	C.G.	H.G.
59.5	99.8	30.8	At3g61360	825308	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:biological_process unknown;C:unknown;POFMBA	O.I.	C.G.	H.G.
58.7	99.8	34.5	At1g63480	842654	DNA-binding family protein	F:DNA binding;P:biological_process unknown;C:unknown;PMFOBV	O.I.	C.G.	H.G.
57.0	99.8	35.1	At5g22810	832344	GDSL-motif lipase, putative	F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
53.9	99.8	104.7	At1g79150	844256	binding	F:binding;P:biological_process unknown;C:cellular_component unknown;OMFBPVA	O.I.	C.G.	H.G.
53.3	99.8	185.4	At2g18390	816354	TTN5 (TITAN 5)	Encodes a member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. Mutant has abnormal mitosis and cell cycle control during seed development.	O.I.	C.G.	H.G.
50.9	99.8	38.5	At3g24495	822040	MSH7 (MUTS HOMOLOG 7)	encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.	O.I.	C.G.	H.G.
50.6	99.8	244.2	At5g51210	835196	OLEO3 (OLEOSIN3)	Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation.	O.I.	C.G.	H.G.
49.9	99.8	71.9	At1g63260	842632	TET10 (TETRASPANIN10)	Member of TETRASPANIN family	O.I.	C.G.	H.G.
49.5	99.8	52.1	At4g16440	827338	ferredoxin hydrogenase	Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inﬂUences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa. This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.	O.I.	C.G.	H.G.
48.8	99.8	134.1	At2g30200	817570	[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferase	F:binding, transferase activity, [acyl-carrier-protein] S-malonyltransferase activity, catalytic activity;P:fatty acid biosynthetic process, metabolic process;C:chloroplast, chloroplast stroma;BOFMP	O.I.	C.G.	H.G.
48.8	99.8	27.9	At4g35540	829706	transcription regulator/ zinc ion binding	F:transcription regulator activity, zinc ion binding;P:regulation of transcription, DNA-dependent, regulation of transcription, transcription initiation;C:transcription factor complex;AFOMP	O.I.	C.G.	H.G.
48.6	99.8	122.7	At1g63050	842608	membrane bound O-acyl transferase (MBOAT) family protein	F:acyltransferase activity;P:biological_process unknown;C:endomembrane system, membrane;MFOBP	O.I.	C.G.	H.G.
48.2	99.8	19.7	At2g39120	818498	ubiquitin thiolesterase	F:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:mitochondrion, intracellular;P	O.I.	C.G.	H.G.
47.6	99.8	36.9	At3g26790	822293	FUS3 (FUSCA 3)	Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed.	O.I.	C.G.	H.G.
46.0	99.8	80.2	At1g77550	844091	protein binding / tubulin-tyrosine ligase	F:protein binding, tubulin-tyrosine ligase activity;P:protein modification process;C:chloroplast;MOPFB	O.I.	C.G.	H.G.
44.8	99.8	54.2	At1g30480	839927	DRT111	recombination and DNA-damage resistance protein (DRT111)	O.I.	C.G.	H.G.
44.0	99.8	109.2	At1g08700	837391	presenilin family protein	Encodes a protein similar to animal presenilin whose expression is increased in response to potassium (K+) deprivation.	O.I.	C.G.	H.G.
43.6	99.8	527.5	At3g53730	824540	histone H4	F:DNA binding;P:nucleosome assembly;C:nucleus, nucleosome;MOPFV	O.I.	C.G.	H.G.
43.4	99.8	405.4	At4g15910	827273	ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21)	encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants.	O.I.	C.G.	H.G.
43.4	99.8	111.9	At1g08460	837366	HDA08	F:histone deacetylase activity;P:histone deacetylation;C:cellular_component unknown;OBMFPA	O.I.	C.G.	H.G.
43.2	99.8	19.3	At5g61800	836302	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF	O.I.	C.G.	H.G.
42.8	99.8	65.9	At4g13050	826919	acyl-(acyl carrier protein) thioesterase, putative / acyl-ACP thioesterase, putative / oleoyl-(acyl-carrier protein) hydrolase, putative / S-acyl fatty acid synthase thioesterase, putative	F:acyl carrier activity;P:fatty acid biosynthetic process;C:chloroplast;BPOM	O.I.	C.G.	H.G.
42.6	99.8	44.8	At2g37300	818307	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OFPMB	O.I.	C.G.	H.G.
42.4	99.8	17.1	At5g62990	836419	emb1692 (embryo defective 1692)	F:ubiquitin thiolesterase activity;P:embryonic development ending in seed dormancy;C:intracellular;POMFVB	O.I.	C.G.	H.G.
42.0	99.8	70.1	At2g17640	816271	ATSERAT3	Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced after long-term sulfur starvation.	O.I.	C.G.	H.G.
41.4	99.8	71.6	At1g63470	842653	DNA-binding family protein	F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFBO	O.I.	C.G.	H.G.
41.3	99.8	47.5	At5g51770	835251	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;PMOFBVA	O.I.	C.G.	H.G.
40.9	99.8	94.3	At5g64816	836604	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
39.8	99.8	113.2	At5g13410	831182	immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein	F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;BOPMFA	O.I.	C.G.	H.G.
39.4	99.8	19.0	At4g05210	825869	bacterial transferase hexapeptide repeat-containing protein	F:transferase activity;P:biological_process unknown;C:cellular_component unknown;BOAPFMV	O.I.	C.G.	H.G.
38.6	99.8	100.1	At3g54750	824640	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO	O.I.	C.G.	H.G.
37.8	99.8	115.7	At1g21880	838790	LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR)	F:molecular_function unknown;P:cell wall macromolecule catabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PBOF	O.I.	C.G.	H.G.
37.5	99.7	81.5	At1g75710	843905	zinc finger (C2H2 type) family protein	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:unknown;C:intracellular;OPMF	O.I.	C.G.	H.G.
37.5	99.7	30.8	At1g48360	841256	hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding / zinc ion binding	F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, zinc ion binding, nucleic acid binding;P:biological_process unknown;C:mitochondrion;BFMOP	O.I.	C.G.	H.G.
37.3	99.7	149.4	At4g38490	830005	unknown protein	F:unknown;P:unknown;C:unknown;P	O.I.	C.G.	H.G.
36.8	99.7	24.3	At4g01990	828172	pentatricopeptide (PPR) repeat-containing protein	F:binding;P:biological_process unknown;C:cellular_component unknown;POFMB	O.I.	C.G.	H.G.
35.6	99.7	21.9	At4g10640	826656	IQD16 (IQ-domain 16)	F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PMOF	O.I.	C.G.	H.G.
35.0	99.7	32.3	At4g22770	828376	DNA-binding family protein	F:DNA binding;P:unknown;C:unknown;PBFMOV	O.I.	C.G.	H.G.
34.8	99.7	26.4	At1g76710	844005	SDG26 (SET DOMAIN GROUP 26)	F:histone-lysine N-methyltransferase activity;P:biological_process unknown;C:nucleus;MOPFBV	O.I.	C.G.	H.G.
33.7	99.7	142.9	At4g29120	829033	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein	F:coenzyme binding, oxidoreductase activity, phosphogluconate dehydrogenase (decarboxylating) activity, binding, catalytic activity;P:pentose-phosphate shunt, metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
33.3	99.7	81.2	At1g72090	843540	radical SAM domain-containing protein / TRAM domain-containing protein	F:iron-sulfur cluster binding, catalytic activity;P:metabolic process;C:endoplasmic reticulum, membrane;OBAMP	O.I.	C.G.	H.G.
33.1	99.7	71.0	At5g45600	834599	GAS41	The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man.	O.I.	C.G.	H.G.
32.6	99.7	137.9	At2g40660	818661	tRNA-binding region domain-containing protein	F:tRNA binding;P:tRNA aminoacylation for protein translation;C:unknown;BOMAFPV	O.I.	C.G.	H.G.
32.4	99.7	21.8	At3g58975	3769738	-	pseudogene of F-box family protein	O.I.	C.G.	H.G.
32.2	99.7	108.0	At5g23310	832395	FSD3 (FE SUPEROXIDE DISMUTASE 3)	Fe superoxide dismutase	O.I.	C.G.	H.G.

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GSM ID	GSM133767
Assay name	Lindsey_1-19_torpedo-basal_Rep4_ATH1
GSE experiment	GSE5730: Transcriptional profiling of laser-capture micro-dissected embryonic tissues

Microarray experiments to specifically-expressed genes

GSM ID GSM133767 Assay name Lindsey_1-19_torpedo-basal_Rep4_ATH1 GSE experiment GSE5730: Transcriptional profiling of laser-capture micro-dissected embryonic tissues

GSM ID GSM133767

Assay name Lindsey_1-19_torpedo-basal_Rep4_ATH1

GSE experiment GSE5730: Transcriptional profiling of laser-capture micro-dissected embryonic tissues