CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133752

Assay name Turner_A-6-Turne-WT-Top2_SLD

GSE experiment GSE5729: Role of COV in vascular patterning

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
106.1 99.9 102.5 At5g48210 834874 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
81.3 99.9 97.8 At1g30020 839881 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
78.1 99.9 135.5 At1g06260 837137 cysteine proteinase, putative F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
58.6 99.8 185.0 At1g75910 843924 EXL4 member of Lipase proteins O.I. C.G. H.G.
56.3 99.8 67.6 At3g26125 822212 CYP86C2 encodes a protein with cytochrome P450 domain O.I. C.G. H.G.
56.2 99.8 66.9 At4g14815 827138 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;P O.I. C.G. H.G.
54.9 99.8 71.3 At1g20120 838601 family II extracellular lipase, putative F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMAV O.I. C.G. H.G.
54.7 99.8 71.7 At5g16920 831555 - F:molecular_function unknown;P:unknown;C:endomembrane system;PO O.I. C.G. H.G.
53.1 99.8 44.6 At1g74550 843796 CYP98A9 member of CYP98A O.I. C.G. H.G.
50.9 99.8 146.5 At1g33430 840236 galactosyltransferase family protein F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:pollen exine formation;C:endomembrane system, membrane;MPO O.I. C.G. H.G.
49.5 99.8 46.5 At1g74540 843795 CYP98A8 member of CYP98A O.I. C.G. H.G.
48.5 99.8 27.7 At1g72110 843542 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAF O.I. C.G. H.G.
48.4 99.8 150.9 At3g25050 822096 XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3) encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment. O.I. C.G. H.G.
47.1 99.8 223.9 At3g51590 824322 LTP12 (LIPID TRANSFER PROTEIN 12) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. O.I. C.G. H.G.
46.3 99.8 186.7 At1g68875 843220 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
43.2 99.8 85.9 At4g28395 828956 ATA7 related to lipid transfer proteins O.I. C.G. H.G.
42.6 99.8 19.7 At3g61950 825368 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
42.1 99.8 461.8 At3g15400 820779 ATA20 Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein. O.I. C.G. H.G.
41.2 99.8 68.5 At5g16960 831559 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:response to oxidative stress;C:unknown;BOMFPA O.I. C.G. H.G.
41.0 99.8 57.7 At1g62940 842596 ACOS5 (ACYL-COA SYNTHETASE 5) encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile. O.I. C.G. H.G.
40.9 99.8 152.6 At5g62080 836328 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
40.1 99.8 136.2 At1g67990 843127 TSM1 Encodes a tapetum-specific O-methyltransferase. In vitro enzyme assay indicated activity with caffeoyl-CoA, caffeoyl glucose, chlorogenic acid and polyamine conjugates. RNAi mutants had impaired silique development and seed setting. O.I. C.G. H.G.
39.7 99.8 421.5 At1g66850 843003 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
39.2 99.8 62.0 At1g12570 837814 glucose-methanol-choline (GMC) oxidoreductase family protein F:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVA O.I. C.G. H.G.
38.7 99.8 108.2 At4g14080 827044 MEE48 (maternal effect embryo arrest 48) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;PO O.I. C.G. H.G.
37.8 99.8 66.0 At1g61110 842404 anac025 (Arabidopsis NAC domain containing protein 25) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO O.I. C.G. H.G.
36.3 99.7 122.5 At5g07230 830614 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
36.0 99.7 370.6 At5g07550 830648 GRP19 (GLYCINE-RICH PROTEIN 19) member of Oleosin-like protein family O.I. C.G. H.G.
36.0 99.7 182.0 At5g07560 830649 GRP20 (GLYCINE-RICH PROTEIN 20) Lipid-binding oleosins, glycine-rich protein. O.I. C.G. H.G.
35.4 99.7 139.5 At1g57750 842150 CYP96A15 (CYTOCHROME P450 96 A1) Encodes a CYP96A15, midchain alkane hydroxylase, involved in cuticular wax biosynthesis. O.I. C.G. H.G.
34.8 99.7 17.4 At4g29250 829046 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
34.3 99.7 82.3 At4g37900 829946 glycine-rich protein F:unknown;P:biological_process unknown;C:cellular_component unknown;BMPOFVA O.I. C.G. H.G.
33.2 99.7 30.2 At3g23770 821959 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO O.I. C.G. H.G.
32.4 99.7 170.7 At1g75940 843927 ATA27 encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen. O.I. C.G. H.G.
30.8 99.7 49.3 At5g07510 830644 GRP14 encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers. O.I. C.G. H.G.
29.7 99.7 47.0 At1g13140 837871 CYP86C3 member of CYP86C O.I. C.G. H.G.
29.5 99.7 60.5 At1g68540 843183 oxidoreductase family protein F:coenzyme binding, oxidoreductase activity, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:cellular_component unknown;BOPFMAV O.I. C.G. H.G.
29.5 99.7 24.3 At3g57620 824931 glyoxal oxidase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPOM O.I. C.G. H.G.
29.1 99.7 62.2 At2g03740 814901 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBMOFA O.I. C.G. H.G.
28.8 99.7 32.5 At1g08065 837324 ACA5 (ALPHA CARBONIC ANHYDRASE 5) F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process;C:endomembrane system;MBPOFV O.I. C.G. H.G.
28.1 99.7 109.0 At4g20420 827790 tapetum-specific protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
27.9 99.7 64.9 At1g02813 839360 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
27.3 99.7 26.1 At3g06100 819783 NIP7 F:water channel activity;P:transport;C:membrane;BPMOFAV O.I. C.G. H.G.
27.0 99.7 23.3 At3g13220 820512 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMAFPV O.I. C.G. H.G.
26.6 99.7 47.7 At1g69500 843283 electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:pollen exine formation;C:cellular_component unknown;MPFBOAV O.I. C.G. H.G.
26.5 99.7 33.5 At2g19070 816424 SHT (SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE) encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091) O.I. C.G. H.G.
25.2 99.6 25.6 At1g60060 842300 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPFMB O.I. C.G. H.G.
24.9 99.6 35.9 At3g52160 824381 KCS15 (3-KETOACYL-COA SYNTHASE 15) Encodes KCS15, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
23.8 99.6 14.2 At4g04760 825812 sugar transporter family protein F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA O.I. C.G. H.G.
23.6 99.6 68.8 At3g52130 824377 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
23.6 99.6 65.7 At2g03850 814911 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBOMFA O.I. C.G. H.G.
23.6 99.6 11.3 At5g62320 836353 ATMYB99 (MYB DOMAIN PROTEIN 99) Encodes a putative transcription factor (MYB99). O.I. C.G. H.G.
23.3 99.6 36.2 At1g23570 838967 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
22.3 99.6 71.9 At3g18850 821418 LPAT5 F:acyltransferase activity;P:metabolic process;C:unknown;MBOFPV O.I. C.G. H.G.
20.8 99.6 333.8 At2g20870 816620 cell wall protein precursor, putative F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPMF O.I. C.G. H.G.
20.8 99.6 73.4 At1g69120 843244 AP1 (APETALA1) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24. O.I. C.G. H.G.
20.4 99.6 40.5 At1g28375 839734 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
20.2 99.6 67.9 At3g16500 820898 PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1) phytochrome-associated protein 1 (PAP1) O.I. C.G. H.G.
19.0 99.5 12.6 At1g26710 839212 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
18.9 99.5 20.8 At1g13150 837873 CYP86C4 member of CYP86C O.I. C.G. H.G.
18.9 99.5 17.5 At1g75790 843912 sks18 (SKU5 Similar 18) F:pectinesterase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA O.I. C.G. H.G.
18.6 99.5 13.8 At1g26310 839172 CAL (CAULIFLOWER) Floral homeotic gene encoding a MADS domain protein homologous to AP1. Enhances the flower to shoot transformation in ap1 mutants. O.I. C.G. H.G.
18.1 99.5 47.5 At3g42960 823352 ATA1 (ARABIDOPSIS TAPETUM 1) Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells. O.I. C.G. H.G.
18.1 99.5 30.4 At5g13380 831179 auxin-responsive GH3 family protein F:unknown;P:response to auxin stimulus;C:cellular_component unknown;OBPMF O.I. C.G. H.G.
18.0 99.5 58.7 At4g35420 829695 dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family F:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAV O.I. C.G. H.G.
17.8 99.5 10.6 At5g49070 834966 KCS21 (3-KETOACYL-COA SYNTHASE 21) Encodes KCS21, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
17.5 99.5 100.6 At1g75930 843926 EXL6 member of Lipase proteins O.I. C.G. H.G.
17.0 99.5 208.7 At5g33370 833315 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
17.0 99.5 65.1 At4g33790 829521 CER4 (ECERIFERUM 4) Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces. O.I. C.G. H.G.
16.6 99.5 11.3 At1g06990 837209 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
16.4 99.5 102.7 At1g47980 841216 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PB O.I. C.G. H.G.
16.4 99.5 64.5 At5g44400 834466 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:cell wall;BFOPAM O.I. C.G. H.G.
16.3 99.5 29.6 At5g07520 830645 GRP18 (GLYCINE-RICH PROTEIN 18) encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12). O.I. C.G. H.G.
16.1 99.5 143.8 At2g21130 816648 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase F:peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:plasma membrane;OBMFPAV O.I. C.G. H.G.
15.9 99.5 14.3 At1g23600 838970 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
15.5 99.5 84.1 At2g22980 816829 serine-type carboxypeptidase F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO O.I. C.G. H.G.
15.5 99.5 44.4 At4g34850 829637 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOF O.I. C.G. H.G.
15.3 99.4 26.6 At5g65205 836644 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
15.2 99.4 15.6 At1g71160 843456 KCS7 (3-KETOACYL-COA SYNTHASE 7) Encodes KCS7, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
14.7 99.4 37.9 At1g76470 843980 3-beta-hydroxy-delta5-steroid dehydrogenase/ binding / catalytic/ cinnamoyl-CoA reductase F:3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, steroid biosynthetic process, metabolic process;C:endomembrane system;OBPFMAV O.I. C.G. H.G.
14.6 99.4 325.1 At5g59310 836050 LTP4 (LIPID TRANSFER PROTEIN 4) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. O.I. C.G. H.G.
14.6 99.4 7.7 At5g14980 831350 esterase/lipase/thioesterase family protein F:catalytic activity;P:unknown;C:unknown;BOPMFVA O.I. C.G. H.G.
14.5 99.4 151.9 At5g22430 832304 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
14.1 99.4 13.3 At3g30460 822758 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB O.I. C.G. H.G.
13.9 99.4 30.3 At1g75920 843925 family II extracellular lipase 5 (EXL5) F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM O.I. C.G. H.G.
13.9 99.4 14.4 At5g25390 832611 SHN2 (shine2) encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. O.I. C.G. H.G.
13.8 99.4 10.0 At2g31900 817748 XIF Encodes an novel myosin isoform. O.I. C.G. H.G.
13.7 99.4 24.1 At4g19240 827664 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
13.5 99.4 166.5 At4g04460 825776 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis, lipid metabolic process;C:endomembrane system;MFOPB O.I. C.G. H.G.
13.0 99.4 14.3 At1g32780 840172 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:unknown;BOPFMAV O.I. C.G. H.G.
12.8 99.3 20.1 At4g22160 828305 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
12.6 99.3 39.5 At3g57810 824950 OTU-like cysteine protease family protein F:cysteine-type peptidase activity;P:biological_process unknown;C:unknown;MPOF O.I. C.G. H.G.
12.5 99.3 15.8 At1g69080 843240 universal stress protein (USP) family protein F:molecular_function unknown;P:response to stress;C:unknown;PM O.I. C.G. H.G.
12.3 99.3 42.3 At4g21650 828252 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:plant-type cell wall;BPOFAM O.I. C.G. H.G.
12.3 99.3 12.3 At3g48550 824014 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
12.2 99.3 45.3 At3g07450 819933 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
12.2 99.3 23.4 At4g29980 829121 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
11.9 99.3 33.8 At3g11980 820372 MS2 (MALE STERILITY 2) Similar to fatty acid reductases. O.I. C.G. H.G.
11.9 99.3 11.1 At4g28090 828925 sks10 (SKU5 Similar 10) F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA O.I. C.G. H.G.
11.8 99.3 29.4 At3g44070 823525 beta-galactosidase F:beta-galactosidase activity;P:carbohydrate metabolic process;C:beta-galactosidase complex;P O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
106.1	99.9	102.5	At5g48210	834874	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
81.3	99.9	97.8	At1g30020	839881	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
78.1	99.9	135.5	At1g06260	837137	cysteine proteinase, putative	F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
58.6	99.8	185.0	At1g75910	843924	EXL4	member of Lipase proteins	O.I.	C.G.	H.G.
56.3	99.8	67.6	At3g26125	822212	CYP86C2	encodes a protein with cytochrome P450 domain	O.I.	C.G.	H.G.
56.2	99.8	66.9	At4g14815	827138	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:anchored to membrane;P	O.I.	C.G.	H.G.
54.9	99.8	71.3	At1g20120	838601	family II extracellular lipase, putative	F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMAV	O.I.	C.G.	H.G.
54.7	99.8	71.7	At5g16920	831555	-	F:molecular_function unknown;P:unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
53.1	99.8	44.6	At1g74550	843796	CYP98A9	member of CYP98A	O.I.	C.G.	H.G.
50.9	99.8	146.5	At1g33430	840236	galactosyltransferase family protein	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:pollen exine formation;C:endomembrane system, membrane;MPO	O.I.	C.G.	H.G.
49.5	99.8	46.5	At1g74540	843795	CYP98A8	member of CYP98A	O.I.	C.G.	H.G.
48.5	99.8	27.7	At1g72110	843542	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAF	O.I.	C.G.	H.G.
48.4	99.8	150.9	At3g25050	822096	XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3)	encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment.	O.I.	C.G.	H.G.
47.1	99.8	223.9	At3g51590	824322	LTP12 (LIPID TRANSFER PROTEIN 12)	Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.	O.I.	C.G.	H.G.
46.3	99.8	186.7	At1g68875	843220	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
43.2	99.8	85.9	At4g28395	828956	ATA7	related to lipid transfer proteins	O.I.	C.G.	H.G.
42.6	99.8	19.7	At3g61950	825368	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
42.1	99.8	461.8	At3g15400	820779	ATA20	Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein.	O.I.	C.G.	H.G.
41.2	99.8	68.5	At5g16960	831559	NADP-dependent oxidoreductase, putative	F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:response to oxidative stress;C:unknown;BOMFPA	O.I.	C.G.	H.G.
41.0	99.8	57.7	At1g62940	842596	ACOS5 (ACYL-COA SYNTHETASE 5)	encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.	O.I.	C.G.	H.G.
40.9	99.8	152.6	At5g62080	836328	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
40.1	99.8	136.2	At1g67990	843127	TSM1	Encodes a tapetum-specific O-methyltransferase. In vitro enzyme assay indicated activity with caffeoyl-CoA, caffeoyl glucose, chlorogenic acid and polyamine conjugates. RNAi mutants had impaired silique development and seed setting.	O.I.	C.G.	H.G.
39.7	99.8	421.5	At1g66850	843003	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
39.2	99.8	62.0	At1g12570	837814	glucose-methanol-choline (GMC) oxidoreductase family protein	F:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVA	O.I.	C.G.	H.G.
38.7	99.8	108.2	At4g14080	827044	MEE48 (maternal effect embryo arrest 48)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;PO	O.I.	C.G.	H.G.
37.8	99.8	66.0	At1g61110	842404	anac025 (Arabidopsis NAC domain containing protein 25)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
36.3	99.7	122.5	At5g07230	830614	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
36.0	99.7	370.6	At5g07550	830648	GRP19 (GLYCINE-RICH PROTEIN 19)	member of Oleosin-like protein family	O.I.	C.G.	H.G.
36.0	99.7	182.0	At5g07560	830649	GRP20 (GLYCINE-RICH PROTEIN 20)	Lipid-binding oleosins, glycine-rich protein.	O.I.	C.G.	H.G.
35.4	99.7	139.5	At1g57750	842150	CYP96A15 (CYTOCHROME P450 96 A1)	Encodes a CYP96A15, midchain alkane hydroxylase, involved in cuticular wax biosynthesis.	O.I.	C.G.	H.G.
34.8	99.7	17.4	At4g29250	829046	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
34.3	99.7	82.3	At4g37900	829946	glycine-rich protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;BMPOFVA	O.I.	C.G.	H.G.
33.2	99.7	30.2	At3g23770	821959	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO	O.I.	C.G.	H.G.
32.4	99.7	170.7	At1g75940	843927	ATA27	encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen.	O.I.	C.G.	H.G.
30.8	99.7	49.3	At5g07510	830644	GRP14	encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers.	O.I.	C.G.	H.G.
29.7	99.7	47.0	At1g13140	837871	CYP86C3	member of CYP86C	O.I.	C.G.	H.G.
29.5	99.7	60.5	At1g68540	843183	oxidoreductase family protein	F:coenzyme binding, oxidoreductase activity, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:cellular_component unknown;BOPFMAV	O.I.	C.G.	H.G.
29.5	99.7	24.3	At3g57620	824931	glyoxal oxidase-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPOM	O.I.	C.G.	H.G.
29.1	99.7	62.2	At2g03740	814901	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBMOFA	O.I.	C.G.	H.G.
28.8	99.7	32.5	At1g08065	837324	ACA5 (ALPHA CARBONIC ANHYDRASE 5)	F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process;C:endomembrane system;MBPOFV	O.I.	C.G.	H.G.
28.1	99.7	109.0	At4g20420	827790	tapetum-specific protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
27.9	99.7	64.9	At1g02813	839360	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
27.3	99.7	26.1	At3g06100	819783	NIP7	F:water channel activity;P:transport;C:membrane;BPMOFAV	O.I.	C.G.	H.G.
27.0	99.7	23.3	At3g13220	820512	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
26.6	99.7	47.7	At1g69500	843283	electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding	F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:pollen exine formation;C:cellular_component unknown;MPFBOAV	O.I.	C.G.	H.G.
26.5	99.7	33.5	At2g19070	816424	SHT (SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE)	encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091)	O.I.	C.G.	H.G.
25.2	99.6	25.6	At1g60060	842300	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPFMB	O.I.	C.G.	H.G.
24.9	99.6	35.9	At3g52160	824381	KCS15 (3-KETOACYL-COA SYNTHASE 15)	Encodes KCS15, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
23.8	99.6	14.2	At4g04760	825812	sugar transporter family protein	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA	O.I.	C.G.	H.G.
23.6	99.6	68.8	At3g52130	824377	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
23.6	99.6	65.7	At2g03850	814911	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBOMFA	O.I.	C.G.	H.G.
23.6	99.6	11.3	At5g62320	836353	ATMYB99 (MYB DOMAIN PROTEIN 99)	Encodes a putative transcription factor (MYB99).	O.I.	C.G.	H.G.
23.3	99.6	36.2	At1g23570	838967	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
22.3	99.6	71.9	At3g18850	821418	LPAT5	F:acyltransferase activity;P:metabolic process;C:unknown;MBOFPV	O.I.	C.G.	H.G.
20.8	99.6	333.8	At2g20870	816620	cell wall protein precursor, putative	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPMF	O.I.	C.G.	H.G.
20.8	99.6	73.4	At1g69120	843244	AP1 (APETALA1)	Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.	O.I.	C.G.	H.G.
20.4	99.6	40.5	At1g28375	839734	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
20.2	99.6	67.9	At3g16500	820898	PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1)	phytochrome-associated protein 1 (PAP1)	O.I.	C.G.	H.G.
19.0	99.5	12.6	At1g26710	839212	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
18.9	99.5	20.8	At1g13150	837873	CYP86C4	member of CYP86C	O.I.	C.G.	H.G.
18.9	99.5	17.5	At1g75790	843912	sks18 (SKU5 Similar 18)	F:pectinesterase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA	O.I.	C.G.	H.G.
18.6	99.5	13.8	At1g26310	839172	CAL (CAULIFLOWER)	Floral homeotic gene encoding a MADS domain protein homologous to AP1. Enhances the flower to shoot transformation in ap1 mutants.	O.I.	C.G.	H.G.
18.1	99.5	47.5	At3g42960	823352	ATA1 (ARABIDOPSIS TAPETUM 1)	Arabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.	O.I.	C.G.	H.G.
18.1	99.5	30.4	At5g13380	831179	auxin-responsive GH3 family protein	F:unknown;P:response to auxin stimulus;C:cellular_component unknown;OBPMF	O.I.	C.G.	H.G.
18.0	99.5	58.7	At4g35420	829695	dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family	F:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAV	O.I.	C.G.	H.G.
17.8	99.5	10.6	At5g49070	834966	KCS21 (3-KETOACYL-COA SYNTHASE 21)	Encodes KCS21, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
17.5	99.5	100.6	At1g75930	843926	EXL6	member of Lipase proteins	O.I.	C.G.	H.G.
17.0	99.5	208.7	At5g33370	833315	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
17.0	99.5	65.1	At4g33790	829521	CER4 (ECERIFERUM 4)	Encodes an alcohol-forming fatty acyl-CoA reductase, involved in cuticular wax biosynthesis. Lines carrying recessive mutations are deficient in primary alcohol and have glossy stem surfaces.	O.I.	C.G.	H.G.
16.6	99.5	11.3	At1g06990	837209	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
16.4	99.5	102.7	At1g47980	841216	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PB	O.I.	C.G.	H.G.
16.4	99.5	64.5	At5g44400	834466	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:cell wall;BFOPAM	O.I.	C.G.	H.G.
16.3	99.5	29.6	At5g07520	830645	GRP18 (GLYCINE-RICH PROTEIN 18)	encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12).	O.I.	C.G.	H.G.
16.1	99.5	143.8	At2g21130	816648	peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase	F:peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:plasma membrane;OBMFPAV	O.I.	C.G.	H.G.
15.9	99.5	14.3	At1g23600	838970	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
15.5	99.5	84.1	At2g22980	816829	serine-type carboxypeptidase	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO	O.I.	C.G.	H.G.
15.5	99.5	44.4	At4g34850	829637	chalcone and stilbene synthase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOF	O.I.	C.G.	H.G.
15.3	99.4	26.6	At5g65205	836644	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
15.2	99.4	15.6	At1g71160	843456	KCS7 (3-KETOACYL-COA SYNTHASE 7)	Encodes KCS7, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
14.7	99.4	37.9	At1g76470	843980	3-beta-hydroxy-delta5-steroid dehydrogenase/ binding / catalytic/ cinnamoyl-CoA reductase	F:3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, steroid biosynthetic process, metabolic process;C:endomembrane system;OBPFMAV	O.I.	C.G.	H.G.
14.6	99.4	325.1	At5g59310	836050	LTP4 (LIPID TRANSFER PROTEIN 4)	Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.	O.I.	C.G.	H.G.
14.6	99.4	7.7	At5g14980	831350	esterase/lipase/thioesterase family protein	F:catalytic activity;P:unknown;C:unknown;BOPMFVA	O.I.	C.G.	H.G.
14.5	99.4	151.9	At5g22430	832304	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
14.1	99.4	13.3	At3g30460	822758	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVB	O.I.	C.G.	H.G.
13.9	99.4	30.3	At1g75920	843925	family II extracellular lipase 5 (EXL5)	F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM	O.I.	C.G.	H.G.
13.9	99.4	14.4	At5g25390	832611	SHN2 (shine2)	encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.	O.I.	C.G.	H.G.
13.8	99.4	10.0	At2g31900	817748	XIF	Encodes an novel myosin isoform.	O.I.	C.G.	H.G.
13.7	99.4	24.1	At4g19240	827664	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
13.5	99.4	166.5	At4g04460	825776	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis, lipid metabolic process;C:endomembrane system;MFOPB	O.I.	C.G.	H.G.
13.0	99.4	14.3	At1g32780	840172	alcohol dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:unknown;BOPFMAV	O.I.	C.G.	H.G.
12.8	99.3	20.1	At4g22160	828305	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
12.6	99.3	39.5	At3g57810	824950	OTU-like cysteine protease family protein	F:cysteine-type peptidase activity;P:biological_process unknown;C:unknown;MPOF	O.I.	C.G.	H.G.
12.5	99.3	15.8	At1g69080	843240	universal stress protein (USP) family protein	F:molecular_function unknown;P:response to stress;C:unknown;PM	O.I.	C.G.	H.G.
12.3	99.3	42.3	At4g21650	828252	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:plant-type cell wall;BPOFAM	O.I.	C.G.	H.G.
12.3	99.3	12.3	At3g48550	824014	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
12.2	99.3	45.3	At3g07450	819933	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
12.2	99.3	23.4	At4g29980	829121	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
11.9	99.3	33.8	At3g11980	820372	MS2 (MALE STERILITY 2)	Similar to fatty acid reductases.	O.I.	C.G.	H.G.
11.9	99.3	11.1	At4g28090	828925	sks10 (SKU5 Similar 10)	F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA	O.I.	C.G.	H.G.
11.8	99.3	29.4	At3g44070	823525	beta-galactosidase	F:beta-galactosidase activity;P:carbohydrate metabolic process;C:beta-galactosidase complex;P	O.I.	C.G.	H.G.

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GSM ID	GSM133752
Assay name	Turner_A-6-Turne-WT-Top2_SLD
GSE experiment	GSE5729: Role of COV in vascular patterning

Microarray experiments to specifically-expressed genes

GSM ID GSM133752 Assay name Turner_A-6-Turne-WT-Top2_SLD GSE experiment GSE5729: Role of COV in vascular patterning

GSM ID GSM133752

Assay name Turner_A-6-Turne-WT-Top2_SLD

GSE experiment GSE5729: Role of COV in vascular patterning