CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133722

Assay name Deeken_A-2-Deeke-Inf_SLD_REP2

GSE experiment GSE5725: Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
325.3 100.0 87.6 At2g37900 818366 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;BPMOF O.I. C.G. H.G.
130.8 99.9 347.5 At2g47180 819331 AtGolS1 (Arabidopsis thaliana galactinol synthase 1) F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:response to high light intensity, response to hydrogen peroxide, carbohydrate biosynthetic process, response to heat;C:cellular_component unknown;PMFVBO O.I. C.G. H.G.
75.3 99.9 333.7 At1g53540 841789 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM O.I. C.G. H.G.
75.3 99.9 18.1 At3g43930 823509 - F:molecular_function unknown;P:biological_process unknown;C:intracellular;MFPO O.I. C.G. H.G.
74.7 99.9 368.7 At1g07400 837252 17.8 kDa class I heat shock protein (HSP17.8-CI) F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM O.I. C.G. H.G.
74.2 99.9 60.2 At3g10450 820209 SCPL7 (SERINE CARBOXYPEPTIDASE-LIKE 7) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO O.I. C.G. H.G.
71.8 99.9 299.8 At5g48570 834913 peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding;P:protein folding;C:vacuole;BMOFPA O.I. C.G. H.G.
71.3 99.9 12.9 At1g63190 842623 - F:molecular_function unknown;P:unknown;C:cellular_component unknown;P O.I. C.G. H.G.
70.7 99.9 229.0 At2g19310 816448 - F:molecular_function unknown;P:response to oxidative stress, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;PFO O.I. C.G. H.G.
70.2 99.9 98.7 At5g19875 832109 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;P O.I. C.G. H.G.
62.6 99.8 17.8 At1g52810 841714 2-oxoglutarate-dependent dioxygenase-related F:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFM O.I. C.G. H.G.
60.8 99.8 127.4 At5g53870 835468 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:plasma membrane, anchored to membrane;MFOBPVA O.I. C.G. H.G.
59.4 99.8 165.8 At1g56600 842114 AtGolS2 (Arabidopsis thaliana galactinol synthase 2) F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBO O.I. C.G. H.G.
58.9 99.8 72.9 At2g35820 818155 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPO O.I. C.G. H.G.
56.2 99.8 54.4 At1g61810 842478 BGLU45 (BETA-GLUCOSIDASE 45) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA O.I. C.G. H.G.
54.5 99.8 192.6 At4g25200 828623 ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6) AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrial O.I. C.G. H.G.
52.6 99.8 22.5 At1g59670 842257 ATGSTU15 (GLUTATHIONE S-TRANSFERASE TAU 15) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
50.8 99.8 47.9 At5g03190 831909 CPUORF47 (CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 47) F:molecular_function unknown;P:biological_process unknown;C:unknown;POB O.I. C.G. H.G.
48.0 99.8 270.6 At2g29500 817499 17.6 kDa class I small heat shock protein (HSP17.6B-CI) F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM O.I. C.G. H.G.
46.7 99.8 84.1 At4g37430 829897 CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2) Encodes a member of the CYP81F cytochrome P450 monooxygenase subfamily. O.I. C.G. H.G.
46.3 99.8 578.6 At5g59310 836050 LTP4 (LIPID TRANSFER PROTEIN 4) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. O.I. C.G. H.G.
44.7 99.8 505.5 At3g12580 820438 HSP70 (heat shock protein 70) F:ATP binding;P:in 8 processes;C:cytosol, mitochondrion, cell wall, plasma membrane;OBMFPVA O.I. C.G. H.G.
44.7 99.8 287.3 At5g12030 831076 AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A) Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development. O.I. C.G. H.G.
43.6 99.8 331.1 At3g46230 823768 ATHSP17.4 member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds O.I. C.G. H.G.
42.2 99.8 337.0 At5g52640 835341 ATHSP90.1 (HEAT SHOCK PROTEIN 90.1) Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. O.I. C.G. H.G.
41.7 99.8 11.6 At1g68270 843156 AMP-dependent synthetase and ligase family protein F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
41.1 99.8 68.1 At1g80170 844357 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:plant-type cell wall;FPBOMA O.I. C.G. H.G.
38.6 99.8 118.1 At1g09140 837433 SF2/ASF-like splicing modulator (SRP30) Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed. O.I. C.G. H.G.
38.2 99.8 121.4 At1g78490 844185 CYP708A3 member of CYP708A O.I. C.G. H.G.
38.1 99.8 141.4 At3g21710 821725 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
37.3 99.7 143.1 At2g32120 817771 HSP70T-2 (HEAT-SHOCK PROTEIN 70T-2) F:ATP binding;P:protein folding, response to high light intensity, response to hydrogen peroxide, response to heat;C:cellular_component unknown;OBMFPAV O.I. C.G. H.G.
37.0 99.7 96.7 At1g20160 838606 ATSBT5.2 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOFMA O.I. C.G. H.G.
36.8 99.7 126.2 At3g61890 825362 ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems. O.I. C.G. H.G.
35.8 99.7 220.2 At1g16030 838174 Hsp70b (heat shock protein 70B) F:ATP binding;P:protein folding, response to heat;C:cytosol, cell wall, plasma membrane, chloroplast, membrane;BOMFPVA O.I. C.G. H.G.
34.3 99.7 59.7 At3g20100 821553 CYP705A19 member of CYP705A O.I. C.G. H.G.
34.1 99.7 8.8 At3g56700 824837 FAR6 (FATTY ACID REDUCTASE 6) F:fatty acyl-CoA reductase (alcohol-forming) activity, oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;P:microsporogenesis, metabolic process;C:chloroplast;MBFOP O.I. C.G. H.G.
33.1 99.7 110.3 At5g61510 836272 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:cell differentiation, response to high light intensity;C:unknown;BOFMPAV O.I. C.G. H.G.
32.1 99.7 197.0 At1g74310 843771 ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101) Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature. O.I. C.G. H.G.
31.7 99.7 179.9 At1g54050 841843 17.4 kDa class III heat shock protein (HSP17.4-CIII) F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM O.I. C.G. H.G.
31.5 99.7 7.6 At1g67000 843018 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
31.1 99.7 153.0 At5g12020 831075 HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM O.I. C.G. H.G.
30.9 99.7 238.0 At3g24500 822041 MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C) One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses. O.I. C.G. H.G.
30.6 99.7 27.6 At4g30110 829134 HMA2 encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc O.I. C.G. H.G.
30.0 99.7 246.1 At3g17790 821047 PAP17 F:phosphatase activity, protein serine/threonine phosphatase activity, acid phosphatase activity;P:response to hydrogen peroxide, cellular phosphate ion homeostasis;C:cell surface;MOBPFA O.I. C.G. H.G.
29.9 99.7 69.0 At4g37150 829869 MES9 (METHYL ESTERASE 9) Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES9 appears to be involved in MeSA hydrolysis in planta. Expression of MES9 can restore systemic acquired resistance in SAR-deficient tobacco plants. This protein does not act on MeGA4, or MEGA9 in vitro. O.I. C.G. H.G.
29.8 99.7 51.6 At5g03200 831908 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:unknown;MOPVF O.I. C.G. H.G.
29.7 99.7 139.6 At5g25450 832619 ubiquinol-cytochrome C reductase complex 14 kDa protein, putative F:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, mitochondrial respiratory chain complex III, membrane;MPFO O.I. C.G. H.G.
29.7 99.7 41.9 At5g10930 830960 CIPK5 (CBL-INTERACTING PROTEIN KINASE 5) Encodes CBL-interacting protein kinase 5 (CIPK5). O.I. C.G. H.G.
28.8 99.7 107.9 At1g52560 841687 26.5 kDa class I small heat shock protein-like (HSP26.5-P) F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:mitochondrion;BPOFAMV O.I. C.G. H.G.
28.6 99.7 94.1 At3g05690 819738 NF-YA2 (NUCLEAR FACTOR Y, SUBUNIT A2) Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. O.I. C.G. H.G.
28.5 99.7 64.4 At3g14280 820648 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
27.7 99.7 101.2 At2g20560 816578 DNAJ heat shock family protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAV O.I. C.G. H.G.
27.3 99.7 77.3 At4g10380 826630 NIP5 Essential for efficient Boron uptake and plant development under boron limitation. Also functions in arsenite transport and tolerance. O.I. C.G. H.G.
26.3 99.7 21.7 At5g37500 833728 GORK (GATED OUTWARDLY-RECTIFYING K+ CHANNEL) encodes a guard cell outward potassium channel. Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold. O.I. C.G. H.G.
25.7 99.7 32.3 At3g57540 824921 remorin family protein F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
25.4 99.6 125.0 At5g49630 835025 AAP6 (AMINO ACID PERMEASE 6) Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem. O.I. C.G. H.G.
25.3 99.6 66.8 At4g30460 829169 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA O.I. C.G. H.G.
25.2 99.6 93.5 At4g27670 828881 HSP21 (HEAT SHOCK PROTEIN 21) chloroplast located small heat shock protein. O.I. C.G. H.G.
24.8 99.6 34.4 At1g11080 837649 scpl31 (serine carboxypeptidase-like 31) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
24.2 99.6 81.6 At2g39330 818518 JAL23 (JACALIN-RELATED LECTIN 23) F:molecular_function unknown;P:biological_process unknown;C:vacuole;POF O.I. C.G. H.G.
23.3 99.6 15.0 At5g06510 830539 NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10) F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:CCAAT-binding factor complex, nucleus;PMFO O.I. C.G. H.G.
23.0 99.6 197.4 At1g67360 843057 rubber elongation factor (REF) family protein F:unknown;P:biological_process unknown;C:vacuole;P O.I. C.G. H.G.
23.0 99.6 123.3 At4g10250 826616 ATHSP22.0 Columbia endomembrane-localized small heat shock protein O.I. C.G. H.G.
22.9 99.6 61.5 At2g31110 817667 unknown protein F:unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
22.9 99.6 47.6 At5g36940 833664 CAT3 (CATIONIC AMINO ACID TRANSPORTER 3) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. O.I. C.G. H.G.
22.7 99.6 8.3 At1g35750 840480 APUM10 (Arabidopsis Pumilio 10) F:RNA binding, binding;P:biological_process unknown;C:cellular_component unknown;FMOP O.I. C.G. H.G.
21.9 99.6 141.6 At5g07460 830637 PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2) ubiquitous enzyme that repairs oxidatively damaged proteins. Methionine sulfoxide reductase activity. Mutant lacking reductase activity showed increased protein oxidation, nitration and glycation of specific amino acid residues during darkness. O.I. C.G. H.G.
21.8 99.6 76.2 At5g16570 831519 GLN1 Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium O.I. C.G. H.G.
21.0 99.6 66.5 At4g11960 826803 PGRL1B (PGR5-Like B) Encodes PGRL1B, a transmembrane protein present in thylakoids. PGRL1B has a highly homologous isoform PGRL1A encoded by At4g22890. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I). O.I. C.G. H.G.
20.9 99.6 29.6 At2g38640 818446 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
20.8 99.6 83.4 At1g25530 839139 lysine and histidine specific transporter, putative F:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;PMFOBA O.I. C.G. H.G.
20.4 99.6 35.1 At4g24000 828500 ATCSLG2 encodes a protein similar to cellulose synthase O.I. C.G. H.G.
20.1 99.6 50.3 At5g02030 831745 RPL (REPLUMLESS) Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP. O.I. C.G. H.G.
19.9 99.6 49.1 At1g65480 842859 FT (FLOWERING LOCUS T) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1. O.I. C.G. H.G.
19.8 99.6 57.5 At5g38710 833862 proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putative F:proline dehydrogenase activity;P:proline catabolic process, glutamate biosynthetic process;C:unknown;BOMFPVA O.I. C.G. H.G.
19.4 99.6 448.6 At5g59320 836051 LTP3 (LIPID TRANSFER PROTEIN 3) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. O.I. C.G. H.G.
19.4 99.6 81.9 At4g09760 826564 choline kinase, putative encodes a choline synthase whose gene expression is induced by high salt and mannitol. O.I. C.G. H.G.
19.2 99.6 52.7 At2g47160 819329 BOR1 (REQUIRES HIGH BORON 1) Boron transporter. Protein accumulates in shoots and roots under conditions of boron deficiency and is degraded within several hours of restoring boron supply. Localized to the plasma membrane under B limitation, and to the cytoplasm after B application before degradation. Protein is transferred via the endosomes to the vacuole for degradation. O.I. C.G. H.G.
19.0 99.5 19.6 At2g44745 819083 WRKY family transcription factor F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PO O.I. C.G. H.G.
18.9 99.5 18.9 At4g35290 829682 GLUR2 (GLUTAMATE RECEPTOR 2) Encodes a putative glutamate receptor like-protein, member of Putative ligand-gated ion channel subunit family O.I. C.G. H.G.
18.7 99.5 34.6 At4g29820 829104 CFIM-25 Encodes a homolog of the protein CFI-25, a polyadenylation factor subunit. O.I. C.G. H.G.
18.4 99.5 191.9 At3g07090 819895 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF O.I. C.G. H.G.
18.4 99.5 65.7 At3g59010 825070 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
17.9 99.5 29.4 At4g23493 828448 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
17.8 99.5 241.2 At2g26020 817143 PDF1.2b (plant defensin 1.2b) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. O.I. C.G. H.G.
17.8 99.5 28.2 At4g28530 828971 anac074 (Arabidopsis NAC domain containing protein 74) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P O.I. C.G. H.G.
17.6 99.5 113.0 At5g58590 835973 RANBP1 (RAN BINDING PROTEIN 1) Encodes a Ran-binding protein 1 homolog (RanBP1). O.I. C.G. H.G.
17.6 99.5 56.2 At1g78780 844214 pathogenesis-related family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFM O.I. C.G. H.G.
17.6 99.5 40.7 At2g29320 817481 tropinone reductase, putative / tropine dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
17.4 99.5 51.7 At3g26960 822314 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
17.3 99.5 63.4 At4g33040 829441 glutaredoxin family protein F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:cellular_component unknown;PMFOB O.I. C.G. H.G.
17.2 99.5 93.5 At4g38060 829962 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
17.1 99.5 216.8 At2g33380 817901 RD20 (RESPONSIVE TO DESSICATION 20) Encodes a calcium binding protein whose mRNA is induced upon treatment with NaCl, ABA and in response to dessication. mRNA expression under drought conditions is apparent particularly in leaves and flowers. O.I. C.G. H.G.
17.0 99.5 76.8 At3g60690 825240 auxin-responsive family protein F:unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
17.0 99.5 13.5 At2g35700 818139 ERF38 (ERF FAMILY PROTEIN 38) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Thought to be involved in secondary cell wall metabolism. O.I. C.G. H.G.
16.9 99.5 135.6 At1g07350 837246 transformer serine/arginine-rich ribonucleoprotein, putative F:RNA binding, nucleotide binding, nucleic acid binding;P:RNA splicing;C:unknown;MPFOBVA O.I. C.G. H.G.
16.9 99.5 43.4 At1g14370 837999 APK2A (PROTEIN KINASE 2A) Encodes protein kinase APK2a. O.I. C.G. H.G.
16.8 99.5 56.3 At1g49320 841355 BURP domain-containing protein F:molecular_function unknown;P:unknown;C:endomembrane system;P O.I. C.G. H.G.
16.7 99.5 80.8 At2g29350 817484 SAG13 senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenase O.I. C.G. H.G.
16.7 99.5 37.4 At3g21890 821744 zinc finger (B-box type) family protein F:transcription factor activity, zinc ion binding;P:response to UV-B, regulation of transcription;C:intracellular;PO O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
325.3	100.0	87.6	At2g37900	818366	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;BPMOF	O.I.	C.G.	H.G.
130.8	99.9	347.5	At2g47180	819331	AtGolS1 (Arabidopsis thaliana galactinol synthase 1)	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:response to high light intensity, response to hydrogen peroxide, carbohydrate biosynthetic process, response to heat;C:cellular_component unknown;PMFVBO	O.I.	C.G.	H.G.
75.3	99.9	333.7	At1g53540	841789	17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)	F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM	O.I.	C.G.	H.G.
75.3	99.9	18.1	At3g43930	823509	-	F:molecular_function unknown;P:biological_process unknown;C:intracellular;MFPO	O.I.	C.G.	H.G.
74.7	99.9	368.7	At1g07400	837252	17.8 kDa class I heat shock protein (HSP17.8-CI)	F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAM	O.I.	C.G.	H.G.
74.2	99.9	60.2	At3g10450	820209	SCPL7 (SERINE CARBOXYPEPTIDASE-LIKE 7)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO	O.I.	C.G.	H.G.
71.8	99.9	299.8	At5g48570	834913	peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putative	F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding;P:protein folding;C:vacuole;BMOFPA	O.I.	C.G.	H.G.
71.3	99.9	12.9	At1g63190	842623	-	F:molecular_function unknown;P:unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
70.7	99.9	229.0	At2g19310	816448	-	F:molecular_function unknown;P:response to oxidative stress, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;PFO	O.I.	C.G.	H.G.
70.2	99.9	98.7	At5g19875	832109	unknown protein	F:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;P	O.I.	C.G.	H.G.
62.6	99.8	17.8	At1g52810	841714	2-oxoglutarate-dependent dioxygenase-related	F:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
60.8	99.8	127.4	At5g53870	835468	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:plasma membrane, anchored to membrane;MFOBPVA	O.I.	C.G.	H.G.
59.4	99.8	165.8	At1g56600	842114	AtGolS2 (Arabidopsis thaliana galactinol synthase 2)	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBO	O.I.	C.G.	H.G.
58.9	99.8	72.9	At2g35820	818155	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPO	O.I.	C.G.	H.G.
56.2	99.8	54.4	At1g61810	842478	BGLU45 (BETA-GLUCOSIDASE 45)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA	O.I.	C.G.	H.G.
54.5	99.8	192.6	At4g25200	828623	ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)	AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrial	O.I.	C.G.	H.G.
52.6	99.8	22.5	At1g59670	842257	ATGSTU15 (GLUTATHIONE S-TRANSFERASE TAU 15)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
50.8	99.8	47.9	At5g03190	831909	CPUORF47 (CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 47)	F:molecular_function unknown;P:biological_process unknown;C:unknown;POB	O.I.	C.G.	H.G.
48.0	99.8	270.6	At2g29500	817499	17.6 kDa class I small heat shock protein (HSP17.6B-CI)	F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM	O.I.	C.G.	H.G.
46.7	99.8	84.1	At4g37430	829897	CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2)	Encodes a member of the CYP81F cytochrome P450 monooxygenase subfamily.	O.I.	C.G.	H.G.
46.3	99.8	578.6	At5g59310	836050	LTP4 (LIPID TRANSFER PROTEIN 4)	Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.	O.I.	C.G.	H.G.
44.7	99.8	505.5	At3g12580	820438	HSP70 (heat shock protein 70)	F:ATP binding;P:in 8 processes;C:cytosol, mitochondrion, cell wall, plasma membrane;OBMFPVA	O.I.	C.G.	H.G.
44.7	99.8	287.3	At5g12030	831076	AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)	Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.	O.I.	C.G.	H.G.
43.6	99.8	331.1	At3g46230	823768	ATHSP17.4	member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds	O.I.	C.G.	H.G.
42.2	99.8	337.0	At5g52640	835341	ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)	Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.	O.I.	C.G.	H.G.
41.7	99.8	11.6	At1g68270	843156	AMP-dependent synthetase and ligase family protein	F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
41.1	99.8	68.1	At1g80170	844357	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:plant-type cell wall;FPBOMA	O.I.	C.G.	H.G.
38.6	99.8	118.1	At1g09140	837433	SF2/ASF-like splicing modulator (SRP30)	Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed.	O.I.	C.G.	H.G.
38.2	99.8	121.4	At1g78490	844185	CYP708A3	member of CYP708A	O.I.	C.G.	H.G.
38.1	99.8	141.4	At3g21710	821725	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
37.3	99.7	143.1	At2g32120	817771	HSP70T-2 (HEAT-SHOCK PROTEIN 70T-2)	F:ATP binding;P:protein folding, response to high light intensity, response to hydrogen peroxide, response to heat;C:cellular_component unknown;OBMFPAV	O.I.	C.G.	H.G.
37.0	99.7	96.7	At1g20160	838606	ATSBT5.2	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOFMA	O.I.	C.G.	H.G.
36.8	99.7	126.2	At3g61890	825362	ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems.	O.I.	C.G.	H.G.
35.8	99.7	220.2	At1g16030	838174	Hsp70b (heat shock protein 70B)	F:ATP binding;P:protein folding, response to heat;C:cytosol, cell wall, plasma membrane, chloroplast, membrane;BOMFPVA	O.I.	C.G.	H.G.
34.3	99.7	59.7	At3g20100	821553	CYP705A19	member of CYP705A	O.I.	C.G.	H.G.
34.1	99.7	8.8	At3g56700	824837	FAR6 (FATTY ACID REDUCTASE 6)	F:fatty acyl-CoA reductase (alcohol-forming) activity, oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;P:microsporogenesis, metabolic process;C:chloroplast;MBFOP	O.I.	C.G.	H.G.
33.1	99.7	110.3	At5g61510	836272	NADP-dependent oxidoreductase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:cell differentiation, response to high light intensity;C:unknown;BOFMPAV	O.I.	C.G.	H.G.
32.1	99.7	197.0	At1g74310	843771	ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101)	Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.	O.I.	C.G.	H.G.
31.7	99.7	179.9	At1g54050	841843	17.4 kDa class III heat shock protein (HSP17.4-CIII)	F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAM	O.I.	C.G.	H.G.
31.5	99.7	7.6	At1g67000	843018	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
31.1	99.7	153.0	At5g12020	831075	HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)	F:unknown;P:response to heat;C:cellular_component unknown;BPOFAM	O.I.	C.G.	H.G.
30.9	99.7	238.0	At3g24500	822041	MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C)	One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses.	O.I.	C.G.	H.G.
30.6	99.7	27.6	At4g30110	829134	HMA2	encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc	O.I.	C.G.	H.G.
30.0	99.7	246.1	At3g17790	821047	PAP17	F:phosphatase activity, protein serine/threonine phosphatase activity, acid phosphatase activity;P:response to hydrogen peroxide, cellular phosphate ion homeostasis;C:cell surface;MOBPFA	O.I.	C.G.	H.G.
29.9	99.7	69.0	At4g37150	829869	MES9 (METHYL ESTERASE 9)	Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES9 appears to be involved in MeSA hydrolysis in planta. Expression of MES9 can restore systemic acquired resistance in SAR-deficient tobacco plants. This protein does not act on MeGA4, or MEGA9 in vitro.	O.I.	C.G.	H.G.
29.8	99.7	51.6	At5g03200	831908	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:N-terminal protein myristoylation;C:unknown;MOPVF	O.I.	C.G.	H.G.
29.7	99.7	139.6	At5g25450	832619	ubiquinol-cytochrome C reductase complex 14 kDa protein, putative	F:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, mitochondrial respiratory chain complex III, membrane;MPFO	O.I.	C.G.	H.G.
29.7	99.7	41.9	At5g10930	830960	CIPK5 (CBL-INTERACTING PROTEIN KINASE 5)	Encodes CBL-interacting protein kinase 5 (CIPK5).	O.I.	C.G.	H.G.
28.8	99.7	107.9	At1g52560	841687	26.5 kDa class I small heat shock protein-like (HSP26.5-P)	F:molecular_function unknown;P:response to high light intensity, response to hydrogen peroxide, response to heat;C:mitochondrion;BPOFAMV	O.I.	C.G.	H.G.
28.6	99.7	94.1	At3g05690	819738	NF-YA2 (NUCLEAR FACTOR Y, SUBUNIT A2)	Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.	O.I.	C.G.	H.G.
28.5	99.7	64.4	At3g14280	820648	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
27.7	99.7	101.2	At2g20560	816578	DNAJ heat shock family protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAV	O.I.	C.G.	H.G.
27.3	99.7	77.3	At4g10380	826630	NIP5	Essential for efficient Boron uptake and plant development under boron limitation. Also functions in arsenite transport and tolerance.	O.I.	C.G.	H.G.
26.3	99.7	21.7	At5g37500	833728	GORK (GATED OUTWARDLY-RECTIFYING K+ CHANNEL)	encodes a guard cell outward potassium channel. Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold.	O.I.	C.G.	H.G.
25.7	99.7	32.3	At3g57540	824921	remorin family protein	F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
25.4	99.6	125.0	At5g49630	835025	AAP6 (AMINO ACID PERMEASE 6)	Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.	O.I.	C.G.	H.G.
25.3	99.6	66.8	At4g30460	829169	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA	O.I.	C.G.	H.G.
25.2	99.6	93.5	At4g27670	828881	HSP21 (HEAT SHOCK PROTEIN 21)	chloroplast located small heat shock protein.	O.I.	C.G.	H.G.
24.8	99.6	34.4	At1g11080	837649	scpl31 (serine carboxypeptidase-like 31)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
24.2	99.6	81.6	At2g39330	818518	JAL23 (JACALIN-RELATED LECTIN 23)	F:molecular_function unknown;P:biological_process unknown;C:vacuole;POF	O.I.	C.G.	H.G.
23.3	99.6	15.0	At5g06510	830539	NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10)	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:CCAAT-binding factor complex, nucleus;PMFO	O.I.	C.G.	H.G.
23.0	99.6	197.4	At1g67360	843057	rubber elongation factor (REF) family protein	F:unknown;P:biological_process unknown;C:vacuole;P	O.I.	C.G.	H.G.
23.0	99.6	123.3	At4g10250	826616	ATHSP22.0	Columbia endomembrane-localized small heat shock protein	O.I.	C.G.	H.G.
22.9	99.6	61.5	At2g31110	817667	unknown protein	F:unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
22.9	99.6	47.6	At5g36940	833664	CAT3 (CATIONIC AMINO ACID TRANSPORTER 3)	Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs.	O.I.	C.G.	H.G.
22.7	99.6	8.3	At1g35750	840480	APUM10 (Arabidopsis Pumilio 10)	F:RNA binding, binding;P:biological_process unknown;C:cellular_component unknown;FMOP	O.I.	C.G.	H.G.
21.9	99.6	141.6	At5g07460	830637	PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)	ubiquitous enzyme that repairs oxidatively damaged proteins. Methionine sulfoxide reductase activity. Mutant lacking reductase activity showed increased protein oxidation, nitration and glycation of specific amino acid residues during darkness.	O.I.	C.G.	H.G.
21.8	99.6	76.2	At5g16570	831519	GLN1	Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium	O.I.	C.G.	H.G.
21.0	99.6	66.5	At4g11960	826803	PGRL1B (PGR5-Like B)	Encodes PGRL1B, a transmembrane protein present in thylakoids. PGRL1B has a highly homologous isoform PGRL1A encoded by At4g22890. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I).	O.I.	C.G.	H.G.
20.9	99.6	29.6	At2g38640	818446	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
20.8	99.6	83.4	At1g25530	839139	lysine and histidine specific transporter, putative	F:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;PMFOBA	O.I.	C.G.	H.G.
20.4	99.6	35.1	At4g24000	828500	ATCSLG2	encodes a protein similar to cellulose synthase	O.I.	C.G.	H.G.
20.1	99.6	50.3	At5g02030	831745	RPL (REPLUMLESS)	Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.	O.I.	C.G.	H.G.
19.9	99.6	49.1	At1g65480	842859	FT (FLOWERING LOCUS T)	FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.	O.I.	C.G.	H.G.
19.8	99.6	57.5	At5g38710	833862	proline oxidase, putative / osmotic stress-responsive proline dehydrogenase, putative	F:proline dehydrogenase activity;P:proline catabolic process, glutamate biosynthetic process;C:unknown;BOMFPVA	O.I.	C.G.	H.G.
19.4	99.6	448.6	At5g59320	836051	LTP3 (LIPID TRANSFER PROTEIN 3)	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.	O.I.	C.G.	H.G.
19.4	99.6	81.9	At4g09760	826564	choline kinase, putative	encodes a choline synthase whose gene expression is induced by high salt and mannitol.	O.I.	C.G.	H.G.
19.2	99.6	52.7	At2g47160	819329	BOR1 (REQUIRES HIGH BORON 1)	Boron transporter. Protein accumulates in shoots and roots under conditions of boron deficiency and is degraded within several hours of restoring boron supply. Localized to the plasma membrane under B limitation, and to the cytoplasm after B application before degradation. Protein is transferred via the endosomes to the vacuole for degradation.	O.I.	C.G.	H.G.
19.0	99.5	19.6	At2g44745	819083	WRKY family transcription factor	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PO	O.I.	C.G.	H.G.
18.9	99.5	18.9	At4g35290	829682	GLUR2 (GLUTAMATE RECEPTOR 2)	Encodes a putative glutamate receptor like-protein, member of Putative ligand-gated ion channel subunit family	O.I.	C.G.	H.G.
18.7	99.5	34.6	At4g29820	829104	CFIM-25	Encodes a homolog of the protein CFI-25, a polyadenylation factor subunit.	O.I.	C.G.	H.G.
18.4	99.5	191.9	At3g07090	819895	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF	O.I.	C.G.	H.G.
18.4	99.5	65.7	At3g59010	825070	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
17.9	99.5	29.4	At4g23493	828448	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
17.8	99.5	241.2	At2g26020	817143	PDF1.2b (plant defensin 1.2b)	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.	O.I.	C.G.	H.G.
17.8	99.5	28.2	At4g28530	828971	anac074 (Arabidopsis NAC domain containing protein 74)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P	O.I.	C.G.	H.G.
17.6	99.5	113.0	At5g58590	835973	RANBP1 (RAN BINDING PROTEIN 1)	Encodes a Ran-binding protein 1 homolog (RanBP1).	O.I.	C.G.	H.G.
17.6	99.5	56.2	At1g78780	844214	pathogenesis-related family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBFM	O.I.	C.G.	H.G.
17.6	99.5	40.7	At2g29320	817481	tropinone reductase, putative / tropine dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
17.4	99.5	51.7	At3g26960	822314	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
17.3	99.5	63.4	At4g33040	829441	glutaredoxin family protein	F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:cellular_component unknown;PMFOB	O.I.	C.G.	H.G.
17.2	99.5	93.5	At4g38060	829962	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
17.1	99.5	216.8	At2g33380	817901	RD20 (RESPONSIVE TO DESSICATION 20)	Encodes a calcium binding protein whose mRNA is induced upon treatment with NaCl, ABA and in response to dessication. mRNA expression under drought conditions is apparent particularly in leaves and flowers.	O.I.	C.G.	H.G.
17.0	99.5	76.8	At3g60690	825240	auxin-responsive family protein	F:unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
17.0	99.5	13.5	At2g35700	818139	ERF38 (ERF FAMILY PROTEIN 38)	encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Thought to be involved in secondary cell wall metabolism.	O.I.	C.G.	H.G.
16.9	99.5	135.6	At1g07350	837246	transformer serine/arginine-rich ribonucleoprotein, putative	F:RNA binding, nucleotide binding, nucleic acid binding;P:RNA splicing;C:unknown;MPFOBVA	O.I.	C.G.	H.G.
16.9	99.5	43.4	At1g14370	837999	APK2A (PROTEIN KINASE 2A)	Encodes protein kinase APK2a.	O.I.	C.G.	H.G.
16.8	99.5	56.3	At1g49320	841355	BURP domain-containing protein	F:molecular_function unknown;P:unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
16.7	99.5	80.8	At2g29350	817484	SAG13	senescence-associated gene SAG13 encoding a short-chain alcohol dehydrogenase	O.I.	C.G.	H.G.
16.7	99.5	37.4	At3g21890	821744	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:response to UV-B, regulation of transcription;C:intracellular;PO	O.I.	C.G.	H.G.

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GSM ID	GSM133722
Assay name	Deeken_A-2-Deeke-Inf_SLD_REP2
GSE experiment	GSE5725: Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana

Microarray experiments to specifically-expressed genes

GSM ID GSM133722 Assay name Deeken_A-2-Deeke-Inf_SLD_REP2 GSE experiment GSE5725: Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana

GSM ID GSM133722

Assay name Deeken_A-2-Deeke-Inf_SLD_REP2

GSE experiment GSE5725: Agrobacterium tumefaciens-induced tumour development of Arabidopsis thaliana