CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133138

Assay name S1500_2H_B

GSE experiment GSE5688: AtGenExpress: Response to sulfate limitation

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
72.7 99.9 69.0 At1g72140 843545 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport, response to nematode;C:plasma membrane, membrane;BPMOF O.I. C.G. H.G.
63.0 99.8 233.4 At3g59930 825163 - Encodes a defensin-like (DEFL) family protein. O.I. C.G. H.G.
59.4 99.8 54.2 At4g18510 827583 CLE2 (CLAVATA3/ESR-RELATED) CLE2, putative ligand, member of large gene family homologous to Clavata3 O.I. C.G. H.G.
58.9 99.8 114.6 At2g32270 817787 ZIP3 A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root. also response to iron deficiency. O.I. C.G. H.G.
56.5 99.8 30.6 At2g19060 816423 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
51.6 99.8 91.5 At5g65280 836653 GCL1 (GCR2-LIKE 1) Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase. O.I. C.G. H.G.
43.3 99.8 87.2 At3g59220 825091 PRN (PIRIN) encodes a cupin-domain containing protein that is similar to pirins which interact with a CCAAT box binding transcription factor. The protein interacts with GPA1 (G protein alpha-subunit) in vitro. Mutants in the gene are affected in germination and early seedling development. O.I. C.G. H.G.
42.3 99.8 342.8 At1g08090 837327 ATNRT2:1 (NITRATE TRANSPORTER 2:1) High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake. O.I. C.G. H.G.
40.1 99.8 290.0 At1g21310 838728 ATEXT3 (EXTENSIN 3) Encodes extensin 3. O.I. C.G. H.G.
38.1 99.8 77.0 At5g06300 830518 carboxy-lyase F:carboxy-lyase activity;P:metabolic process;C:unknown;BOPFMA O.I. C.G. H.G.
37.3 99.7 78.4 At5g25810 832650 tny (TINY) encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family (TINY). The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic or overexpression of this gene in a Ds tagged line has reduced cell expansion. The expression of this gene is induced by ethylene and light and appears to stimulate cytokinin biosynthesis. O.I. C.G. H.G.
36.7 99.7 62.5 At3g01260 821171 aldose 1-epimerase/ carbohydrate binding / catalytic/ isomerase F:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;OBMFPVA O.I. C.G. H.G.
34.2 99.7 14.9 At3g62740 825449 BGLU7 (BETA GLUCOSIDASE 7) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA O.I. C.G. H.G.
32.8 99.7 61.5 At3g16690 820921 nodulin MtN3 family protein F:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMO O.I. C.G. H.G.
32.0 99.7 41.3 At1g30840 839967 ATPUP4 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. O.I. C.G. H.G.
31.2 99.7 20.3 At2g43150 818917 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBFOVA O.I. C.G. H.G.
30.3 99.7 29.4 At1g53920 841830 GLIP5 Contains lipase signature motif and GDSL domain. O.I. C.G. H.G.
30.1 99.7 23.7 At1g58170 842184 disease resistance-responsive protein-related / dirigent protein-related F:molecular_function unknown;P:N-terminal protein myristoylation, lignan biosynthetic process, defense response;C:endomembrane system;P O.I. C.G. H.G.
30.0 99.7 159.2 At5g48430 834898 aspartic-type endopeptidase F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;P O.I. C.G. H.G.
29.4 99.7 34.2 At1g12950 837853 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
29.2 99.7 19.4 At1g77520 844088 O-methyltransferase family 2 protein F:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOM O.I. C.G. H.G.
27.1 99.7 86.9 At3g16800 820933 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:nucleus, cytoplasm;PMOFV O.I. C.G. H.G.
27.1 99.7 69.8 At5g43520 834372 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;POMF O.I. C.G. H.G.
26.8 99.7 120.4 At1g11670 837711 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:N-terminal protein myristoylation, multidrug transport;C:membrane;BOPFAM O.I. C.G. H.G.
26.3 99.7 41.4 At4g35150 829667 O-methyltransferase family 2 protein F:methyltransferase activity, O-methyltransferase activity, protein dimerization activity;P:unknown;C:cytosol;PBFMO O.I. C.G. H.G.
25.9 99.7 65.6 At1g31710 840058 copper amine oxidase, putative F:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA O.I. C.G. H.G.
25.8 99.7 25.8 At1g67110 843031 CYP735A2 member of CYP709A O.I. C.G. H.G.
25.4 99.6 79.4 At3g24290 822017 AMT1 F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPA O.I. C.G. H.G.
25.2 99.6 95.6 At1g13300 837890 myb family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POVBMF O.I. C.G. H.G.
25.0 99.6 42.0 At5g18860 832004 inosine-uridine preferring nucleoside hydrolase family protein F:hydrolase activity;P:biological_process unknown;C:cell wall;BOMPFA O.I. C.G. H.G.
24.5 99.6 68.7 At3g27170 822336 CLC-B (CHLORIDE CHANNEL B) member of Anion channel protein family O.I. C.G. H.G.
24.3 99.6 68.3 At5g60890 836210 MYB34 (MYB DOMAIN PROTEIN 34) Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis. O.I. C.G. H.G.
23.2 99.6 67.7 At2g40900 818687 nodulin MtN21 family protein F:unknown;P:unknown;C:membrane;BOPAM O.I. C.G. H.G.
23.2 99.6 34.4 At5g06570 830545 hydrolase F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
22.7 99.6 40.9 At2g22770 816807 NAI1 regulates the development of ER bodies. also involves in response to the endophytic fungus Piriformospora indica. O.I. C.G. H.G.
21.6 99.6 8.7 At4g25410 828644 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFM O.I. C.G. H.G.
21.4 99.6 31.2 At5g15830 831440 AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POMFB O.I. C.G. H.G.
20.6 99.6 24.2 At1g78120 844148 tetratricopeptide repeat (TPR)-containing protein F:binding;P:unknown;C:mitochondrion;MOBFPA O.I. C.G. H.G.
20.5 99.6 42.1 At3g45700 823712 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PMBOF O.I. C.G. H.G.
20.2 99.6 191.3 At1g35580 840454 CINV1 (cytosolic invertase 1) Encodes a protein with cytosolic (alkaline/neutral) invertase activity. The protein was shown to interact with PIP5K9. O.I. C.G. H.G.
20.2 99.6 52.3 At2g29660 817516 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:anchored to membrane;PFO O.I. C.G. H.G.
20.1 99.6 36.5 At3g50300 824192 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO O.I. C.G. H.G.
19.9 99.6 87.8 At1g75540 843890 STH2 (SALT TOLERANCE HOMOLOG2) F:transcription factor activity, zinc ion binding;P:unknown;C:intracellular;POMF O.I. C.G. H.G.
19.9 99.6 56.4 At3g45710 823713 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMOFA O.I. C.G. H.G.
19.6 99.6 34.5 At1g14780 838043 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
19.5 99.6 22.2 At4g15400 827208 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:unknown;C:cellular_component unknown;PFB O.I. C.G. H.G.
19.1 99.6 329.1 At4g22212 828313 - Encodes a defensin-like (DEFL) family protein. O.I. C.G. H.G.
19.1 99.6 71.3 At2g44380 819045 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;PMO O.I. C.G. H.G.
19.0 99.5 22.7 At2g41310 818730 ATRR3 (RESPONSE REGULATOR 3) Encodes an A- type response Regulator that is primarily expressed in the root and is involved in cytokinin-mediated signalling. O.I. C.G. H.G.
18.8 99.5 23.4 At2g48080 819420 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
18.2 99.5 148.4 At5g59090 836026 ATSBT4.12 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast, nucleus, cytoplasm;BPOFAM O.I. C.G. H.G.
18.2 99.5 7.3 At1g62320 842530 early-responsive to dehydration protein-related / ERD protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;FPMO O.I. C.G. H.G.
17.9 99.5 44.1 At1g21140 838710 nodulin, putative F:unknown;P:biological_process unknown;C:unknown;BOPFA O.I. C.G. H.G.
17.7 99.5 144.0 At5g26260 832695 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POF O.I. C.G. H.G.
17.7 99.5 30.4 At2g28160 817362 FRU (FER-LIKE REGULATOR OF IRON UPTAKE) Encodes a putative transcription factor that regulates iron uptake responses. mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency. The expression of many iron-regulated genes is dependent on FIT1. It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake. O.I. C.G. H.G.
17.5 99.5 80.5 At4g39660 830120 AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2) alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA, O.I. C.G. H.G.
17.2 99.5 27.5 At3g10960 820267 xanthine/uracil permease family protein F:transmembrane transporter activity, transporter activity;P:transport;C:membrane;BOFAPM O.I. C.G. H.G.
16.9 99.5 360.0 At4g37410 829895 CYP81F4 member of CYP81F O.I. C.G. H.G.
16.8 99.5 50.6 At1g14120 837971 2-oxoglutarate-dependent dioxygenase, putative F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFM O.I. C.G. H.G.
16.6 99.5 28.5 At1g20380 838626 prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative F:serine-type peptidase activity, serine-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;OBMPAF O.I. C.G. H.G.
16.3 99.5 54.3 At4g17800 827502 DNA-binding protein-related F:unknown;P:biological_process unknown;C:cellular_component unknown;PBMOF O.I. C.G. H.G.
16.2 99.5 171.0 At4g11310 826733 cysteine proteinase, putative cysteine proteinase precursor-like protein O.I. C.G. H.G.
16.2 99.5 22.7 At3g26330 822237 CYP71B37 putative cytochrome P450 O.I. C.G. H.G.
16.1 99.5 25.9 At5g15130 831365 WRKY72 member of WRKY Transcription Factor; Group II-b O.I. C.G. H.G.
16.0 99.5 19.1 At3g45680 823710 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport, response to nematode;C:membrane;PBMOF O.I. C.G. H.G.
15.9 99.5 186.2 At1g44800 841044 nodulin MtN21 family protein F:molecular_function unknown;P:unknown;C:membrane;BOPAM O.I. C.G. H.G.
15.9 99.5 99.6 At4g28250 828940 ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3) putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
15.9 99.5 53.3 At3g20015 821540 aspartic-type endopeptidase F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFO O.I. C.G. H.G.
15.9 99.5 15.1 At3g47980 823953 integral membrane HPP family protein F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast;BOFP O.I. C.G. H.G.
15.8 99.5 51.7 At2g01880 814719 PAP7 (PURPLE ACID PHOSPHATASE 7) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;MOBPF O.I. C.G. H.G.
15.8 99.5 38.1 At2g40330 818626 Bet v I allergen family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PBO O.I. C.G. H.G.
15.7 99.5 55.4 At4g27860 828899 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;POMBF O.I. C.G. H.G.
15.7 99.5 16.7 At1g13670 837928 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
15.5 99.5 45.8 At5g38030 833782 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAM O.I. C.G. H.G.
15.3 99.4 71.2 At1g67030 843022 ZFP6 (ZINC FINGER PROTEIN 6) Encodes a zinc finger protein containing only a single zinc finger. O.I. C.G. H.G.
15.3 99.4 66.8 At3g16340 820881 PDR1 F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMFAPV O.I. C.G. H.G.
15.2 99.4 118.4 At2g47180 819331 AtGolS1 (Arabidopsis thaliana galactinol synthase 1) F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:response to high light intensity, response to hydrogen peroxide, carbohydrate biosynthetic process, response to heat;C:cellular_component unknown;PMFVBO O.I. C.G. H.G.
15.2 99.4 23.0 At1g20900 838683 ESC (ESCAROLA) Encodes an AT hook domain containing protein that acts redundantly with SOB3 to modulate hypocotyl growth inhibition in response to light. O.I. C.G. H.G.
15.1 99.4 9.6 At5g04370 830316 NAMT1 A member of the Arabidopsis SABATH methyltransferase gene family. Encodes NAMT1, a methyltransferase that methylates nicotinic acid. O.I. C.G. H.G.
15.0 99.4 34.2 At1g72300 843562 leucine-rich repeat transmembrane protein kinase, putative Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. O.I. C.G. H.G.
14.9 99.4 71.7 At4g19030 827641 NLM1 an aquaporin whose expression level is reduced by ABA, NaCl, dark, and dessication. is expressed at relatively low levels under normal conditions. Also functions in arsenite transport and tolerance. O.I. C.G. H.G.
14.8 99.4 202.0 At5g50200 835085 WR3 (WOUND-RESPONSIVE 3) Wound-responsive gene 3 (WR3). Encodes a high-affinity nitrate transporter. Up-regulated by nitrate. Involved in jasmonic acid-independent wound signal transduction. O.I. C.G. H.G.
14.5 99.4 96.7 At1g23720 838982 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MBFOPVA O.I. C.G. H.G.
14.5 99.4 13.2 At4g32860 829422 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
14.4 99.4 194.8 At1g78000 844135 SULTR1 Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes. O.I. C.G. H.G.
14.4 99.4 47.5 At2g04800 815024 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P O.I. C.G. H.G.
14.4 99.4 18.4 At3g61380 825310 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMPFBV O.I. C.G. H.G.
14.4 99.4 16.8 At3g46700 823823 UDP-glycosyltransferase/ transferase, transferring glycosyl groups F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVOF O.I. C.G. H.G.
14.2 99.4 195.9 At2g05440 815093 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA O.I. C.G. H.G.
14.2 99.4 186.8 At5g43350 834353 PHT1 Encodes an inorganic phosphate transporter. Mutants display enhanced arsenic accumulation. O.I. C.G. H.G.
14.1 99.4 179.4 At1g06640 837173 2-oxoglutarate-dependent dioxygenase, putative encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase O.I. C.G. H.G.
14.0 99.4 87.7 At2g22330 816765 CYP79B3 Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. O.I. C.G. H.G.
14.0 99.4 53.7 At5g40510 834049 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FBPOA O.I. C.G. H.G.
14.0 99.4 47.6 At2g29750 817525 UGT71C1 (UDP-GLUCOSYL TRANSFERASE 71C1) F:quercetin 3'-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF O.I. C.G. H.G.
14.0 99.4 25.7 At1g71870 843518 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
13.7 99.4 109.5 At3g11280 820299 myb family transcription factor Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay). O.I. C.G. H.G.
13.7 99.4 24.5 At3g55740 824740 PROT2 (PROLINE TRANSPORTER 2) Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed most highly in the roots. O.I. C.G. H.G.
13.6 99.4 59.3 At5g25890 832658 IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28) encodes a protein that may be a negative regulator of lateral root formation in response to auxin. It is a member of IAA/ARF gene family and is plant-specific. Gain of function mutations in this gene suppresses lateral root formation and is resistant to inhibition of root elongation by auxin, cytokinin, and ethylene. O.I. C.G. H.G.
13.6 99.4 23.8 At3g45650 823707 NAXT1 (NITRATE EXCRETION TRANSPORTER1) Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots. O.I. C.G. H.G.
13.6 99.4 21.4 At5g25160 832587 ZFP3 (ZINC FINGER PROTEIN 3) Encodes a zinc finger protein containing only a single zinc finger. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
72.7	99.9	69.0	At1g72140	843545	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport, response to nematode;C:plasma membrane, membrane;BPMOF	O.I.	C.G.	H.G.
63.0	99.8	233.4	At3g59930	825163	-	Encodes a defensin-like (DEFL) family protein.	O.I.	C.G.	H.G.
59.4	99.8	54.2	At4g18510	827583	CLE2 (CLAVATA3/ESR-RELATED)	CLE2, putative ligand, member of large gene family homologous to Clavata3	O.I.	C.G.	H.G.
58.9	99.8	114.6	At2g32270	817787	ZIP3	A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root. also response to iron deficiency.	O.I.	C.G.	H.G.
56.5	99.8	30.6	At2g19060	816423	GDSL-motif lipase/hydrolase family protein	F:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
51.6	99.8	91.5	At5g65280	836653	GCL1 (GCR2-LIKE 1)	Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.	O.I.	C.G.	H.G.
43.3	99.8	87.2	At3g59220	825091	PRN (PIRIN)	encodes a cupin-domain containing protein that is similar to pirins which interact with a CCAAT box binding transcription factor. The protein interacts with GPA1 (G protein alpha-subunit) in vitro. Mutants in the gene are affected in germination and early seedling development.	O.I.	C.G.	H.G.
42.3	99.8	342.8	At1g08090	837327	ATNRT2:1 (NITRATE TRANSPORTER 2:1)	High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.	O.I.	C.G.	H.G.
40.1	99.8	290.0	At1g21310	838728	ATEXT3 (EXTENSIN 3)	Encodes extensin 3.	O.I.	C.G.	H.G.
38.1	99.8	77.0	At5g06300	830518	carboxy-lyase	F:carboxy-lyase activity;P:metabolic process;C:unknown;BOPFMA	O.I.	C.G.	H.G.
37.3	99.7	78.4	At5g25810	832650	tny (TINY)	encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family (TINY). The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Ectopic or overexpression of this gene in a Ds tagged line has reduced cell expansion. The expression of this gene is induced by ethylene and light and appears to stimulate cytokinin biosynthesis.	O.I.	C.G.	H.G.
36.7	99.7	62.5	At3g01260	821171	aldose 1-epimerase/ carbohydrate binding / catalytic/ isomerase	F:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;OBMFPVA	O.I.	C.G.	H.G.
34.2	99.7	14.9	At3g62740	825449	BGLU7 (BETA GLUCOSIDASE 7)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA	O.I.	C.G.	H.G.
32.8	99.7	61.5	At3g16690	820921	nodulin MtN3 family protein	F:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMO	O.I.	C.G.	H.G.
32.0	99.7	41.3	At1g30840	839967	ATPUP4	Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.	O.I.	C.G.	H.G.
31.2	99.7	20.3	At2g43150	818917	proline-rich extensin-like family protein	F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBFOVA	O.I.	C.G.	H.G.
30.3	99.7	29.4	At1g53920	841830	GLIP5	Contains lipase signature motif and GDSL domain.	O.I.	C.G.	H.G.
30.1	99.7	23.7	At1g58170	842184	disease resistance-responsive protein-related / dirigent protein-related	F:molecular_function unknown;P:N-terminal protein myristoylation, lignan biosynthetic process, defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
30.0	99.7	159.2	At5g48430	834898	aspartic-type endopeptidase	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;P	O.I.	C.G.	H.G.
29.4	99.7	34.2	At1g12950	837853	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
29.2	99.7	19.4	At1g77520	844088	O-methyltransferase family 2 protein	F:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOM	O.I.	C.G.	H.G.
27.1	99.7	86.9	At3g16800	820933	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:nucleus, cytoplasm;PMOFV	O.I.	C.G.	H.G.
27.1	99.7	69.8	At5g43520	834372	DC1 domain-containing protein	F:unknown;P:unknown;C:unknown;POMF	O.I.	C.G.	H.G.
26.8	99.7	120.4	At1g11670	837711	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:N-terminal protein myristoylation, multidrug transport;C:membrane;BOPFAM	O.I.	C.G.	H.G.
26.3	99.7	41.4	At4g35150	829667	O-methyltransferase family 2 protein	F:methyltransferase activity, O-methyltransferase activity, protein dimerization activity;P:unknown;C:cytosol;PBFMO	O.I.	C.G.	H.G.
25.9	99.7	65.6	At1g31710	840058	copper amine oxidase, putative	F:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA	O.I.	C.G.	H.G.
25.8	99.7	25.8	At1g67110	843031	CYP735A2	member of CYP709A	O.I.	C.G.	H.G.
25.4	99.6	79.4	At3g24290	822017	AMT1	F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPA	O.I.	C.G.	H.G.
25.2	99.6	95.6	At1g13300	837890	myb family transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POVBMF	O.I.	C.G.	H.G.
25.0	99.6	42.0	At5g18860	832004	inosine-uridine preferring nucleoside hydrolase family protein	F:hydrolase activity;P:biological_process unknown;C:cell wall;BOMPFA	O.I.	C.G.	H.G.
24.5	99.6	68.7	At3g27170	822336	CLC-B (CHLORIDE CHANNEL B)	member of Anion channel protein family	O.I.	C.G.	H.G.
24.3	99.6	68.3	At5g60890	836210	MYB34 (MYB DOMAIN PROTEIN 34)	Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis.	O.I.	C.G.	H.G.
23.2	99.6	67.7	At2g40900	818687	nodulin MtN21 family protein	F:unknown;P:unknown;C:membrane;BOPAM	O.I.	C.G.	H.G.
23.2	99.6	34.4	At5g06570	830545	hydrolase	F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
22.7	99.6	40.9	At2g22770	816807	NAI1	regulates the development of ER bodies. also involves in response to the endophytic fungus Piriformospora indica.	O.I.	C.G.	H.G.
21.6	99.6	8.7	At4g25410	828644	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFM	O.I.	C.G.	H.G.
21.4	99.6	31.2	At5g15830	831440	AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POMFB	O.I.	C.G.	H.G.
20.6	99.6	24.2	At1g78120	844148	tetratricopeptide repeat (TPR)-containing protein	F:binding;P:unknown;C:mitochondrion;MOBFPA	O.I.	C.G.	H.G.
20.5	99.6	42.1	At3g45700	823712	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;PMBOF	O.I.	C.G.	H.G.
20.2	99.6	191.3	At1g35580	840454	CINV1 (cytosolic invertase 1)	Encodes a protein with cytosolic (alkaline/neutral) invertase activity. The protein was shown to interact with PIP5K9.	O.I.	C.G.	H.G.
20.2	99.6	52.3	At2g29660	817516	zinc finger (C2H2 type) family protein	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:anchored to membrane;PFO	O.I.	C.G.	H.G.
20.1	99.6	36.5	At3g50300	824192	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
19.9	99.6	87.8	At1g75540	843890	STH2 (SALT TOLERANCE HOMOLOG2)	F:transcription factor activity, zinc ion binding;P:unknown;C:intracellular;POMF	O.I.	C.G.	H.G.
19.9	99.6	56.4	At3g45710	823713	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;PBMOFA	O.I.	C.G.	H.G.
19.6	99.6	34.5	At1g14780	838043	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
19.5	99.6	22.2	At4g15400	827208	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:unknown;C:cellular_component unknown;PFB	O.I.	C.G.	H.G.
19.1	99.6	329.1	At4g22212	828313	-	Encodes a defensin-like (DEFL) family protein.	O.I.	C.G.	H.G.
19.1	99.6	71.3	At2g44380	819045	DC1 domain-containing protein	F:unknown;P:unknown;C:unknown;PMO	O.I.	C.G.	H.G.
19.0	99.5	22.7	At2g41310	818730	ATRR3 (RESPONSE REGULATOR 3)	Encodes an A- type response Regulator that is primarily expressed in the root and is involved in cytokinin-mediated signalling.	O.I.	C.G.	H.G.
18.8	99.5	23.4	At2g48080	819420	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
18.2	99.5	148.4	At5g59090	836026	ATSBT4.12	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast, nucleus, cytoplasm;BPOFAM	O.I.	C.G.	H.G.
18.2	99.5	7.3	At1g62320	842530	early-responsive to dehydration protein-related / ERD protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;FPMO	O.I.	C.G.	H.G.
17.9	99.5	44.1	At1g21140	838710	nodulin, putative	F:unknown;P:biological_process unknown;C:unknown;BOPFA	O.I.	C.G.	H.G.
17.7	99.5	144.0	At5g26260	832695	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POF	O.I.	C.G.	H.G.
17.7	99.5	30.4	At2g28160	817362	FRU (FER-LIKE REGULATOR OF IRON UPTAKE)	Encodes a putative transcription factor that regulates iron uptake responses. mRNA is detected in the outer cell layers of the root and accumulates in response to iron deficiency. The expression of many iron-regulated genes is dependent on FIT1. It specifically regulates FRO2 at the level of mRNA accumulation and IRT1 at the level of protein accumulation.Similar to FER in tomato and is a regulator of iron uptake.	O.I.	C.G.	H.G.
17.5	99.5	80.5	At4g39660	830120	AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2)	alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA,	O.I.	C.G.	H.G.
17.2	99.5	27.5	At3g10960	820267	xanthine/uracil permease family protein	F:transmembrane transporter activity, transporter activity;P:transport;C:membrane;BOFAPM	O.I.	C.G.	H.G.
16.9	99.5	360.0	At4g37410	829895	CYP81F4	member of CYP81F	O.I.	C.G.	H.G.
16.8	99.5	50.6	At1g14120	837971	2-oxoglutarate-dependent dioxygenase, putative	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:biological_process unknown;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
16.6	99.5	28.5	At1g20380	838626	prolyl oligopeptidase, putative / prolyl endopeptidase, putative / post-proline cleaving enzyme, putative	F:serine-type peptidase activity, serine-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;OBMPAF	O.I.	C.G.	H.G.
16.3	99.5	54.3	At4g17800	827502	DNA-binding protein-related	F:unknown;P:biological_process unknown;C:cellular_component unknown;PBMOF	O.I.	C.G.	H.G.
16.2	99.5	171.0	At4g11310	826733	cysteine proteinase, putative	cysteine proteinase precursor-like protein	O.I.	C.G.	H.G.
16.2	99.5	22.7	At3g26330	822237	CYP71B37	putative cytochrome P450	O.I.	C.G.	H.G.
16.1	99.5	25.9	At5g15130	831365	WRKY72	member of WRKY Transcription Factor; Group II-b	O.I.	C.G.	H.G.
16.0	99.5	19.1	At3g45680	823710	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport, response to nematode;C:membrane;PBMOF	O.I.	C.G.	H.G.
15.9	99.5	186.2	At1g44800	841044	nodulin MtN21 family protein	F:molecular_function unknown;P:unknown;C:membrane;BOPAM	O.I.	C.G.	H.G.
15.9	99.5	99.6	At4g28250	828940	ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3)	putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
15.9	99.5	53.3	At3g20015	821540	aspartic-type endopeptidase	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFO	O.I.	C.G.	H.G.
15.9	99.5	15.1	At3g47980	823953	integral membrane HPP family protein	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast;BOFP	O.I.	C.G.	H.G.
15.8	99.5	51.7	At2g01880	814719	PAP7 (PURPLE ACID PHOSPHATASE 7)	F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:unknown;C:endomembrane system;MOBPF	O.I.	C.G.	H.G.
15.8	99.5	38.1	At2g40330	818626	Bet v I allergen family protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PBO	O.I.	C.G.	H.G.
15.7	99.5	55.4	At4g27860	828899	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;POMBF	O.I.	C.G.	H.G.
15.7	99.5	16.7	At1g13670	837928	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
15.5	99.5	45.8	At5g38030	833782	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAM	O.I.	C.G.	H.G.
15.3	99.4	71.2	At1g67030	843022	ZFP6 (ZINC FINGER PROTEIN 6)	Encodes a zinc finger protein containing only a single zinc finger.	O.I.	C.G.	H.G.
15.3	99.4	66.8	At3g16340	820881	PDR1	F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMFAPV	O.I.	C.G.	H.G.
15.2	99.4	118.4	At2g47180	819331	AtGolS1 (Arabidopsis thaliana galactinol synthase 1)	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:response to high light intensity, response to hydrogen peroxide, carbohydrate biosynthetic process, response to heat;C:cellular_component unknown;PMFVBO	O.I.	C.G.	H.G.
15.2	99.4	23.0	At1g20900	838683	ESC (ESCAROLA)	Encodes an AT hook domain containing protein that acts redundantly with SOB3 to modulate hypocotyl growth inhibition in response to light.	O.I.	C.G.	H.G.
15.1	99.4	9.6	At5g04370	830316	NAMT1	A member of the Arabidopsis SABATH methyltransferase gene family. Encodes NAMT1, a methyltransferase that methylates nicotinic acid.	O.I.	C.G.	H.G.
15.0	99.4	34.2	At1g72300	843562	leucine-rich repeat transmembrane protein kinase, putative	Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion.	O.I.	C.G.	H.G.
14.9	99.4	71.7	At4g19030	827641	NLM1	an aquaporin whose expression level is reduced by ABA, NaCl, dark, and dessication. is expressed at relatively low levels under normal conditions. Also functions in arsenite transport and tolerance.	O.I.	C.G.	H.G.
14.8	99.4	202.0	At5g50200	835085	WR3 (WOUND-RESPONSIVE 3)	Wound-responsive gene 3 (WR3). Encodes a high-affinity nitrate transporter. Up-regulated by nitrate. Involved in jasmonic acid-independent wound signal transduction.	O.I.	C.G.	H.G.
14.5	99.4	96.7	At1g23720	838982	proline-rich extensin-like family protein	F:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MBFOPVA	O.I.	C.G.	H.G.
14.5	99.4	13.2	At4g32860	829422	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
14.4	99.4	194.8	At1g78000	844135	SULTR1	Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes.	O.I.	C.G.	H.G.
14.4	99.4	47.5	At2g04800	815024	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P	O.I.	C.G.	H.G.
14.4	99.4	18.4	At3g61380	825310	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMPFBV	O.I.	C.G.	H.G.
14.4	99.4	16.8	At3g46700	823823	UDP-glycosyltransferase/ transferase, transferring glycosyl groups	F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVOF	O.I.	C.G.	H.G.
14.2	99.4	195.9	At2g05440	815093	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA	O.I.	C.G.	H.G.
14.2	99.4	186.8	At5g43350	834353	PHT1	Encodes an inorganic phosphate transporter. Mutants display enhanced arsenic accumulation.	O.I.	C.G.	H.G.
14.1	99.4	179.4	At1g06640	837173	2-oxoglutarate-dependent dioxygenase, putative	encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase	O.I.	C.G.	H.G.
14.0	99.4	87.7	At2g22330	816765	CYP79B3	Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.	O.I.	C.G.	H.G.
14.0	99.4	53.7	At5g40510	834049	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FBPOA	O.I.	C.G.	H.G.
14.0	99.4	47.6	At2g29750	817525	UGT71C1 (UDP-GLUCOSYL TRANSFERASE 71C1)	F:quercetin 3'-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF	O.I.	C.G.	H.G.
14.0	99.4	25.7	At1g71870	843518	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
13.7	99.4	109.5	At3g11280	820299	myb family transcription factor	Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).	O.I.	C.G.	H.G.
13.7	99.4	24.5	At3g55740	824740	PROT2 (PROLINE TRANSPORTER 2)	Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed most highly in the roots.	O.I.	C.G.	H.G.
13.6	99.4	59.3	At5g25890	832658	IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)	encodes a protein that may be a negative regulator of lateral root formation in response to auxin. It is a member of IAA/ARF gene family and is plant-specific. Gain of function mutations in this gene suppresses lateral root formation and is resistant to inhibition of root elongation by auxin, cytokinin, and ethylene.	O.I.	C.G.	H.G.
13.6	99.4	23.8	At3g45650	823707	NAXT1 (NITRATE EXCRETION TRANSPORTER1)	Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots.	O.I.	C.G.	H.G.
13.6	99.4	21.4	At5g25160	832587	ZFP3 (ZINC FINGER PROTEIN 3)	Encodes a zinc finger protein containing only a single zinc finger.	O.I.	C.G.	H.G.

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GSM ID	GSM133138
Assay name	S1500_2H_B
GSE experiment	GSE5688: AtGenExpress: Response to sulfate limitation

Microarray experiments to specifically-expressed genes

GSM ID GSM133138 Assay name S1500_2H_B GSE experiment GSE5688: AtGenExpress: Response to sulfate limitation

GSM ID GSM133138

Assay name S1500_2H_B

GSE experiment GSE5688: AtGenExpress: Response to sulfate limitation