Microarray experiments to specifically-expressed genes

GSM ID GSM133131
Assay name S1500_0H_A
GSE experiment GSE5688: AtGenExpress: Response to sulfate limitation

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
95.099.965.7At5g15830831440AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POMFBO.I.C.G.H.G.
71.799.987.6At4g08300826384nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BPOAMFO.I.C.G.H.G.
45.699.878.6At2g29660817516zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:anchored to membrane;PFOO.I.C.G.H.G.
44.799.869.0At3g01260821171aldose 1-epimerase/ carbohydrate binding / catalytic/ isomeraseF:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;OBMFPVAO.I.C.G.H.G.
44.299.824.5At3g49760824138AtbZIP5 (Arabidopsis thaliana basic leucine-zipper 5)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOFO.I.C.G.H.G.
40.899.840.3At2g28780817427unknown proteinF:unknown;P:biological_process unknown;C:mitochondrion;BPOO.I.C.G.H.G.
38.599.8157.8At1g23720838982proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MBFOPVAO.I.C.G.H.G.
35.899.771.8At3g28550822485proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPFBOVAO.I.C.G.H.G.
34.499.7308.9At1g08090837327ATNRT2:1 (NITRATE TRANSPORTER 2:1)High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.O.I.C.G.H.G.
33.999.7247.7At4g11310826733cysteine proteinase, putativecysteine proteinase precursor-like proteinO.I.C.G.H.G.
33.699.773.1At3g45710823713proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;PBMOFAO.I.C.G.H.G.
33.599.769.9At3g14280820648unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
33.399.786.2At2g32270817787ZIP3A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root. also response to iron deficiency.O.I.C.G.H.G.
33.099.721.3At1g78990844239transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBO.I.C.G.H.G.
32.999.7262.5At1g21310838728ATEXT3 (EXTENSIN 3)Encodes extensin 3.O.I.C.G.H.G.
26.099.780.3At3g24290822017AMT1F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPAO.I.C.G.H.G.
24.499.650.2At4g31730829301GDU1 (GLUTAMINE DUMPER 1)Glutamine dumper1 is a putative transmembrane protein. It is involved in glutamine secretionO.I.C.G.H.G.
24.399.621.2At4g26050828711leucine-rich repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;MPBOFAVO.I.C.G.H.G.
23.599.651.7At3g46130823756MYB111 (MYB DOMAIN PROTEIN 111)Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons.O.I.C.G.H.G.
23.399.6277.6At1g32450840139NRT1.5 (NITRATE TRANSPORTER 1.5)Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.O.I.C.G.H.G.
22.799.634.8At1g30840839967ATPUP4Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.O.I.C.G.H.G.
22.599.663.5At3g54580824623proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFBPOVAO.I.C.G.H.G.
22.099.665.9At2g40900818687nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BOPAMO.I.C.G.H.G.
21.999.659.7At2g29750817525UGT71C1 (UDP-GLUCOSYL TRANSFERASE 71C1)F:quercetin 3'-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVFO.I.C.G.H.G.
21.799.619.0At2g19060816423GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
21.299.624.6At1g78120844148tetratricopeptide repeat (TPR)-containing proteinF:binding;P:unknown;C:mitochondrion;MOBFPAO.I.C.G.H.G.
21.099.661.4At5g43520834372DC1 domain-containing proteinF:unknown;P:unknown;C:unknown;POMFO.I.C.G.H.G.
21.099.661.0At5g61340836255unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBO.I.C.G.H.G.
21.099.637.5At5g10210830885-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
21.099.614.8At4g36060829762basic helix-loop-helix (bHLH) family proteinF:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus, chloroplast, cytoplasm;PMOBFO.I.C.G.H.G.
20.199.6119.1At5g06630830551proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVAO.I.C.G.H.G.
19.999.637.1At1g10380837577unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
19.899.625.9At5g25160832587ZFP3 (ZINC FINGER PROTEIN 3)Encodes a zinc finger protein containing only a single zinc finger.O.I.C.G.H.G.
19.499.629.1At1g53680841805ATGSTU28 (GLUTATHIONE S-TRANSFERASE TAU 28)Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).O.I.C.G.H.G.
19.399.693.0At2g03090814838ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.O.I.C.G.H.G.
19.299.640.7At3g45700823712proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport;C:membrane;PMBOFO.I.C.G.H.G.
19.099.554.7At2g04800815024unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PO.I.C.G.H.G.
18.999.588.0At3g63200825495PLP9 (PATATIN-LIKE PROTEIN 9)F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:cellular_component unknown;BPMOFO.I.C.G.H.G.
18.999.574.6At3g25930822190universal stress protein (USP) family proteinF:molecular_function unknown;P:response to stress;C:cellular_component unknown;PO.I.C.G.H.G.
18.799.5106.3At5g06640830552proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MFPOBVAO.I.C.G.H.G.
18.799.560.0At2g22510816784hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMBVFAO.I.C.G.H.G.
18.699.5100.8At3g23430821924PHO1 (phosphate 1)mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains.O.I.C.G.H.G.
18.599.512.9At1g11450837687nodulin MtN21 family proteinF:unknown;P:unknown;C:endomembrane system, membrane;PBOAMO.I.C.G.H.G.
18.499.534.7At2g01950814726BRL2 (BRI1-LIKE 2)Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein.O.I.C.G.H.G.
18.099.513.1At1g67710843096ARR11 (RESPONSE REGULATOR 11)Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.O.I.C.G.H.G.
17.899.5121.6At3g62040825377catalytic/ hydrolaseF:hydrolase activity, catalytic activity;P:metabolic process;C:unknown;OBPFAO.I.C.G.H.G.
17.899.5105.6At4g28250828940ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3)putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.O.I.C.G.H.G.
17.699.5167.8At1g15380838107lactoylglutathione lyase family protein / glyoxalase I family proteinF:lactoylglutathione lyase activity;P:carbohydrate metabolic process;C:cellular_component unknown;BPOMFAO.I.C.G.H.G.
17.699.585.3At4g01450828176nodulin MtN21 family proteinF:unknown;P:unknown;C:endomembrane system, membrane;PBOMO.I.C.G.H.G.
17.699.514.5At4g32860829422unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
17.599.534.3At3g59690825138IQD13 (IQ-domain 13)F:calmodulin binding;P:unknown;C:plasma membrane;POMVFBO.I.C.G.H.G.
17.399.5126.6At2g24980817037proline-rich extensin-like family proteinF:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVAO.I.C.G.H.G.
17.399.556.0At4g17800827502DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:cellular_component unknown;PBMOFO.I.C.G.H.G.
17.099.566.1At3g06390819813integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
16.699.574.6At4g20390827787integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
16.399.5365.2At1g70850843422MLP34 (MLP-LIKE PROTEIN 34)F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
16.399.519.5At3g02850821052SKORmember of Stelar K+ outward rectifying channel (SKOR) family. Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.O.I.C.G.H.G.
15.999.598.5At5g65210836646TGA1F:transcription factor activity, calmodulin binding, DNA binding;P:defense response to bacterium;C:nucleus;POMO.I.C.G.H.G.
15.899.565.7At2g37460818323nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BPOAMFO.I.C.G.H.G.
15.799.5320.9At4g12550826868AIR1isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus.O.I.C.G.H.G.
15.699.527.3At3g25710822159BHLH32 (BASIC HELIX-LOOP-HELIX 32)F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOO.I.C.G.H.G.
15.699.511.7At2g25090817047CIPK16 (CBL-INTERACTING PROTEIN KINASE 16)Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.18), which has also been reported as a member of the CBL-interacting protein kinases (CIPK16).O.I.C.G.H.G.
15.499.5187.2At1g066408371732-oxoglutarate-dependent dioxygenase, putativeencodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenaseO.I.C.G.H.G.
15.499.5124.2At5g59780836099MYB59 (MYB DOMAIN PROTEIN 59)Encodes a putative transcription factor (MYB59).O.I.C.G.H.G.
15.399.488.8At4g12080826816DNA-binding family proteinF:DNA binding;P:unknown;C:mitochondrion, nucleolus, nucleus, cytoplasm;PMFOBVO.I.C.G.H.G.
15.399.417.5At2g22850816816AtbZIP6 (Arabidopsis thaliana basic leucine-zipper 6)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POMFO.I.C.G.H.G.
15.399.49.0At2g22920816823serine carboxypeptidase S10 family proteinF:serine-type carboxypeptidase activity;P:proteolysis;C:plant-type cell wall;PMFBOO.I.C.G.H.G.
15.199.421.6At1g80690844408unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFO.I.C.G.H.G.
15.199.45.8At2g139103768458-F:unknown;P:unknown;C:unknownO.I.C.G.H.G.
14.699.4259.8At2g01520814681MLP328 (MLP-LIKE PROTEIN 328)F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
14.699.450.9At5g44550834482integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
14.599.4109.1At5g10580830923unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPOO.I.C.G.H.G.
14.499.458.4At5g43180834336unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOO.I.C.G.H.G.
14.399.472.1At1g13300837890myb family transcription factorF:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POVBMFO.I.C.G.H.G.
14.399.426.5At4g18510827583CLE2 (CLAVATA3/ESR-RELATED)CLE2, putative ligand, member of large gene family homologous to Clavata3O.I.C.G.H.G.
14.199.419.7At3g22800821851leucine-rich repeat family protein / extensin family proteinF:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MPBOFVAO.I.C.G.H.G.
14.099.4271.3At2g01530814682MLP329 (MLP-LIKE PROTEIN 329)F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
13.899.4184.8At5g43780834400APS4sulfate adenylyltransferase, ATP sulfurylaseO.I.C.G.H.G.
13.899.425.6At1g71870843518MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
13.899.417.1At4g35030829655protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVAO.I.C.G.H.G.
13.799.4112.0At4g35060829658heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PO.I.C.G.H.G.
13.699.454.2At4g20070827752ATAAH (Arabidopsis thaliana Allantoate Amidohydrolase)The gene encoding Arabidopsis thaliana Allantoate Amidohydrolase (AtAAH)which catalyzes the allantoate deiminase reaction (EC 3.5.3.9)is expressed in all parts of the plant being consistent with a function in purine turnover in Arabidopsis.O.I.C.G.H.G.
13.699.410.4At4g18630827597unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMOFO.I.C.G.H.G.
13.599.434.1At4g13235826940EDA21 (embryo sac development arrest 21)Encodes a defensin-like (DEFL) family protein.O.I.C.G.H.G.
13.499.415.4At1g71692843497AGL12 (AGAMOUS-LIKE 12)Encodes a member of the MADS box family of transcription factors. Involved in root cell differentiation and flowering time. Loss of function mutations have abnormal cellular differentiation in the roots and are late flowering. AGL12 along with AGL14, and AGL17 is preferentially expressed in root tissues and represent the only characterized MADS box genes expressed in roots.O.I.C.G.H.G.
13.499.411.9At4g20230827770terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PFOO.I.C.G.H.G.
13.399.4170.2At1g44800841044nodulin MtN21 family proteinF:molecular_function unknown;P:unknown;C:membrane;BOPAMO.I.C.G.H.G.
13.399.462.2At3g16340820881PDR1F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMFAPVO.I.C.G.H.G.
13.399.438.0At1g21140838710nodulin, putativeF:unknown;P:biological_process unknown;C:unknown;BOPFAO.I.C.G.H.G.
13.199.413.5At4g03500827731ankyrin repeat family proteinF:protein binding;P:unknown;C:unknown;MOFPBVAO.I.C.G.H.G.
12.999.387.0At1g19600838547pfkB-type carbohydrate kinase family proteinF:kinase activity;P:D-ribose catabolic process;C:cellular_component unknown;BOMPAFO.I.C.G.H.G.
12.999.333.6At4g11210826723disease resistance-responsive family protein / dirigent family proteinF:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;PO.I.C.G.H.G.
12.999.329.6At4g31875829317unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
12.999.326.0At2g35270818094DNA-binding protein-relatedF:unknown;P:biological_process unknown;C:cellular_component unknown;PMBOFVAO.I.C.G.H.G.
12.999.318.5At5g06800830570myb family transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;POFMO.I.C.G.H.G.
12.999.34.3At5g54700835559ankyrin repeat family proteinF:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOBFO.I.C.G.H.G.
12.899.3152.4At1g35580840454CINV1 (cytosolic invertase 1)Encodes a protein with cytosolic (alkaline/neutral) invertase activity. The protein was shown to interact with PIP5K9.O.I.C.G.H.G.
12.899.399.9At3g54260824593unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PMO.I.C.G.H.G.
12.899.349.7At3g27170822336CLC-B (CHLORIDE CHANNEL B)member of Anion channel protein familyO.I.C.G.H.G.
12.899.345.5At1g01640839534speckle-type POZ protein-relatedF:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOVFO.I.C.G.H.G.



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