CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133131

Assay name S1500_0H_A

GSE experiment GSE5688: AtGenExpress: Response to sulfate limitation

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
95.0 99.9 65.7 At5g15830 831440 AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POMFB O.I. C.G. H.G.
71.7 99.9 87.6 At4g08300 826384 nodulin MtN21 family protein F:unknown;P:unknown;C:membrane;BPOAMF O.I. C.G. H.G.
45.6 99.8 78.6 At2g29660 817516 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:anchored to membrane;PFO O.I. C.G. H.G.
44.7 99.8 69.0 At3g01260 821171 aldose 1-epimerase/ carbohydrate binding / catalytic/ isomerase F:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;OBMFPVA O.I. C.G. H.G.
44.2 99.8 24.5 At3g49760 824138 AtbZIP5 (Arabidopsis thaliana basic leucine-zipper 5) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOF O.I. C.G. H.G.
40.8 99.8 40.3 At2g28780 817427 unknown protein F:unknown;P:biological_process unknown;C:mitochondrion;BPO O.I. C.G. H.G.
38.5 99.8 157.8 At1g23720 838982 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MBFOPVA O.I. C.G. H.G.
35.8 99.7 71.8 At3g28550 822485 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPFBOVA O.I. C.G. H.G.
34.4 99.7 308.9 At1g08090 837327 ATNRT2:1 (NITRATE TRANSPORTER 2:1) High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake. O.I. C.G. H.G.
33.9 99.7 247.7 At4g11310 826733 cysteine proteinase, putative cysteine proteinase precursor-like protein O.I. C.G. H.G.
33.6 99.7 73.1 At3g45710 823713 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PBMOFA O.I. C.G. H.G.
33.5 99.7 69.9 At3g14280 820648 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
33.3 99.7 86.2 At2g32270 817787 ZIP3 A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root. also response to iron deficiency. O.I. C.G. H.G.
33.0 99.7 21.3 At1g78990 844239 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB O.I. C.G. H.G.
32.9 99.7 262.5 At1g21310 838728 ATEXT3 (EXTENSIN 3) Encodes extensin 3. O.I. C.G. H.G.
26.0 99.7 80.3 At3g24290 822017 AMT1 F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPA O.I. C.G. H.G.
24.4 99.6 50.2 At4g31730 829301 GDU1 (GLUTAMINE DUMPER 1) Glutamine dumper1 is a putative transmembrane protein. It is involved in glutamine secretion O.I. C.G. H.G.
24.3 99.6 21.2 At4g26050 828711 leucine-rich repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MPBOFAV O.I. C.G. H.G.
23.5 99.6 51.7 At3g46130 823756 MYB111 (MYB DOMAIN PROTEIN 111) Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons. O.I. C.G. H.G.
23.3 99.6 277.6 At1g32450 840139 NRT1.5 (NITRATE TRANSPORTER 1.5) Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells. O.I. C.G. H.G.
22.7 99.6 34.8 At1g30840 839967 ATPUP4 Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. O.I. C.G. H.G.
22.5 99.6 63.5 At3g54580 824623 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFBPOVA O.I. C.G. H.G.
22.0 99.6 65.9 At2g40900 818687 nodulin MtN21 family protein F:unknown;P:unknown;C:membrane;BOPAM O.I. C.G. H.G.
21.9 99.6 59.7 At2g29750 817525 UGT71C1 (UDP-GLUCOSYL TRANSFERASE 71C1) F:quercetin 3'-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF O.I. C.G. H.G.
21.7 99.6 19.0 At2g19060 816423 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
21.2 99.6 24.6 At1g78120 844148 tetratricopeptide repeat (TPR)-containing protein F:binding;P:unknown;C:mitochondrion;MOBFPA O.I. C.G. H.G.
21.0 99.6 61.4 At5g43520 834372 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;POMF O.I. C.G. H.G.
21.0 99.6 61.0 At5g61340 836255 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PB O.I. C.G. H.G.
21.0 99.6 37.5 At5g10210 830885 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
21.0 99.6 14.8 At4g36060 829762 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus, chloroplast, cytoplasm;PMOBF O.I. C.G. H.G.
20.1 99.6 119.1 At5g06630 830551 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVA O.I. C.G. H.G.
19.9 99.6 37.1 At1g10380 837577 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
19.8 99.6 25.9 At5g25160 832587 ZFP3 (ZINC FINGER PROTEIN 3) Encodes a zinc finger protein containing only a single zinc finger. O.I. C.G. H.G.
19.4 99.6 29.1 At1g53680 841805 ATGSTU28 (GLUTATHIONE S-TRANSFERASE TAU 28) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
19.3 99.6 93.0 At2g03090 814838 ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
19.2 99.6 40.7 At3g45700 823712 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PMBOF O.I. C.G. H.G.
19.0 99.5 54.7 At2g04800 815024 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P O.I. C.G. H.G.
18.9 99.5 88.0 At3g63200 825495 PLP9 (PATATIN-LIKE PROTEIN 9) F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:cellular_component unknown;BPMOF O.I. C.G. H.G.
18.9 99.5 74.6 At3g25930 822190 universal stress protein (USP) family protein F:molecular_function unknown;P:response to stress;C:cellular_component unknown;P O.I. C.G. H.G.
18.7 99.5 106.3 At5g06640 830552 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MFPOBVA O.I. C.G. H.G.
18.7 99.5 60.0 At2g22510 816784 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMBVFA O.I. C.G. H.G.
18.6 99.5 100.8 At3g23430 821924 PHO1 (phosphate 1) mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains. O.I. C.G. H.G.
18.5 99.5 12.9 At1g11450 837687 nodulin MtN21 family protein F:unknown;P:unknown;C:endomembrane system, membrane;PBOAM O.I. C.G. H.G.
18.4 99.5 34.7 At2g01950 814726 BRL2 (BRI1-LIKE 2) Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein. O.I. C.G. H.G.
18.0 99.5 13.1 At1g67710 843096 ARR11 (RESPONSE REGULATOR 11) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. O.I. C.G. H.G.
17.8 99.5 121.6 At3g62040 825377 catalytic/ hydrolase F:hydrolase activity, catalytic activity;P:metabolic process;C:unknown;OBPFA O.I. C.G. H.G.
17.8 99.5 105.6 At4g28250 828940 ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3) putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
17.6 99.5 167.8 At1g15380 838107 lactoylglutathione lyase family protein / glyoxalase I family protein F:lactoylglutathione lyase activity;P:carbohydrate metabolic process;C:cellular_component unknown;BPOMFA O.I. C.G. H.G.
17.6 99.5 85.3 At4g01450 828176 nodulin MtN21 family protein F:unknown;P:unknown;C:endomembrane system, membrane;PBOM O.I. C.G. H.G.
17.6 99.5 14.5 At4g32860 829422 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
17.5 99.5 34.3 At3g59690 825138 IQD13 (IQ-domain 13) F:calmodulin binding;P:unknown;C:plasma membrane;POMVFB O.I. C.G. H.G.
17.3 99.5 126.6 At2g24980 817037 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVA O.I. C.G. H.G.
17.3 99.5 56.0 At4g17800 827502 DNA-binding protein-related F:unknown;P:biological_process unknown;C:cellular_component unknown;PBMOF O.I. C.G. H.G.
17.0 99.5 66.1 At3g06390 819813 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
16.6 99.5 74.6 At4g20390 827787 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
16.3 99.5 365.2 At1g70850 843422 MLP34 (MLP-LIKE PROTEIN 34) F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
16.3 99.5 19.5 At3g02850 821052 SKOR member of Stelar K+ outward rectifying channel (SKOR) family. Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+. O.I. C.G. H.G.
15.9 99.5 98.5 At5g65210 836646 TGA1 F:transcription factor activity, calmodulin binding, DNA binding;P:defense response to bacterium;C:nucleus;POM O.I. C.G. H.G.
15.8 99.5 65.7 At2g37460 818323 nodulin MtN21 family protein F:unknown;P:unknown;C:membrane;BPOAMF O.I. C.G. H.G.
15.7 99.5 320.9 At4g12550 826868 AIR1 isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus. O.I. C.G. H.G.
15.6 99.5 27.3 At3g25710 822159 BHLH32 (BASIC HELIX-LOOP-HELIX 32) F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
15.6 99.5 11.7 At2g25090 817047 CIPK16 (CBL-INTERACTING PROTEIN KINASE 16) Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.18), which has also been reported as a member of the CBL-interacting protein kinases (CIPK16). O.I. C.G. H.G.
15.4 99.5 187.2 At1g06640 837173 2-oxoglutarate-dependent dioxygenase, putative encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase O.I. C.G. H.G.
15.4 99.5 124.2 At5g59780 836099 MYB59 (MYB DOMAIN PROTEIN 59) Encodes a putative transcription factor (MYB59). O.I. C.G. H.G.
15.3 99.4 88.8 At4g12080 826816 DNA-binding family protein F:DNA binding;P:unknown;C:mitochondrion, nucleolus, nucleus, cytoplasm;PMFOBV O.I. C.G. H.G.
15.3 99.4 17.5 At2g22850 816816 AtbZIP6 (Arabidopsis thaliana basic leucine-zipper 6) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POMF O.I. C.G. H.G.
15.3 99.4 9.0 At2g22920 816823 serine carboxypeptidase S10 family protein F:serine-type carboxypeptidase activity;P:proteolysis;C:plant-type cell wall;PMFBO O.I. C.G. H.G.
15.1 99.4 21.6 At1g80690 844408 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF O.I. C.G. H.G.
15.1 99.4 5.8 At2g13910 3768458 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
14.6 99.4 259.8 At2g01520 814681 MLP328 (MLP-LIKE PROTEIN 328) F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
14.6 99.4 50.9 At5g44550 834482 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
14.5 99.4 109.1 At5g10580 830923 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPO O.I. C.G. H.G.
14.4 99.4 58.4 At5g43180 834336 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBO O.I. C.G. H.G.
14.3 99.4 72.1 At1g13300 837890 myb family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POVBMF O.I. C.G. H.G.
14.3 99.4 26.5 At4g18510 827583 CLE2 (CLAVATA3/ESR-RELATED) CLE2, putative ligand, member of large gene family homologous to Clavata3 O.I. C.G. H.G.
14.1 99.4 19.7 At3g22800 821851 leucine-rich repeat family protein / extensin family protein F:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MPBOFVA O.I. C.G. H.G.
14.0 99.4 271.3 At2g01530 814682 MLP329 (MLP-LIKE PROTEIN 329) F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
13.8 99.4 184.8 At5g43780 834400 APS4 sulfate adenylyltransferase, ATP sulfurylase O.I. C.G. H.G.
13.8 99.4 25.6 At1g71870 843518 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
13.8 99.4 17.1 At4g35030 829655 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVA O.I. C.G. H.G.
13.7 99.4 112.0 At4g35060 829658 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P O.I. C.G. H.G.
13.6 99.4 54.2 At4g20070 827752 ATAAH (Arabidopsis thaliana Allantoate Amidohydrolase) The gene encoding Arabidopsis thaliana Allantoate Amidohydrolase (AtAAH)which catalyzes the allantoate deiminase reaction (EC 3.5.3.9)is expressed in all parts of the plant being consistent with a function in purine turnover in Arabidopsis. O.I. C.G. H.G.
13.6 99.4 10.4 At4g18630 827597 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PMOF O.I. C.G. H.G.
13.5 99.4 34.1 At4g13235 826940 EDA21 (embryo sac development arrest 21) Encodes a defensin-like (DEFL) family protein. O.I. C.G. H.G.
13.4 99.4 15.4 At1g71692 843497 AGL12 (AGAMOUS-LIKE 12) Encodes a member of the MADS box family of transcription factors. Involved in root cell differentiation and flowering time. Loss of function mutations have abnormal cellular differentiation in the roots and are late flowering. AGL12 along with AGL14, and AGL17 is preferentially expressed in root tissues and represent the only characterized MADS box genes expressed in roots. O.I. C.G. H.G.
13.4 99.4 11.9 At4g20230 827770 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PFO O.I. C.G. H.G.
13.3 99.4 170.2 At1g44800 841044 nodulin MtN21 family protein F:molecular_function unknown;P:unknown;C:membrane;BOPAM O.I. C.G. H.G.
13.3 99.4 62.2 At3g16340 820881 PDR1 F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMFAPV O.I. C.G. H.G.
13.3 99.4 38.0 At1g21140 838710 nodulin, putative F:unknown;P:biological_process unknown;C:unknown;BOPFA O.I. C.G. H.G.
13.1 99.4 13.5 At4g03500 827731 ankyrin repeat family protein F:protein binding;P:unknown;C:unknown;MOFPBVA O.I. C.G. H.G.
12.9 99.3 87.0 At1g19600 838547 pfkB-type carbohydrate kinase family protein F:kinase activity;P:D-ribose catabolic process;C:cellular_component unknown;BOMPAF O.I. C.G. H.G.
12.9 99.3 33.6 At4g11210 826723 disease resistance-responsive family protein / dirigent family protein F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P O.I. C.G. H.G.
12.9 99.3 29.6 At4g31875 829317 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
12.9 99.3 26.0 At2g35270 818094 DNA-binding protein-related F:unknown;P:biological_process unknown;C:cellular_component unknown;PMBOFVA O.I. C.G. H.G.
12.9 99.3 18.5 At5g06800 830570 myb family transcription factor F:transcription factor activity;P:regulation of transcription;C:unknown;POFM O.I. C.G. H.G.
12.9 99.3 4.3 At5g54700 835559 ankyrin repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOBF O.I. C.G. H.G.
12.8 99.3 152.4 At1g35580 840454 CINV1 (cytosolic invertase 1) Encodes a protein with cytosolic (alkaline/neutral) invertase activity. The protein was shown to interact with PIP5K9. O.I. C.G. H.G.
12.8 99.3 99.9 At3g54260 824593 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PM O.I. C.G. H.G.
12.8 99.3 49.7 At3g27170 822336 CLC-B (CHLORIDE CHANNEL B) member of Anion channel protein family O.I. C.G. H.G.
12.8 99.3 45.5 At1g01640 839534 speckle-type POZ protein-related F:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOVF O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
95.0	99.9	65.7	At5g15830	831440	AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POMFB	O.I.	C.G.	H.G.
71.7	99.9	87.6	At4g08300	826384	nodulin MtN21 family protein	F:unknown;P:unknown;C:membrane;BPOAMF	O.I.	C.G.	H.G.
45.6	99.8	78.6	At2g29660	817516	zinc finger (C2H2 type) family protein	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:anchored to membrane;PFO	O.I.	C.G.	H.G.
44.7	99.8	69.0	At3g01260	821171	aldose 1-epimerase/ carbohydrate binding / catalytic/ isomerase	F:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;OBMFPVA	O.I.	C.G.	H.G.
44.2	99.8	24.5	At3g49760	824138	AtbZIP5 (Arabidopsis thaliana basic leucine-zipper 5)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOF	O.I.	C.G.	H.G.
40.8	99.8	40.3	At2g28780	817427	unknown protein	F:unknown;P:biological_process unknown;C:mitochondrion;BPO	O.I.	C.G.	H.G.
38.5	99.8	157.8	At1g23720	838982	proline-rich extensin-like family protein	F:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MBFOPVA	O.I.	C.G.	H.G.
35.8	99.7	71.8	At3g28550	822485	proline-rich extensin-like family protein	F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPFBOVA	O.I.	C.G.	H.G.
34.4	99.7	308.9	At1g08090	837327	ATNRT2:1 (NITRATE TRANSPORTER 2:1)	High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake.	O.I.	C.G.	H.G.
33.9	99.7	247.7	At4g11310	826733	cysteine proteinase, putative	cysteine proteinase precursor-like protein	O.I.	C.G.	H.G.
33.6	99.7	73.1	At3g45710	823713	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;PBMOFA	O.I.	C.G.	H.G.
33.5	99.7	69.9	At3g14280	820648	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
33.3	99.7	86.2	At2g32270	817787	ZIP3	A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root. also response to iron deficiency.	O.I.	C.G.	H.G.
33.0	99.7	21.3	At1g78990	844239	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB	O.I.	C.G.	H.G.
32.9	99.7	262.5	At1g21310	838728	ATEXT3 (EXTENSIN 3)	Encodes extensin 3.	O.I.	C.G.	H.G.
26.0	99.7	80.3	At3g24290	822017	AMT1	F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPA	O.I.	C.G.	H.G.
24.4	99.6	50.2	At4g31730	829301	GDU1 (GLUTAMINE DUMPER 1)	Glutamine dumper1 is a putative transmembrane protein. It is involved in glutamine secretion	O.I.	C.G.	H.G.
24.3	99.6	21.2	At4g26050	828711	leucine-rich repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MPBOFAV	O.I.	C.G.	H.G.
23.5	99.6	51.7	At3g46130	823756	MYB111 (MYB DOMAIN PROTEIN 111)	Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons.	O.I.	C.G.	H.G.
23.3	99.6	277.6	At1g32450	840139	NRT1.5 (NITRATE TRANSPORTER 1.5)	Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.	O.I.	C.G.	H.G.
22.7	99.6	34.8	At1g30840	839967	ATPUP4	Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.	O.I.	C.G.	H.G.
22.5	99.6	63.5	At3g54580	824623	proline-rich extensin-like family protein	F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFBPOVA	O.I.	C.G.	H.G.
22.0	99.6	65.9	At2g40900	818687	nodulin MtN21 family protein	F:unknown;P:unknown;C:membrane;BOPAM	O.I.	C.G.	H.G.
21.9	99.6	59.7	At2g29750	817525	UGT71C1 (UDP-GLUCOSYL TRANSFERASE 71C1)	F:quercetin 3'-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF	O.I.	C.G.	H.G.
21.7	99.6	19.0	At2g19060	816423	GDSL-motif lipase/hydrolase family protein	F:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
21.2	99.6	24.6	At1g78120	844148	tetratricopeptide repeat (TPR)-containing protein	F:binding;P:unknown;C:mitochondrion;MOBFPA	O.I.	C.G.	H.G.
21.0	99.6	61.4	At5g43520	834372	DC1 domain-containing protein	F:unknown;P:unknown;C:unknown;POMF	O.I.	C.G.	H.G.
21.0	99.6	61.0	At5g61340	836255	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PB	O.I.	C.G.	H.G.
21.0	99.6	37.5	At5g10210	830885	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
21.0	99.6	14.8	At4g36060	829762	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus, chloroplast, cytoplasm;PMOBF	O.I.	C.G.	H.G.
20.1	99.6	119.1	At5g06630	830551	proline-rich extensin-like family protein	F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVA	O.I.	C.G.	H.G.
19.9	99.6	37.1	At1g10380	837577	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
19.8	99.6	25.9	At5g25160	832587	ZFP3 (ZINC FINGER PROTEIN 3)	Encodes a zinc finger protein containing only a single zinc finger.	O.I.	C.G.	H.G.
19.4	99.6	29.1	At1g53680	841805	ATGSTU28 (GLUTATHIONE S-TRANSFERASE TAU 28)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
19.3	99.6	93.0	At2g03090	814838	ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)	member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
19.2	99.6	40.7	At3g45700	823712	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;PMBOF	O.I.	C.G.	H.G.
19.0	99.5	54.7	At2g04800	815024	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P	O.I.	C.G.	H.G.
18.9	99.5	88.0	At3g63200	825495	PLP9 (PATATIN-LIKE PROTEIN 9)	F:nutrient reservoir activity;P:metabolic process, lipid metabolic process;C:cellular_component unknown;BPMOF	O.I.	C.G.	H.G.
18.9	99.5	74.6	At3g25930	822190	universal stress protein (USP) family protein	F:molecular_function unknown;P:response to stress;C:cellular_component unknown;P	O.I.	C.G.	H.G.
18.7	99.5	106.3	At5g06640	830552	proline-rich extensin-like family protein	F:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MFPOBVA	O.I.	C.G.	H.G.
18.7	99.5	60.0	At2g22510	816784	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMBVFA	O.I.	C.G.	H.G.
18.6	99.5	100.8	At3g23430	821924	PHO1 (phosphate 1)	mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains.	O.I.	C.G.	H.G.
18.5	99.5	12.9	At1g11450	837687	nodulin MtN21 family protein	F:unknown;P:unknown;C:endomembrane system, membrane;PBOAM	O.I.	C.G.	H.G.
18.4	99.5	34.7	At2g01950	814726	BRL2 (BRI1-LIKE 2)	Encodes a leucine rich repeat receptor kinase and associated with provascular/procambial cells. Similar to BRI, brassinosteroid receptor protein.	O.I.	C.G.	H.G.
18.0	99.5	13.1	At1g67710	843096	ARR11 (RESPONSE REGULATOR 11)	Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.	O.I.	C.G.	H.G.
17.8	99.5	121.6	At3g62040	825377	catalytic/ hydrolase	F:hydrolase activity, catalytic activity;P:metabolic process;C:unknown;OBPFA	O.I.	C.G.	H.G.
17.8	99.5	105.6	At4g28250	828940	ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3)	putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
17.6	99.5	167.8	At1g15380	838107	lactoylglutathione lyase family protein / glyoxalase I family protein	F:lactoylglutathione lyase activity;P:carbohydrate metabolic process;C:cellular_component unknown;BPOMFA	O.I.	C.G.	H.G.
17.6	99.5	85.3	At4g01450	828176	nodulin MtN21 family protein	F:unknown;P:unknown;C:endomembrane system, membrane;PBOM	O.I.	C.G.	H.G.
17.6	99.5	14.5	At4g32860	829422	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
17.5	99.5	34.3	At3g59690	825138	IQD13 (IQ-domain 13)	F:calmodulin binding;P:unknown;C:plasma membrane;POMVFB	O.I.	C.G.	H.G.
17.3	99.5	126.6	At2g24980	817037	proline-rich extensin-like family protein	F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MFPOBVA	O.I.	C.G.	H.G.
17.3	99.5	56.0	At4g17800	827502	DNA-binding protein-related	F:unknown;P:biological_process unknown;C:cellular_component unknown;PBMOF	O.I.	C.G.	H.G.
17.0	99.5	66.1	At3g06390	819813	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
16.6	99.5	74.6	At4g20390	827787	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
16.3	99.5	365.2	At1g70850	843422	MLP34 (MLP-LIKE PROTEIN 34)	F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
16.3	99.5	19.5	At3g02850	821052	SKOR	member of Stelar K+ outward rectifying channel (SKOR) family. Mediates the delivery of K+ from stelar cells to the xylem in the roots towards the shoot. mRNA accumulation is modulated by abscisic acid. K+ gating activity is modulated by external and internal K+.	O.I.	C.G.	H.G.
15.9	99.5	98.5	At5g65210	836646	TGA1	F:transcription factor activity, calmodulin binding, DNA binding;P:defense response to bacterium;C:nucleus;POM	O.I.	C.G.	H.G.
15.8	99.5	65.7	At2g37460	818323	nodulin MtN21 family protein	F:unknown;P:unknown;C:membrane;BPOAMF	O.I.	C.G.	H.G.
15.7	99.5	320.9	At4g12550	826868	AIR1	isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus.	O.I.	C.G.	H.G.
15.6	99.5	27.3	At3g25710	822159	BHLH32 (BASIC HELIX-LOOP-HELIX 32)	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
15.6	99.5	11.7	At2g25090	817047	CIPK16 (CBL-INTERACTING PROTEIN KINASE 16)	Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.18), which has also been reported as a member of the CBL-interacting protein kinases (CIPK16).	O.I.	C.G.	H.G.
15.4	99.5	187.2	At1g06640	837173	2-oxoglutarate-dependent dioxygenase, putative	encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase	O.I.	C.G.	H.G.
15.4	99.5	124.2	At5g59780	836099	MYB59 (MYB DOMAIN PROTEIN 59)	Encodes a putative transcription factor (MYB59).	O.I.	C.G.	H.G.
15.3	99.4	88.8	At4g12080	826816	DNA-binding family protein	F:DNA binding;P:unknown;C:mitochondrion, nucleolus, nucleus, cytoplasm;PMFOBV	O.I.	C.G.	H.G.
15.3	99.4	17.5	At2g22850	816816	AtbZIP6 (Arabidopsis thaliana basic leucine-zipper 6)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POMF	O.I.	C.G.	H.G.
15.3	99.4	9.0	At2g22920	816823	serine carboxypeptidase S10 family protein	F:serine-type carboxypeptidase activity;P:proteolysis;C:plant-type cell wall;PMFBO	O.I.	C.G.	H.G.
15.1	99.4	21.6	At1g80690	844408	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF	O.I.	C.G.	H.G.
15.1	99.4	5.8	At2g13910	3768458	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
14.6	99.4	259.8	At2g01520	814681	MLP328 (MLP-LIKE PROTEIN 328)	F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
14.6	99.4	50.9	At5g44550	834482	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
14.5	99.4	109.1	At5g10580	830923	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPO	O.I.	C.G.	H.G.
14.4	99.4	58.4	At5g43180	834336	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBO	O.I.	C.G.	H.G.
14.3	99.4	72.1	At1g13300	837890	myb family transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POVBMF	O.I.	C.G.	H.G.
14.3	99.4	26.5	At4g18510	827583	CLE2 (CLAVATA3/ESR-RELATED)	CLE2, putative ligand, member of large gene family homologous to Clavata3	O.I.	C.G.	H.G.
14.1	99.4	19.7	At3g22800	821851	leucine-rich repeat family protein / extensin family protein	F:structural constituent of cell wall, protein binding;P:unknown;C:endomembrane system;MPBOFVA	O.I.	C.G.	H.G.
14.0	99.4	271.3	At2g01530	814682	MLP329 (MLP-LIKE PROTEIN 329)	F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
13.8	99.4	184.8	At5g43780	834400	APS4	sulfate adenylyltransferase, ATP sulfurylase	O.I.	C.G.	H.G.
13.8	99.4	25.6	At1g71870	843518	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
13.8	99.4	17.1	At4g35030	829655	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVA	O.I.	C.G.	H.G.
13.7	99.4	112.0	At4g35060	829658	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P	O.I.	C.G.	H.G.
13.6	99.4	54.2	At4g20070	827752	ATAAH (Arabidopsis thaliana Allantoate Amidohydrolase)	The gene encoding Arabidopsis thaliana Allantoate Amidohydrolase (AtAAH)which catalyzes the allantoate deiminase reaction (EC 3.5.3.9)is expressed in all parts of the plant being consistent with a function in purine turnover in Arabidopsis.	O.I.	C.G.	H.G.
13.6	99.4	10.4	At4g18630	827597	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PMOF	O.I.	C.G.	H.G.
13.5	99.4	34.1	At4g13235	826940	EDA21 (embryo sac development arrest 21)	Encodes a defensin-like (DEFL) family protein.	O.I.	C.G.	H.G.
13.4	99.4	15.4	At1g71692	843497	AGL12 (AGAMOUS-LIKE 12)	Encodes a member of the MADS box family of transcription factors. Involved in root cell differentiation and flowering time. Loss of function mutations have abnormal cellular differentiation in the roots and are late flowering. AGL12 along with AGL14, and AGL17 is preferentially expressed in root tissues and represent the only characterized MADS box genes expressed in roots.	O.I.	C.G.	H.G.
13.4	99.4	11.9	At4g20230	827770	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PFO	O.I.	C.G.	H.G.
13.3	99.4	170.2	At1g44800	841044	nodulin MtN21 family protein	F:molecular_function unknown;P:unknown;C:membrane;BOPAM	O.I.	C.G.	H.G.
13.3	99.4	62.2	At3g16340	820881	PDR1	F:ATPase activity, coupled to transmembrane movement of substances;P:multidrug transport;C:plasma membrane;BOMFAPV	O.I.	C.G.	H.G.
13.3	99.4	38.0	At1g21140	838710	nodulin, putative	F:unknown;P:biological_process unknown;C:unknown;BOPFA	O.I.	C.G.	H.G.
13.1	99.4	13.5	At4g03500	827731	ankyrin repeat family protein	F:protein binding;P:unknown;C:unknown;MOFPBVA	O.I.	C.G.	H.G.
12.9	99.3	87.0	At1g19600	838547	pfkB-type carbohydrate kinase family protein	F:kinase activity;P:D-ribose catabolic process;C:cellular_component unknown;BOMPAF	O.I.	C.G.	H.G.
12.9	99.3	33.6	At4g11210	826723	disease resistance-responsive family protein / dirigent family protein	F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
12.9	99.3	29.6	At4g31875	829317	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
12.9	99.3	26.0	At2g35270	818094	DNA-binding protein-related	F:unknown;P:biological_process unknown;C:cellular_component unknown;PMBOFVA	O.I.	C.G.	H.G.
12.9	99.3	18.5	At5g06800	830570	myb family transcription factor	F:transcription factor activity;P:regulation of transcription;C:unknown;POFM	O.I.	C.G.	H.G.
12.9	99.3	4.3	At5g54700	835559	ankyrin repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;PMOBF	O.I.	C.G.	H.G.
12.8	99.3	152.4	At1g35580	840454	CINV1 (cytosolic invertase 1)	Encodes a protein with cytosolic (alkaline/neutral) invertase activity. The protein was shown to interact with PIP5K9.	O.I.	C.G.	H.G.
12.8	99.3	99.9	At3g54260	824593	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PM	O.I.	C.G.	H.G.
12.8	99.3	49.7	At3g27170	822336	CLC-B (CHLORIDE CHANNEL B)	member of Anion channel protein family	O.I.	C.G.	H.G.
12.8	99.3	45.5	At1g01640	839534	speckle-type POZ protein-related	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOVF	O.I.	C.G.	H.G.

Back to the CoP portal site

Back to the KAGIANA project homepage

GSM ID	GSM133131
Assay name	S1500_0H_A
GSE experiment	GSE5688: AtGenExpress: Response to sulfate limitation

Microarray experiments to specifically-expressed genes

GSM ID GSM133131 Assay name S1500_0H_A GSE experiment GSE5688: AtGenExpress: Response to sulfate limitation

GSM ID GSM133131

Assay name S1500_0H_A

GSE experiment GSE5688: AtGenExpress: Response to sulfate limitation