Microarray experiments to specifically-expressed genes

GSM ID GSM133099
Assay name JD AT+EO COL WT EXP2 24H INFECTED
GSE experiment GSE5686: AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
14.099.4208.7At5g44420834469PDF1.2Encodes an ethylene- and jasmonate-responsive plant defensin. mRNA levels are not responsive to salicylic acid treatment; although jasmonate and salicylic acid can act synergistically to enhance the expression of this gene. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.O.I.C.G.H.G.
13.099.411.9At5g11610831033exostosin family proteinF:catalytic activity;P:biological_process unknown;C:endomembrane system, membrane;PMOBFO.I.C.G.H.G.
12.599.348.3At2g39920818579acid phosphatase class B family proteinF:acid phosphatase activity;P:response to cadmium ion;C:cellular_component unknown;PBOO.I.C.G.H.G.
12.499.3201.7At2g26020817143PDF1.2b (plant defensin 1.2b)Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.O.I.C.G.H.G.
12.499.324.6At4g21380827890ARK3 (A. THALIANA RECEPTOR KINASE 3)encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.O.I.C.G.H.G.
12.299.3227.5At1g73600843694methyltransferase/ phosphoethanolamine N-methyltransferaseF:methyltransferase activity, phosphoethanolamine N-methyltransferase activity;P:metabolic process;C:unknown;BOFAPMVO.I.C.G.H.G.
11.299.226.5At2g45560819164CYP76C1cytochrome P450 monooxygenaseO.I.C.G.H.G.
10.799.2233.9At4g26530828759fructose-bisphosphate aldolase, putativeF:fructose-bisphosphate aldolase activity;P:glycolysis, metabolic process;C:chloroplast;OMBPFO.I.C.G.H.G.
10.599.238.4At1g53870841824unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
10.499.241.7At1g73750843710-F:unknown;P:unknown;C:unknown;PBMOO.I.C.G.H.G.
10.299.256.9At1g68600843190unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BPFOO.I.C.G.H.G.
9.999.18.6At1g77960844131unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVO.I.C.G.H.G.
9.899.1143.6At4g14400827085ACD6 (ACCELERATED CELL DEATH 6)encodes a novel protein with putative ankyrin and transmembrane regions. It is a member of one of the largest uncharacterized gene families in higher plants. The gene is involved in resistance to Pseudomonas syringae.O.I.C.G.H.G.
9.599.171.3At1g08550837377NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1)Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complexO.I.C.G.H.G.
9.599.140.1At2g23840816916HNH endonuclease domain-containing proteinF:endonuclease activity, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;OBVPAO.I.C.G.H.G.
9.399.122.8At3g62750825450BGLU8 (BETA GLUCOSIDASE 8)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:vacuole;BOPMFAO.I.C.G.H.G.
8.899.041.0At2g43010818903PIF4 (phytochrome interacting factor 4)Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.O.I.C.G.H.G.
8.799.0141.8At4g19170827655NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4)chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenaseO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage