CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133098

Assay name JD AT+EO COL WT EXP2 18H UNINFECTED

GSE experiment GSE5686: AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
22.3 99.6 307.6 At1g73600 843694 methyltransferase/ phosphoethanolamine N-methyltransferase F:methyltransferase activity, phosphoethanolamine N-methyltransferase activity;P:metabolic process;C:unknown;BOFAPMV O.I. C.G. H.G.
15.3 99.4 12.8 At5g11610 831033 exostosin family protein F:catalytic activity;P:biological_process unknown;C:endomembrane system, membrane;PMOBF O.I. C.G. H.G.
15.1 99.4 69.3 At1g68600 843190 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;BPFO O.I. C.G. H.G.
12.6 99.3 32.5 At5g01790 831868 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
12.4 99.3 169.1 At4g19170 827655 NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase O.I. C.G. H.G.
11.1 99.2 43.1 At2g23840 816916 HNH endonuclease domain-containing protein F:endonuclease activity, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;OBVPA O.I. C.G. H.G.
10.5 99.2 50.3 At1g03310 839531 isoamylase, putative / starch debranching enzyme, putative Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. It has been postulated that AtISA2 interacts with AtISA1 to form the Iso1 complex. O.I. C.G. H.G.
10.4 99.2 20.0 At1g29720 839850 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
10.3 99.2 53.7 At5g45820 834622 CIPK20 (CBL-INTERACTING PROTEIN KINASE 20) Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain. O.I. C.G. H.G.
9.6 99.1 64.3 At3g44450 823570 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
9.5 99.1 26.7 At4g14240 827065 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
9.3 99.1 173.3 At1g67870 843115 glycine-rich protein F:unknown;P:biological_process unknown;C:unknown;MOBPFAV O.I. C.G. H.G.
9.3 99.1 99.8 At5g14970 831349 unknown protein F:unknown;P:unknown;C:unknown;BOP O.I. C.G. H.G.
9.0 99.1 27.8 At5g59130 836031 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM O.I. C.G. H.G.
9.0 99.1 24.0 At2g40670 818662 ARR16 (ARABIDOPSIS RESPONSE REGULATOR 16) response regulator 16 O.I. C.G. H.G.
8.8 99.0 142.5 At3g44990 823634 XTR8 (XYLOGLUCAN ENDO-TRANSGLYCOSYLASE-RELATED 8) xyloglucan endo-transglycosylase O.I. C.G. H.G.
8.8 99.0 50.2 At4g12980 826910 auxin-responsive protein, putative F:unknown;P:multicellular organismal development;C:membrane;PMFOB O.I. C.G. H.G.
8.8 99.0 49.5 At5g22300 832290 NIT4 (NITRILASE 4) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway. O.I. C.G. H.G.

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