CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133095

Assay name JD AT+EO COL WT EXP2 12H INFECTED

GSE experiment GSE5686: AtGenExpress: Pathogen Series: Response to Erysiphe orontii infection

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
17.6 99.5 31.4 At3g62750 825450 BGLU8 (BETA GLUCOSIDASE 8) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:vacuole;BOPMFA O.I. C.G. H.G.
12.4 99.3 48.0 At2g39920 818579 acid phosphatase class B family protein F:acid phosphatase activity;P:response to cadmium ion;C:cellular_component unknown;PBO O.I. C.G. H.G.
12.0 99.3 47.8 At2g43010 818903 PIF4 (phytochrome interacting factor 4) Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB. O.I. C.G. H.G.
11.4 99.3 34.2 At3g15570 820797 phototropic-responsive NPH3 family protein F:signal transducer activity;P:response to light stimulus;C:cellular_component unknown;P O.I. C.G. H.G.
10.9 99.2 55.4 At5g45820 834622 CIPK20 (CBL-INTERACTING PROTEIN KINASE 20) Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain. O.I. C.G. H.G.
10.8 99.2 42.4 At1g73750 843710 - F:unknown;P:unknown;C:unknown;PBMO O.I. C.G. H.G.
10.4 99.2 74.8 At1g08550 837377 NPQ1 (NON-PHOTOCHEMICAL QUENCHING 1) Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex O.I. C.G. H.G.
10.3 99.2 25.4 At2g45560 819164 CYP76C1 cytochrome P450 monooxygenase O.I. C.G. H.G.
9.8 99.1 20.5 At5g02180 831862 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:chloroplast, membrane;MPFOBAV O.I. C.G. H.G.
9.4 99.1 218.0 At3g18080 821333 BGLU44 (B-S GLUCOSIDASE 44) F:in 6 functions;P:carbohydrate metabolic process;C:cytosolic ribosome, cell wall, plant-type cell wall;BOPMFA O.I. C.G. H.G.
9.2 99.1 217.2 At4g26530 828759 fructose-bisphosphate aldolase, putative F:fructose-bisphosphate aldolase activity;P:glycolysis, metabolic process;C:chloroplast;OMBPF O.I. C.G. H.G.
8.9 99.0 36.1 At3g53800 824547 armadillo/beta-catenin repeat family protein F:binding;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
8.7 99.0 98.3 At4g04330 825753 unknown protein F:unknown;P:unknown;C:unknown;BPO O.I. C.G. H.G.
8.7 99.0 88.5 At1g70820 843419 phosphoglucomutase, putative / glucose phosphomutase, putative F:intramolecular transferase activity, phosphotransferases;P:carbohydrate metabolic process;C:chloroplast;BOAMPF O.I. C.G. H.G.
8.7 99.0 67.6 At4g12310 826840 CYP706A5 member of CYP706A O.I. C.G. H.G.

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