CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM133048

Assay name 2790

GSE experiment GSE5685: AtGenExpress: Pathogen Series: Pseudomonas half leaf injection

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
120.2 99.9 44.3 At1g21240 838719 WAK3 (wall associated kinase 3) encodes a wall-associated kinase O.I. C.G. H.G.
60.3 99.8 57.4 At3g25010 822092 AtRLP41 (Receptor Like Protein 41) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
58.6 99.8 76.8 At3g11010 820272 AtRLP34 (Receptor Like Protein 34) F:protein binding, kinase activity;P:signal transduction, defense response;C:cellular_component unknown;PMOBFAV O.I. C.G. H.G.
53.9 99.8 97.8 At2g32680 817828 AtRLP23 (Receptor Like Protein 23) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
49.8 99.8 170.1 At4g23140 828413 CRK6 (CYSTEINE-RICH RLK 6) Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) O.I. C.G. H.G.
43.8 99.8 62.6 At1g56150 842068 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
38.1 99.8 47.3 At5g59670 836088 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
34.5 99.7 151.6 At5g18470 831965 curculin-like (mannose-binding) lectin family protein F:sugar binding;P:biological_process unknown;C:plant-type cell wall;P O.I. C.G. H.G.
33.3 99.7 57.8 At4g04540 825785 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
31.7 99.7 49.8 At5g60800 836201 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:unknown;POMFBVA O.I. C.G. H.G.
31.4 99.7 53.6 At1g58420 842211 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
30.3 99.7 25.9 At3g07520 819940 GLR1.4 (GLUTAMATE RECEPTOR 1.4) member of Putative ligand-gated ion channel subunit family. Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis. O.I. C.G. H.G.
29.2 99.7 45.4 At3g12830 820465 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
27.7 99.7 56.4 At3g48090 823964 EDS1 (enhanced disease susceptibility 1) Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases. O.I. C.G. H.G.
26.2 99.7 90.2 At2g17040 816209 anac036 (Arabidopsis NAC domain containing protein 36) F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;P O.I. C.G. H.G.
24.6 99.6 37.3 At4g04500 825780 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
24.4 99.6 92.2 At1g10340 837573 ankyrin repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA O.I. C.G. H.G.
24.4 99.6 32.6 At3g23110 821886 AtRLP37 (Receptor Like Protein 37) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
24.3 99.6 111.3 At1g76960 844031 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
24.1 99.6 26.7 At1g72240 843556 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
24.0 99.6 10.7 At3g24900 822088 AtRLP39 (Receptor Like Protein 39) F:protein binding;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
23.8 99.6 49.7 At1g73805 843716 calmodulin binding F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
23.3 99.6 21.1 At1g17610 838337 disease resistance protein-related F:transmembrane receptor activity, ATP binding;P:signal transduction, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PBOMF O.I. C.G. H.G.
22.6 99.6 58.2 At4g00700 828031 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF O.I. C.G. H.G.
22.4 99.6 47.9 At5g60900 836211 RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1) Encodes a receptor-like protein kinase. O.I. C.G. H.G.
21.5 99.6 65.4 At3g47480 823902 calcium-binding EF hand family protein F:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOB O.I. C.G. H.G.
21.0 99.6 67.9 At1g35230 840412 AGP5 (ARABINOGALACTAN-PROTEIN 5) Encodes arabinogalactan-protein (AGP5). O.I. C.G. H.G.
20.6 99.6 77.0 At5g39670 833963 calcium-binding EF hand family protein F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOB O.I. C.G. H.G.
20.3 99.6 108.3 At2g04450 814985 ATNUDT6 (Arabidopsis thaliana Nudix hydrolase homolog 6) F:ADP-ribose diphosphatase activity, hydrolase activity, NAD or NADH binding;P:response to other organism;C:cytosol;OBMPAFV O.I. C.G. H.G.
20.3 99.6 20.2 At3g14470 820670 disease resistance protein (NBS-LRR class), putative F:protein binding, ATP binding;P:defense response, apoptosis;C:endomembrane system;PMBOFA O.I. C.G. H.G.
20.1 99.6 39.3 At4g23220 828421 kinase F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
19.9 99.6 229.1 At1g21250 838721 WAK1 (CELL WALL-ASSOCIATED KINASE) cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component. O.I. C.G. H.G.
19.9 99.6 29.1 At2g29120 817460 ATGLR2.7 member of Putative ligand-gated ion channel subunit family O.I. C.G. H.G.
18.8 99.5 70.2 At1g21270 838723 WAK2 cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. O.I. C.G. H.G.
18.5 99.5 168.9 At3g60420 825213 - F:unknown;P:unknown;C:cellular_component unknown;OBFPM O.I. C.G. H.G.
18.4 99.5 33.5 At5g64000 836521 SAL2 3'(2'),5'-bisphosphate nucleotidase O.I. C.G. H.G.
18.3 99.5 229.4 At3g50480 824212 HR4 (HOMOLOG OF RPW8 4) Homolog of RPW8 O.I. C.G. H.G.
17.9 99.5 94.3 At3g04210 819576 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PBMO O.I. C.G. H.G.
17.7 99.5 227.3 At2g24850 817022 TAT3 (TYROSINE AMINOTRANSFERASE 3) Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid. O.I. C.G. H.G.
17.3 99.5 74.2 At1g68600 843190 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;BPFO O.I. C.G. H.G.
17.2 99.5 191.7 At5g10380 830902 RING1 Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators. O.I. C.G. H.G.
17.2 99.5 24.8 At4g23610 828461 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
17.0 99.5 38.2 At4g03450 827913 ankyrin repeat family protein F:protein binding;P:unknown;C:unknown;MOPFBVA O.I. C.G. H.G.
16.9 99.5 33.3 At4g02420 828035 lectin protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
16.8 99.5 15.9 At4g04220 825737 AtRLP46 (Receptor Like Protein 46) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
16.8 99.5 9.0 At4g13810 827015 AtRLP47 (Receptor Like Protein 47) F:protein binding;P:signal transduction, defense response;C:unknown;PMOBFAV O.I. C.G. H.G.
16.7 99.5 58.1 At3g60540 825225 sec61beta family protein F:protein transporter activity;P:protein transport;C:unknown;MFPO O.I. C.G. H.G.
16.6 99.5 151.6 At5g48380 834892 leucine-rich repeat family protein / protein kinase family protein F:protein binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
16.6 99.5 58.0 At4g11890 826796 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
16.3 99.5 108.5 At3g45860 823729 receptor-like protein kinase, putative F:kinase activity;P:defense response;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
16.0 99.5 77.6 At4g10500 826642 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:unknown;POBFM O.I. C.G. H.G.
15.8 99.5 293.5 At2g31880 817746 leucine-rich repeat transmembrane protein kinase, putative Encodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs. O.I. C.G. H.G.
15.8 99.5 172.3 At1g08450 837365 CRT3 (CALRETICULIN 3) Encodes calreticulin CRT3. O.I. C.G. H.G.
15.7 99.5 38.0 At3g52430 824408 PAD4 (PHYTOALEXIN DEFICIENT 4) Encodes a lipase-like gene that is important for salicylic acid signaling and function in resistance (R) gene-mediated and basal plant disease resistance. PAD4 can interact directly with EDS1, another disease resistance signaling protein. Expressed at elevated level in response to green peach aphid (GPA) feeding, and modulates the GPA feeding-induced leaf senescence through a mechanism that doesn't require camalexin synthesis and salicylic acid (SA) signaling. O.I. C.G. H.G.
15.6 99.5 143.1 At5g23240 832388 DNAJ heat shock N-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:chloroplast;BOMPFAV O.I. C.G. H.G.
15.4 99.5 13.5 At4g14610 3770075 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
15.3 99.4 49.6 At1g48210 841241 serine/threonine protein kinase, putative F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
15.2 99.4 76.3 At1g73800 - - O.I. C.G. H.G.
15.2 99.4 68.3 At1g74710 843810 isochorismate synthase 1 (ICS1) / isochorismate mutase Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870). O.I. C.G. H.G.
15.2 99.4 32.0 At1g35210 840410 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO O.I. C.G. H.G.
15.1 99.4 14.7 At4g22980 828397 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOBA O.I. C.G. H.G.
15.0 99.4 105.6 At3g11660 820338 NHL1 encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive. O.I. C.G. H.G.
14.9 99.4 28.5 At1g29240 839798 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PF O.I. C.G. H.G.
14.7 99.4 176.2 At4g14400 827085 ACD6 (ACCELERATED CELL DEATH 6) encodes a novel protein with putative ankyrin and transmembrane regions. It is a member of one of the largest uncharacterized gene families in higher plants. The gene is involved in resistance to Pseudomonas syringae. O.I. C.G. H.G.
14.7 99.4 55.8 At5g47070 834753 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
14.5 99.4 313.9 At3g57260 824893 BGL2 (BETA-1,3-GLUCANASE 2) beta 1,3-glucanase O.I. C.G. H.G.
14.5 99.4 88.1 At1g35710 840475 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
14.5 99.4 40.6 At4g23150 828414 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
14.4 99.4 184.1 At5g24530 832524 DMR6 (DOWNY MILDEW RESISTANT 6) Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew. O.I. C.G. H.G.
14.4 99.4 56.1 At1g66880 843006 serine/threonine protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
14.3 99.4 55.3 At5g54610 835550 ANK (ankyrin) Induced in response to Salicylic acid. Belongs to the ankyrin repeat protein family. O.I. C.G. H.G.
14.2 99.4 10.8 At2g29110 817459 ATGLR2.8 member of Putative ligand-gated ion channel subunit family O.I. C.G. H.G.
14.1 99.4 116.9 At5g52760 835353 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P O.I. C.G. H.G.
14.1 99.4 25.1 At1g67470 843068 protein kinase family protein F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVA O.I. C.G. H.G.
14.0 99.4 72.2 At2g40270 818619 protein kinase family protein F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
14.0 99.4 19.6 At3g48080 823963 lipase class 3 family protein / disease resistance protein-related F:lipase activity, triacylglycerol lipase activity, signal transducer activity;P:lipid metabolic process;C:cellular_component unknown;POB O.I. C.G. H.G.
13.9 99.4 57.2 At5g52810 835358 ornithine cyclodeaminase/mu-crystallin family protein F:structural constituent of eye lens, binding, catalytic activity;P:arginine catabolic process to glutamate, nopaline catabolic process, metabolic process, octopine catabolic process;C:chloroplast;BOMAFP O.I. C.G. H.G.
13.8 99.4 47.2 At1g53230 841756 TCP3 Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. O.I. C.G. H.G.
13.7 99.4 44.0 At3g28540 822484 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOMFPAV O.I. C.G. H.G.
13.7 99.4 18.3 At1g72280 843560 AERO1 (Arabidopsis endoplasmic reticulum oxidoreductins 1) endoplasmic reticulum oxidoreductin O.I. C.G. H.G.
13.6 99.4 18.6 At3g44350 823560 anac061 (Arabidopsis NAC domain containing protein 61) F:transcription factor activity;P:multicellular organismal development, response to chitin, regulation of transcription;C:cellular_component unknown;P O.I. C.G. H.G.
13.5 99.4 193.7 At4g14365 827080 zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVA O.I. C.G. H.G.
13.4 99.4 79.1 At5g52540 835330 unknown protein F:unknown;P:unknown;C:chloroplast envelope;BOPA O.I. C.G. H.G.
13.4 99.4 22.2 At2g14080 815893 disease resistance protein (TIR-NBS-LRR class), putative F:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PMOBFAV O.I. C.G. H.G.
13.3 99.4 36.3 At1g24140 839026 matrixin family protein F:metallopeptidase activity, metalloendopeptidase activity;P:proteolysis, metabolic process;C:anchored to membrane;MOPBVAF O.I. C.G. H.G.
13.3 99.4 14.4 At5g45000 834531 transmembrane receptor F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBO O.I. C.G. H.G.
13.2 99.4 38.7 At5g25250 832596 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPAV O.I. C.G. H.G.
13.2 99.4 27.8 At3g11650 820337 NHL2 Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus and spermine. Overexpression of the gene induces the expression of PR-1 gene and shows light-dependent 'speck disease-like' symptom on leaves. The gene product is localized to the chloroplast O.I. C.G. H.G.
13.1 99.4 24.5 At3g52710 824437 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P O.I. C.G. H.G.
13.1 99.4 12.4 At2g36470 818221 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMO O.I. C.G. H.G.
13.0 99.4 44.5 At1g67970 843125 AT-HSFA8 member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
13.0 99.4 35.0 At3g07650 819956 COL9 (CONSTANS-LIKE 9) This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO. O.I. C.G. H.G.
13.0 99.4 11.4 At4g38560 830013 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBAFV O.I. C.G. H.G.
12.9 99.3 218.9 At5g10760 830943 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast;PMFO O.I. C.G. H.G.
12.7 99.3 26.7 At1g79110 844252 protein binding / zinc ion binding F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOVF O.I. C.G. H.G.
12.7 99.3 20.4 At3g26230 822224 CYP71B24 putative cytochrome P450 O.I. C.G. H.G.
12.6 99.3 60.2 At1g55910 842041 ZIP11 (ZINC TRANSPORTER 11 PRECURSOR) member of Putative zinc transporter ZIP2 - like family O.I. C.G. H.G.
12.6 99.3 22.0 At2g23200 816852 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
12.3 99.3 41.7 At1g68585 843188 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
12.2 99.3 124.9 At2g44210 819029 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PFB O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
120.2	99.9	44.3	At1g21240	838719	WAK3 (wall associated kinase 3)	encodes a wall-associated kinase	O.I.	C.G.	H.G.
60.3	99.8	57.4	At3g25010	822092	AtRLP41 (Receptor Like Protein 41)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
58.6	99.8	76.8	At3g11010	820272	AtRLP34 (Receptor Like Protein 34)	F:protein binding, kinase activity;P:signal transduction, defense response;C:cellular_component unknown;PMOBFAV	O.I.	C.G.	H.G.
53.9	99.8	97.8	At2g32680	817828	AtRLP23 (Receptor Like Protein 23)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
49.8	99.8	170.1	At4g23140	828413	CRK6 (CYSTEINE-RICH RLK 6)	Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)	O.I.	C.G.	H.G.
43.8	99.8	62.6	At1g56150	842068	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
38.1	99.8	47.3	At5g59670	836088	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
34.5	99.7	151.6	At5g18470	831965	curculin-like (mannose-binding) lectin family protein	F:sugar binding;P:biological_process unknown;C:plant-type cell wall;P	O.I.	C.G.	H.G.
33.3	99.7	57.8	At4g04540	825785	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
31.7	99.7	49.8	At5g60800	836201	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:unknown;POMFBVA	O.I.	C.G.	H.G.
31.4	99.7	53.6	At1g58420	842211	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
30.3	99.7	25.9	At3g07520	819940	GLR1.4 (GLUTAMATE RECEPTOR 1.4)	member of Putative ligand-gated ion channel subunit family. Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis.	O.I.	C.G.	H.G.
29.2	99.7	45.4	At3g12830	820465	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
27.7	99.7	56.4	At3g48090	823964	EDS1 (enhanced disease susceptibility 1)	Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases.	O.I.	C.G.	H.G.
26.2	99.7	90.2	At2g17040	816209	anac036 (Arabidopsis NAC domain containing protein 36)	F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;P	O.I.	C.G.	H.G.
24.6	99.6	37.3	At4g04500	825780	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
24.4	99.6	92.2	At1g10340	837573	ankyrin repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA	O.I.	C.G.	H.G.
24.4	99.6	32.6	At3g23110	821886	AtRLP37 (Receptor Like Protein 37)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
24.3	99.6	111.3	At1g76960	844031	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
24.1	99.6	26.7	At1g72240	843556	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
24.0	99.6	10.7	At3g24900	822088	AtRLP39 (Receptor Like Protein 39)	F:protein binding;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
23.8	99.6	49.7	At1g73805	843716	calmodulin binding	F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
23.3	99.6	21.1	At1g17610	838337	disease resistance protein-related	F:transmembrane receptor activity, ATP binding;P:signal transduction, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PBOMF	O.I.	C.G.	H.G.
22.6	99.6	58.2	At4g00700	828031	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF	O.I.	C.G.	H.G.
22.4	99.6	47.9	At5g60900	836211	RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1)	Encodes a receptor-like protein kinase.	O.I.	C.G.	H.G.
21.5	99.6	65.4	At3g47480	823902	calcium-binding EF hand family protein	F:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOB	O.I.	C.G.	H.G.
21.0	99.6	67.9	At1g35230	840412	AGP5 (ARABINOGALACTAN-PROTEIN 5)	Encodes arabinogalactan-protein (AGP5).	O.I.	C.G.	H.G.
20.6	99.6	77.0	At5g39670	833963	calcium-binding EF hand family protein	F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOB	O.I.	C.G.	H.G.
20.3	99.6	108.3	At2g04450	814985	ATNUDT6 (Arabidopsis thaliana Nudix hydrolase homolog 6)	F:ADP-ribose diphosphatase activity, hydrolase activity, NAD or NADH binding;P:response to other organism;C:cytosol;OBMPAFV	O.I.	C.G.	H.G.
20.3	99.6	20.2	At3g14470	820670	disease resistance protein (NBS-LRR class), putative	F:protein binding, ATP binding;P:defense response, apoptosis;C:endomembrane system;PMBOFA	O.I.	C.G.	H.G.
20.1	99.6	39.3	At4g23220	828421	kinase	F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
19.9	99.6	229.1	At1g21250	838721	WAK1 (CELL WALL-ASSOCIATED KINASE)	cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component.	O.I.	C.G.	H.G.
19.9	99.6	29.1	At2g29120	817460	ATGLR2.7	member of Putative ligand-gated ion channel subunit family	O.I.	C.G.	H.G.
18.8	99.5	70.2	At1g21270	838723	WAK2	cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.	O.I.	C.G.	H.G.
18.5	99.5	168.9	At3g60420	825213	-	F:unknown;P:unknown;C:cellular_component unknown;OBFPM	O.I.	C.G.	H.G.
18.4	99.5	33.5	At5g64000	836521	SAL2	3'(2'),5'-bisphosphate nucleotidase	O.I.	C.G.	H.G.
18.3	99.5	229.4	At3g50480	824212	HR4 (HOMOLOG OF RPW8 4)	Homolog of RPW8	O.I.	C.G.	H.G.
17.9	99.5	94.3	At3g04210	819576	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PBMO	O.I.	C.G.	H.G.
17.7	99.5	227.3	At2g24850	817022	TAT3 (TYROSINE AMINOTRANSFERASE 3)	Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid.	O.I.	C.G.	H.G.
17.3	99.5	74.2	At1g68600	843190	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;BPFO	O.I.	C.G.	H.G.
17.2	99.5	191.7	At5g10380	830902	RING1	Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators.	O.I.	C.G.	H.G.
17.2	99.5	24.8	At4g23610	828461	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
17.0	99.5	38.2	At4g03450	827913	ankyrin repeat family protein	F:protein binding;P:unknown;C:unknown;MOPFBVA	O.I.	C.G.	H.G.
16.9	99.5	33.3	At4g02420	828035	lectin protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
16.8	99.5	15.9	At4g04220	825737	AtRLP46 (Receptor Like Protein 46)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
16.8	99.5	9.0	At4g13810	827015	AtRLP47 (Receptor Like Protein 47)	F:protein binding;P:signal transduction, defense response;C:unknown;PMOBFAV	O.I.	C.G.	H.G.
16.7	99.5	58.1	At3g60540	825225	sec61beta family protein	F:protein transporter activity;P:protein transport;C:unknown;MFPO	O.I.	C.G.	H.G.
16.6	99.5	151.6	At5g48380	834892	leucine-rich repeat family protein / protein kinase family protein	F:protein binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
16.6	99.5	58.0	At4g11890	826796	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
16.3	99.5	108.5	At3g45860	823729	receptor-like protein kinase, putative	F:kinase activity;P:defense response;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
16.0	99.5	77.6	At4g10500	826642	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:unknown;POBFM	O.I.	C.G.	H.G.
15.8	99.5	293.5	At2g31880	817746	leucine-rich repeat transmembrane protein kinase, putative	Encodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs.	O.I.	C.G.	H.G.
15.8	99.5	172.3	At1g08450	837365	CRT3 (CALRETICULIN 3)	Encodes calreticulin CRT3.	O.I.	C.G.	H.G.
15.7	99.5	38.0	At3g52430	824408	PAD4 (PHYTOALEXIN DEFICIENT 4)	Encodes a lipase-like gene that is important for salicylic acid signaling and function in resistance (R) gene-mediated and basal plant disease resistance. PAD4 can interact directly with EDS1, another disease resistance signaling protein. Expressed at elevated level in response to green peach aphid (GPA) feeding, and modulates the GPA feeding-induced leaf senescence through a mechanism that doesn't require camalexin synthesis and salicylic acid (SA) signaling.	O.I.	C.G.	H.G.
15.6	99.5	143.1	At5g23240	832388	DNAJ heat shock N-terminal domain-containing protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:chloroplast;BOMPFAV	O.I.	C.G.	H.G.
15.4	99.5	13.5	At4g14610	3770075	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
15.3	99.4	49.6	At1g48210	841241	serine/threonine protein kinase, putative	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
15.2	99.4	76.3	At1g73800		-	-	O.I.	C.G.	H.G.
15.2	99.4	68.3	At1g74710	843810	isochorismate synthase 1 (ICS1) / isochorismate mutase	Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870).	O.I.	C.G.	H.G.
15.2	99.4	32.0	At1g35210	840410	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO	O.I.	C.G.	H.G.
15.1	99.4	14.7	At4g22980	828397	-	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMFOBA	O.I.	C.G.	H.G.
15.0	99.4	105.6	At3g11660	820338	NHL1	encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive.	O.I.	C.G.	H.G.
14.9	99.4	28.5	At1g29240	839798	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PF	O.I.	C.G.	H.G.
14.7	99.4	176.2	At4g14400	827085	ACD6 (ACCELERATED CELL DEATH 6)	encodes a novel protein with putative ankyrin and transmembrane regions. It is a member of one of the largest uncharacterized gene families in higher plants. The gene is involved in resistance to Pseudomonas syringae.	O.I.	C.G.	H.G.
14.7	99.4	55.8	At5g47070	834753	protein kinase, putative	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
14.5	99.4	313.9	At3g57260	824893	BGL2 (BETA-1,3-GLUCANASE 2)	beta 1,3-glucanase	O.I.	C.G.	H.G.
14.5	99.4	88.1	At1g35710	840475	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
14.5	99.4	40.6	At4g23150	828414	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
14.4	99.4	184.1	At5g24530	832524	DMR6 (DOWNY MILDEW RESISTANT 6)	Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.	O.I.	C.G.	H.G.
14.4	99.4	56.1	At1g66880	843006	serine/threonine protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
14.3	99.4	55.3	At5g54610	835550	ANK (ankyrin)	Induced in response to Salicylic acid. Belongs to the ankyrin repeat protein family.	O.I.	C.G.	H.G.
14.2	99.4	10.8	At2g29110	817459	ATGLR2.8	member of Putative ligand-gated ion channel subunit family	O.I.	C.G.	H.G.
14.1	99.4	116.9	At5g52760	835353	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P	O.I.	C.G.	H.G.
14.1	99.4	25.1	At1g67470	843068	protein kinase family protein	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVA	O.I.	C.G.	H.G.
14.0	99.4	72.2	At2g40270	818619	protein kinase family protein	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
14.0	99.4	19.6	At3g48080	823963	lipase class 3 family protein / disease resistance protein-related	F:lipase activity, triacylglycerol lipase activity, signal transducer activity;P:lipid metabolic process;C:cellular_component unknown;POB	O.I.	C.G.	H.G.
13.9	99.4	57.2	At5g52810	835358	ornithine cyclodeaminase/mu-crystallin family protein	F:structural constituent of eye lens, binding, catalytic activity;P:arginine catabolic process to glutamate, nopaline catabolic process, metabolic process, octopine catabolic process;C:chloroplast;BOMAFP	O.I.	C.G.	H.G.
13.8	99.4	47.2	At1g53230	841756	TCP3	Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.	O.I.	C.G.	H.G.
13.7	99.4	44.0	At3g28540	822484	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
13.7	99.4	18.3	At1g72280	843560	AERO1 (Arabidopsis endoplasmic reticulum oxidoreductins 1)	endoplasmic reticulum oxidoreductin	O.I.	C.G.	H.G.
13.6	99.4	18.6	At3g44350	823560	anac061 (Arabidopsis NAC domain containing protein 61)	F:transcription factor activity;P:multicellular organismal development, response to chitin, regulation of transcription;C:cellular_component unknown;P	O.I.	C.G.	H.G.
13.5	99.4	193.7	At4g14365	827080	zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MOBFPVA	O.I.	C.G.	H.G.
13.4	99.4	79.1	At5g52540	835330	unknown protein	F:unknown;P:unknown;C:chloroplast envelope;BOPA	O.I.	C.G.	H.G.
13.4	99.4	22.2	At2g14080	815893	disease resistance protein (TIR-NBS-LRR class), putative	F:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
13.3	99.4	36.3	At1g24140	839026	matrixin family protein	F:metallopeptidase activity, metalloendopeptidase activity;P:proteolysis, metabolic process;C:anchored to membrane;MOPBVAF	O.I.	C.G.	H.G.
13.3	99.4	14.4	At5g45000	834531	transmembrane receptor	F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:intrinsic to membrane;PBO	O.I.	C.G.	H.G.
13.2	99.4	38.7	At5g25250	832596	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPAV	O.I.	C.G.	H.G.
13.2	99.4	27.8	At3g11650	820337	NHL2	Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus and spermine. Overexpression of the gene induces the expression of PR-1 gene and shows light-dependent 'speck disease-like' symptom on leaves. The gene product is localized to the chloroplast	O.I.	C.G.	H.G.
13.1	99.4	24.5	At3g52710	824437	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
13.1	99.4	12.4	At2g36470	818221	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMO	O.I.	C.G.	H.G.
13.0	99.4	44.5	At1g67970	843125	AT-HSFA8	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
13.0	99.4	35.0	At3g07650	819956	COL9 (CONSTANS-LIKE 9)	This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.	O.I.	C.G.	H.G.
13.0	99.4	11.4	At4g38560	830013	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOBAFV	O.I.	C.G.	H.G.
12.9	99.3	218.9	At5g10760	830943	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast;PMFO	O.I.	C.G.	H.G.
12.7	99.3	26.7	At1g79110	844252	protein binding / zinc ion binding	F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOVF	O.I.	C.G.	H.G.
12.7	99.3	20.4	At3g26230	822224	CYP71B24	putative cytochrome P450	O.I.	C.G.	H.G.
12.6	99.3	60.2	At1g55910	842041	ZIP11 (ZINC TRANSPORTER 11 PRECURSOR)	member of Putative zinc transporter ZIP2 - like family	O.I.	C.G.	H.G.
12.6	99.3	22.0	At2g23200	816852	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
12.3	99.3	41.7	At1g68585	843188	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
12.2	99.3	124.9	At2g44210	819029	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PFB	O.I.	C.G.	H.G.

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GSM ID	GSM133048
Assay name	2790
GSE experiment	GSE5685: AtGenExpress: Pathogen Series: Pseudomonas half leaf injection

Microarray experiments to specifically-expressed genes

GSM ID GSM133048 Assay name 2790 GSE experiment GSE5685: AtGenExpress: Pathogen Series: Pseudomonas half leaf injection

GSM ID GSM133048

Assay name 2790

GSE experiment GSE5685: AtGenExpress: Pathogen Series: Pseudomonas half leaf injection