Microarray experiments to specifically-expressed genes

GSM ID GSM133044
Assay name 2786
GSE experiment GSE5685: AtGenExpress: Pathogen Series: Pseudomonas half leaf injection

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
48.499.8124.1At1g68600843190unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;BPFOO.I.C.G.H.G.
25.899.7113.1At1g30250839905unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
23.899.647.3At3g07650819956COL9 (CONSTANS-LIKE 9)This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.O.I.C.G.H.G.
21.599.6222.5At1g78020844137senescence-associated protein-relatedF:unknown;P:unknown;C:unknown;PO.I.C.G.H.G.
21.399.629.9At2g15830816079unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
21.099.6164.0At2g44210819029unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PFBO.I.C.G.H.G.
21.099.643.4At1g56150842068auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;POO.I.C.G.H.G.
20.399.6157.8At1g68520843181zinc finger (B-box type) family proteinF:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POMFO.I.C.G.H.G.
17.299.518.4At5g35480833512unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
16.699.586.8At1g30260839906-F:molecular_function unknown;P:response to cytokinin stimulus;C:unknown;PO.I.C.G.H.G.
16.299.551.1At1g53230841756TCP3Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation.O.I.C.G.H.G.
14.699.474.0At5g47640834815NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2)F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus, intracellular;MPFOO.I.C.G.H.G.
14.699.438.3At4g04540825785protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
13.899.439.7At4g02630828217protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
12.199.389.4At5g52780835355unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;BPOO.I.C.G.H.G.
12.199.383.7At1g65190842826protein kinase family proteinF:protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVO.I.C.G.H.G.
11.999.356.8At1g52000841629jacalin lectin family proteinF:molecular_function unknown;P:response to salt stress;C:cellular_component unknown;BOMPFVAO.I.C.G.H.G.
11.899.381.3At1g55000841942peptidoglycan-binding LysM domain-containing proteinF:molecular_function unknown;P:cell wall macromolecule catabolic process;C:endomembrane system;MPOBO.I.C.G.H.G.
11.399.332.9At3g48720824033transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFOO.I.C.G.H.G.
11.299.224.1At3g53950824562glyoxal oxidase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPOMO.I.C.G.H.G.
10.999.231.6At2g36430818217unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
10.199.2138.7At2g21970816733SEP2 (STRESS ENHANCED PROTEIN 2)stress enhanced protein 2 (SEP2) chlorophyll a/b-binding proteinO.I.C.G.H.G.
10.199.2115.5At5g23240832388DNAJ heat shock N-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:chloroplast;BOMPFAVO.I.C.G.H.G.
10.199.244.0At2g03550814884hydrolaseF:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAVO.I.C.G.H.G.
10.099.218.1At3g26230822224CYP71B24putative cytochrome P450O.I.C.G.H.G.
9.899.1197.0At1g66970843015SVL2 (SHV3-LIKE 2)F:kinase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to plasma membrane, apoplast, chloroplast, anchored to membrane;BPOMO.I.C.G.H.G.
9.899.176.4At1g07440837256tropinone reductase, putative / tropine dehydrogenase, putativeF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAVO.I.C.G.H.G.
9.899.158.5At3g20810821629transcription factor jumonji (jmjC) domain-containing proteinF:transcription factor activity;P:biological_process unknown;C:cellular_component unknown;MBOFPVO.I.C.G.H.G.
9.899.116.6At1g11350837677SD1-13 (S-DOMAIN-1 13)F:protein serine/threonine kinase activity, protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:plasma membrane;MPOBFVAO.I.C.G.H.G.
9.899.113.7At1g17610838337disease resistance protein-relatedF:transmembrane receptor activity, ATP binding;P:signal transduction, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PBOMFO.I.C.G.H.G.
9.799.185.0At3g11660820338NHL1encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive.O.I.C.G.H.G.
9.699.1125.0At3g28220822448meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:response to salt stress;C:vacuole, chloroplast envelope;PMOO.I.C.G.H.G.
9.599.119.7At3g28080822432nodulin MtN21 family proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PBOAMO.I.C.G.H.G.
9.499.134.5At2g01870814718unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;PO.I.C.G.H.G.
9.399.126.4At3g19850821522phototropic-responsive NPH3 family proteinF:protein binding, signal transducer activity;P:response to light stimulus;C:endomembrane system;PO.I.C.G.H.G.
9.399.120.4At5g52320835308CYP96A4member of CYP96AO.I.C.G.H.G.
9.399.118.3At4g00950827948MEE47 (maternal effect embryo arrest 47)F:transcription factor activity;P:embryonic development ending in seed dormancy, regulation of transcription;C:cellular_component unknown;PMFOO.I.C.G.H.G.
9.199.126.8At3g56060824772glucose-methanol-choline (GMC) oxidoreductase family proteinF:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVAO.I.C.G.H.G.
9.099.175.9At5g63180836439pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:unknown;BPFOO.I.C.G.H.G.
9.099.128.9At2g44740819082CYCP4F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:unknown;FOMPBO.I.C.G.H.G.



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