Microarray experiments to specifically-expressed genes

GSM ID GSM131835
Assay name Quick_A79_0-0hr_Rep4_ATH1
GSE experiment GSE5639: Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Controls)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
27.799.735.2At1g06100837119fatty acid desaturase family proteinF:oxidoreductase activity;P:lipid metabolic process;C:unknown;BOMFPVO.I.C.G.H.G.
25.299.6155.2At2g33850817954unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFPBAVO.I.C.G.H.G.
18.899.522.6At5g04660830343CYP77A4encodes a protein with cytochrome P450 domainO.I.C.G.H.G.
17.299.514.6At5g53210835402SPCH (SPEECHLESS)Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6.O.I.C.G.H.G.
17.199.545.9At4g16140827300proline-rich family proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPFOBVAO.I.C.G.H.G.
16.199.512.7At3g61840825357unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
14.299.433.7At4g02850828160phenazine biosynthesis PhzC/PhzF family proteinF:catalytic activity;P:biosynthetic process;C:endomembrane system;BOMFPAO.I.C.G.H.G.
14.099.417.9At3g01140821209MYB106 (myb domain protein 106)Encodes a putative transcription factor that is a member of the MYB family. Loss of function mutations show an increased number of branchpoints in leaf trichomes suggesting a role in negative regulation of trichome branching.O.I.C.G.H.G.
13.499.427.9At3g59670825136unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
13.199.433.2At1g23205838929invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
13.099.435.1At4g14770827132TCX2 (TESMIN/TSO1-LIKE CXC 2)F:transcription factor activity;P:regulation of transcription;C:chloroplast;OMPFBO.I.C.G.H.G.
12.899.375.6At1g25450839131KCS5 (3-KETOACYL-COA SYNTHASE 5)Encodes KCS5, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).O.I.C.G.H.G.
12.699.341.5At4g28780828999GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
12.599.312.8At1g49620841386ICK5Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Binds to D type cyclins and may inhibit cell cycle.O.I.C.G.H.G.
12.299.320.8At4g38950830050kinesin motor family proteinF:microtubule motor activity, ATP binding;P:microtubule-based process, microtubule-based movement;C:microtubule associated complex;MOPFO.I.C.G.H.G.
11.199.212.8At5g47380834785unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBOO.I.C.G.H.G.
11.099.214.7At3g52550824421-F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPVBO.I.C.G.H.G.
10.999.220.5At5g46690834712bHLH071 (beta HLH protein 71)F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFOMO.I.C.G.H.G.
10.899.246.8At5g65410836666HB25 (HOMEOBOX PROTEIN 25)Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.O.I.C.G.H.G.
10.799.210.2At5g60880836209unknown proteinF:unknown;P:unknown;C:cellular_component unknown;OPMFO.I.C.G.H.G.
10.399.2150.7At2g21140816649ATPRP2 (PROLINE-RICH PROTEIN 2)Proline-rich protein expressed in expanding leaves, stems, flowers, and siliques.O.I.C.G.H.G.
10.299.224.5At1g12020837754unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POO.I.C.G.H.G.
9.799.153.3At3g51870824350binding / transporterF:transporter activity, binding;P:transport, response to nematode;C:mitochondrial inner membrane, chloroplast, chloroplast envelope;MFPOVO.I.C.G.H.G.
9.699.176.8At5g62210836342embryo-specific protein-relatedF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPOFVBAO.I.C.G.H.G.
9.599.110.0At4g28160828931hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:response to gibberellin stimulus;C:endomembrane system;PO.I.C.G.H.G.
9.599.15.4At3g49950824157scarecrow transcription factor family proteinF:transcription factor activity;P:regulation of transcription;C:unknown;PBO.I.C.G.H.G.
9.499.197.8At1g06000837109UDP-glucoronosyl/UDP-glucosyl transferase family proteinencodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonolsO.I.C.G.H.G.
9.299.137.5At1g65450842857transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO.I.C.G.H.G.
9.199.18.0At3g27920822415ATMYB0 (MYB DOMAIN PROTEIN 0)Encodes a Myb-like protein that is required for induction of trichome development.O.I.C.G.H.G.
9.199.14.9At1g27940839687PGP13 (P-GLYCOPROTEIN 13)F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPVO.I.C.G.H.G.
9.099.140.5At4g39510830105CYP96A12member of CYP96AO.I.C.G.H.G.
8.899.080.7At3g54500824615-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBO.I.C.G.H.G.
8.899.072.2At5g12110831084elongation factor 1B alpha-subunit 1 (eEF1Balpha1)F:translation elongation factor activity;P:translational elongation;C:eukaryotic translation elongation factor 1 complex;MOPFO.I.C.G.H.G.
8.899.036.6At1g60590842353polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:unknown;FPBMOVAO.I.C.G.H.G.
8.799.09.6At2g35700818139ERF38 (ERF FAMILY PROTEIN 38)encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. Thought to be involved in secondary cell wall metabolism.O.I.C.G.H.G.
8.699.068.3At2g25060817044plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage