Microarray experiments to specifically-expressed genes

GSM ID GSM131768
Assay name Quick_A84_1-4hr-Rep4_ATH1
GSE experiment GSE5636: Systemic signalling of irradiance and CO2 concentration in Arabidopsis (Treatment 1: Ambient CO2 and Ambient Light)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
21.399.6142.5At2g33850817954unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMFPBAVO.I.C.G.H.G.
20.399.614.0At5g60880836209unknown proteinF:unknown;P:unknown;C:cellular_component unknown;OPMFO.I.C.G.H.G.
16.199.526.9At1g06100837119fatty acid desaturase family proteinF:oxidoreductase activity;P:lipid metabolic process;C:unknown;BOMFPVO.I.C.G.H.G.
14.799.465.9At3g51870824350binding / transporterF:transporter activity, binding;P:transport, response to nematode;C:mitochondrial inner membrane, chloroplast, chloroplast envelope;MFPOVO.I.C.G.H.G.
14.399.49.4At2g26520817193unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO.I.C.G.H.G.
13.399.450.2At2g34640818029PTAC12 (PLASTID TRANSCRIPTIONALLY ACTIVE12)Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.O.I.C.G.H.G.
13.299.457.0At5g08610830762DEAD box RNA helicase (RH26)F:helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity;P:unknown;C:chloroplast;BOMFPAVO.I.C.G.H.G.
13.299.450.3At1g69200843251kinaseF:kinase activity;P:acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:nucleoid;BOPAMFO.I.C.G.H.G.
12.799.328.7At1g49650841389cell death associated protein-relatedF:hydrolase activity;P:metabolic process;C:unknown;BOPFMAVO.I.C.G.H.G.
11.899.340.6At3g48500824009RNA bindingF:RNA binding;P:unknown;C:plastid chromosome, chloroplast, nucleoid;POVMFBO.I.C.G.H.G.
11.799.379.4At2g25060817044plastocyanin-like domain-containing proteinF:electron carrier activity, copper ion binding;P:unknown;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PO.I.C.G.H.G.
11.699.367.7At3g06730819858thioredoxin family proteinF:unknown;P:cell redox homeostasis;C:thylakoid, chloroplast, nucleoid;BOMPFAO.I.C.G.H.G.
11.699.338.2At5g23070832371thymidine kinase, putativeF:thymidine kinase activity, ATP binding;P:pyrimidine deoxyribonucleoside interconversion, anaerobic respiration;C:unknown;BOVMPAFO.I.C.G.H.G.
11.499.371.6At1g10522837593unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
11.299.239.1At4g28780828999GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMO.I.C.G.H.G.
11.199.219.1At3g55660824732ROPGEF6Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.O.I.C.G.H.G.
11.199.215.7At3g20440821589alpha-amylase/ catalytic/ cation bindingF:cation binding, catalytic activity, alpha-amylase activity;P:embryonic development ending in seed dormancy, carbohydrate metabolic process;C:chloroplast;BPOMFAO.I.C.G.H.G.
10.999.240.5At1g31690840056amine oxidase/ copper ion binding / quinone bindingF:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPAO.I.C.G.H.G.
10.799.29.5At2g37390818315heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;PBMFO.I.C.G.H.G.
10.499.235.2At1g48460841267unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast envelope;PO.I.C.G.H.G.
10.399.29.7At4g17240827436unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBFO.I.C.G.H.G.
10.299.2233.9At1g5766084214260S ribosomal protein L21 (RPL21E)F:structural constituent of ribosome;P:translation;C:ribosome, intracellular;MOAFPO.I.C.G.H.G.
10.199.216.4At4g11080826709high mobility group (HMG1/2) family proteinF:transcription factor activity;P:unknown;C:nucleus, chloroplast;MOBFPAVO.I.C.G.H.G.
10.099.213.2At1g31680--O.I.C.G.H.G.
9.999.122.8At2g24120816946SCA3 (SCABRA 3)F:DNA-directed RNA polymerase activity, DNA binding;P:transcription;C:mitochondrion;OFPMVBO.I.C.G.H.G.
9.899.137.0At5g57180835824CIA2 (CHLOROPLAST IMPORT APPARATUS 2)Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast.O.I.C.G.H.G.
9.799.118.4At3g03630821203CS26O-acetylserine (thiol) lyaseO.I.C.G.H.G.
9.799.110.7At4g16970827405ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOPFBVAO.I.C.G.H.G.
9.699.154.4At1g59990842293DEAD/DEAH box helicase, putative (RH22)F:helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding;P:biological_process unknown;C:chloroplast;BMOFPAVO.I.C.G.H.G.
9.699.139.1At3g61100825282unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
9.699.111.7At1g10930837636RECQ4ADNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.O.I.C.G.H.G.
9.599.168.4At5g10400830904histone H3F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPOO.I.C.G.H.G.
9.599.19.3At5g26790832737unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
9.299.115.8At4g03100828092rac GTPase activating protein, putativeF:Rac GTPase activator activity;P:signal transduction;C:intracellular;MOFPO.I.C.G.H.G.
9.299.113.3At1g52770841710phototropic-responsive NPH3 family proteinF:signal transducer activity;P:response to light stimulus;C:cellular_component unknown;PO.I.C.G.H.G.
9.199.138.6At2g28210817367ATACA2 (ALPHA CARBONIC ANHYDRASE 2)F:carbonate dehydratase activity, zinc ion binding;P:response to carbon dioxide, one-carbon compound metabolic process;C:cellular_component unknown;MBPOFVO.I.C.G.H.G.
9.099.176.4At2g3760081833760S ribosomal protein L36 (RPL36A)F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MOPFO.I.C.G.H.G.
9.099.19.5At3g61840825357unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
8.999.034.0At1g09900837522pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;POMFBAO.I.C.G.H.G.
8.999.033.1At4g34250829574KCS16 (3-KETOACYL-COA SYNTHASE 16)Encodes KCS16, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).O.I.C.G.H.G.
8.999.020.6At3g56330824800N2,N2-dimethylguanosine tRNA methyltransferase family proteinF:RNA binding, tRNA (guanine-N2-)-methyltransferase activity;P:tRNA processing;C:unknown;OMAFPBO.I.C.G.H.G.
8.999.011.5At5g47380834785unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBOO.I.C.G.H.G.
8.899.022.5At3g49240824085emb1796 (embryo defective 1796)F:ATP binding;P:embryonic development ending in seed dormancy;C:mitochondrion, chloroplast;POMFBAO.I.C.G.H.G.
8.799.029.4At1g63810842684-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPAO.I.C.G.H.G.
8.799.09.6At4g21270827876ATK1 (ARABIDOPSIS THALIANA KINESIN 1)Encodes a kinesin-like motor protein heavy chain. Loss of function mutations have reduced fertility and are defective in spindle formation in male meiosis.O.I.C.G.H.G.
8.799.08.8At1g51080841530unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOPFO.I.C.G.H.G.
8.699.039.8At3g02450821139cell division protein ftsH, putativeF:in 6 functions;P:unknown;C:integral to membrane, chloroplast;BOMFPAVO.I.C.G.H.G.



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