CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM131643

Assay name ATGE_2_A

GSE experiment GSE5633: AtGenExpress: Developmental series (shoots and stems)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
639.5 100.0 108.3 At4g21760 828264 BGLU47 (Beta-glucosidase 47) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA O.I. C.G. H.G.
357.7 100.0 113.8 At1g69230 843254 SP1L2 (SPIRAL1-LIKE2) SPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion. O.I. C.G. H.G.
155.5 99.9 39.5 At3g02500 821065 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
148.7 99.9 85.8 At1g35290 840418 thioesterase family protein F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:unknown;BOPA O.I. C.G. H.G.
144.8 99.9 93.4 At3g44970 823632 cytochrome P450 family protein F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:endomembrane system;MPBFOAV O.I. C.G. H.G.
124.3 99.9 47.2 At1g16530 838223 ASL9 (ASYMMETRIC LEAVES 2 LIKE 9) F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
99.5 99.9 34.3 At3g62930 825468 glutaredoxin family protein F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:cellular_component unknown;PMFOB O.I. C.G. H.G.
92.0 99.9 123.6 At1g31710 840058 copper amine oxidase, putative F:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA O.I. C.G. H.G.
76.3 99.9 33.5 At3g30340 822735 nodulin MtN21 family protein F:unknown;P:unknown;C:endomembrane system, membrane;OBPAM O.I. C.G. H.G.
69.0 99.9 68.0 At5g10170 830881 MIPS3 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 3) myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization. O.I. C.G. H.G.
66.7 99.8 107.8 At3g02885 821194 GASA5 (GAST1 PROTEIN HOMOLOG 5) F:unknown;P:response to gibberellin stimulus;C:endomembrane system;P O.I. C.G. H.G.
65.8 99.8 30.3 At3g46880 823841 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
63.6 99.8 71.3 At4g02850 828160 phenazine biosynthesis PhzC/PhzF family protein F:catalytic activity;P:biosynthetic process;C:endomembrane system;BOMFPA O.I. C.G. H.G.
59.9 99.8 193.5 At4g28250 828940 ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3) putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
59.7 99.8 249.5 At4g02290 828080 AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13) F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF O.I. C.G. H.G.
55.1 99.8 78.7 At3g03910 821072 GDH3 (GLUTAMATE DEHYDROGENASE 3) GDH3 encodes a member of the glutamate dehydrogenease family. Its expression is upregulated in response to cytokinin and it may play a role in the control of nitrogen metabolism in leaf development. O.I. C.G. H.G.
53.4 99.8 109.6 At1g62560 842553 FMO GS-OX3 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 3) belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates O.I. C.G. H.G.
50.3 99.8 26.1 At1g07880 837303 ATMPK13 member of MAP Kinase O.I. C.G. H.G.
44.8 99.8 86.2 At2g39510 818536 nodulin MtN21 family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;BOPAM O.I. C.G. H.G.
41.2 99.8 18.4 At5g01840 831813 OFP1 (OVATE FAMILY PROTEIN 1) Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation. O.I. C.G. H.G.
40.5 99.8 20.7 At4g20230 827770 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PFO O.I. C.G. H.G.
39.4 99.8 74.0 At2g36570 818230 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
37.6 99.7 130.1 At4g11190 826721 disease resistance-responsive family protein / dirigent family protein F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P O.I. C.G. H.G.
34.8 99.7 37.4 At2g31160 817672 LSH3 (LIGHT SENSITIVE HYPOCOTYLS 3) F:molecular_function unknown;P:biological_process unknown;C:unknown;PM O.I. C.G. H.G.
34.6 99.7 142.5 At1g19600 838547 pfkB-type carbohydrate kinase family protein F:kinase activity;P:D-ribose catabolic process;C:cellular_component unknown;BOMPAF O.I. C.G. H.G.
33.9 99.7 63.4 At3g03190 821227 ATGSTF11 (GLUTATHIONE S-TRANSFERASE F11) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
33.8 99.7 86.8 At1g56430 842096 NAS4 (NICOTIANAMINE SYNTHASE 4) F:nicotianamine synthase activity;P:nicotianamine biosynthetic process;C:cellular_component unknown;PFABO O.I. C.G. H.G.
33.5 99.7 37.5 At2g40480 818643 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPBFV O.I. C.G. H.G.
33.2 99.7 14.4 At1g30515 839931 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
32.4 99.7 158.8 At3g54260 824593 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PM O.I. C.G. H.G.
31.9 99.7 19.4 At5g23400 832405 disease resistance family protein / LRR family protein F:protein binding;P:signal transduction, defense response;C:cell wall;PMOBFAV O.I. C.G. H.G.
30.9 99.7 59.5 At4g01390 828075 - F:molecular_function unknown;P:biological_process unknown;C:unknown;PO O.I. C.G. H.G.
29.8 99.7 28.0 At3g52900 824456 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBAF O.I. C.G. H.G.
29.5 99.7 127.4 At2g22330 816765 CYP79B3 Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. O.I. C.G. H.G.
29.2 99.7 68.7 At3g51720 824335 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBPFAV O.I. C.G. H.G.
29.0 99.7 21.6 At1g10460 837586 GLP7 (GERMIN-LIKE PROTEIN 7) germin-like protein (GLP7) O.I. C.G. H.G.
28.9 99.7 33.5 At2g41370 818735 BOP2 (BLADE ON PETIOLE2) Encodes a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abs cission. O.I. C.G. H.G.
28.4 99.7 25.0 At5g48800 834938 phototropic-responsive NPH3 family protein F:protein binding, signal transducer activity;P:response to light stimulus;C:plasma membrane;P O.I. C.G. H.G.
26.7 99.7 31.8 At5g51350 835209 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFAV O.I. C.G. H.G.
26.3 99.7 44.0 At1g01190 839233 CYP78A8 member of CYP78A O.I. C.G. H.G.
26.1 99.7 37.7 At5g65970 836727 MLO10 (MILDEW RESISTANCE LOCUS O 10) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s O.I. C.G. H.G.
25.9 99.7 82.2 At3g24770 822075 CLE41 (CLAVATA3/ESR-RELATED 41) Belongs to a large gene family, called CLE for CLAVATA3/ESR-related, encoding small peptides with conserved carboxyl termini. The C-terminal 12 amino acid sequence of CLE41 is identical to that of a dodeca peptide (TDIF, tracheary element differentiation inhibitory factor) isolated from Arabidopsis and functions as a suppressor of plant stem cell differentiation. TDIF sequence is also identical to the C-terminal 12 amino acids of CLE44 (At4g13195). O.I. C.G. H.G.
25.5 99.7 34.3 At3g25560 822143 NIK2 (NSP-INTERACTING KINASE 2) F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
24.9 99.6 20.3 At1g33440 840237 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;BPMOF O.I. C.G. H.G.
24.5 99.6 20.2 At5g61290 836250 flavin-containing monooxygenase family protein / FMO family protein F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:unknown;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
24.1 99.6 96.5 At1g78490 844185 CYP708A3 member of CYP708A O.I. C.G. H.G.
24.1 99.6 41.9 At3g02120 821311 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:response to cyclopentenone;C:cellular_component unknown;P O.I. C.G. H.G.
23.9 99.6 173.9 At5g04950 830377 NAS1 (NICOTIANAMINE SYNTHASE 1) Encodes a nicotianamide synthase. O.I. C.G. H.G.
23.9 99.6 66.2 At2g34490 818012 CYP710A2 (cytochrome P450, family 710, subfamily A, polypeptide 2) Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze the conversion of both 24-epi-campesterol and β-sitosterol to brassicasterol and stigmasterol, respectively, in the presence of NADPH. O.I. C.G. H.G.
23.5 99.6 139.6 At3g45160 823652 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
23.4 99.6 51.6 At5g19600 832080 SULTR3 Encodes sulfate transporter Sultr3;5. O.I. C.G. H.G.
22.1 99.6 6.5 At1g65890 842901 AAE12 (ACYL ACTIVATING ENZYME 12) F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
21.9 99.6 26.7 At5g26670 832722 pectinacetylesterase, putative F:carboxylesterase activity;P:unknown;C:endomembrane system;PMOB O.I. C.G. H.G.
21.5 99.6 50.3 At2g24762 817013 AtGDU4 (Arabidopsis thaliana GLUTAMINE DUMPER 4) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
21.5 99.6 24.6 At2g28250 817371 NCRK F:kinase activity;P:xylem histogenesis;C:endosome, endomembrane system;MPOBFVA O.I. C.G. H.G.
21.2 99.6 361.1 At3g16530 820901 legume lectin family protein Lectin like protein whose expression is induced upon treatment with chitin oligomers. O.I. C.G. H.G.
20.2 99.6 24.0 At1g78120 844148 tetratricopeptide repeat (TPR)-containing protein F:binding;P:unknown;C:mitochondrion;MOBFPA O.I. C.G. H.G.
20.0 99.6 67.1 At2g33050 817867 AtRLP26 (Receptor Like Protein 26) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
19.9 99.6 24.8 At1g80690 844408 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF O.I. C.G. H.G.
19.7 99.6 81.1 At4g08150 826364 KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA) A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate. O.I. C.G. H.G.
19.7 99.6 33.5 At2g36120 3768574 DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1) Encodes a glycine rich protein that is involved in leaf vascular patterning. dot1 mutants have an aberrant open-class venation pattern in leaves and cotyledons, as well as several other leaf development defects. O.I. C.G. H.G.
19.6 99.6 61.4 At5g60890 836210 MYB34 (MYB DOMAIN PROTEIN 34) Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis. O.I. C.G. H.G.
19.4 99.6 27.5 At2g24190 816953 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
19.3 99.6 69.9 At5g44400 834466 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:cell wall;BFOPAM O.I. C.G. H.G.
19.3 99.6 54.8 At5g05250 830407 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
19.2 99.6 29.3 At4g20430 827791 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system, cell wall, membrane;BPOFAM O.I. C.G. H.G.
18.9 99.5 48.6 At4g29720 829093 ATPAO5 (Polyamine oxidase 5) F:electron carrier activity, amine oxidase activity, oxidoreductase activity;P:unknown;C:endomembrane system;MBFOP O.I. C.G. H.G.
18.8 99.5 14.0 At5g04330 830312 cytochrome P450, putative / ferulate-5-hydroxylase, putative F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:endomembrane system;MPFBOAV O.I. C.G. H.G.
18.7 99.5 25.3 At1g60270 3767579 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
18.6 99.5 53.9 At1g59740 842267 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport, response to nematode;C:plasma membrane, membrane;BPMOF O.I. C.G. H.G.
18.5 99.5 18.8 At2g21830 816719 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PMO O.I. C.G. H.G.
18.4 99.5 25.4 At1g28390 839736 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
18.3 99.5 24.1 At4g22160 828305 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
18.3 99.5 18.4 At4g34560 829608 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
18.1 99.5 204.4 At3g44990 823634 XTR8 (XYLOGLUCAN ENDO-TRANSGLYCOSYLASE-RELATED 8) xyloglucan endo-transglycosylase O.I. C.G. H.G.
18.1 99.5 20.2 At1g16070 838177 AtTLP8 (TUBBY LIKE PROTEIN 8) Member of TLP family O.I. C.G. H.G.
17.8 99.5 35.8 At5g05160 830398 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cell wall, plasma membrane;PMOBFVA O.I. C.G. H.G.
17.8 99.5 13.8 At5g03270 831890 unknown protein F:molecular_function unknown;P:lysine biosynthetic process via diaminopimelate;C:unknown;BOPFMA O.I. C.G. H.G.
17.4 99.5 12.6 At1g03020 839505 glutaredoxin family protein F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:cellular_component unknown;PMFOB O.I. C.G. H.G.
17.0 99.5 123.1 At4g29080 829029 PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2) phytochrome-associated protein 2 (PAP2) O.I. C.G. H.G.
17.0 99.5 84.3 At1g78060 844141 glycosyl hydrolase family 3 protein F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:apoplast, cell wall, chloroplast, plant-type cell wall;BOFPAM O.I. C.G. H.G.
16.8 99.5 30.4 At3g19370 821471 - F:unknown;P:unknown;C:plasma membrane;MOBFPAV O.I. C.G. H.G.
16.7 99.5 29.6 At5g07690 830662 ATMYB29 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 29) Encodes a putative transcription factor (MYB29). O.I. C.G. H.G.
16.7 99.5 26.0 At1g35260 840415 MLP165 (MLP-LIKE PROTEIN 165) F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
16.5 99.5 12.8 At3g25130 822104 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMFBPVA O.I. C.G. H.G.
16.4 99.5 18.6 At1g62540 842551 FMO GS-OX2 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 2) belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates O.I. C.G. H.G.
16.3 99.5 158.9 At4g39950 830154 CYP79B2 Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. O.I. C.G. H.G.
16.3 99.5 70.4 At5g61420 836263 MYB28 (myb domain protein 28) Encodes a nuclear localized member of the MYB transcription factor family. Involved in positive regulation of aliphatic glucosinolate biosynthesis.Expression is induced by touch, wounding and glucose. O.I. C.G. H.G.
16.2 99.5 77.5 At1g14210 837982 ribonuclease T2 family protein F:ribonuclease T2 activity, endoribonuclease activity, RNA binding;P:response to salt stress;C:endomembrane system;PFMBOV O.I. C.G. H.G.
15.8 99.5 55.6 At4g34160 829564 CYCD3 encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1. O.I. C.G. H.G.
15.7 99.5 8.9 At4g28430 828960 reticulon family protein F:unknown;P:biological_process unknown;C:endoplasmic reticulum, chloroplast;MPOF O.I. C.G. H.G.
15.4 99.5 22.7 At3g07340 819922 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus, chloroplast;POMFB O.I. C.G. H.G.
15.1 99.4 40.1 At1g05710 837078 ethylene-responsive protein, putative F:transcription factor activity;P:response to ethylene stimulus, regulation of transcription;C:nucleus;P O.I. C.G. H.G.
15.0 99.4 51.9 At1g62800 842579 ASP4 (ASPARTATE AMINOTRANSFERASE 4) Encodes aspartate aminotransferase (Asp4). O.I. C.G. H.G.
15.0 99.4 29.2 At5g58300 835942 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
15.0 99.4 20.7 At4g00230 827949 XSP1 (xylem serine peptidase 1) F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:cell wall, plant-type cell wall;BPOFMA O.I. C.G. H.G.
15.0 99.4 16.8 At3g47570 823911 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
14.9 99.4 22.9 At3g54990 824664 SMZ (SCHLAFMUTZE) Encodes a AP2 domain transcription factor that can repress flowering. SMZ and its paralogous gene, SNARCHZAPFEN (SNZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering. O.I. C.G. H.G.
14.8 99.4 47.5 At1g47670 841177 amino acid transporter family protein F:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;PMFOB O.I. C.G. H.G.
14.8 99.4 35.2 At1g65860 842897 FMO GS-OX1 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 1) belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
639.5	100.0	108.3	At4g21760	828264	BGLU47 (Beta-glucosidase 47)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA	O.I.	C.G.	H.G.
357.7	100.0	113.8	At1g69230	843254	SP1L2 (SPIRAL1-LIKE2)	SPIRAL1-LIKE2 belongs to a six-member gene family in Arabidopsis; all members share a high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root and organ growth as a result of defective anisotropic cell expansion.	O.I.	C.G.	H.G.
155.5	99.9	39.5	At3g02500	821065	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
148.7	99.9	85.8	At1g35290	840418	thioesterase family protein	F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:unknown;BOPA	O.I.	C.G.	H.G.
144.8	99.9	93.4	At3g44970	823632	cytochrome P450 family protein	F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:endomembrane system;MPBFOAV	O.I.	C.G.	H.G.
124.3	99.9	47.2	At1g16530	838223	ASL9 (ASYMMETRIC LEAVES 2 LIKE 9)	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
99.5	99.9	34.3	At3g62930	825468	glutaredoxin family protein	F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:cellular_component unknown;PMFOB	O.I.	C.G.	H.G.
92.0	99.9	123.6	At1g31710	840058	copper amine oxidase, putative	F:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA	O.I.	C.G.	H.G.
76.3	99.9	33.5	At3g30340	822735	nodulin MtN21 family protein	F:unknown;P:unknown;C:endomembrane system, membrane;OBPAM	O.I.	C.G.	H.G.
69.0	99.9	68.0	At5g10170	830881	MIPS3 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 3)	myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.	O.I.	C.G.	H.G.
66.7	99.8	107.8	At3g02885	821194	GASA5 (GAST1 PROTEIN HOMOLOG 5)	F:unknown;P:response to gibberellin stimulus;C:endomembrane system;P	O.I.	C.G.	H.G.
65.8	99.8	30.3	At3g46880	823841	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
63.6	99.8	71.3	At4g02850	828160	phenazine biosynthesis PhzC/PhzF family protein	F:catalytic activity;P:biosynthetic process;C:endomembrane system;BOMFPA	O.I.	C.G.	H.G.
59.9	99.8	193.5	At4g28250	828940	ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3)	putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
59.7	99.8	249.5	At4g02290	828080	AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13)	F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF	O.I.	C.G.	H.G.
55.1	99.8	78.7	At3g03910	821072	GDH3 (GLUTAMATE DEHYDROGENASE 3)	GDH3 encodes a member of the glutamate dehydrogenease family. Its expression is upregulated in response to cytokinin and it may play a role in the control of nitrogen metabolism in leaf development.	O.I.	C.G.	H.G.
53.4	99.8	109.6	At1g62560	842553	FMO GS-OX3 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 3)	belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates	O.I.	C.G.	H.G.
50.3	99.8	26.1	At1g07880	837303	ATMPK13	member of MAP Kinase	O.I.	C.G.	H.G.
44.8	99.8	86.2	At2g39510	818536	nodulin MtN21 family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;BOPAM	O.I.	C.G.	H.G.
41.2	99.8	18.4	At5g01840	831813	OFP1 (OVATE FAMILY PROTEIN 1)	Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.	O.I.	C.G.	H.G.
40.5	99.8	20.7	At4g20230	827770	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PFO	O.I.	C.G.	H.G.
39.4	99.8	74.0	At2g36570	818230	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
37.6	99.7	130.1	At4g11190	826721	disease resistance-responsive family protein / dirigent family protein	F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
34.8	99.7	37.4	At2g31160	817672	LSH3 (LIGHT SENSITIVE HYPOCOTYLS 3)	F:molecular_function unknown;P:biological_process unknown;C:unknown;PM	O.I.	C.G.	H.G.
34.6	99.7	142.5	At1g19600	838547	pfkB-type carbohydrate kinase family protein	F:kinase activity;P:D-ribose catabolic process;C:cellular_component unknown;BOMPAF	O.I.	C.G.	H.G.
33.9	99.7	63.4	At3g03190	821227	ATGSTF11 (GLUTATHIONE S-TRANSFERASE F11)	Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
33.8	99.7	86.8	At1g56430	842096	NAS4 (NICOTIANAMINE SYNTHASE 4)	F:nicotianamine synthase activity;P:nicotianamine biosynthetic process;C:cellular_component unknown;PFABO	O.I.	C.G.	H.G.
33.5	99.7	37.5	At2g40480	818643	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPBFV	O.I.	C.G.	H.G.
33.2	99.7	14.4	At1g30515	839931	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
32.4	99.7	158.8	At3g54260	824593	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PM	O.I.	C.G.	H.G.
31.9	99.7	19.4	At5g23400	832405	disease resistance family protein / LRR family protein	F:protein binding;P:signal transduction, defense response;C:cell wall;PMOBFAV	O.I.	C.G.	H.G.
30.9	99.7	59.5	At4g01390	828075	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;PO	O.I.	C.G.	H.G.
29.8	99.7	28.0	At3g52900	824456	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBAF	O.I.	C.G.	H.G.
29.5	99.7	127.4	At2g22330	816765	CYP79B3	Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.	O.I.	C.G.	H.G.
29.2	99.7	68.7	At3g51720	824335	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBPFAV	O.I.	C.G.	H.G.
29.0	99.7	21.6	At1g10460	837586	GLP7 (GERMIN-LIKE PROTEIN 7)	germin-like protein (GLP7)	O.I.	C.G.	H.G.
28.9	99.7	33.5	At2g41370	818735	BOP2 (BLADE ON PETIOLE2)	Encodes a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abs cission.	O.I.	C.G.	H.G.
28.4	99.7	25.0	At5g48800	834938	phototropic-responsive NPH3 family protein	F:protein binding, signal transducer activity;P:response to light stimulus;C:plasma membrane;P	O.I.	C.G.	H.G.
26.7	99.7	31.8	At5g51350	835209	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFAV	O.I.	C.G.	H.G.
26.3	99.7	44.0	At1g01190	839233	CYP78A8	member of CYP78A	O.I.	C.G.	H.G.
26.1	99.7	37.7	At5g65970	836727	MLO10 (MILDEW RESISTANCE LOCUS O 10)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s	O.I.	C.G.	H.G.
25.9	99.7	82.2	At3g24770	822075	CLE41 (CLAVATA3/ESR-RELATED 41)	Belongs to a large gene family, called CLE for CLAVATA3/ESR-related, encoding small peptides with conserved carboxyl termini. The C-terminal 12 amino acid sequence of CLE41 is identical to that of a dodeca peptide (TDIF, tracheary element differentiation inhibitory factor) isolated from Arabidopsis and functions as a suppressor of plant stem cell differentiation. TDIF sequence is also identical to the C-terminal 12 amino acids of CLE44 (At4g13195).	O.I.	C.G.	H.G.
25.5	99.7	34.3	At3g25560	822143	NIK2 (NSP-INTERACTING KINASE 2)	F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
24.9	99.6	20.3	At1g33440	840237	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;BPMOF	O.I.	C.G.	H.G.
24.5	99.6	20.2	At5g61290	836250	flavin-containing monooxygenase family protein / FMO family protein	F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:unknown;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
24.1	99.6	96.5	At1g78490	844185	CYP708A3	member of CYP708A	O.I.	C.G.	H.G.
24.1	99.6	41.9	At3g02120	821311	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:response to cyclopentenone;C:cellular_component unknown;P	O.I.	C.G.	H.G.
23.9	99.6	173.9	At5g04950	830377	NAS1 (NICOTIANAMINE SYNTHASE 1)	Encodes a nicotianamide synthase.	O.I.	C.G.	H.G.
23.9	99.6	66.2	At2g34490	818012	CYP710A2 (cytochrome P450, family 710, subfamily A, polypeptide 2)	Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze the conversion of both 24-epi-campesterol and β-sitosterol to brassicasterol and stigmasterol, respectively, in the presence of NADPH.	O.I.	C.G.	H.G.
23.5	99.6	139.6	At3g45160	823652	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
23.4	99.6	51.6	At5g19600	832080	SULTR3	Encodes sulfate transporter Sultr3;5.	O.I.	C.G.	H.G.
22.1	99.6	6.5	At1g65890	842901	AAE12 (ACYL ACTIVATING ENZYME 12)	F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
21.9	99.6	26.7	At5g26670	832722	pectinacetylesterase, putative	F:carboxylesterase activity;P:unknown;C:endomembrane system;PMOB	O.I.	C.G.	H.G.
21.5	99.6	50.3	At2g24762	817013	AtGDU4 (Arabidopsis thaliana GLUTAMINE DUMPER 4)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
21.5	99.6	24.6	At2g28250	817371	NCRK	F:kinase activity;P:xylem histogenesis;C:endosome, endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
21.2	99.6	361.1	At3g16530	820901	legume lectin family protein	Lectin like protein whose expression is induced upon treatment with chitin oligomers.	O.I.	C.G.	H.G.
20.2	99.6	24.0	At1g78120	844148	tetratricopeptide repeat (TPR)-containing protein	F:binding;P:unknown;C:mitochondrion;MOBFPA	O.I.	C.G.	H.G.
20.0	99.6	67.1	At2g33050	817867	AtRLP26 (Receptor Like Protein 26)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
19.9	99.6	24.8	At1g80690	844408	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF	O.I.	C.G.	H.G.
19.7	99.6	81.1	At4g08150	826364	KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA)	A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate.	O.I.	C.G.	H.G.
19.7	99.6	33.5	At2g36120	3768574	DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1)	Encodes a glycine rich protein that is involved in leaf vascular patterning. dot1 mutants have an aberrant open-class venation pattern in leaves and cotyledons, as well as several other leaf development defects.	O.I.	C.G.	H.G.
19.6	99.6	61.4	At5g60890	836210	MYB34 (MYB DOMAIN PROTEIN 34)	Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis.	O.I.	C.G.	H.G.
19.4	99.6	27.5	At2g24190	816953	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
19.3	99.6	69.9	At5g44400	834466	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:cell wall;BFOPAM	O.I.	C.G.	H.G.
19.3	99.6	54.8	At5g05250	830407	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
19.2	99.6	29.3	At4g20430	827791	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system, cell wall, membrane;BPOFAM	O.I.	C.G.	H.G.
18.9	99.5	48.6	At4g29720	829093	ATPAO5 (Polyamine oxidase 5)	F:electron carrier activity, amine oxidase activity, oxidoreductase activity;P:unknown;C:endomembrane system;MBFOP	O.I.	C.G.	H.G.
18.8	99.5	14.0	At5g04330	830312	cytochrome P450, putative / ferulate-5-hydroxylase, putative	F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:endomembrane system;MPFBOAV	O.I.	C.G.	H.G.
18.7	99.5	25.3	At1g60270	3767579	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
18.6	99.5	53.9	At1g59740	842267	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport, response to nematode;C:plasma membrane, membrane;BPMOF	O.I.	C.G.	H.G.
18.5	99.5	18.8	At2g21830	816719	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PMO	O.I.	C.G.	H.G.
18.4	99.5	25.4	At1g28390	839736	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
18.3	99.5	24.1	At4g22160	828305	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
18.3	99.5	18.4	At4g34560	829608	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
18.1	99.5	204.4	At3g44990	823634	XTR8 (XYLOGLUCAN ENDO-TRANSGLYCOSYLASE-RELATED 8)	xyloglucan endo-transglycosylase	O.I.	C.G.	H.G.
18.1	99.5	20.2	At1g16070	838177	AtTLP8 (TUBBY LIKE PROTEIN 8)	Member of TLP family	O.I.	C.G.	H.G.
17.8	99.5	35.8	At5g05160	830398	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cell wall, plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
17.8	99.5	13.8	At5g03270	831890	unknown protein	F:molecular_function unknown;P:lysine biosynthetic process via diaminopimelate;C:unknown;BOPFMA	O.I.	C.G.	H.G.
17.4	99.5	12.6	At1g03020	839505	glutaredoxin family protein	F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:cellular_component unknown;PMFOB	O.I.	C.G.	H.G.
17.0	99.5	123.1	At4g29080	829029	PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2)	phytochrome-associated protein 2 (PAP2)	O.I.	C.G.	H.G.
17.0	99.5	84.3	At1g78060	844141	glycosyl hydrolase family 3 protein	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:apoplast, cell wall, chloroplast, plant-type cell wall;BOFPAM	O.I.	C.G.	H.G.
16.8	99.5	30.4	At3g19370	821471	-	F:unknown;P:unknown;C:plasma membrane;MOBFPAV	O.I.	C.G.	H.G.
16.7	99.5	29.6	At5g07690	830662	ATMYB29 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 29)	Encodes a putative transcription factor (MYB29).	O.I.	C.G.	H.G.
16.7	99.5	26.0	At1g35260	840415	MLP165 (MLP-LIKE PROTEIN 165)	F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
16.5	99.5	12.8	At3g25130	822104	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMFBPVA	O.I.	C.G.	H.G.
16.4	99.5	18.6	At1g62540	842551	FMO GS-OX2 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 2)	belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates	O.I.	C.G.	H.G.
16.3	99.5	158.9	At4g39950	830154	CYP79B2	Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.	O.I.	C.G.	H.G.
16.3	99.5	70.4	At5g61420	836263	MYB28 (myb domain protein 28)	Encodes a nuclear localized member of the MYB transcription factor family. Involved in positive regulation of aliphatic glucosinolate biosynthesis.Expression is induced by touch, wounding and glucose.	O.I.	C.G.	H.G.
16.2	99.5	77.5	At1g14210	837982	ribonuclease T2 family protein	F:ribonuclease T2 activity, endoribonuclease activity, RNA binding;P:response to salt stress;C:endomembrane system;PFMBOV	O.I.	C.G.	H.G.
15.8	99.5	55.6	At4g34160	829564	CYCD3	encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.	O.I.	C.G.	H.G.
15.7	99.5	8.9	At4g28430	828960	reticulon family protein	F:unknown;P:biological_process unknown;C:endoplasmic reticulum, chloroplast;MPOF	O.I.	C.G.	H.G.
15.4	99.5	22.7	At3g07340	819922	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus, chloroplast;POMFB	O.I.	C.G.	H.G.
15.1	99.4	40.1	At1g05710	837078	ethylene-responsive protein, putative	F:transcription factor activity;P:response to ethylene stimulus, regulation of transcription;C:nucleus;P	O.I.	C.G.	H.G.
15.0	99.4	51.9	At1g62800	842579	ASP4 (ASPARTATE AMINOTRANSFERASE 4)	Encodes aspartate aminotransferase (Asp4).	O.I.	C.G.	H.G.
15.0	99.4	29.2	At5g58300	835942	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
15.0	99.4	20.7	At4g00230	827949	XSP1 (xylem serine peptidase 1)	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:cell wall, plant-type cell wall;BPOFMA	O.I.	C.G.	H.G.
15.0	99.4	16.8	At3g47570	823911	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
14.9	99.4	22.9	At3g54990	824664	SMZ (SCHLAFMUTZE)	Encodes a AP2 domain transcription factor that can repress flowering. SMZ and its paralogous gene, SNARCHZAPFEN (SNZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering.	O.I.	C.G.	H.G.
14.8	99.4	47.5	At1g47670	841177	amino acid transporter family protein	F:amino acid transmembrane transporter activity;P:amino acid transport;C:plasma membrane, membrane;PMFOB	O.I.	C.G.	H.G.
14.8	99.4	35.2	At1g65860	842897	FMO GS-OX1 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 1)	belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates	O.I.	C.G.	H.G.

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GSM ID	GSM131643
Assay name	ATGE_2_A
GSE experiment	GSE5633: AtGenExpress: Developmental series (shoots and stems)

Microarray experiments to specifically-expressed genes

GSM ID GSM131643 Assay name ATGE_2_A GSE experiment GSE5633: AtGenExpress: Developmental series (shoots and stems)

GSM ID GSM131643

Assay name ATGE_2_A

GSE experiment GSE5633: AtGenExpress: Developmental series (shoots and stems)