CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM131641

Assay name ATGE_92_C

GSE experiment GSE5632: AtGenExpress: Developmental series (flowers and pollen)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
172.3 100.0 139.1 At1g61070 842399 LCR66 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 66) Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. O.I. C.G. H.G.
123.2 99.9 32.8 At4g29250 829046 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
105.0 99.9 73.8 At3g52160 824381 KCS15 (3-KETOACYL-COA SYNTHASE 15) Encodes KCS15, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
86.2 99.9 42.4 At1g20150 838605 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM O.I. C.G. H.G.
84.2 99.9 36.8 At1g71160 843456 KCS7 (3-KETOACYL-COA SYNTHASE 7) Encodes KCS7, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
80.0 99.9 79.8 At4g14815 827138 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;P O.I. C.G. H.G.
76.7 99.9 57.9 At1g74540 843795 CYP98A8 member of CYP98A O.I. C.G. H.G.
73.6 99.9 44.9 At3g23770 821959 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO O.I. C.G. H.G.
72.9 99.9 73.6 At1g13140 837871 CYP86C3 member of CYP86C O.I. C.G. H.G.
71.2 99.9 54.9 At2g19070 816424 SHT (SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE) encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091) O.I. C.G. H.G.
64.1 99.8 79.7 At5g48210 834874 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
60.0 99.8 55.4 At5g13380 831179 auxin-responsive GH3 family protein F:unknown;P:response to auxin stimulus;C:cellular_component unknown;OBPMF O.I. C.G. H.G.
58.8 99.8 30.9 At1g75790 843912 sks18 (SKU5 Similar 18) F:pectinesterase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA O.I. C.G. H.G.
58.2 99.8 184.3 At1g75910 843924 EXL4 member of Lipase proteins O.I. C.G. H.G.
57.6 99.8 99.2 At4g28395 828956 ATA7 related to lipid transfer proteins O.I. C.G. H.G.
57.2 99.8 68.1 At1g62940 842596 ACOS5 (ACYL-COA SYNTHETASE 5) encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile. O.I. C.G. H.G.
56.5 99.8 105.7 At4g37900 829946 glycine-rich protein F:unknown;P:biological_process unknown;C:cellular_component unknown;BMPOFVA O.I. C.G. H.G.
54.4 99.8 159.8 At3g25050 822096 XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3) encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment. O.I. C.G. H.G.
53.6 99.8 200.9 At1g68875 843220 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
53.1 99.8 77.7 At5g16960 831559 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:response to oxidative stress;C:unknown;BOMFPA O.I. C.G. H.G.
52.3 99.8 34.1 At2g16910 816194 AMS (ABORTED MICROSPORES) Sporophytic male sterile; MYC Transcription Factor O.I. C.G. H.G.
51.5 99.8 69.0 At1g20120 838601 family II extracellular lipase, putative F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMAV O.I. C.G. H.G.
50.2 99.8 68.7 At5g16920 831555 - F:molecular_function unknown;P:unknown;C:endomembrane system;PO O.I. C.G. H.G.
49.2 99.8 144.1 At1g33430 840236 galactosyltransferase family protein F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:pollen exine formation;C:endomembrane system, membrane;MPO O.I. C.G. H.G.
49.2 99.8 94.9 At2g03850 814911 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBOMFA O.I. C.G. H.G.
48.0 99.8 106.3 At1g06260 837137 cysteine proteinase, putative F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
46.6 99.8 19.7 At1g26710 839212 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
46.2 99.8 203.7 At1g75940 843927 ATA27 encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen. O.I. C.G. H.G.
46.2 99.8 53.6 At4g00040 828224 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, biosynthetic process, metabolic process;C:unknown;PBOF O.I. C.G. H.G.
45.4 99.8 82.8 At1g02813 839360 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
44.3 99.8 107.3 At5g50790 835151 nodulin MtN3 family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMOB O.I. C.G. H.G.
43.6 99.8 53.7 At1g75920 843925 family II extracellular lipase 5 (EXL5) F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM O.I. C.G. H.G.
42.9 99.8 65.2 At1g02050 839280 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOF O.I. C.G. H.G.
42.9 99.8 44.0 At4g29980 829121 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
42.5 99.8 212.6 At3g51590 824322 LTP12 (LIPID TRANSFER PROTEIN 12) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. O.I. C.G. H.G.
41.2 99.8 103.6 At1g58430 842212 RXF26 Encodes an anther-specific proline-rich protein. O.I. C.G. H.G.
41.0 99.8 137.8 At1g67990 843127 TSM1 Encodes a tapetum-specific O-methyltransferase. In vitro enzyme assay indicated activity with caffeoyl-CoA, caffeoyl glucose, chlorogenic acid and polyamine conjugates. RNAi mutants had impaired silique development and seed setting. O.I. C.G. H.G.
40.2 99.8 47.5 At1g23570 838967 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
39.4 99.8 42.6 At5g65205 836644 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
38.0 99.8 66.2 At1g61110 842404 anac025 (Arabidopsis NAC domain containing protein 25) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO O.I. C.G. H.G.
37.4 99.7 37.4 At1g74550 843796 CYP98A9 member of CYP98A O.I. C.G. H.G.
36.1 99.7 61.4 At3g59530 825122 strictosidine synthase family protein F:strictosidine synthase activity;P:alkaloid biosynthetic process, pollen exine formation;C:endomembrane system;BPMOFA O.I. C.G. H.G.
35.8 99.7 103.9 At4g14080 827044 MEE48 (maternal effect embryo arrest 48) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;PO O.I. C.G. H.G.
35.0 99.7 27.4 At3g23840 821967 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:chloroplast thylakoid membrane;PFB O.I. C.G. H.G.
34.7 99.7 89.3 At5g20740 832197 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
34.1 99.7 13.6 At5g62320 836353 ATMYB99 (MYB DOMAIN PROTEIN 99) Encodes a putative transcription factor (MYB99). O.I. C.G. H.G.
33.9 99.7 29.1 At3g06100 819783 NIP7 F:water channel activity;P:transport;C:membrane;BPMOFAV O.I. C.G. H.G.
33.6 99.7 20.8 At1g23560 838966 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
33.4 99.7 34.8 At4g16270 827322 peroxidase 40 (PER40) (P40) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. C.G. H.G.
32.6 99.7 49.2 At5g55720 835666 pectate lyase family protein F:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO O.I. C.G. H.G.
32.1 99.7 86.3 At3g18850 821418 LPAT5 F:acyltransferase activity;P:metabolic process;C:unknown;MBOFPV O.I. C.G. H.G.
32.0 99.7 69.2 At2g42990 818901 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
31.9 99.7 143.3 At1g47980 841216 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PB O.I. C.G. H.G.
31.9 99.7 25.4 At3g13220 820512 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMAFPV O.I. C.G. H.G.
31.6 99.7 18.7 At1g79780 844317 - F:molecular_function unknown;P:biological_process unknown;C:membrane;P O.I. C.G. H.G.
31.4 99.7 374.4 At1g66850 843003 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
30.8 99.7 65.8 At1g24070 839019 ATCSLA10 encodes a gene similar to cellulose synthase O.I. C.G. H.G.
29.1 99.7 52.9 At3g11980 820372 MS2 (MALE STERILITY 2) Similar to fatty acid reductases. O.I. C.G. H.G.
29.1 99.7 13.6 At5g49070 834966 KCS21 (3-KETOACYL-COA SYNTHASE 21) Encodes KCS21, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). O.I. C.G. H.G.
29.0 99.7 19.8 At1g21540 838755 AMP-binding protein, putative F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
28.9 99.7 76.1 At3g52130 824377 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
28.6 99.7 93.0 At1g24260 839040 SEP3 (SEPALLATA3) Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif. O.I. C.G. H.G.
28.1 99.7 61.0 At2g03740 814901 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBMOFA O.I. C.G. H.G.
27.9 99.7 47.3 At1g28375 839734 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
27.2 99.7 106.0 At5g07230 830614 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
27.0 99.7 23.3 At3g57620 824931 glyoxal oxidase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPOM O.I. C.G. H.G.
26.7 99.7 51.1 At1g12570 837814 glucose-methanol-choline (GMC) oxidoreductase family protein F:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVA O.I. C.G. H.G.
26.4 99.7 45.7 At5g07510 830644 GRP14 encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers. O.I. C.G. H.G.
26.3 99.7 57.8 At5g61605 836282 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
26.3 99.7 57.0 At4g21590 828245 ENDO3 (endonuclease 3) Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed in the floral meristem and during stamen development. O.I. C.G. H.G.
25.8 99.7 25.0 At5g45960 834636 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
25.6 99.7 58.3 At2g42200 818820 SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9) Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expresssion is regulated by MIR156b. O.I. C.G. H.G.
25.4 99.6 153.0 At5g07560 830649 GRP20 (GLYCINE-RICH PROTEIN 20) Lipid-binding oleosins, glycine-rich protein. O.I. C.G. H.G.
25.3 99.6 17.9 At4g00870 827990 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
25.2 99.6 11.1 At3g13662 820571 - F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P O.I. C.G. H.G.
25.0 99.6 252.8 At5g33370 833315 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
24.9 99.6 65.2 At1g54020 841840 myrosinase-associated protein, putative F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBM O.I. C.G. H.G.
24.6 99.6 72.5 At3g10570 820222 CYP77A6 member of CYP77A O.I. C.G. H.G.
24.6 99.6 55.9 At4g34850 829637 chalcone and stilbene synthase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOF O.I. C.G. H.G.
24.3 99.6 360.8 At2g20870 816620 cell wall protein precursor, putative F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPMF O.I. C.G. H.G.
24.2 99.6 45.5 At1g69500 843283 electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:pollen exine formation;C:cellular_component unknown;MPFBOAV O.I. C.G. H.G.
23.7 99.6 62.3 At4g20050 827750 QRT3 (QUARTET 3) Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development. O.I. C.G. H.G.
23.4 99.6 344.4 At3g15400 820779 ATA20 Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein. O.I. C.G. H.G.
23.4 99.6 153.6 At2g04570 814999 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
23.2 99.6 248.5 At3g28500 822480 60S acidic ribosomal protein P2 (RPP2C) F:structural constituent of ribosome;P:translational elongation;C:cytosol, cytosolic ribosome, ribosome, plasma membrane;MFOPAB O.I. C.G. H.G.
22.9 99.6 98.4 At4g20420 827790 tapetum-specific protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
22.6 99.6 114.3 At1g75930 843926 EXL6 member of Lipase proteins O.I. C.G. H.G.
22.6 99.6 113.4 At5g62080 836328 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
22.2 99.6 21.4 At2g35310 818098 transcriptional factor B3 family protein F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P O.I. C.G. H.G.
21.8 99.6 60.7 At3g07450 819933 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
21.7 99.6 80.3 At1g11850 837732 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBPOFVA O.I. C.G. H.G.
21.7 99.6 50.1 At1g75030 843841 ATLP-3 encodes a PR5-like protein O.I. C.G. H.G.
21.5 99.6 64.1 At4g35420 829695 dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family F:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAV O.I. C.G. H.G.
21.4 99.6 285.3 At5g07550 830648 GRP19 (GLYCINE-RICH PROTEIN 19) member of Oleosin-like protein family O.I. C.G. H.G.
21.2 99.6 13.4 At4g04760 825812 sugar transporter family protein F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA O.I. C.G. H.G.
21.1 99.6 41.7 At1g63710 842675 CYP86A7 Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at highest level in mature stems and flowers. O.I. C.G. H.G.
21.0 99.6 73.8 At1g69120 843244 AP1 (APETALA1) Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24. O.I. C.G. H.G.
20.9 99.6 96.9 At5g23940 832459 EMB3009 (embryo defective 3009) F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PFBO O.I. C.G. H.G.
20.8 99.6 50.8 At1g68540 843183 oxidoreductase family protein F:coenzyme binding, oxidoreductase activity, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:cellular_component unknown;BOPFMAV O.I. C.G. H.G.
20.8 99.6 46.8 At2g41040 818703 methyltransferase-related F:methyltransferase activity;P:metabolic process;C:chloroplast, plastoglobule;BOAPFM O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
172.3	100.0	139.1	At1g61070	842399	LCR66 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 66)	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.	O.I.	C.G.	H.G.
123.2	99.9	32.8	At4g29250	829046	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
105.0	99.9	73.8	At3g52160	824381	KCS15 (3-KETOACYL-COA SYNTHASE 15)	Encodes KCS15, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
86.2	99.9	42.4	At1g20150	838605	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM	O.I.	C.G.	H.G.
84.2	99.9	36.8	At1g71160	843456	KCS7 (3-KETOACYL-COA SYNTHASE 7)	Encodes KCS7, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
80.0	99.9	79.8	At4g14815	827138	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:anchored to membrane;P	O.I.	C.G.	H.G.
76.7	99.9	57.9	At1g74540	843795	CYP98A8	member of CYP98A	O.I.	C.G.	H.G.
73.6	99.9	44.9	At3g23770	821959	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO	O.I.	C.G.	H.G.
72.9	99.9	73.6	At1g13140	837871	CYP86C3	member of CYP86C	O.I.	C.G.	H.G.
71.2	99.9	54.9	At2g19070	816424	SHT (SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE)	encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091)	O.I.	C.G.	H.G.
64.1	99.8	79.7	At5g48210	834874	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
60.0	99.8	55.4	At5g13380	831179	auxin-responsive GH3 family protein	F:unknown;P:response to auxin stimulus;C:cellular_component unknown;OBPMF	O.I.	C.G.	H.G.
58.8	99.8	30.9	At1g75790	843912	sks18 (SKU5 Similar 18)	F:pectinesterase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA	O.I.	C.G.	H.G.
58.2	99.8	184.3	At1g75910	843924	EXL4	member of Lipase proteins	O.I.	C.G.	H.G.
57.6	99.8	99.2	At4g28395	828956	ATA7	related to lipid transfer proteins	O.I.	C.G.	H.G.
57.2	99.8	68.1	At1g62940	842596	ACOS5 (ACYL-COA SYNTHETASE 5)	encodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.	O.I.	C.G.	H.G.
56.5	99.8	105.7	At4g37900	829946	glycine-rich protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;BMPOFVA	O.I.	C.G.	H.G.
54.4	99.8	159.8	At3g25050	822096	XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3)	encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment.	O.I.	C.G.	H.G.
53.6	99.8	200.9	At1g68875	843220	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
53.1	99.8	77.7	At5g16960	831559	NADP-dependent oxidoreductase, putative	F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:response to oxidative stress;C:unknown;BOMFPA	O.I.	C.G.	H.G.
52.3	99.8	34.1	At2g16910	816194	AMS (ABORTED MICROSPORES)	Sporophytic male sterile; MYC Transcription Factor	O.I.	C.G.	H.G.
51.5	99.8	69.0	At1g20120	838601	family II extracellular lipase, putative	F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMAV	O.I.	C.G.	H.G.
50.2	99.8	68.7	At5g16920	831555	-	F:molecular_function unknown;P:unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
49.2	99.8	144.1	At1g33430	840236	galactosyltransferase family protein	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:pollen exine formation;C:endomembrane system, membrane;MPO	O.I.	C.G.	H.G.
49.2	99.8	94.9	At2g03850	814911	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBOMFA	O.I.	C.G.	H.G.
48.0	99.8	106.3	At1g06260	837137	cysteine proteinase, putative	F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
46.6	99.8	19.7	At1g26710	839212	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
46.2	99.8	203.7	At1g75940	843927	ATA27	encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen.	O.I.	C.G.	H.G.
46.2	99.8	53.6	At4g00040	828224	chalcone and stilbene synthase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, biosynthetic process, metabolic process;C:unknown;PBOF	O.I.	C.G.	H.G.
45.4	99.8	82.8	At1g02813	839360	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
44.3	99.8	107.3	At5g50790	835151	nodulin MtN3 family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMOB	O.I.	C.G.	H.G.
43.6	99.8	53.7	At1g75920	843925	family II extracellular lipase 5 (EXL5)	F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM	O.I.	C.G.	H.G.
42.9	99.8	65.2	At1g02050	839280	chalcone and stilbene synthase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:unknown;PBOF	O.I.	C.G.	H.G.
42.9	99.8	44.0	At4g29980	829121	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
42.5	99.8	212.6	At3g51590	824322	LTP12 (LIPID TRANSFER PROTEIN 12)	Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.	O.I.	C.G.	H.G.
41.2	99.8	103.6	At1g58430	842212	RXF26	Encodes an anther-specific proline-rich protein.	O.I.	C.G.	H.G.
41.0	99.8	137.8	At1g67990	843127	TSM1	Encodes a tapetum-specific O-methyltransferase. In vitro enzyme assay indicated activity with caffeoyl-CoA, caffeoyl glucose, chlorogenic acid and polyamine conjugates. RNAi mutants had impaired silique development and seed setting.	O.I.	C.G.	H.G.
40.2	99.8	47.5	At1g23570	838967	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
39.4	99.8	42.6	At5g65205	836644	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
38.0	99.8	66.2	At1g61110	842404	anac025 (Arabidopsis NAC domain containing protein 25)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
37.4	99.7	37.4	At1g74550	843796	CYP98A9	member of CYP98A	O.I.	C.G.	H.G.
36.1	99.7	61.4	At3g59530	825122	strictosidine synthase family protein	F:strictosidine synthase activity;P:alkaloid biosynthetic process, pollen exine formation;C:endomembrane system;BPMOFA	O.I.	C.G.	H.G.
35.8	99.7	103.9	At4g14080	827044	MEE48 (maternal effect embryo arrest 48)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:embryonic development ending in seed dormancy, pollen exine formation;C:endomembrane system;PO	O.I.	C.G.	H.G.
35.0	99.7	27.4	At3g23840	821967	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:chloroplast thylakoid membrane;PFB	O.I.	C.G.	H.G.
34.7	99.7	89.3	At5g20740	832197	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
34.1	99.7	13.6	At5g62320	836353	ATMYB99 (MYB DOMAIN PROTEIN 99)	Encodes a putative transcription factor (MYB99).	O.I.	C.G.	H.G.
33.9	99.7	29.1	At3g06100	819783	NIP7	F:water channel activity;P:transport;C:membrane;BPMOFAV	O.I.	C.G.	H.G.
33.6	99.7	20.8	At1g23560	838966	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
33.4	99.7	34.8	At4g16270	827322	peroxidase 40 (PER40) (P40)	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM	O.I.	C.G.	H.G.
32.6	99.7	49.2	At5g55720	835666	pectate lyase family protein	F:lyase activity, pectate lyase activity;P:biological_process unknown;C:endomembrane system;BPFO	O.I.	C.G.	H.G.
32.1	99.7	86.3	At3g18850	821418	LPAT5	F:acyltransferase activity;P:metabolic process;C:unknown;MBOFPV	O.I.	C.G.	H.G.
32.0	99.7	69.2	At2g42990	818901	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
31.9	99.7	143.3	At1g47980	841216	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PB	O.I.	C.G.	H.G.
31.9	99.7	25.4	At3g13220	820512	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
31.6	99.7	18.7	At1g79780	844317	-	F:molecular_function unknown;P:biological_process unknown;C:membrane;P	O.I.	C.G.	H.G.
31.4	99.7	374.4	At1g66850	843003	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
30.8	99.7	65.8	At1g24070	839019	ATCSLA10	encodes a gene similar to cellulose synthase	O.I.	C.G.	H.G.
29.1	99.7	52.9	At3g11980	820372	MS2 (MALE STERILITY 2)	Similar to fatty acid reductases.	O.I.	C.G.	H.G.
29.1	99.7	13.6	At5g49070	834966	KCS21 (3-KETOACYL-COA SYNTHASE 21)	Encodes KCS21, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).	O.I.	C.G.	H.G.
29.0	99.7	19.8	At1g21540	838755	AMP-binding protein, putative	F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
28.9	99.7	76.1	At3g52130	824377	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
28.6	99.7	93.0	At1g24260	839040	SEP3 (SEPALLATA3)	Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.	O.I.	C.G.	H.G.
28.1	99.7	61.0	At2g03740	814901	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBMOFA	O.I.	C.G.	H.G.
27.9	99.7	47.3	At1g28375	839734	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
27.2	99.7	106.0	At5g07230	830614	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
27.0	99.7	23.3	At3g57620	824931	glyoxal oxidase-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BFPOM	O.I.	C.G.	H.G.
26.7	99.7	51.1	At1g12570	837814	glucose-methanol-choline (GMC) oxidoreductase family protein	F:aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding;P:cellular alcohol metabolic process;C:endomembrane system;OBFMPVA	O.I.	C.G.	H.G.
26.4	99.7	45.7	At5g07510	830644	GRP14	encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers.	O.I.	C.G.	H.G.
26.3	99.7	57.8	At5g61605	836282	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
26.3	99.7	57.0	At4g21590	828245	ENDO3 (endonuclease 3)	Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed in the floral meristem and during stamen development.	O.I.	C.G.	H.G.
25.8	99.7	25.0	At5g45960	834636	GDSL-motif lipase/hydrolase family protein	F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
25.6	99.7	58.3	At2g42200	818820	SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9)	Encodes a putative transcriptional regulator that is involved in the vegetative to reproductive phase transition. Expresssion is regulated by MIR156b.	O.I.	C.G.	H.G.
25.4	99.6	153.0	At5g07560	830649	GRP20 (GLYCINE-RICH PROTEIN 20)	Lipid-binding oleosins, glycine-rich protein.	O.I.	C.G.	H.G.
25.3	99.6	17.9	At4g00870	827990	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
25.2	99.6	11.1	At3g13662	820571	-	F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
25.0	99.6	252.8	At5g33370	833315	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
24.9	99.6	65.2	At1g54020	841840	myrosinase-associated protein, putative	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBM	O.I.	C.G.	H.G.
24.6	99.6	72.5	At3g10570	820222	CYP77A6	member of CYP77A	O.I.	C.G.	H.G.
24.6	99.6	55.9	At4g34850	829637	chalcone and stilbene synthase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity;P:phenylpropanoid biosynthetic process, pollen exine formation;C:cellular_component unknown;PBOF	O.I.	C.G.	H.G.
24.3	99.6	360.8	At2g20870	816620	cell wall protein precursor, putative	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPMF	O.I.	C.G.	H.G.
24.2	99.6	45.5	At1g69500	843283	electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding	F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:pollen exine formation;C:cellular_component unknown;MPFBOAV	O.I.	C.G.	H.G.
23.7	99.6	62.3	At4g20050	827750	QRT3 (QUARTET 3)	Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development.	O.I.	C.G.	H.G.
23.4	99.6	344.4	At3g15400	820779	ATA20	Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein.	O.I.	C.G.	H.G.
23.4	99.6	153.6	At2g04570	814999	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
23.2	99.6	248.5	At3g28500	822480	60S acidic ribosomal protein P2 (RPP2C)	F:structural constituent of ribosome;P:translational elongation;C:cytosol, cytosolic ribosome, ribosome, plasma membrane;MFOPAB	O.I.	C.G.	H.G.
22.9	99.6	98.4	At4g20420	827790	tapetum-specific protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
22.6	99.6	114.3	At1g75930	843926	EXL6	member of Lipase proteins	O.I.	C.G.	H.G.
22.6	99.6	113.4	At5g62080	836328	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
22.2	99.6	21.4	At2g35310	818098	transcriptional factor B3 family protein	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P	O.I.	C.G.	H.G.
21.8	99.6	60.7	At3g07450	819933	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
21.7	99.6	80.3	At1g11850	837732	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBPOFVA	O.I.	C.G.	H.G.
21.7	99.6	50.1	At1g75030	843841	ATLP-3	encodes a PR5-like protein	O.I.	C.G.	H.G.
21.5	99.6	64.1	At4g35420	829695	dihydroflavonol 4-reductase family / dihydrokaempferol 4-reductase family	F:coenzyme binding, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:endomembrane system;BOPFMAV	O.I.	C.G.	H.G.
21.4	99.6	285.3	At5g07550	830648	GRP19 (GLYCINE-RICH PROTEIN 19)	member of Oleosin-like protein family	O.I.	C.G.	H.G.
21.2	99.6	13.4	At4g04760	825812	sugar transporter family protein	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BFMPOA	O.I.	C.G.	H.G.
21.1	99.6	41.7	At1g63710	842675	CYP86A7	Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at highest level in mature stems and flowers.	O.I.	C.G.	H.G.
21.0	99.6	73.8	At1g69120	843244	AP1 (APETALA1)	Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies floral meristem and sepal identity. Required for the transcriptional activation of AGAMOUS. Interacts with LEAFY.Binds to promoter and regulates the expression of flowering time genes SVP, SOC1 and AGL24.	O.I.	C.G.	H.G.
20.9	99.6	96.9	At5g23940	832459	EMB3009 (embryo defective 3009)	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PFBO	O.I.	C.G.	H.G.
20.8	99.6	50.8	At1g68540	843183	oxidoreductase family protein	F:coenzyme binding, oxidoreductase activity, binding, catalytic activity;P:cellular metabolic process, metabolic process;C:cellular_component unknown;BOPFMAV	O.I.	C.G.	H.G.
20.8	99.6	46.8	At2g41040	818703	methyltransferase-related	F:methyltransferase activity;P:metabolic process;C:chloroplast, plastoglobule;BOAPFM	O.I.	C.G.	H.G.

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GSM ID	GSM131641
Assay name	ATGE_92_C
GSE experiment	GSE5632: AtGenExpress: Developmental series (flowers and pollen)

Microarray experiments to specifically-expressed genes

GSM ID GSM131641 Assay name ATGE_92_C GSE experiment GSE5632: AtGenExpress: Developmental series (flowers and pollen)

GSM ID GSM131641

Assay name ATGE_92_C

GSE experiment GSE5632: AtGenExpress: Developmental series (flowers and pollen)