CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM131616

Assay name ATGE_53_B

GSE experiment GSE5632: AtGenExpress: Developmental series (flowers and pollen)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
81.6 99.9 148.0 At5g07540 830647 GRP16 (GLYCINE-RICH PROTEIN 16) encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12). O.I. C.G. H.G.
81.0 99.9 76.3 At2g21220 816659 auxin-responsive protein, putative F:calmodulin binding;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
66.7 99.8 106.7 At1g54020 841840 myrosinase-associated protein, putative F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBM O.I. C.G. H.G.
64.3 99.8 24.3 At1g23590 838969 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
61.2 99.8 144.4 At1g23240 838933 caleosin-related family protein F:lipase activity, calcium ion binding;P:unknown;C:extracellular region;PFO O.I. C.G. H.G.
57.7 99.8 73.1 At1g20120 838601 family II extracellular lipase, putative F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMAV O.I. C.G. H.G.
55.7 99.8 180.3 At1g75910 843924 EXL4 member of Lipase proteins O.I. C.G. H.G.
51.2 99.8 155.2 At3g25050 822096 XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3) encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment. O.I. C.G. H.G.
49.4 99.8 78.3 At3g57810 824950 OTU-like cysteine protease family protein F:cysteine-type peptidase activity;P:biological_process unknown;C:unknown;MPOF O.I. C.G. H.G.
49.3 99.8 212.9 At5g07560 830649 GRP20 (GLYCINE-RICH PROTEIN 20) Lipid-binding oleosins, glycine-rich protein. O.I. C.G. H.G.
46.9 99.8 77.1 At5g61605 836282 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
46.7 99.8 81.0 At1g24070 839019 ATCSLA10 encodes a gene similar to cellulose synthase O.I. C.G. H.G.
46.4 99.8 28.6 At3g52810 824447 PAP21 (PURPLE ACID PHOSPHATASE 21) F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBMOFA O.I. C.G. H.G.
46.1 99.8 60.8 At1g28375 839734 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
43.8 99.8 49.6 At1g23570 838967 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
40.9 99.8 46.8 At5g07520 830645 GRP18 (GLYCINE-RICH PROTEIN 18) encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12). O.I. C.G. H.G.
40.6 99.8 104.3 At1g78960 844236 ATLUP2 Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin. O.I. C.G. H.G.
40.4 99.8 257.8 At5g07530 830646 GRP17 (GLYCINE RICH PROTEIN 17) encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat. O.I. C.G. H.G.
38.6 99.8 79.5 At4g20050 827750 QRT3 (QUARTET 3) Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development. O.I. C.G. H.G.
38.1 99.8 102.2 At2g39330 818518 JAL23 (JACALIN-RELATED LECTIN 23) F:molecular_function unknown;P:biological_process unknown;C:vacuole;POF O.I. C.G. H.G.
37.9 99.8 90.0 At3g10570 820222 CYP77A6 member of CYP77A O.I. C.G. H.G.
37.8 99.8 69.3 At4g20320 827780 CTP synthase/ catalytic F:CTP synthase activity, catalytic activity;P:pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process;C:cellular_component unknown;OBMFAP O.I. C.G. H.G.
37.7 99.7 147.8 At1g75930 843926 EXL6 member of Lipase proteins O.I. C.G. H.G.
37.1 99.7 23.7 At1g23670 838977 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
36.6 99.7 54.5 At3g26125 822212 CYP86C2 encodes a protein with cytochrome P450 domain O.I. C.G. H.G.
35.1 99.7 75.6 At2g23800 816912 GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2) encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthase O.I. C.G. H.G.
34.9 99.7 81.2 At4g16590 827360 ATCSLA01 encodes a gene similar to cellulose synthase O.I. C.G. H.G.
31.3 99.7 71.2 At4g29700 829091 type I phosphodiesterase/nucleotide pyrophosphatase family protein F:hydrolase activity, catalytic activity;P:metabolic process, nucleotide metabolic process;C:vacuole;MBOFPAV O.I. C.G. H.G.
31.2 99.7 68.1 At1g02190 839541 CER1 protein, putative F:oxidoreductase activity, iron ion binding, catalytic activity;P:oxidation reduction, fatty acid biosynthetic process;C:endoplasmic reticulum;BOPFMV O.I. C.G. H.G.
31.1 99.7 27.5 At5g45960 834636 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
31.0 99.7 343.6 At5g07550 830648 GRP19 (GLYCINE-RICH PROTEIN 19) member of Oleosin-like protein family O.I. C.G. H.G.
29.6 99.7 83.4 At1g06260 837137 cysteine proteinase, putative F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
29.5 99.7 246.4 At4g04460 825776 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis, lipid metabolic process;C:endomembrane system;MFOPB O.I. C.G. H.G.
29.1 99.7 157.2 At4g11760 826782 LCR17 (Low-molecular-weight cysteine-rich 17) Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family. O.I. C.G. H.G.
29.1 99.7 42.4 At2g12480 815721 serine carboxypeptidase S10 family protein F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
29.1 99.7 19.8 At1g21540 838755 AMP-binding protein, putative F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
29.0 99.7 360.2 At1g66850 843003 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
28.9 99.7 393.4 At2g20870 816620 cell wall protein precursor, putative F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPMF O.I. C.G. H.G.
28.8 99.7 56.0 At1g75880 843921 family II extracellular lipase 1 (EXL1) F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM O.I. C.G. H.G.
28.6 99.7 18.2 At4g39010 830056 AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18) F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF O.I. C.G. H.G.
28.4 99.7 9.0 At3g55100 824676 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPV O.I. C.G. H.G.
28.2 99.7 33.0 At1g16705 838241 p300/CBP acetyltransferase-related protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
28.1 99.7 158.8 At1g75940 843927 ATA27 encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen. O.I. C.G. H.G.
27.8 99.7 172.0 At3g51590 824322 LTP12 (LIPID TRANSFER PROTEIN 12) Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. O.I. C.G. H.G.
27.5 99.7 18.8 At1g23600 838970 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
26.8 99.7 14.4 At1g06250 837135 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POFBMV O.I. C.G. H.G.
26.3 99.7 33.7 At1g15360 838105 SHN1 (SHINE 1) Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2. O.I. C.G. H.G.
26.1 99.7 56.5 At1g66350 842953 RGL1 (RGA-LIKE 1) Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development. O.I. C.G. H.G.
25.9 99.7 44.6 At3g21970 821756 receptor-like protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
25.5 99.7 54.2 At1g61110 842404 anac025 (Arabidopsis NAC domain containing protein 25) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO O.I. C.G. H.G.
25.4 99.6 73.4 At5g62850 836406 AtVEX1 (VEGETATIVE CELL EXPRESSED1) Encodes a protein that is expressed in vegetative cells of pollen. O.I. C.G. H.G.
25.0 99.6 26.3 At5g02190 831845 PCS1 (PROMOTION OF CELL SURVIVAL 1) encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage. O.I. C.G. H.G.
24.0 99.6 302.2 At1g72260 843558 THI2.1 (THIONIN 2.1) Encodes a thionin which is a cysteine rich protein having antimicrobial properties. Thi2.1 is expressed in response to a variety of pathogens and induced by ethylene and jasmonic acid. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. O.I. C.G. H.G.
23.9 99.6 278.6 At1g52030 841632 MBP2 (MYROSINASE-BINDING PROTEIN 2) Similar to myrosinase binding proteins which may be involved in metabolizing glucosinolates and forming defense compounds to protect against herbivory. Also similar to lectins and other agglutinating factors. Expressed only in flowers. O.I. C.G. H.G.
23.9 99.6 84.9 At1g24260 839040 SEP3 (SEPALLATA3) Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif. O.I. C.G. H.G.
23.9 99.6 42.1 At1g13140 837871 CYP86C3 member of CYP86C O.I. C.G. H.G.
23.8 99.6 42.9 At2g27880 817334 AGO5 (ARGONAUTE 5) F:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBV O.I. C.G. H.G.
23.6 99.6 83.8 At1g11850 837732 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBPOFVA O.I. C.G. H.G.
23.3 99.6 175.7 At3g28840 822516 unknown protein F:unknown;P:unknown;C:endomembrane system;BOMPFVA O.I. C.G. H.G.
22.9 99.6 51.4 At3g03450 821251 RGL2 (RGA-LIKE 2) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development. O.I. C.G. H.G.
22.4 99.6 337.0 At3g15400 820779 ATA20 Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein. O.I. C.G. H.G.
22.4 99.6 38.5 At1g75920 843925 family II extracellular lipase 5 (EXL5) F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM O.I. C.G. H.G.
22.3 99.6 168.6 At5g24420 832513 glucosamine/galactosamine-6-phosphate isomerase-related F:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFP O.I. C.G. H.G.
22.3 99.6 57.8 At2g42990 818901 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
22.1 99.6 38.6 At3g60160 825186 ATMRP9 member of MRP subfamily O.I. C.G. H.G.
21.8 99.6 38.2 At2g45600 819168 hydrolase F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOPMFAV O.I. C.G. H.G.
21.7 99.6 41.4 At5g07510 830644 GRP14 encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers. O.I. C.G. H.G.
21.6 99.6 41.4 At4g14815 827138 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;P O.I. C.G. H.G.
21.4 99.6 16.1 At1g23580 838968 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
21.3 99.6 42.4 At1g28430 839741 CYP705A24 member of CYP705A O.I. C.G. H.G.
21.0 99.6 64.4 At4g37900 829946 glycine-rich protein F:unknown;P:biological_process unknown;C:cellular_component unknown;BMPOFVA O.I. C.G. H.G.
20.6 99.6 146.6 At4g02290 828080 AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13) F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF O.I. C.G. H.G.
20.3 99.6 17.1 At3g21920 821747 pollen coat receptor kinase, putative F:molecular_function unknown;P:biological_process unknown;C:extracellular region;P O.I. C.G. H.G.
20.3 99.6 10.0 At3g13662 820571 - F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P O.I. C.G. H.G.
20.2 99.6 10.9 At1g23690 838979 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
20.1 99.6 22.9 At1g60060 842300 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPFMB O.I. C.G. H.G.
20.0 99.6 20.5 At3g04960 819656 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
19.9 99.6 21.3 At1g13150 837873 CYP86C4 member of CYP86C O.I. C.G. H.G.
19.8 99.6 12.8 At1g26710 839212 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
19.6 99.6 12.3 At1g06990 837209 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
19.5 99.6 69.5 At2g38110 818389 GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6) Encodes a protein with glycerol-3-phosphate acyltransferase activity. O.I. C.G. H.G.
19.4 99.6 16.7 At5g22980 832362 scpl47 (serine carboxypeptidase-like 47) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
19.0 99.5 220.5 At5g33370 833315 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
18.9 99.5 92.1 At5g23940 832459 EMB3009 (embryo defective 3009) F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PFBO O.I. C.G. H.G.
18.7 99.5 118.7 At1g68875 843220 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
18.5 99.5 92.2 At5g44300 834453 dormancy/auxin associated family protein F:molecular_function unknown;P:unknown;C:unknown;P O.I. C.G. H.G.
18.4 99.5 127.4 At1g18280 838408 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;POBM O.I. C.G. H.G.
18.2 99.5 77.6 At5g44620 834490 CYP706A3 member of CYP706A O.I. C.G. H.G.
18.1 99.5 75.3 At5g08540 830754 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast, chloroplast envelope;PO O.I. C.G. H.G.
18.1 99.5 27.7 At2g19070 816424 SHT (SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE) encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091) O.I. C.G. H.G.
18.1 99.5 15.6 At1g13130 837870 glycosyl hydrolase family 5 protein / cellulase family protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BPFO O.I. C.G. H.G.
18.0 99.5 47.3 At1g24400 839057 LHT2 (LYSINE HISTIDINE TRANSPORTER 2) High-affinity transporter for neutral and acidic amino acids, expressed in tapetum tissue of anthers O.I. C.G. H.G.
17.7 99.5 115.4 At4g08670 826433 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;OPMBFV O.I. C.G. H.G.
17.7 99.5 57.0 At2g03850 814911 late embryogenesis abundant domain-containing protein / LEA domain-containing protein F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBOMFA O.I. C.G. H.G.
17.6 99.5 110.1 At3g28780 822510 unknown protein F:molecular_function unknown;P:pollen exine formation;C:endomembrane system;BOMPFVA O.I. C.G. H.G.
17.6 99.5 3.7 At1g23630 - - O.I. C.G. H.G.
17.3 99.5 41.5 At4g30500 829173 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP O.I. C.G. H.G.
17.2 99.5 62.7 At1g22760 838882 PAB3 (POLY(A) BINDING PROTEIN 3) Putative poly(A) binding protein May there fore function in posttranscriptional regulation, including mRNA turnover and translational initiation. Expression detected only in floral organs. O.I. C.G. H.G.
17.0 99.5 164.3 At5g22430 832304 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
17.0 99.5 8.8 At1g23250 838934 calcium ion binding F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PFO O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
81.6	99.9	148.0	At5g07540	830647	GRP16 (GLYCINE-RICH PROTEIN 16)	encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stages 11 and 12).	O.I.	C.G.	H.G.
81.0	99.9	76.3	At2g21220	816659	auxin-responsive protein, putative	F:calmodulin binding;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
66.7	99.8	106.7	At1g54020	841840	myrosinase-associated protein, putative	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBM	O.I.	C.G.	H.G.
64.3	99.8	24.3	At1g23590	838969	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
61.2	99.8	144.4	At1g23240	838933	caleosin-related family protein	F:lipase activity, calcium ion binding;P:unknown;C:extracellular region;PFO	O.I.	C.G.	H.G.
57.7	99.8	73.1	At1g20120	838601	family II extracellular lipase, putative	F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFMAV	O.I.	C.G.	H.G.
55.7	99.8	180.3	At1g75910	843924	EXL4	member of Lipase proteins	O.I.	C.G.	H.G.
51.2	99.8	155.2	At3g25050	822096	XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3)	encodes a xyloglucan endotransglucosylase/hydrolase. Higher expression in flowers and in response to IAA treatment.	O.I.	C.G.	H.G.
49.4	99.8	78.3	At3g57810	824950	OTU-like cysteine protease family protein	F:cysteine-type peptidase activity;P:biological_process unknown;C:unknown;MPOF	O.I.	C.G.	H.G.
49.3	99.8	212.9	At5g07560	830649	GRP20 (GLYCINE-RICH PROTEIN 20)	Lipid-binding oleosins, glycine-rich protein.	O.I.	C.G.	H.G.
46.9	99.8	77.1	At5g61605	836282	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
46.7	99.8	81.0	At1g24070	839019	ATCSLA10	encodes a gene similar to cellulose synthase	O.I.	C.G.	H.G.
46.4	99.8	28.6	At3g52810	824447	PAP21 (PURPLE ACID PHOSPHATASE 21)	F:protein serine/threonine phosphatase activity, acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBMOFA	O.I.	C.G.	H.G.
46.1	99.8	60.8	At1g28375	839734	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
43.8	99.8	49.6	At1g23570	838967	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
40.9	99.8	46.8	At5g07520	830645	GRP18 (GLYCINE-RICH PROTEIN 18)	encodes a glycine-rich protein that is expressed only in flowers during a specific developmental stage (flower stage 12).	O.I.	C.G.	H.G.
40.6	99.8	104.3	At1g78960	844236	ATLUP2	Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.	O.I.	C.G.	H.G.
40.4	99.8	257.8	At5g07530	830646	GRP17 (GLYCINE RICH PROTEIN 17)	encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat.	O.I.	C.G.	H.G.
38.6	99.8	79.5	At4g20050	827750	QRT3 (QUARTET 3)	Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development.	O.I.	C.G.	H.G.
38.1	99.8	102.2	At2g39330	818518	JAL23 (JACALIN-RELATED LECTIN 23)	F:molecular_function unknown;P:biological_process unknown;C:vacuole;POF	O.I.	C.G.	H.G.
37.9	99.8	90.0	At3g10570	820222	CYP77A6	member of CYP77A	O.I.	C.G.	H.G.
37.8	99.8	69.3	At4g20320	827780	CTP synthase/ catalytic	F:CTP synthase activity, catalytic activity;P:pyrimidine ribonucleotide metabolic process, pyrimidine nucleotide biosynthetic process;C:cellular_component unknown;OBMFAP	O.I.	C.G.	H.G.
37.7	99.7	147.8	At1g75930	843926	EXL6	member of Lipase proteins	O.I.	C.G.	H.G.
37.1	99.7	23.7	At1g23670	838977	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
36.6	99.7	54.5	At3g26125	822212	CYP86C2	encodes a protein with cytochrome P450 domain	O.I.	C.G.	H.G.
35.1	99.7	75.6	At2g23800	816912	GGPS2 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2)	encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthase	O.I.	C.G.	H.G.
34.9	99.7	81.2	At4g16590	827360	ATCSLA01	encodes a gene similar to cellulose synthase	O.I.	C.G.	H.G.
31.3	99.7	71.2	At4g29700	829091	type I phosphodiesterase/nucleotide pyrophosphatase family protein	F:hydrolase activity, catalytic activity;P:metabolic process, nucleotide metabolic process;C:vacuole;MBOFPAV	O.I.	C.G.	H.G.
31.2	99.7	68.1	At1g02190	839541	CER1 protein, putative	F:oxidoreductase activity, iron ion binding, catalytic activity;P:oxidation reduction, fatty acid biosynthetic process;C:endoplasmic reticulum;BOPFMV	O.I.	C.G.	H.G.
31.1	99.7	27.5	At5g45960	834636	GDSL-motif lipase/hydrolase family protein	F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
31.0	99.7	343.6	At5g07550	830648	GRP19 (GLYCINE-RICH PROTEIN 19)	member of Oleosin-like protein family	O.I.	C.G.	H.G.
29.6	99.7	83.4	At1g06260	837137	cysteine proteinase, putative	F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
29.5	99.7	246.4	At4g04460	825776	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis, lipid metabolic process;C:endomembrane system;MFOPB	O.I.	C.G.	H.G.
29.1	99.7	157.2	At4g11760	826782	LCR17 (Low-molecular-weight cysteine-rich 17)	Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.	O.I.	C.G.	H.G.
29.1	99.7	42.4	At2g12480	815721	serine carboxypeptidase S10 family protein	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
29.1	99.7	19.8	At1g21540	838755	AMP-binding protein, putative	F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
29.0	99.7	360.2	At1g66850	843003	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
28.9	99.7	393.4	At2g20870	816620	cell wall protein precursor, putative	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPMF	O.I.	C.G.	H.G.
28.8	99.7	56.0	At1g75880	843921	family II extracellular lipase 1 (EXL1)	F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM	O.I.	C.G.	H.G.
28.6	99.7	18.2	At4g39010	830056	AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18)	F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF	O.I.	C.G.	H.G.
28.4	99.7	9.0	At3g55100	824676	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
28.2	99.7	33.0	At1g16705	838241	p300/CBP acetyltransferase-related protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
28.1	99.7	158.8	At1g75940	843927	ATA27	encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen.	O.I.	C.G.	H.G.
27.8	99.7	172.0	At3g51590	824322	LTP12 (LIPID TRANSFER PROTEIN 12)	Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The LTP12 promoter is active exclusively in the tapetum during the uninucleate microspore and bicellular pollen stages. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.	O.I.	C.G.	H.G.
27.5	99.7	18.8	At1g23600	838970	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
26.8	99.7	14.4	At1g06250	837135	lipase class 3 family protein	F:triacylglycerol lipase activity;P:lipid metabolic process;C:cellular_component unknown;POFBMV	O.I.	C.G.	H.G.
26.3	99.7	33.7	At1g15360	838105	SHN1 (SHINE 1)	Encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. This gene is involved in wax biosynthesis. Over-expression of the gene results in glossy leaf phenotype and increased drought tolerance. Two closely related genes, AT5G25390 and AT5G11190 have similar phenotypes when over-expressed. Strong expression levels in flowers. Binds to the promoter of LACS2.	O.I.	C.G.	H.G.
26.1	99.7	56.5	At1g66350	842953	RGL1 (RGA-LIKE 1)	Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development.	O.I.	C.G.	H.G.
25.9	99.7	44.6	At3g21970	821756	receptor-like protein kinase-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
25.5	99.7	54.2	At1g61110	842404	anac025 (Arabidopsis NAC domain containing protein 25)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
25.4	99.6	73.4	At5g62850	836406	AtVEX1 (VEGETATIVE CELL EXPRESSED1)	Encodes a protein that is expressed in vegetative cells of pollen.	O.I.	C.G.	H.G.
25.0	99.6	26.3	At5g02190	831845	PCS1 (PROMOTION OF CELL SURVIVAL 1)	encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage.	O.I.	C.G.	H.G.
24.0	99.6	302.2	At1g72260	843558	THI2.1 (THIONIN 2.1)	Encodes a thionin which is a cysteine rich protein having antimicrobial properties. Thi2.1 is expressed in response to a variety of pathogens and induced by ethylene and jasmonic acid. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.	O.I.	C.G.	H.G.
23.9	99.6	278.6	At1g52030	841632	MBP2 (MYROSINASE-BINDING PROTEIN 2)	Similar to myrosinase binding proteins which may be involved in metabolizing glucosinolates and forming defense compounds to protect against herbivory. Also similar to lectins and other agglutinating factors. Expressed only in flowers.	O.I.	C.G.	H.G.
23.9	99.6	84.9	At1g24260	839040	SEP3 (SEPALLATA3)	Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.	O.I.	C.G.	H.G.
23.9	99.6	42.1	At1g13140	837871	CYP86C3	member of CYP86C	O.I.	C.G.	H.G.
23.8	99.6	42.9	At2g27880	817334	AGO5 (ARGONAUTE 5)	F:nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBV	O.I.	C.G.	H.G.
23.6	99.6	83.8	At1g11850	837732	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBPOFVA	O.I.	C.G.	H.G.
23.3	99.6	175.7	At3g28840	822516	unknown protein	F:unknown;P:unknown;C:endomembrane system;BOMPFVA	O.I.	C.G.	H.G.
22.9	99.6	51.4	At3g03450	821251	RGL2 (RGA-LIKE 2)	Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.	O.I.	C.G.	H.G.
22.4	99.6	337.0	At3g15400	820779	ATA20	Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein.	O.I.	C.G.	H.G.
22.4	99.6	38.5	At1g75920	843925	family II extracellular lipase 5 (EXL5)	F:lipase activity, carboxylesterase activity, acyltransferase activity;P:sexual reproduction;C:extracellular region;PBFOM	O.I.	C.G.	H.G.
22.3	99.6	168.6	At5g24420	832513	glucosamine/galactosamine-6-phosphate isomerase-related	F:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFP	O.I.	C.G.	H.G.
22.3	99.6	57.8	At2g42990	818901	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
22.1	99.6	38.6	At3g60160	825186	ATMRP9	member of MRP subfamily	O.I.	C.G.	H.G.
21.8	99.6	38.2	At2g45600	819168	hydrolase	F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOPMFAV	O.I.	C.G.	H.G.
21.7	99.6	41.4	At5g07510	830644	GRP14	encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers.	O.I.	C.G.	H.G.
21.6	99.6	41.4	At4g14815	827138	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:anchored to membrane;P	O.I.	C.G.	H.G.
21.4	99.6	16.1	At1g23580	838968	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
21.3	99.6	42.4	At1g28430	839741	CYP705A24	member of CYP705A	O.I.	C.G.	H.G.
21.0	99.6	64.4	At4g37900	829946	glycine-rich protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;BMPOFVA	O.I.	C.G.	H.G.
20.6	99.6	146.6	At4g02290	828080	AtGH9B13 (Arabidopsis thaliana glycosyl hydrolase 9B13)	F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF	O.I.	C.G.	H.G.
20.3	99.6	17.1	At3g21920	821747	pollen coat receptor kinase, putative	F:molecular_function unknown;P:biological_process unknown;C:extracellular region;P	O.I.	C.G.	H.G.
20.3	99.6	10.0	At3g13662	820571	-	F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
20.2	99.6	10.9	At1g23690	838979	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
20.1	99.6	22.9	At1g60060	842300	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPFMB	O.I.	C.G.	H.G.
20.0	99.6	20.5	At3g04960	819656	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
19.9	99.6	21.3	At1g13150	837873	CYP86C4	member of CYP86C	O.I.	C.G.	H.G.
19.8	99.6	12.8	At1g26710	839212	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
19.6	99.6	12.3	At1g06990	837209	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
19.5	99.6	69.5	At2g38110	818389	GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)	Encodes a protein with glycerol-3-phosphate acyltransferase activity.	O.I.	C.G.	H.G.
19.4	99.6	16.7	At5g22980	832362	scpl47 (serine carboxypeptidase-like 47)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
19.0	99.5	220.5	At5g33370	833315	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
18.9	99.5	92.1	At5g23940	832459	EMB3009 (embryo defective 3009)	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PFBO	O.I.	C.G.	H.G.
18.7	99.5	118.7	At1g68875	843220	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
18.5	99.5	92.2	At5g44300	834453	dormancy/auxin associated family protein	F:molecular_function unknown;P:unknown;C:unknown;P	O.I.	C.G.	H.G.
18.4	99.5	127.4	At1g18280	838408	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:anchored to membrane;POBM	O.I.	C.G.	H.G.
18.2	99.5	77.6	At5g44620	834490	CYP706A3	member of CYP706A	O.I.	C.G.	H.G.
18.1	99.5	75.3	At5g08540	830754	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast, chloroplast envelope;PO	O.I.	C.G.	H.G.
18.1	99.5	27.7	At2g19070	816424	SHT (SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE)	encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091)	O.I.	C.G.	H.G.
18.1	99.5	15.6	At1g13130	837870	glycosyl hydrolase family 5 protein / cellulase family protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BPFO	O.I.	C.G.	H.G.
18.0	99.5	47.3	At1g24400	839057	LHT2 (LYSINE HISTIDINE TRANSPORTER 2)	High-affinity transporter for neutral and acidic amino acids, expressed in tapetum tissue of anthers	O.I.	C.G.	H.G.
17.7	99.5	115.4	At4g08670	826433	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:anchored to membrane;OPMBFV	O.I.	C.G.	H.G.
17.7	99.5	57.0	At2g03850	814911	late embryogenesis abundant domain-containing protein / LEA domain-containing protein	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;PBOMFA	O.I.	C.G.	H.G.
17.6	99.5	110.1	At3g28780	822510	unknown protein	F:molecular_function unknown;P:pollen exine formation;C:endomembrane system;BOMPFVA	O.I.	C.G.	H.G.
17.6	99.5	3.7	At1g23630		-	-	O.I.	C.G.	H.G.
17.3	99.5	41.5	At4g30500	829173	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
17.2	99.5	62.7	At1g22760	838882	PAB3 (POLY(A) BINDING PROTEIN 3)	Putative poly(A) binding protein May there fore function in posttranscriptional regulation, including mRNA turnover and translational initiation. Expression detected only in floral organs.	O.I.	C.G.	H.G.
17.0	99.5	164.3	At5g22430	832304	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
17.0	99.5	8.8	At1g23250	838934	calcium ion binding	F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.

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GSM ID	GSM131616
Assay name	ATGE_53_B
GSE experiment	GSE5632: AtGenExpress: Developmental series (flowers and pollen)

Microarray experiments to specifically-expressed genes

GSM ID GSM131616 Assay name ATGE_53_B GSE experiment GSE5632: AtGenExpress: Developmental series (flowers and pollen)

GSM ID GSM131616

Assay name ATGE_53_B

GSE experiment GSE5632: AtGenExpress: Developmental series (flowers and pollen)