CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM131598

Assay name ATGE_39_B

GSE experiment GSE5632: AtGenExpress: Developmental series (flowers and pollen)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
188.6 100.0 216.2 At1g61680 842465 TPS14 (TERPENE SYNTHASE 14) F:S-linalool synthase activity;P:monoterpene biosynthetic process;C:plastid;PO O.I. C.G. H.G.
167.5 100.0 191.8 At2g45580 819166 CYP76C3 member of CYP76C O.I. C.G. H.G.
139.0 99.9 143.2 At5g10770 830944 chloroplast nucleoid DNA-binding protein, putative F:DNA binding, aspartic-type endopeptidase activity;P:proteolysis;C:unknown;PMFOB O.I. C.G. H.G.
123.1 99.9 194.1 At2g24210 816955 TPS10 (terpene synthase 10) F:myrcene synthase activity, (E)-beta-ocimene synthase activity;P:response to jasmonic acid stimulus, monoterpenoid biosynthetic process, response to wounding;C:unknown;PO O.I. C.G. H.G.
117.1 99.9 96.7 At3g01530 821113 AtMYB57 (myb domain protein 57) Member of the R2R3 factor gene family. O.I. C.G. H.G.
112.2 99.9 256.8 At1g35310 840420 MLP168 (MLP-LIKE PROTEIN 168) F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
98.0 99.9 50.1 At4g39480 830103 CYP96A9 (CYTOCHROME P450 96 A9) member of CYP96A O.I. C.G. H.G.
90.8 99.9 92.1 At1g66120 842926 acyl-activating enzyme 11 (AAE11) F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
89.9 99.9 44.7 At5g23960 832461 TPS21 (TERPENE SYNTHASE 21) Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. O.I. C.G. H.G.
89.4 99.9 87.5 At1g23010 838909 LPR1 (Low Phosphate Root1) Encodes a protein with multicopper oxidase activity. O.I. C.G. H.G.
78.7 99.9 102.1 At3g14380 820659 integral membrane family protein F:unknown;P:unknown;C:membrane;P O.I. C.G. H.G.
75.8 99.9 112.5 At2g39060 818492 nodulin MtN3 family protein F:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMO O.I. C.G. H.G.
75.7 99.9 107.8 At3g55290 824695 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:peroxisome;BOMFPAV O.I. C.G. H.G.
74.1 99.9 42.7 At1g51440 841569 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:chloroplast;POFBMV O.I. C.G. H.G.
71.7 99.9 54.5 At1g22380 838845 AtUGT85A3 (UDP-glucosyl transferase 85A3) F:transferase activity, transferring glycosyl groups, transcription factor activity, glucuronosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMVBOF O.I. C.G. H.G.
70.3 99.9 65.2 At4g24000 828500 ATCSLG2 encodes a protein similar to cellulose synthase O.I. C.G. H.G.
69.9 99.9 112.1 At2g17880 816298 DNAJ heat shock protein, putative F:heat shock protein binding;P:protein folding;C:chloroplast;BOMFPAV O.I. C.G. H.G.
68.0 99.9 114.6 At3g01980 821069 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:peroxisome;BOFMPA O.I. C.G. H.G.
66.7 99.8 88.0 At3g27810 822401 ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21) Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development. O.I. C.G. H.G.
65.5 99.8 123.1 At3g53300 824497 CYP71B31 putative cytochrome P450 O.I. C.G. H.G.
65.1 99.8 58.8 At1g30795 839961 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOV O.I. C.G. H.G.
63.5 99.8 83.8 At1g54570 841899 esterase/lipase/thioesterase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:unknown;C:chloroplast, plastoglobule;BMPOF O.I. C.G. H.G.
59.1 99.8 57.4 At1g06520 837163 GPAT1 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1) Encodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels. O.I. C.G. H.G.
57.6 99.8 58.1 At1g70720 843409 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
56.4 99.8 69.0 At1g02470 837812 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOP O.I. C.G. H.G.
52.4 99.8 124.5 At5g66590 836791 allergen V5/Tpx-1-related family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFBO O.I. C.G. H.G.
47.9 99.8 53.7 At5g19880 832110 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to ethylene stimulus, response to oxidative stress, response to virus, N-terminal protein myristoylation;C:endomembrane system;PFOM O.I. C.G. H.G.
47.8 99.8 29.0 At3g55870 824753 anthranilate synthase, alpha subunit, putative F:oxo-acid-lyase activity, anthranilate synthase activity;P:tryptophan biosynthetic process, biosynthetic process;C:endomembrane system;BOFAPM O.I. C.G. H.G.
45.7 99.8 55.5 At3g60160 825186 ATMRP9 member of MRP subfamily O.I. C.G. H.G.
45.3 99.8 14.9 At4g18980 827634 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
43.7 99.8 28.6 At5g37170 833690 O-methyltransferase family 2 protein F:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOM O.I. C.G. H.G.
43.6 99.8 9.5 At3g45940 823737 alpha-xylosidase, putative F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:endomembrane system;BMFOPAV O.I. C.G. H.G.
42.6 99.8 76.9 At1g35170 840404 - F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MPOF O.I. C.G. H.G.
42.5 99.8 29.0 At3g10320 820194 transferase, transferring glycosyl groups F:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;PMOBF O.I. C.G. H.G.
42.4 99.8 102.4 At2g38110 818389 GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6) Encodes a protein with glycerol-3-phosphate acyltransferase activity. O.I. C.G. H.G.
41.7 99.8 44.8 At1g05450 837046 protease inhibitor/seed storage/lipid transfer protein (LTP)-related Encodes a Protease inhibitor/seed storage/LTP family protein O.I. C.G. H.G.
41.1 99.8 14.6 At2g17845 816294 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
39.7 99.8 388.8 At1g72260 843558 THI2.1 (THIONIN 2.1) Encodes a thionin which is a cysteine rich protein having antimicrobial properties. Thi2.1 is expressed in response to a variety of pathogens and induced by ethylene and jasmonic acid. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. O.I. C.G. H.G.
38.2 99.8 101.2 At1g78960 844236 ATLUP2 Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin. O.I. C.G. H.G.
37.0 99.7 23.0 At5g22980 832362 scpl47 (serine carboxypeptidase-like 47) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
36.9 99.7 79.4 At1g54020 841840 myrosinase-associated protein, putative F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBM O.I. C.G. H.G.
36.0 99.7 42.2 At1g35290 840418 thioesterase family protein F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:unknown;BOPA O.I. C.G. H.G.
35.9 99.7 163.0 At2g02850 814816 ARPN (PLANTACYANIN) Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil. O.I. C.G. H.G.
34.9 99.7 102.0 At5g44630 834491 terpene synthase/cyclase family protein Encodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries. O.I. C.G. H.G.
34.3 99.7 194.9 At5g45950 834635 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
34.2 99.7 56.0 At1g25330 839117 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMF O.I. C.G. H.G.
34.1 99.7 86.2 At2g34870 818052 MEE26 (maternal effect embryo arrest 26) F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:endomembrane system;MPOVFBA O.I. C.G. H.G.
33.7 99.7 40.0 At3g25810 822173 myrcene/ocimene synthase, putative F:in 7 functions;P:monoterpene biosynthetic process;C:plastid;PO O.I. C.G. H.G.
33.2 99.7 79.9 At4g24120 828512 YSL1 (YELLOW STRIPE LIKE 1) Member of a small family of oligopeptide transporters similar to the yellow stripe locus of maize (ZmYS1). O.I. C.G. H.G.
32.9 99.7 12.1 At1g75290 843866 oxidoreductase, acting on NADH or NADPH encodes a protein whose sequence is similar to an isoflavone reductase O.I. C.G. H.G.
31.8 99.7 98.1 At3g28007 822424 nodulin MtN3 family protein F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOB O.I. C.G. H.G.
31.2 99.7 40.4 At2g42900 818891 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
31.2 99.7 23.4 At1g65445 842856 transferase-related F:transferase activity, transferring acyl groups other than amino-acyl groups;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
30.5 99.7 16.8 At3g44250 823550 CYP71B38 putative cytochrome P450 O.I. C.G. H.G.
30.0 99.7 148.5 At1g21460 838744 nodulin MtN3 family protein F:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMO O.I. C.G. H.G.
29.7 99.7 45.4 At5g22860 832349 serine carboxypeptidase S28 family protein F:serine-type peptidase activity, peptidase activity;P:proteolysis;C:endomembrane system;MOFPB O.I. C.G. H.G.
29.6 99.7 93.3 At2g34810 818046 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to jasmonic acid stimulus, response to wounding;C:endomembrane system;FBPOAM O.I. C.G. H.G.
29.5 99.7 89.7 At3g21550 821709 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
28.7 99.7 67.2 At4g18425 827573 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
28.3 99.7 23.2 At1g66540 842972 cytochrome P450, putative F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:unknown;MPFBOAV O.I. C.G. H.G.
27.5 99.7 64.8 At1g65450 842857 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
27.5 99.7 16.7 At4g12530 826865 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
27.1 99.7 98.1 At1g35190 840408 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:alkaloid biosynthetic process;C:cellular_component unknown;POBFM O.I. C.G. H.G.
26.6 99.7 12.7 At1g09155 837435 AtPP2-B15 (Phloem protein 2-B15) F:carbohydrate binding;P:unknown;C:endomembrane system;P O.I. C.G. H.G.
26.4 99.7 33.5 At5g42680 834277 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
24.7 99.6 22.5 At1g29230 839797 CIPK18 (CBL-INTERACTING PROTEIN KINASE 18) Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.20), which has also been reported as a member of the CBL-interacting protein kinases (CIPK18). O.I. C.G. H.G.
23.8 99.6 63.0 At2g36190 818191 AtcwINV4 (Arabidopsis thaliana cell wall invertase 4) F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:endomembrane system;BPFOMA O.I. C.G. H.G.
23.6 99.6 22.0 At1g78950 844234 beta-amyrin synthase, putative F:beta-amyrin synthase activity;P:unknown;C:unknown;BPOFMA O.I. C.G. H.G.
23.4 99.6 40.2 At5g04200 830299 AtMC9 (metacaspase 9) F:cysteine-type peptidase activity;P:proteolysis;C:apoplast;FPBOA O.I. C.G. H.G.
23.1 99.6 57.6 At1g29510 839828 SAUR68 (SMALL AUXIN UPREGULATED 68) F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P O.I. C.G. H.G.
22.9 99.6 65.9 At4g16130 827299 ARA1 (ARABINOSE KINASE) Similar to galactokinase. O.I. C.G. H.G.
22.9 99.6 20.8 At5g24860 832555 FPF1 (FLOWERING PROMOTING FACTOR 1) encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice. O.I. C.G. H.G.
22.7 99.6 15.7 At5g38130 833793 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:unknown;C:unknown;PF O.I. C.G. H.G.
22.3 99.6 157.2 At5g24150 832480 SQP1 squalene monooxygenase gene homolog O.I. C.G. H.G.
22.2 99.6 112.6 At5g45890 834629 SAG12 (SENESCENCE-ASSOCIATED GENE 12) Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH. O.I. C.G. H.G.
22.1 99.6 145.5 At3g28050 822429 nodulin MtN21 family protein F:unknown;P:biological_process unknown;C:endomembrane system, membrane;PBOAFM O.I. C.G. H.G.
21.7 99.6 74.2 At3g14560 820682 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
21.4 99.6 50.2 At5g15800 831436 SEP1 (SEPALLATA1) Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3. O.I. C.G. H.G.
21.4 99.6 20.8 At1g07450 837257 tropinone reductase, putative / tropine dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
21.4 99.6 13.6 At1g20180 838607 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
21.1 99.6 29.5 At4g10310 826623 HKT1 (HIGH-AFFINITY K+ TRANSPORTER 1) encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots. O.I. C.G. H.G.
21.0 99.6 30.7 At1g23060 838914 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MPOBFV O.I. C.G. H.G.
20.9 99.6 177.6 At1g69870 843323 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:response to salt stress, oligopeptide transport;C:plasma membrane, membrane;PBMFO O.I. C.G. H.G.
20.5 99.6 16.1 At4g00870 827990 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
20.1 99.6 160.1 At5g24420 832513 glucosamine/galactosamine-6-phosphate isomerase-related F:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFP O.I. C.G. H.G.
20.0 99.6 35.4 At2g45560 819164 CYP76C1 cytochrome P450 monooxygenase O.I. C.G. H.G.
19.9 99.6 24.2 At2g28085 817353 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO O.I. C.G. H.G.
19.8 99.6 26.6 At4g00950 827948 MEE47 (maternal effect embryo arrest 47) F:transcription factor activity;P:embryonic development ending in seed dormancy, regulation of transcription;C:cellular_component unknown;PMFO O.I. C.G. H.G.
19.8 99.6 26.2 At1g27360 839625 squamosa promoter-binding protein-like 11 (SPL11) F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;P O.I. C.G. H.G.
19.7 99.6 42.8 At1g59640 842254 ZCW32 A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS. O.I. C.G. H.G.
19.5 99.6 59.1 At2g33480 817913 ANAC041 (Arabidopsis NAC domain containing protein 41) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOF O.I. C.G. H.G.
19.3 99.6 49.9 At4g09460 826530 ATMYB6 Encodes myb6 DNA-binding protein. O.I. C.G. H.G.
18.9 99.5 36.3 At5g17700 831637 MATE efflux family protein F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BPOFMA O.I. C.G. H.G.
18.5 99.5 135.2 At4g34590 829611 GBF6 (G-BOX BINDING FACTOR 6) Encodes a basic domain leucine zipper (bZip) transcription factor bZIP11. Translation is repressed by sucrose. Directly regulates gene expression of ASN1 and ProDH2, which are enzyme-coding genes involved in amino acid metabolism. O.I. C.G. H.G.
18.2 99.5 99.0 At1g69490 843282 NAP (NAC-like, activated by AP3/PI) Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence. O.I. C.G. H.G.
18.2 99.5 62.7 At4g15620 827239 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
18.1 99.5 17.0 At1g74300 843770 esterase/lipase/thioesterase family protein F:catalytic activity;P:biological_process unknown;C:endomembrane system;BPOFMA O.I. C.G. H.G.
17.9 99.5 66.8 At1g72290 843561 trypsin and protease inhibitor family protein / Kunitz family protein F:endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
17.9 99.5 10.2 At2g21655 816704 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
17.8 99.5 49.9 At1g30040 839883 ATGA2OX2 (GIBBERELLIN 2-OXIDASE) Encodes a gibberellin 2-oxidase. AtGA2OX2 expression is responsive to cytokinin and KNOX activities. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
188.6	100.0	216.2	At1g61680	842465	TPS14 (TERPENE SYNTHASE 14)	F:S-linalool synthase activity;P:monoterpene biosynthetic process;C:plastid;PO	O.I.	C.G.	H.G.
167.5	100.0	191.8	At2g45580	819166	CYP76C3	member of CYP76C	O.I.	C.G.	H.G.
139.0	99.9	143.2	At5g10770	830944	chloroplast nucleoid DNA-binding protein, putative	F:DNA binding, aspartic-type endopeptidase activity;P:proteolysis;C:unknown;PMFOB	O.I.	C.G.	H.G.
123.1	99.9	194.1	At2g24210	816955	TPS10 (terpene synthase 10)	F:myrcene synthase activity, (E)-beta-ocimene synthase activity;P:response to jasmonic acid stimulus, monoterpenoid biosynthetic process, response to wounding;C:unknown;PO	O.I.	C.G.	H.G.
117.1	99.9	96.7	At3g01530	821113	AtMYB57 (myb domain protein 57)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
112.2	99.9	256.8	At1g35310	840420	MLP168 (MLP-LIKE PROTEIN 168)	F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
98.0	99.9	50.1	At4g39480	830103	CYP96A9 (CYTOCHROME P450 96 A9)	member of CYP96A	O.I.	C.G.	H.G.
90.8	99.9	92.1	At1g66120	842926	acyl-activating enzyme 11 (AAE11)	F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
89.9	99.9	44.7	At5g23960	832461	TPS21 (TERPENE SYNTHASE 21)	Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma.	O.I.	C.G.	H.G.
89.4	99.9	87.5	At1g23010	838909	LPR1 (Low Phosphate Root1)	Encodes a protein with multicopper oxidase activity.	O.I.	C.G.	H.G.
78.7	99.9	102.1	At3g14380	820659	integral membrane family protein	F:unknown;P:unknown;C:membrane;P	O.I.	C.G.	H.G.
75.8	99.9	112.5	At2g39060	818492	nodulin MtN3 family protein	F:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMO	O.I.	C.G.	H.G.
75.7	99.9	107.8	At3g55290	824695	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:peroxisome;BOMFPAV	O.I.	C.G.	H.G.
74.1	99.9	42.7	At1g51440	841569	lipase class 3 family protein	F:triacylglycerol lipase activity;P:lipid metabolic process;C:chloroplast;POFBMV	O.I.	C.G.	H.G.
71.7	99.9	54.5	At1g22380	838845	AtUGT85A3 (UDP-glucosyl transferase 85A3)	F:transferase activity, transferring glycosyl groups, transcription factor activity, glucuronosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMVBOF	O.I.	C.G.	H.G.
70.3	99.9	65.2	At4g24000	828500	ATCSLG2	encodes a protein similar to cellulose synthase	O.I.	C.G.	H.G.
69.9	99.9	112.1	At2g17880	816298	DNAJ heat shock protein, putative	F:heat shock protein binding;P:protein folding;C:chloroplast;BOMFPAV	O.I.	C.G.	H.G.
68.0	99.9	114.6	At3g01980	821069	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:peroxisome;BOFMPA	O.I.	C.G.	H.G.
66.7	99.8	88.0	At3g27810	822401	ATMYB21 (ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 21)	Encodes a member of the R2R3-MYB transcription factor gene family. Induced by jasmonate. Involved in jasmonate response during stamen development.	O.I.	C.G.	H.G.
65.5	99.8	123.1	At3g53300	824497	CYP71B31	putative cytochrome P450	O.I.	C.G.	H.G.
65.1	99.8	58.8	At1g30795	839961	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOV	O.I.	C.G.	H.G.
63.5	99.8	83.8	At1g54570	841899	esterase/lipase/thioesterase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:unknown;C:chloroplast, plastoglobule;BMPOF	O.I.	C.G.	H.G.
59.1	99.8	57.4	At1g06520	837163	GPAT1 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1)	Encodes a membrane associated mitochondrial localized protein with glycerol-3-phosphate acyltransferase activity.Expressed in flower buds and siliques. Homozygous mutant plants are male sterile and have abnormal glycerolipid levels.	O.I.	C.G.	H.G.
57.6	99.8	58.1	At1g70720	843409	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
56.4	99.8	69.0	At1g02470	837812	-	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOP	O.I.	C.G.	H.G.
52.4	99.8	124.5	At5g66590	836791	allergen V5/Tpx-1-related family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFBO	O.I.	C.G.	H.G.
47.9	99.8	53.7	At5g19880	832110	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to ethylene stimulus, response to oxidative stress, response to virus, N-terminal protein myristoylation;C:endomembrane system;PFOM	O.I.	C.G.	H.G.
47.8	99.8	29.0	At3g55870	824753	anthranilate synthase, alpha subunit, putative	F:oxo-acid-lyase activity, anthranilate synthase activity;P:tryptophan biosynthetic process, biosynthetic process;C:endomembrane system;BOFAPM	O.I.	C.G.	H.G.
45.7	99.8	55.5	At3g60160	825186	ATMRP9	member of MRP subfamily	O.I.	C.G.	H.G.
45.3	99.8	14.9	At4g18980	827634	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
43.7	99.8	28.6	At5g37170	833690	O-methyltransferase family 2 protein	F:O-methyltransferase activity;P:lignin biosynthetic process;C:cytosol;PBFOM	O.I.	C.G.	H.G.
43.6	99.8	9.5	At3g45940	823737	alpha-xylosidase, putative	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:endomembrane system;BMFOPAV	O.I.	C.G.	H.G.
42.6	99.8	76.9	At1g35170	840404	-	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MPOF	O.I.	C.G.	H.G.
42.5	99.8	29.0	At3g10320	820194	transferase, transferring glycosyl groups	F:transferase activity, transferring glycosyl groups;P:biological_process unknown;C:cellular_component unknown;PMOBF	O.I.	C.G.	H.G.
42.4	99.8	102.4	At2g38110	818389	GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)	Encodes a protein with glycerol-3-phosphate acyltransferase activity.	O.I.	C.G.	H.G.
41.7	99.8	44.8	At1g05450	837046	protease inhibitor/seed storage/lipid transfer protein (LTP)-related	Encodes a Protease inhibitor/seed storage/LTP family protein	O.I.	C.G.	H.G.
41.1	99.8	14.6	At2g17845	816294	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
39.7	99.8	388.8	At1g72260	843558	THI2.1 (THIONIN 2.1)	Encodes a thionin which is a cysteine rich protein having antimicrobial properties. Thi2.1 is expressed in response to a variety of pathogens and induced by ethylene and jasmonic acid. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.	O.I.	C.G.	H.G.
38.2	99.8	101.2	At1g78960	844236	ATLUP2	Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.	O.I.	C.G.	H.G.
37.0	99.7	23.0	At5g22980	832362	scpl47 (serine carboxypeptidase-like 47)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
36.9	99.7	79.4	At1g54020	841840	myrosinase-associated protein, putative	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBM	O.I.	C.G.	H.G.
36.0	99.7	42.2	At1g35290	840418	thioesterase family protein	F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:unknown;BOPA	O.I.	C.G.	H.G.
35.9	99.7	163.0	At2g02850	814816	ARPN (PLANTACYANIN)	Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.	O.I.	C.G.	H.G.
34.9	99.7	102.0	At5g44630	834491	terpene synthase/cyclase family protein	Encodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries.	O.I.	C.G.	H.G.
34.3	99.7	194.9	At5g45950	834635	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
34.2	99.7	56.0	At1g25330	839117	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMF	O.I.	C.G.	H.G.
34.1	99.7	86.2	At2g34870	818052	MEE26 (maternal effect embryo arrest 26)	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:endomembrane system;MPOVFBA	O.I.	C.G.	H.G.
33.7	99.7	40.0	At3g25810	822173	myrcene/ocimene synthase, putative	F:in 7 functions;P:monoterpene biosynthetic process;C:plastid;PO	O.I.	C.G.	H.G.
33.2	99.7	79.9	At4g24120	828512	YSL1 (YELLOW STRIPE LIKE 1)	Member of a small family of oligopeptide transporters similar to the yellow stripe locus of maize (ZmYS1).	O.I.	C.G.	H.G.
32.9	99.7	12.1	At1g75290	843866	oxidoreductase, acting on NADH or NADPH	encodes a protein whose sequence is similar to an isoflavone reductase	O.I.	C.G.	H.G.
31.8	99.7	98.1	At3g28007	822424	nodulin MtN3 family protein	F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMOB	O.I.	C.G.	H.G.
31.2	99.7	40.4	At2g42900	818891	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
31.2	99.7	23.4	At1g65445	842856	transferase-related	F:transferase activity, transferring acyl groups other than amino-acyl groups;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
30.5	99.7	16.8	At3g44250	823550	CYP71B38	putative cytochrome P450	O.I.	C.G.	H.G.
30.0	99.7	148.5	At1g21460	838744	nodulin MtN3 family protein	F:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMO	O.I.	C.G.	H.G.
29.7	99.7	45.4	At5g22860	832349	serine carboxypeptidase S28 family protein	F:serine-type peptidase activity, peptidase activity;P:proteolysis;C:endomembrane system;MOFPB	O.I.	C.G.	H.G.
29.6	99.7	93.3	At2g34810	818046	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to jasmonic acid stimulus, response to wounding;C:endomembrane system;FBPOAM	O.I.	C.G.	H.G.
29.5	99.7	89.7	At3g21550	821709	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
28.7	99.7	67.2	At4g18425	827573	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
28.3	99.7	23.2	At1g66540	842972	cytochrome P450, putative	F:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:unknown;MPFBOAV	O.I.	C.G.	H.G.
27.5	99.7	64.8	At1g65450	842857	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
27.5	99.7	16.7	At4g12530	826865	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
27.1	99.7	98.1	At1g35190	840408	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity, iron ion binding;P:alkaloid biosynthetic process;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
26.6	99.7	12.7	At1g09155	837435	AtPP2-B15 (Phloem protein 2-B15)	F:carbohydrate binding;P:unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
26.4	99.7	33.5	At5g42680	834277	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
24.7	99.6	22.5	At1g29230	839797	CIPK18 (CBL-INTERACTING PROTEIN KINASE 18)	Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.20), which has also been reported as a member of the CBL-interacting protein kinases (CIPK18).	O.I.	C.G.	H.G.
23.8	99.6	63.0	At2g36190	818191	AtcwINV4 (Arabidopsis thaliana cell wall invertase 4)	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:endomembrane system;BPFOMA	O.I.	C.G.	H.G.
23.6	99.6	22.0	At1g78950	844234	beta-amyrin synthase, putative	F:beta-amyrin synthase activity;P:unknown;C:unknown;BPOFMA	O.I.	C.G.	H.G.
23.4	99.6	40.2	At5g04200	830299	AtMC9 (metacaspase 9)	F:cysteine-type peptidase activity;P:proteolysis;C:apoplast;FPBOA	O.I.	C.G.	H.G.
23.1	99.6	57.6	At1g29510	839828	SAUR68 (SMALL AUXIN UPREGULATED 68)	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P	O.I.	C.G.	H.G.
22.9	99.6	65.9	At4g16130	827299	ARA1 (ARABINOSE KINASE)	Similar to galactokinase.	O.I.	C.G.	H.G.
22.9	99.6	20.8	At5g24860	832555	FPF1 (FLOWERING PROMOTING FACTOR 1)	encodes a small protein of 12.6 kDa that regulates flowering and is involved in gibberellin signalling pathway. It is expressed in apical meristems immediately after the photoperiodic induction of flowering. Genetic interactions with flowering time and floral organ identity genes suggest that this gene may be involved in modulating the competence to flower. There are two other genes similar to FPF1, FLP1 (At4g31380) and FLP2 (no locus name yet, on BAC F8F16 on chr 4). This is so far a plant-specific gene and is only found in long-day mustard, arabidopsis, and rice.	O.I.	C.G.	H.G.
22.7	99.6	15.7	At5g38130	833793	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:unknown;C:unknown;PF	O.I.	C.G.	H.G.
22.3	99.6	157.2	At5g24150	832480	SQP1	squalene monooxygenase gene homolog	O.I.	C.G.	H.G.
22.2	99.6	112.6	At5g45890	834629	SAG12 (SENESCENCE-ASSOCIATED GENE 12)	Senescence-associated gene 12 (SAG12) encoding a cysteine protease influenced by cytokinin, auxin, and sugars.Localized to special vacuole found during senescence called senescence associated vacuoles which are different from central vacuole in the tonoplast composition and pH.	O.I.	C.G.	H.G.
22.1	99.6	145.5	At3g28050	822429	nodulin MtN21 family protein	F:unknown;P:biological_process unknown;C:endomembrane system, membrane;PBOAFM	O.I.	C.G.	H.G.
21.7	99.6	74.2	At3g14560	820682	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
21.4	99.6	50.2	At5g15800	831436	SEP1 (SEPALLATA1)	Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.	O.I.	C.G.	H.G.
21.4	99.6	20.8	At1g07450	837257	tropinone reductase, putative / tropine dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
21.4	99.6	13.6	At1g20180	838607	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
21.1	99.6	29.5	At4g10310	826623	HKT1 (HIGH-AFFINITY K+ TRANSPORTER 1)	encodes a sodium transporter (HKT1) expressed in xylem parenchyma cells. Mutants over-accumulate sodium in shoot tissue and have increased sodium in the xylem sap and reduced sodium in phloem sap and roots.	O.I.	C.G.	H.G.
21.0	99.6	30.7	At1g23060	838914	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MPOBFV	O.I.	C.G.	H.G.
20.9	99.6	177.6	At1g69870	843323	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:response to salt stress, oligopeptide transport;C:plasma membrane, membrane;PBMFO	O.I.	C.G.	H.G.
20.5	99.6	16.1	At4g00870	827990	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
20.1	99.6	160.1	At5g24420	832513	glucosamine/galactosamine-6-phosphate isomerase-related	F:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFP	O.I.	C.G.	H.G.
20.0	99.6	35.4	At2g45560	819164	CYP76C1	cytochrome P450 monooxygenase	O.I.	C.G.	H.G.
19.9	99.6	24.2	At2g28085	817353	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
19.8	99.6	26.6	At4g00950	827948	MEE47 (maternal effect embryo arrest 47)	F:transcription factor activity;P:embryonic development ending in seed dormancy, regulation of transcription;C:cellular_component unknown;PMFO	O.I.	C.G.	H.G.
19.8	99.6	26.2	At1g27360	839625	squamosa promoter-binding protein-like 11 (SPL11)	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;P	O.I.	C.G.	H.G.
19.7	99.6	42.8	At1g59640	842254	ZCW32	A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS.	O.I.	C.G.	H.G.
19.5	99.6	59.1	At2g33480	817913	ANAC041 (Arabidopsis NAC domain containing protein 41)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOF	O.I.	C.G.	H.G.
19.3	99.6	49.9	At4g09460	826530	ATMYB6	Encodes myb6 DNA-binding protein.	O.I.	C.G.	H.G.
18.9	99.5	36.3	At5g17700	831637	MATE efflux family protein	F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BPOFMA	O.I.	C.G.	H.G.
18.5	99.5	135.2	At4g34590	829611	GBF6 (G-BOX BINDING FACTOR 6)	Encodes a basic domain leucine zipper (bZip) transcription factor bZIP11. Translation is repressed by sucrose. Directly regulates gene expression of ASN1 and ProDH2, which are enzyme-coding genes involved in amino acid metabolism.	O.I.	C.G.	H.G.
18.2	99.5	99.0	At1g69490	843282	NAP (NAC-like, activated by AP3/PI)	Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.	O.I.	C.G.	H.G.
18.2	99.5	62.7	At4g15620	827239	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
18.1	99.5	17.0	At1g74300	843770	esterase/lipase/thioesterase family protein	F:catalytic activity;P:biological_process unknown;C:endomembrane system;BPOFMA	O.I.	C.G.	H.G.
17.9	99.5	66.8	At1g72290	843561	trypsin and protease inhibitor family protein / Kunitz family protein	F:endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
17.9	99.5	10.2	At2g21655	816704	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
17.8	99.5	49.9	At1g30040	839883	ATGA2OX2 (GIBBERELLIN 2-OXIDASE)	Encodes a gibberellin 2-oxidase. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.	O.I.	C.G.	H.G.

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GSM ID	GSM131598
Assay name	ATGE_39_B
GSE experiment	GSE5632: AtGenExpress: Developmental series (flowers and pollen)

Microarray experiments to specifically-expressed genes

GSM ID GSM131598 Assay name ATGE_39_B GSE experiment GSE5632: AtGenExpress: Developmental series (flowers and pollen)

GSM ID GSM131598

Assay name ATGE_39_B

GSE experiment GSE5632: AtGenExpress: Developmental series (flowers and pollen)