CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM131541

Assay name ATGE_26_B

GSE experiment GSE5630: AtGenExpress: Developmental series (leaves)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
72.7 99.9 83.9 At2g47880 819400 glutaredoxin family protein F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFBO O.I. C.G. H.G.
43.4 99.8 91.1 At5g60910 836212 AGL8 (agamous-like 8) MADS box gene negatively regulated by APETALA1 O.I. C.G. H.G.
40.9 99.8 104.4 At5g16570 831519 GLN1 Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium O.I. C.G. H.G.
40.3 99.8 148.7 At1g64360 842743 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;P O.I. C.G. H.G.
33.5 99.7 158.2 At5g06530 830541 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:plasma membrane;BOMFAPV O.I. C.G. H.G.
30.7 99.7 127.9 At1g35710 840475 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
30.3 99.7 44.3 At2g36970 818271 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMBVOF O.I. C.G. H.G.
27.9 99.7 117.5 At1g30250 839905 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
27.8 99.7 145.8 At3g03470 821250 CYP89A9 member of CYP89A O.I. C.G. H.G.
26.9 99.7 36.0 At1g31820 840072 amino acid permease family protein F:cationic amino acid transmembrane transporter activity;P:transport, amino acid transport;C:membrane;BFMOPA O.I. C.G. H.G.
26.3 99.7 52.1 At3g61210 825293 embryo-abundant protein-related F:unknown;P:unknown;C:cellular_component unknown;BPFOMA O.I. C.G. H.G.
26.1 99.7 70.8 At4g24120 828512 YSL1 (YELLOW STRIPE LIKE 1) Member of a small family of oligopeptide transporters similar to the yellow stripe locus of maize (ZmYS1). O.I. C.G. H.G.
25.8 99.7 83.1 At3g13062 820493 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO O.I. C.G. H.G.
24.0 99.6 49.0 At4g37560 829911 formamidase, putative / formamide amidohydrolase, putative F:formamidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides;P:metabolic process;C:cellular_component unknown;BOFAP O.I. C.G. H.G.
23.9 99.6 113.5 At1g69490 843282 NAP (NAC-like, activated by AP3/PI) Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence. O.I. C.G. H.G.
23.6 99.6 29.9 At1g11700 837714 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO O.I. C.G. H.G.
23.0 99.6 21.1 At3g15310 820762 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
22.0 99.6 116.4 At5g49630 835025 AAP6 (AMINO ACID PERMEASE 6) Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem. O.I. C.G. H.G.
21.8 99.6 59.1 At1g09240 837444 NAS3 (NICOTIANAMINE SYNTHASE 3) Encodes a nicotianamine synthase. O.I. C.G. H.G.
19.9 99.6 497.7 At4g32940 829431 GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME) Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death. O.I. C.G. H.G.
19.5 99.6 27.3 At1g29720 839850 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
19.5 99.6 15.3 At5g39090 833901 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFO O.I. C.G. H.G.
18.8 99.5 93.1 At5g63850 836505 AAP4 Amino acid transporter whose expression is downregulated by dehydration. O.I. C.G. H.G.
18.7 99.5 27.1 At5g62165 836337 AGL42 (AGAMOUS LIKE 42) Encodes a MADS box transcription factor. Expressed in quiescent center. O.I. C.G. H.G.
18.5 99.5 177.2 At4g00780 828009 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM O.I. C.G. H.G.
17.9 99.5 27.1 At3g28080 822432 nodulin MtN21 family protein F:molecular_function unknown;P:biological_process unknown;C:membrane;PBOAM O.I. C.G. H.G.
17.6 99.5 342.4 At5g49730 835036 ATFRO6 (FERRIC REDUCTION OXIDASE 6) Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner. O.I. C.G. H.G.
17.6 99.5 65.8 At1g78290 844164 - - O.I. C.G. H.G.
17.5 99.5 88.6 At2g32160 817775 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FMOP O.I. C.G. H.G.
17.4 99.5 200.1 At4g19170 827655 NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4) chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase O.I. C.G. H.G.
17.3 99.5 122.3 At5g23660 832431 MTN3 (Arabidopsis homolog of Medicago truncatula MTN3) homolog of the Medicago nodulin MTN3 O.I. C.G. H.G.
16.6 99.5 31.3 At5g59670 836088 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
16.5 99.5 113.8 At3g51860 824349 CAX3 (CATION EXCHANGER 3) F:cation:cation antiporter activity, calcium:cation antiporter activity, calcium:hydrogen antiporter activity;P:in 9 processes;C:plant-type vacuole membrane, vacuolar membrane, vacuole;BFOPAM O.I. C.G. H.G.
16.4 99.5 30.5 At1g79110 844252 protein binding / zinc ion binding F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOVF O.I. C.G. H.G.
16.2 99.5 107.1 At3g28270 822453 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMPOAFV O.I. C.G. H.G.
16.0 99.5 54.3 At3g62960 825471 glutaredoxin family protein F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFBO O.I. C.G. H.G.
15.8 99.5 66.3 At5g22300 832290 NIT4 (NITRILASE 4) encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway. O.I. C.G. H.G.
15.5 99.5 42.7 At3g03870 821099 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
15.2 99.4 158.1 At4g22570 828353 APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3) Encodes an adenine phosphoribosyltransferase (APT; EC 2.4.2.7), which is a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. APT3 has higher affinity for zeatin, isopentenyladenine and benzyladenine than APT1 but lower Vmax than APT1. O.I. C.G. H.G.
15.2 99.4 47.4 At4g04955 825836 ATALN (Arabidopsis allantoinase) Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allantoin, instead of ammonium nitrate, was supplied. O.I. C.G. H.G.
15.1 99.4 179.6 At5g10380 830902 RING1 Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators. O.I. C.G. H.G.
15.1 99.4 53.7 At5g11060 830973 KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4) A member of Class II KN1-like homeodomain transcription factors (together with KNAT3 and KNAT5), with greatest homology to the maize knox1 homeobox protein. Expression regulated by light. Detected in all tissues examined, but most prominent in leaves and young siliques. Transient expression of GFP translational fusion protein suggests bipartite localization in nucleus and cytoplasm. KNAT4 promoter activity showed cell-type specific pattern along longitudinal root axis; GUS expression pattern started at the elongation zone, predominantly in the phloem and pericycle cells, extending to endodermis toward the base of the root. O.I. C.G. H.G.
15.0 99.4 45.7 At1g64500 842758 glutaredoxin family protein F:electron carrier activity, protein disulfide oxidoreductase activity;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;PMBOF O.I. C.G. H.G.
14.9 99.4 68.0 At2g17040 816209 anac036 (Arabidopsis NAC domain containing protein 36) F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;P O.I. C.G. H.G.
14.6 99.4 102.6 At3g45860 823729 receptor-like protein kinase, putative F:kinase activity;P:defense response;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
14.4 99.4 92.6 At1g22930 838900 T-complex protein 11 F:unknown;P:biological_process unknown;C:unknown;MOBFPAV O.I. C.G. H.G.
13.9 99.4 230.4 At1g52870 841720 peroxisomal membrane protein-related F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast;MPFO O.I. C.G. H.G.
13.4 99.4 24.4 At4g13900 3770199 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
13.3 99.4 72.9 At5g15850 831442 COL1 (constans-like 1) Homologous to the flowering-time gene CONSTANS. O.I. C.G. H.G.
13.1 99.4 205.7 At1g67870 843115 glycine-rich protein F:unknown;P:biological_process unknown;C:unknown;MOBPFAV O.I. C.G. H.G.
13.1 99.4 127.1 At1g68520 843181 zinc finger (B-box type) family protein F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POMF O.I. C.G. H.G.
13.1 99.4 81.1 At3g10420 820206 sporulation protein-related F:nucleoside-triphosphatase activity, nucleotide binding;P:unknown;C:chloroplast;BOPAMF O.I. C.G. H.G.
12.8 99.3 79.6 At3g04210 819576 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PBMO O.I. C.G. H.G.
12.8 99.3 29.4 At1g80760 844415 NIP6 Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously. O.I. C.G. H.G.
12.8 99.3 25.1 At4g24450 828547 PWD (PHOSPHOGLUCAN, WATER DIKINASE) F:kinase activity, ATP binding;P:phosphorylation;C:chloroplast envelope;BAPOF O.I. C.G. H.G.
12.8 99.3 10.0 At4g29050 829026 lectin protein kinase family protein F:carbohydrate binding, kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
12.6 99.3 9.3 At1g76530 843986 auxin efflux carrier family protein F:auxin:hydrogen symporter activity;P:auxin polar transport;C:endomembrane system, integral to membrane;PFO O.I. C.G. H.G.
12.5 99.3 24.3 At5g58120 835924 disease resistance protein (TIR-NBS-LRR class), putative F:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFA O.I. C.G. H.G.
12.2 99.3 39.7 At1g34040 840301 alliinase family protein F:pyridoxal phosphate binding, carbon-sulfur lyase activity, catalytic activity;P:biological_process unknown;C:endomembrane system;PBOAF O.I. C.G. H.G.
12.0 99.3 98.9 At4g19420 827683 pectinacetylesterase family protein F:carboxylesterase activity;P:biological_process unknown;C:endomembrane system;PMOBA O.I. C.G. H.G.
12.0 99.3 79.6 At4g12280 826837 copper amine oxidase family protein F:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:cellular_component unknown;FBMOPA O.I. C.G. H.G.
11.9 99.3 160.3 At1g21000 838694 zinc-binding family protein F:binding;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
11.9 99.3 39.1 At1g63880 842692 disease resistance protein (TIR-NBS-LRR class), putative Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans. O.I. C.G. H.G.
11.7 99.3 37.6 At1g65480 842859 FT (FLOWERING LOCUS T) FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1. O.I. C.G. H.G.
11.6 99.3 103.2 At4g17840 827507 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFPBV O.I. C.G. H.G.
11.5 99.3 36.7 At3g21750 821729 UGT71B1 (UDP-GLUCOSYL TRANSFERASE 71B1) F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF O.I. C.G. H.G.
11.4 99.3 194.7 At5g45350 834571 proline-rich family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBFOVA O.I. C.G. H.G.
11.4 99.3 104.0 At3g44880 823622 ACD1 (ACCELERATED CELL DEATH 1) Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene. O.I. C.G. H.G.
11.4 99.3 51.6 At4g00050 828175 UNE10 (unfertilized embryo sac 10) F:transcription factor activity, DNA binding;P:double fertilization forming a zygote and endosperm, regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
11.4 99.3 10.5 At1g19510 838537 ATRL5 (ARABIDOPSIS RAD-LIKE 5) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:unknown;PMO O.I. C.G. H.G.
11.2 99.2 17.7 At2g03710 814898 SEP4 (SEPALLATA 4) This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity. O.I. C.G. H.G.
11.1 99.2 165.4 At4g19840 827728 ATPP2-A1 encodes a protein similar to phloem lectin in cucumber and celery. Gene is expressed in the phloem, predominantly in the companion cells. O.I. C.G. H.G.
11.1 99.2 30.2 At1g15410 838111 aspartate-glutamate racemase family F:racemase and epimerase activity, acting on amino acids and derivatives;P:amino acid metabolic process, metabolic process;C:chloroplast;BOAPF O.I. C.G. H.G.
11.0 99.2 60.8 At5g13800 831225 hydrolase, alpha/beta fold family protein F:hydrolase activity, pheophytinase activity;P:chlorophyll catabolic process;C:chloroplast;BOPMAF O.I. C.G. H.G.
10.9 99.2 85.6 At2g35940 818167 BLH1 (BEL1-LIKE HOMEODOMAIN 1) Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm. O.I. C.G. H.G.
10.6 99.2 67.2 At5g18130 831931 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
10.5 99.2 69.2 At4g28400 828957 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:unknown;C:cellular_component unknown;PMOBFVA O.I. C.G. H.G.
10.5 99.2 66.6 At3g11670 820339 DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1) Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE). O.I. C.G. H.G.
10.5 99.2 17.2 At3g13810 820593 AtIDD11 (Arabidopsis thaliana Indeterminate(ID)-Domain 11) F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MOPFB O.I. C.G. H.G.
10.4 99.2 136.7 At1g22710 838877 SUC2 (SUCROSE-PROTON SYMPORTER 2) Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both α- or β-linkage. O.I. C.G. H.G.
10.4 99.2 43.7 At3g27110 822330 peptidase M48 family protein F:metalloendopeptidase activity;P:proteolysis;C:chloroplast, membrane;BOAPF O.I. C.G. H.G.
10.3 99.2 43.6 At2g46450 819253 ATCNGC12 Member of Cyclic nucleotide gated channel family.Positive regulator of resistance against avirulent fungal pathogen.Suppresses the phenotype conferred by cpr22 in a dosage-dependent manner. O.I. C.G. H.G.
10.3 99.2 42.9 At2g33480 817913 ANAC041 (Arabidopsis NAC domain containing protein 41) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOF O.I. C.G. H.G.
10.3 99.2 36.9 At3g44630 823589 disease resistance protein RPP1-WsB-like (TIR-NBS-LRR class), putative F:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:N-terminal protein myristoylation, defense response;C:intrinsic to membrane;PMBOFAV O.I. C.G. H.G.
10.3 99.2 18.7 At2g24160 3768109 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
10.2 99.2 93.3 At2g18230 816338 AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2) Encodes a protein that might have inorganic pyrophosphatase activity. O.I. C.G. H.G.
10.2 99.2 77.8 At1g07440 837256 tropinone reductase, putative / tropine dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
10.2 99.2 77.0 At4g23140 828413 CRK6 (CYSTEINE-RICH RLK 6) Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) O.I. C.G. H.G.
10.1 99.2 97.4 At5g53370 835418 PMEPCRF (PECTIN METHYLESTERASE PCR FRAGMENT F) F:pectinesterase activity;P:cell wall modification;C:cell wall;PBFMO O.I. C.G. H.G.
10.1 99.2 58.7 At3g51895 824353 SULTR3 Encodes a sulfate transporter. O.I. C.G. H.G.
10.1 99.2 21.1 At3g49160 824077 pyruvate kinase family protein Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. O.I. C.G. H.G.
10.0 99.2 145.0 At4g14400 827085 ACD6 (ACCELERATED CELL DEATH 6) encodes a novel protein with putative ankyrin and transmembrane regions. It is a member of one of the largest uncharacterized gene families in higher plants. The gene is involved in resistance to Pseudomonas syringae. O.I. C.G. H.G.
9.9 99.1 37.9 At1g58848 842226 ATP binding / protein binding F:protein binding, ATP binding;P:defense response, apoptosis;C:unknown;PBMOFA O.I. C.G. H.G.
9.8 99.1 331.0 At1g23130 838921 Bet v I allergen family protein F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
9.8 99.1 196.5 At3g25690 822157 CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) actin binding protein required for normal chloroplast positioning O.I. C.G. H.G.
9.7 99.1 45.0 At4g08920 826470 CRY1 (CRYPTOCHROME 1) Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings. O.I. C.G. H.G.
9.6 99.1 120.8 At1g55850 842035 ATCSLE1 encodes a protein similar to cellulose synthase O.I. C.G. H.G.
9.6 99.1 107.6 At3g27925 822416 DEGP1 (DegP protease 1) Encodes a DegP protease; nuclear gene encoding chloroplast-targeted protease that can degrade two lumenal proteins, plastocyanin and OE33, suggesting a role as a general-purpose protease in the thylakoid lumen. Involved in the degradation of D1 protein of PS II, hence participating in the repair of PS II damages caused by photoinhibition. O.I. C.G. H.G.
9.5 99.1 72.7 At2g15580 816051 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFBV O.I. C.G. H.G.
9.5 99.1 25.0 At4g02420 828035 lectin protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
72.7	99.9	83.9	At2g47880	819400	glutaredoxin family protein	F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFBO	O.I.	C.G.	H.G.
43.4	99.8	91.1	At5g60910	836212	AGL8 (agamous-like 8)	MADS box gene negatively regulated by APETALA1	O.I.	C.G.	H.G.
40.9	99.8	104.4	At5g16570	831519	GLN1	Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium	O.I.	C.G.	H.G.
40.3	99.8	148.7	At1g64360	842743	unknown protein	F:molecular_function unknown;P:response to oxidative stress;C:cellular_component unknown;P	O.I.	C.G.	H.G.
33.5	99.7	158.2	At5g06530	830541	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:plasma membrane;BOMFAPV	O.I.	C.G.	H.G.
30.7	99.7	127.9	At1g35710	840475	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
30.3	99.7	44.3	At2g36970	818271	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:endomembrane system;PMBVOF	O.I.	C.G.	H.G.
27.9	99.7	117.5	At1g30250	839905	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
27.8	99.7	145.8	At3g03470	821250	CYP89A9	member of CYP89A	O.I.	C.G.	H.G.
26.9	99.7	36.0	At1g31820	840072	amino acid permease family protein	F:cationic amino acid transmembrane transporter activity;P:transport, amino acid transport;C:membrane;BFMOPA	O.I.	C.G.	H.G.
26.3	99.7	52.1	At3g61210	825293	embryo-abundant protein-related	F:unknown;P:unknown;C:cellular_component unknown;BPFOMA	O.I.	C.G.	H.G.
26.1	99.7	70.8	At4g24120	828512	YSL1 (YELLOW STRIPE LIKE 1)	Member of a small family of oligopeptide transporters similar to the yellow stripe locus of maize (ZmYS1).	O.I.	C.G.	H.G.
25.8	99.7	83.1	At3g13062	820493	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO	O.I.	C.G.	H.G.
24.0	99.6	49.0	At4g37560	829911	formamidase, putative / formamide amidohydrolase, putative	F:formamidase activity, hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides;P:metabolic process;C:cellular_component unknown;BOFAP	O.I.	C.G.	H.G.
23.9	99.6	113.5	At1g69490	843282	NAP (NAC-like, activated by AP3/PI)	Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence.	O.I.	C.G.	H.G.
23.6	99.6	29.9	At1g11700	837714	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO	O.I.	C.G.	H.G.
23.0	99.6	21.1	At3g15310	820762	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
22.0	99.6	116.4	At5g49630	835025	AAP6 (AMINO ACID PERMEASE 6)	Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.	O.I.	C.G.	H.G.
21.8	99.6	59.1	At1g09240	837444	NAS3 (NICOTIANAMINE SYNTHASE 3)	Encodes a nicotianamine synthase.	O.I.	C.G.	H.G.
19.9	99.6	497.7	At4g32940	829431	GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME)	Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.	O.I.	C.G.	H.G.
19.5	99.6	27.3	At1g29720	839850	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
19.5	99.6	15.3	At5g39090	833901	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:unknown;PFO	O.I.	C.G.	H.G.
18.8	99.5	93.1	At5g63850	836505	AAP4	Amino acid transporter whose expression is downregulated by dehydration.	O.I.	C.G.	H.G.
18.7	99.5	27.1	At5g62165	836337	AGL42 (AGAMOUS LIKE 42)	Encodes a MADS box transcription factor. Expressed in quiescent center.	O.I.	C.G.	H.G.
18.5	99.5	177.2	At4g00780	828009	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
17.9	99.5	27.1	At3g28080	822432	nodulin MtN21 family protein	F:molecular_function unknown;P:biological_process unknown;C:membrane;PBOAM	O.I.	C.G.	H.G.
17.6	99.5	342.4	At5g49730	835036	ATFRO6 (FERRIC REDUCTION OXIDASE 6)	Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.	O.I.	C.G.	H.G.
17.6	99.5	65.8	At1g78290	844164	-	-	O.I.	C.G.	H.G.
17.5	99.5	88.6	At2g32160	817775	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FMOP	O.I.	C.G.	H.G.
17.4	99.5	200.1	At4g19170	827655	NCED4 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4)	chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase	O.I.	C.G.	H.G.
17.3	99.5	122.3	At5g23660	832431	MTN3 (Arabidopsis homolog of Medicago truncatula MTN3)	homolog of the Medicago nodulin MTN3	O.I.	C.G.	H.G.
16.6	99.5	31.3	At5g59670	836088	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
16.5	99.5	113.8	At3g51860	824349	CAX3 (CATION EXCHANGER 3)	F:cation:cation antiporter activity, calcium:cation antiporter activity, calcium:hydrogen antiporter activity;P:in 9 processes;C:plant-type vacuole membrane, vacuolar membrane, vacuole;BFOPAM	O.I.	C.G.	H.G.
16.4	99.5	30.5	At1g79110	844252	protein binding / zinc ion binding	F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOVF	O.I.	C.G.	H.G.
16.2	99.5	107.1	At3g28270	822453	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMPOAFV	O.I.	C.G.	H.G.
16.0	99.5	54.3	At3g62960	825471	glutaredoxin family protein	F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFBO	O.I.	C.G.	H.G.
15.8	99.5	66.3	At5g22300	832290	NIT4 (NITRILASE 4)	encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.	O.I.	C.G.	H.G.
15.5	99.5	42.7	At3g03870	821099	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
15.2	99.4	158.1	At4g22570	828353	APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)	Encodes an adenine phosphoribosyltransferase (APT; EC 2.4.2.7), which is a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. APT3 has higher affinity for zeatin, isopentenyladenine and benzyladenine than APT1 but lower Vmax than APT1.	O.I.	C.G.	H.G.
15.2	99.4	47.4	At4g04955	825836	ATALN (Arabidopsis allantoinase)	Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allantoin, instead of ammonium nitrate, was supplied.	O.I.	C.G.	H.G.
15.1	99.4	179.6	At5g10380	830902	RING1	Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators.	O.I.	C.G.	H.G.
15.1	99.4	53.7	At5g11060	830973	KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4)	A member of Class II KN1-like homeodomain transcription factors (together with KNAT3 and KNAT5), with greatest homology to the maize knox1 homeobox protein. Expression regulated by light. Detected in all tissues examined, but most prominent in leaves and young siliques. Transient expression of GFP translational fusion protein suggests bipartite localization in nucleus and cytoplasm. KNAT4 promoter activity showed cell-type specific pattern along longitudinal root axis; GUS expression pattern started at the elongation zone, predominantly in the phloem and pericycle cells, extending to endodermis toward the base of the root.	O.I.	C.G.	H.G.
15.0	99.4	45.7	At1g64500	842758	glutaredoxin family protein	F:electron carrier activity, protein disulfide oxidoreductase activity;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;PMBOF	O.I.	C.G.	H.G.
14.9	99.4	68.0	At2g17040	816209	anac036 (Arabidopsis NAC domain containing protein 36)	F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;P	O.I.	C.G.	H.G.
14.6	99.4	102.6	At3g45860	823729	receptor-like protein kinase, putative	F:kinase activity;P:defense response;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
14.4	99.4	92.6	At1g22930	838900	T-complex protein 11	F:unknown;P:biological_process unknown;C:unknown;MOBFPAV	O.I.	C.G.	H.G.
13.9	99.4	230.4	At1g52870	841720	peroxisomal membrane protein-related	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, chloroplast;MPFO	O.I.	C.G.	H.G.
13.4	99.4	24.4	At4g13900	3770199	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
13.3	99.4	72.9	At5g15850	831442	COL1 (constans-like 1)	Homologous to the flowering-time gene CONSTANS.	O.I.	C.G.	H.G.
13.1	99.4	205.7	At1g67870	843115	glycine-rich protein	F:unknown;P:biological_process unknown;C:unknown;MOBPFAV	O.I.	C.G.	H.G.
13.1	99.4	127.1	At1g68520	843181	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POMF	O.I.	C.G.	H.G.
13.1	99.4	81.1	At3g10420	820206	sporulation protein-related	F:nucleoside-triphosphatase activity, nucleotide binding;P:unknown;C:chloroplast;BOPAMF	O.I.	C.G.	H.G.
12.8	99.3	79.6	At3g04210	819576	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PBMO	O.I.	C.G.	H.G.
12.8	99.3	29.4	At1g80760	844415	NIP6	Encodes a protein with boron transporter activity. It helps to preferentially direct boron to young developing tissues in the shoot, such as immature leaves, under low boron conditions. This boron channel appears to be impermeable to water, unlike the closely related NIP5;1 boron transporter. This protein also allows the transport of glycerol, urea, and formimide but not larger uncharged solutes such as arabitol and sucrose when it is expressed heterologously.	O.I.	C.G.	H.G.
12.8	99.3	25.1	At4g24450	828547	PWD (PHOSPHOGLUCAN, WATER DIKINASE)	F:kinase activity, ATP binding;P:phosphorylation;C:chloroplast envelope;BAPOF	O.I.	C.G.	H.G.
12.8	99.3	10.0	At4g29050	829026	lectin protein kinase family protein	F:carbohydrate binding, kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
12.6	99.3	9.3	At1g76530	843986	auxin efflux carrier family protein	F:auxin:hydrogen symporter activity;P:auxin polar transport;C:endomembrane system, integral to membrane;PFO	O.I.	C.G.	H.G.
12.5	99.3	24.3	At5g58120	835924	disease resistance protein (TIR-NBS-LRR class), putative	F:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFA	O.I.	C.G.	H.G.
12.2	99.3	39.7	At1g34040	840301	alliinase family protein	F:pyridoxal phosphate binding, carbon-sulfur lyase activity, catalytic activity;P:biological_process unknown;C:endomembrane system;PBOAF	O.I.	C.G.	H.G.
12.0	99.3	98.9	At4g19420	827683	pectinacetylesterase family protein	F:carboxylesterase activity;P:biological_process unknown;C:endomembrane system;PMOBA	O.I.	C.G.	H.G.
12.0	99.3	79.6	At4g12280	826837	copper amine oxidase family protein	F:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:cellular_component unknown;FBMOPA	O.I.	C.G.	H.G.
11.9	99.3	160.3	At1g21000	838694	zinc-binding family protein	F:binding;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
11.9	99.3	39.1	At1g63880	842692	disease resistance protein (TIR-NBS-LRR class), putative	Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.	O.I.	C.G.	H.G.
11.7	99.3	37.6	At1g65480	842859	FT (FLOWERING LOCUS T)	FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1.	O.I.	C.G.	H.G.
11.6	99.3	103.2	At4g17840	827507	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMFPBV	O.I.	C.G.	H.G.
11.5	99.3	36.7	At3g21750	821729	UGT71B1 (UDP-GLUCOSYL TRANSFERASE 71B1)	F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOVF	O.I.	C.G.	H.G.
11.4	99.3	194.7	At5g45350	834571	proline-rich family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBFOVA	O.I.	C.G.	H.G.
11.4	99.3	104.0	At3g44880	823622	ACD1 (ACCELERATED CELL DEATH 1)	Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene.	O.I.	C.G.	H.G.
11.4	99.3	51.6	At4g00050	828175	UNE10 (unfertilized embryo sac 10)	F:transcription factor activity, DNA binding;P:double fertilization forming a zygote and endosperm, regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
11.4	99.3	10.5	At1g19510	838537	ATRL5 (ARABIDOPSIS RAD-LIKE 5)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:unknown;PMO	O.I.	C.G.	H.G.
11.2	99.2	17.7	At2g03710	814898	SEP4 (SEPALLATA 4)	This gene belongs to the family of SEP genes. It is involved in the development of sepals, petals, stamens and carpels. Additionally, it plays a central role in the determination of flower meristem and organ identity.	O.I.	C.G.	H.G.
11.1	99.2	165.4	At4g19840	827728	ATPP2-A1	encodes a protein similar to phloem lectin in cucumber and celery. Gene is expressed in the phloem, predominantly in the companion cells.	O.I.	C.G.	H.G.
11.1	99.2	30.2	At1g15410	838111	aspartate-glutamate racemase family	F:racemase and epimerase activity, acting on amino acids and derivatives;P:amino acid metabolic process, metabolic process;C:chloroplast;BOAPF	O.I.	C.G.	H.G.
11.0	99.2	60.8	At5g13800	831225	hydrolase, alpha/beta fold family protein	F:hydrolase activity, pheophytinase activity;P:chlorophyll catabolic process;C:chloroplast;BOPMAF	O.I.	C.G.	H.G.
10.9	99.2	85.6	At2g35940	818167	BLH1 (BEL1-LIKE HOMEODOMAIN 1)	Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.	O.I.	C.G.	H.G.
10.6	99.2	67.2	At5g18130	831931	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
10.5	99.2	69.2	At4g28400	828957	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:unknown;C:cellular_component unknown;PMOBFVA	O.I.	C.G.	H.G.
10.5	99.2	66.6	At3g11670	820339	DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1)	Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE).	O.I.	C.G.	H.G.
10.5	99.2	17.2	At3g13810	820593	AtIDD11 (Arabidopsis thaliana Indeterminate(ID)-Domain 11)	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MOPFB	O.I.	C.G.	H.G.
10.4	99.2	136.7	At1g22710	838877	SUC2 (SUCROSE-PROTON SYMPORTER 2)	Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both α- or β-linkage.	O.I.	C.G.	H.G.
10.4	99.2	43.7	At3g27110	822330	peptidase M48 family protein	F:metalloendopeptidase activity;P:proteolysis;C:chloroplast, membrane;BOAPF	O.I.	C.G.	H.G.
10.3	99.2	43.6	At2g46450	819253	ATCNGC12	Member of Cyclic nucleotide gated channel family.Positive regulator of resistance against avirulent fungal pathogen.Suppresses the phenotype conferred by cpr22 in a dosage-dependent manner.	O.I.	C.G.	H.G.
10.3	99.2	42.9	At2g33480	817913	ANAC041 (Arabidopsis NAC domain containing protein 41)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOF	O.I.	C.G.	H.G.
10.3	99.2	36.9	At3g44630	823589	disease resistance protein RPP1-WsB-like (TIR-NBS-LRR class), putative	F:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:N-terminal protein myristoylation, defense response;C:intrinsic to membrane;PMBOFAV	O.I.	C.G.	H.G.
10.3	99.2	18.7	At2g24160	3768109	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
10.2	99.2	93.3	At2g18230	816338	AtPPa2 (Arabidopsis thaliana pyrophosphorylase 2)	Encodes a protein that might have inorganic pyrophosphatase activity.	O.I.	C.G.	H.G.
10.2	99.2	77.8	At1g07440	837256	tropinone reductase, putative / tropine dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
10.2	99.2	77.0	At4g23140	828413	CRK6 (CYSTEINE-RICH RLK 6)	Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)	O.I.	C.G.	H.G.
10.1	99.2	97.4	At5g53370	835418	PMEPCRF (PECTIN METHYLESTERASE PCR FRAGMENT F)	F:pectinesterase activity;P:cell wall modification;C:cell wall;PBFMO	O.I.	C.G.	H.G.
10.1	99.2	58.7	At3g51895	824353	SULTR3	Encodes a sulfate transporter.	O.I.	C.G.	H.G.
10.1	99.2	21.1	At3g49160	824077	pyruvate kinase family protein	Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.	O.I.	C.G.	H.G.
10.0	99.2	145.0	At4g14400	827085	ACD6 (ACCELERATED CELL DEATH 6)	encodes a novel protein with putative ankyrin and transmembrane regions. It is a member of one of the largest uncharacterized gene families in higher plants. The gene is involved in resistance to Pseudomonas syringae.	O.I.	C.G.	H.G.
9.9	99.1	37.9	At1g58848	842226	ATP binding / protein binding	F:protein binding, ATP binding;P:defense response, apoptosis;C:unknown;PBMOFA	O.I.	C.G.	H.G.
9.8	99.1	331.0	At1g23130	838921	Bet v I allergen family protein	F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
9.8	99.1	196.5	At3g25690	822157	CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1)	actin binding protein required for normal chloroplast positioning	O.I.	C.G.	H.G.
9.7	99.1	45.0	At4g08920	826470	CRY1 (CRYPTOCHROME 1)	Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings.	O.I.	C.G.	H.G.
9.6	99.1	120.8	At1g55850	842035	ATCSLE1	encodes a protein similar to cellulose synthase	O.I.	C.G.	H.G.
9.6	99.1	107.6	At3g27925	822416	DEGP1 (DegP protease 1)	Encodes a DegP protease; nuclear gene encoding chloroplast-targeted protease that can degrade two lumenal proteins, plastocyanin and OE33, suggesting a role as a general-purpose protease in the thylakoid lumen. Involved in the degradation of D1 protein of PS II, hence participating in the repair of PS II damages caused by photoinhibition.	O.I.	C.G.	H.G.
9.5	99.1	72.7	At2g15580	816051	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFBV	O.I.	C.G.	H.G.
9.5	99.1	25.0	At4g02420	828035	lectin protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.

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GSM ID	GSM131541
Assay name	ATGE_26_B
GSE experiment	GSE5630: AtGenExpress: Developmental series (leaves)

Microarray experiments to specifically-expressed genes

GSM ID GSM131541 Assay name ATGE_26_B GSE experiment GSE5630: AtGenExpress: Developmental series (leaves)

GSM ID GSM131541

Assay name ATGE_26_B

GSE experiment GSE5630: AtGenExpress: Developmental series (leaves)