Microarray experiments to specifically-expressed genes

GSM ID GSM131468
Assay name AtGen_6-9612_Heatstress(3h)+21hrecovery-Shoots-24.0h_Rep2
GSE experiment GSE5628: AtGenExpress: Stress Treatments (Heat stress)

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
47.399.865.5At2g27420817287cysteine proteinase, putativeF:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis;C:endomembrane system;MOPBVAFO.I.C.G.H.G.
30.999.7178.9At1g55960842047-F:molecular_function unknown;P:biological_process unknown;C:unknown;MPOO.I.C.G.H.G.
29.099.778.1At3g52720824438ACA1 (ALPHA CARBONIC ANHYDRASE 1)F:carbonate dehydratase activity, zinc ion binding;P:one-carbon compound metabolic process;C:endomembrane system;MBPOFO.I.C.G.H.G.
25.799.737.8At1g73870843723zinc finger (B-box type) family proteinF:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;POO.I.C.G.H.G.
22.299.633.7At2g15020815991unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
21.799.699.9At1g07180837229NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1)Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.O.I.C.G.H.G.
21.499.6116.2At3g02380821298COL2 (constans-like 2)homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteinsO.I.C.G.H.G.
19.899.6148.1At5g24150832480SQP1squalene monooxygenase gene homologO.I.C.G.H.G.
16.799.547.9At4g12830826895hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:chloroplast;BOMPFAO.I.C.G.H.G.
15.899.533.7At4g09350826517DNAJ heat shock N-terminal domain-containing proteinF:heat shock protein binding;P:protein folding;C:chloroplast;BOMFPAVO.I.C.G.H.G.
15.499.595.4At4g10120826603ATSPS4FEncodes a protein with putative sucrose-phosphate synthase activity.O.I.C.G.H.G.
14.799.436.2At5g02830831772pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:chloroplast;POMFBAO.I.C.G.H.G.
14.499.434.7At5g56850835787unknown proteinF:unknown;P:unknown;C:unknown;OMBFPAVO.I.C.G.H.G.
13.899.438.9At5g42760834285-F:unknown;P:biological_process unknown;C:cellular_component unknown;BOAPMFO.I.C.G.H.G.
13.599.497.6At3g28270822453-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMPOAFVO.I.C.G.H.G.
13.499.492.0At3g01060821278unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;BOFPO.I.C.G.H.G.
12.599.352.1At5g52570835334BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2)Converts β-carotene to zeaxanthin via cryptoxanthin.O.I.C.G.H.G.
12.499.3117.6At5g58870836004ftsh9 (FtsH protease 9)encodes an FtsH protease that is localized to the chloroplastO.I.C.G.H.G.
12.099.342.2At1g29430839819auxin-responsive family proteinF:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO.I.C.G.H.G.
11.399.320.8At5g20220832144zinc knuckle (CCHC-type) family proteinF:unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding;P:protein folding;C:unknown;VMFOPBO.I.C.G.H.G.
11.099.240.6At1g75100843847JAC1 (J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1)Contains a J-domain at the C-terminus which is similar to the J-domain of auxilin, a clathrin-uncoating factor in cow, yeast and worm. Arabidopsis contains 6 other proteins similar to auxilin. Expressed in leaves and stems, but not in roots. Localized in the cytoplasm. Required for the chloroplast accumulation response, but not for the avoidance response. No molecular function known.O.I.C.G.H.G.
11.099.229.7At3g19480821482D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putativeF:in 7 functions;P:L-serine biosynthetic process, metabolic process;C:mitochondrion, chloroplast;BOFMPAVO.I.C.G.H.G.
10.899.286.6At1g66330842950senescence-associated family proteinF:unknown;P:senescence;C:unknown;PBO.I.C.G.H.G.
10.799.280.4At3g12320820411unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
10.599.279.6At2g31790817736UDP-glucoronosyl/UDP-glucosyl transferase family proteinF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOFO.I.C.G.H.G.
10.599.279.6At4g26860828793pyridoxal phosphate bindingF:pyridoxal phosphate binding;P:biological_process unknown;C:unknown;OBMFPAO.I.C.G.H.G.
10.599.249.5At1g62960842598ACS10 (ACC SYNTHASE 10)Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.O.I.C.G.H.G.
10.599.226.0At2g39850818572identical protein binding / serine-type endopeptidaseF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:plant-type cell wall;BPOFAMO.I.C.G.H.G.
10.499.270.5At3g55630824729ATDFD (A. THALIANA DHFS-FPGS HOMOLOG D)F:tetrahydrofolylpolyglutamate synthase activity;P:one-carbon compound metabolic process;C:cytosol;BOFMPAO.I.C.G.H.G.
10.399.2102.6At2g04039814937unknown proteinF:molecular_function unknown;P:unknown;C:chloroplast;BOPO.I.C.G.H.G.
10.399.237.7At4g24700828572unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
10.399.224.0At2g19650816484DC1 domain-containing proteinF:unknown;P:intracellular signaling cascade;C:unknown;POMO.I.C.G.H.G.
10.299.258.3At1g07010837211calcineurin-like phosphoesterase family proteinF:hydrolase activity, protein serine/threonine phosphatase activity;P:biological_process unknown;C:peroxisome;OBPFAVO.I.C.G.H.G.
10.199.234.8At2g32870817848meprin and TRAF homology domain-containing protein / MATH domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFO.I.C.G.H.G.
10.099.228.8At5g62140836334unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBOO.I.C.G.H.G.
9.899.1109.0At3g26450822250major latex protein-related / MLP-relatedF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
9.899.119.2At1g31920840082pentatricopeptide (PPR) repeat-containing proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POMFO.I.C.G.H.G.
9.799.1107.6At5g64940836618ATATH13Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins.O.I.C.G.H.G.
9.799.141.7At1g50730841495unknown proteinF:unknown;P:unknown;C:unknown;MOPFO.I.C.G.H.G.
9.599.1251.0At5g49730835036ATFRO6 (FERRIC REDUCTION OXIDASE 6)Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.O.I.C.G.H.G.
9.599.147.1At4g00050828175UNE10 (unfertilized embryo sac 10)F:transcription factor activity, DNA binding;P:double fertilization forming a zygote and endosperm, regulation of transcription;C:nucleus;PMFOO.I.C.G.H.G.
9.499.132.4At1g66130842927oxidoreductase N-terminal domain-containing proteinF:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOFMAPO.I.C.G.H.G.
9.499.131.5At2g41040818703methyltransferase-relatedF:methyltransferase activity;P:metabolic process;C:chloroplast, plastoglobule;BOAPFMO.I.C.G.H.G.
9.299.1285.9At2g26080817149AtGLDP2 (Arabidopsis thaliana glycine decarboxylase P-protein 2)F:glycine dehydrogenase (decarboxylating) activity, ATP binding;P:glycine decarboxylation via glycine cleavage system, glycine metabolic process;C:mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope;OBFAMPO.I.C.G.H.G.
9.299.175.6At2g34620818027mitochondrial transcription termination factor-related / mTERF-relatedF:molecular_function unknown;P:biological_process unknown;C:unknown;POMO.I.C.G.H.G.
9.299.166.6At5g22620832325phosphoglycerate/bisphosphoglycerate mutase family proteinF:catalytic activity;P:metabolic process;C:chloroplast;BOMFPAO.I.C.G.H.G.
9.099.187.8At1g02820839304late embryogenesis abundant 3 family protein / LEA3 family proteinF:molecular_function unknown;P:embryonic development, response to stress;C:unknown;PO.I.C.G.H.G.
9.099.186.5At5g67370836872unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OBPO.I.C.G.H.G.
8.999.058.3At1g52510841682hydrolase, alpha/beta fold family proteinF:hydrolase activity, catalytic activity;P:unknown;C:chloroplast, chloroplast envelope;BOPMFAO.I.C.G.H.G.
8.999.036.8At4g27030828811small conjugating protein ligaseF:small conjugating protein ligase activity;P:regulation of protein metabolic process, post-translational protein modification;C:chloroplast;MOPBVO.I.C.G.H.G.
8.899.0162.0At5g13650831209elongation factor family proteinF:GTP binding, translation elongation factor activity, GTPase activity;P:unknown;C:chloroplast, chloroplast stroma;BOMFPAO.I.C.G.H.G.
8.899.0106.6At1g44446841029CH1 (CHLORINA 1)Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.O.I.C.G.H.G.
8.799.098.2At5g58260835938-Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.O.I.C.G.H.G.
8.699.036.3At1g60590842353polygalacturonase, putative / pectinase, putativeF:polygalacturonase activity;P:carbohydrate metabolic process;C:unknown;FPBMOVAO.I.C.G.H.G.



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